View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15004_low_6 (Length: 340)
Name: NF15004_low_6
Description: NF15004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15004_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 6359141 - 6359447
Alignment:
| Q |
19 |
ctatatccatatataaaaggattgagaaactgcaaatcaattgatgcaaacacgagagacattttgaatttaagctcgtccttgtaattctctctatcta |
118 |
Q |
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| T |
6359141 |
ctatatccatatataaaaggattgagaaactgcaaatcaattgatgcaaacacgagagacgttttgaatttaagctcgtccttgtaattctctctattta |
6359240 |
T |
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| Q |
119 |
ctactgttattatttcgttattaaatatattgtttgataccttcaagctttacagaaatctcgatccaataacctaatcccttcgtttttccactcataa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6359241 |
ctactgttattatttcgttattaaatatattgtttgataccttcaagcattacagaaatctcgatccaataacctaatcccttcgtttttccactcataa |
6359340 |
T |
|
| Q |
219 |
tcattgtacatcagctgcctccaacaacaccagcagcaataccttcgttgttggcaccatcattgtgattgtcatcagcacacaccagtcactcaaattc |
318 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6359341 |
tcgttgtacatcagctgcctccaacaacaccagcagcaataccttcgttgttggcaccatcattgtgattgtcatcagcacacaccagtcactcaaattc |
6359440 |
T |
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| Q |
319 |
acgagta |
325 |
Q |
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|| |||| |
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| T |
6359441 |
acaagta |
6359447 |
T |
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