View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15005_high_13 (Length: 345)
Name: NF15005_high_13
Description: NF15005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15005_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 12 - 345
Target Start/End: Original strand, 4709982 - 4710317
Alignment:
| Q |
12 |
atgaatgttcaagtattaacatgagaatgaatcagagttatgagtatacaattcttatgcattaaaaatctgaaaaatcatgtgcatgatttaaatcaca |
111 |
Q |
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| T |
4709982 |
atgaatgttcaagtattaacatgagaatgaatcagagttatgagtatacaattcttatgcattaaaaatctgaaaaatcatgtgcatgatttaaatcaca |
4710081 |
T |
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| Q |
112 |
ttattaggtggattcgaataatcattttttatcaagttgatttgagtcacattacgtggtcgatttaaattatggctctctgatgaagaaacatgatcca |
211 |
Q |
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| T |
4710082 |
ttattaggtggattcgaataatcactttttatcaagttgatttgagtcacattacgtggtcgatttaaattatgactctctgattaagaaacatgatcca |
4710181 |
T |
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| Q |
212 |
aaaatacaaaggtgatttgaatcgctaactaggttgattcgaatcacaactttttggtttatataggagtgttatgccagtatagatgcacactctaatt |
311 |
Q |
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| T |
4710182 |
aaaatacaaaggtgatttgaatcgctaactaggttgattcgaatcacaactttttggtttatataggagtgtgatgccagtatagatgggcactctaatt |
4710281 |
T |
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| Q |
312 |
tcgtaaatgaataattt--tatccaaatgtataaag |
345 |
Q |
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| T |
4710282 |
tcgtaaatgaataattttgtatccaaatgtataaag |
4710317 |
T |
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