View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15006_low_6 (Length: 237)

Name: NF15006_low_6
Description: NF15006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15006_low_6
NF15006_low_6
[»] chr2 (37 HSPs)
chr2 (1-219)||(2964644-2964862)
chr2 (46-124)||(5902481-5902557)
chr2 (50-141)||(39622017-39622108)
chr2 (47-133)||(28803451-28803537)
chr2 (46-135)||(4350752-4350841)
chr2 (48-136)||(13866942-13867030)
chr2 (23-135)||(15120222-15120334)
chr2 (16-111)||(787364-787459)
chr2 (17-74)||(1647269-1647326)
chr2 (18-119)||(35485951-35486052)
chr2 (17-133)||(40158751-40158867)
chr2 (18-134)||(43456627-43456743)
chr2 (20-142)||(44438753-44438873)
chr2 (49-135)||(12140597-12140683)
chr2 (46-140)||(12313087-12313181)
chr2 (17-135)||(43529777-43529895)
chr2 (46-103)||(1801730-1801787)
chr2 (46-135)||(8017496-8017585)
chr2 (98-142)||(6772445-6772489)
chr2 (97-141)||(10563473-10563517)
chr2 (17-135)||(40837356-40837472)
chr2 (107-142)||(26202151-26202186)
chr2 (17-100)||(28039286-28039369)
chr2 (47-122)||(29430821-29430896)
chr2 (50-136)||(22878164-22878250)
chr2 (17-83)||(28677630-28677696)
chr2 (17-95)||(38809359-38809437)
chr2 (106-143)||(9478079-9478116)
chr2 (62-135)||(39983423-39983496)
chr2 (17-70)||(41817201-41817254)
chr2 (62-135)||(43259913-43259986)
chr2 (18-95)||(43530070-43530147)
chr2 (47-83)||(1494417-1494453)
chr2 (45-133)||(6209580-6209668)
chr2 (97-137)||(9886418-9886458)
chr2 (17-65)||(29316764-29316812)
chr2 (57-133)||(42852623-42852699)
[»] chr1 (36 HSPs)
chr1 (17-135)||(33723301-33723419)
chr1 (17-140)||(7217988-7218111)
chr1 (17-135)||(6292526-6292643)
chr1 (23-142)||(24460313-24460438)
chr1 (17-123)||(31517671-31517777)
chr1 (46-135)||(43420320-43420409)
chr1 (51-135)||(4033936-4034020)
chr1 (47-135)||(34536221-34536309)
chr1 (16-122)||(35925722-35925829)
chr1 (17-124)||(37593614-37593721)
chr1 (17-141)||(10199321-10199445)
chr1 (49-133)||(51929383-51929467)
chr1 (17-132)||(7136920-7137035)
chr1 (47-122)||(49691985-49692059)
chr1 (46-124)||(38170620-38170698)
chr1 (17-102)||(4576838-4576923)
chr1 (52-133)||(5157140-5157221)
chr1 (60-139)||(5886907-5886982)
chr1 (19-80)||(37811887-37811948)
chr1 (47-123)||(24279812-24279888)
chr1 (17-73)||(31118076-31118132)
chr1 (46-133)||(4757400-4757487)
chr1 (47-142)||(23373225-23373320)
chr1 (48-123)||(28837284-28837358)
chr1 (54-109)||(43371836-43371891)
chr1 (26-76)||(14332024-14332074)
chr1 (93-135)||(52013996-52014038)
chr1 (50-123)||(2295163-2295235)
chr1 (97-142)||(4276562-4276607)
chr1 (23-83)||(4481969-4482029)
chr1 (24-136)||(4549888-4550000)
chr1 (17-129)||(10280682-10280794)
chr1 (46-138)||(15489020-15489112)
chr1 (17-81)||(25479614-25479678)
chr1 (47-135)||(32515360-32515448)
chr1 (54-142)||(36070251-36070339)
[»] chr7 (26 HSPs)
chr7 (49-138)||(23214920-23215009)
chr7 (16-141)||(33894659-33894784)
chr7 (22-123)||(36598287-36598388)
chr7 (17-133)||(28727684-28727800)
chr7 (46-104)||(36537970-36538028)
chr7 (46-123)||(8094368-8094445)
chr7 (18-135)||(30535597-30535714)
chr7 (49-133)||(3836604-3836688)
chr7 (17-135)||(22387815-22387933)
chr7 (89-141)||(17988946-17988998)
chr7 (65-132)||(529443-529510)
chr7 (46-141)||(9038173-9038268)
chr7 (57-135)||(6977489-6977567)
chr7 (54-124)||(22759231-22759301)
chr7 (46-135)||(25511688-25511778)
chr7 (46-124)||(25670516-25670594)
chr7 (90-136)||(30751625-30751671)
chr7 (85-135)||(40598404-40598454)
chr7 (24-74)||(43219624-43219674)
chr7 (54-102)||(13960675-13960723)
chr7 (17-141)||(25596066-25596189)
chr7 (103-135)||(31744921-31744953)
chr7 (97-141)||(33266399-33266443)
chr7 (105-145)||(34083517-34083557)
chr7 (25-73)||(43219785-43219833)
chr7 (80-124)||(46055914-46055958)
[»] chr8 (35 HSPs)
chr8 (46-140)||(16162822-16162916)
chr8 (17-142)||(7646239-7646364)
chr8 (17-141)||(9700034-9700158)
chr8 (17-130)||(6950355-6950468)
chr8 (46-141)||(2487921-2488016)
chr8 (46-129)||(39881646-39881729)
chr8 (76-142)||(14926894-14926960)
chr8 (47-138)||(34770931-34771022)
chr8 (17-139)||(34849136-34849259)
chr8 (36-122)||(2213460-2213546)
chr8 (17-75)||(10383918-10383976)
chr8 (66-135)||(10075472-10075541)
chr8 (17-135)||(12851209-12851329)
chr8 (46-135)||(37461204-37461292)
chr8 (55-124)||(39389106-39389175)
chr8 (17-135)||(42215219-42215343)
chr8 (49-122)||(45098905-45098978)
chr8 (93-133)||(2493045-2493085)
chr8 (22-74)||(3254263-3254315)
chr8 (54-122)||(7918713-7918781)
chr8 (98-142)||(31168115-31168159)
chr8 (23-135)||(43368619-43368731)
chr8 (85-140)||(10437984-10438039)
chr8 (78-140)||(7714336-7714398)
chr8 (17-71)||(9835883-9835937)
chr8 (49-83)||(10120822-10120856)
chr8 (47-113)||(11569398-11569464)
chr8 (79-129)||(27465446-27465496)
chr8 (97-135)||(42893409-42893447)
chr8 (17-123)||(43504784-43504890)
chr8 (17-135)||(44236742-44236860)
chr8 (85-142)||(1117408-1117465)
chr8 (76-133)||(1561369-1561426)
chr8 (78-135)||(1892143-1892200)
chr8 (17-74)||(2458546-2458603)
[»] chr3 (30 HSPs)
chr3 (46-140)||(44014712-44014806)
chr3 (46-135)||(41164909-41164998)
chr3 (24-135)||(45541611-45541722)
chr3 (51-112)||(3776332-3776393)
chr3 (17-135)||(21574523-21574643)
chr3 (47-136)||(21872213-21872302)
chr3 (17-74)||(49465645-49465702)
chr3 (54-135)||(50211805-50211886)
chr3 (17-145)||(20210837-20210965)
chr3 (46-145)||(2100088-2100187)
chr3 (48-122)||(19679260-19679334)
chr3 (46-112)||(50015948-50016014)
chr3 (46-123)||(2304202-2304279)
chr3 (47-135)||(2413598-2413686)
chr3 (17-73)||(5391912-5391968)
chr3 (49-133)||(20194954-20195038)
chr3 (68-124)||(45783329-45783385)
chr3 (25-140)||(30573829-30573943)
chr3 (17-135)||(50952366-50952485)
chr3 (16-83)||(53952080-53952147)
chr3 (17-95)||(14548680-14548758)
chr3 (97-135)||(24684741-24684779)
chr3 (65-127)||(25925810-25925872)
chr3 (24-74)||(39723220-39723270)
chr3 (90-135)||(40240740-40240785)
chr3 (21-130)||(41644369-41644478)
chr3 (19-71)||(27290884-27290936)
chr3 (16-68)||(38318992-38319044)
chr3 (25-73)||(39723381-39723429)
chr3 (92-128)||(39769645-39769681)
[»] chr5 (31 HSPs)
chr5 (17-122)||(37611147-37611252)
chr5 (17-122)||(37787877-37787982)
chr5 (16-135)||(499650-499769)
chr5 (17-135)||(11297115-11297233)
chr5 (17-131)||(38728435-38728549)
chr5 (17-130)||(8089969-8090082)
chr5 (17-135)||(17368709-17368823)
chr5 (17-73)||(3977341-3977397)
chr5 (46-142)||(11714776-11714872)
chr5 (47-122)||(11095427-11095502)
chr5 (46-137)||(18857316-18857406)
chr5 (17-123)||(10125649-10125755)
chr5 (17-135)||(25720336-25720454)
chr5 (85-134)||(13508541-13508590)
chr5 (65-134)||(21782576-21782645)
chr5 (17-122)||(41112830-41112935)
chr5 (54-142)||(14599284-14599372)
chr5 (62-125)||(12407659-12407722)
chr5 (47-134)||(26516470-26516557)
chr5 (16-147)||(36318806-36318937)
chr5 (17-88)||(37526165-37526236)
chr5 (17-88)||(37690602-37690673)
chr5 (49-123)||(2568723-2568797)
chr5 (53-135)||(11104974-11105056)
chr5 (17-123)||(17258814-17258920)
chr5 (46-135)||(12459920-12460009)
chr5 (90-135)||(17369309-17369354)
chr5 (17-70)||(36638780-36638833)
chr5 (18-134)||(37954720-37954837)
chr5 (51-103)||(4273328-4273380)
chr5 (97-141)||(39594920-39594964)
[»] chr4 (35 HSPs)
chr4 (46-135)||(7367973-7368062)
chr4 (52-135)||(47399553-47399636)
chr4 (45-118)||(46247266-46247339)
chr4 (17-129)||(45128235-45128347)
chr4 (18-129)||(46090738-46090850)
chr4 (18-129)||(2996607-2996718)
chr4 (16-95)||(48719350-48719429)
chr4 (17-135)||(27123271-27123389)
chr4 (49-135)||(28615400-28615485)
chr4 (17-122)||(30207503-30207608)
chr4 (45-118)||(46013249-46013322)
chr4 (17-140)||(28300213-28300336)
chr4 (27-100)||(4071921-4071994)
chr4 (52-121)||(18628486-18628555)
chr4 (17-133)||(1137745-1137861)
chr4 (65-141)||(29126176-29126252)
chr4 (18-73)||(43886112-43886167)
chr4 (16-67)||(44249317-44249368)
chr4 (46-145)||(52172787-52172886)
chr4 (85-135)||(18512434-18512484)
chr4 (47-133)||(24160450-24160536)
chr4 (45-135)||(31708768-31708858)
chr4 (91-137)||(46187826-46187872)
chr4 (20-98)||(50799986-50800064)
chr4 (51-137)||(55870259-55870345)
chr4 (90-135)||(24193638-24193683)
chr4 (47-124)||(24370881-24370958)
chr4 (50-135)||(39178185-39178270)
chr4 (46-123)||(42641570-42641647)
chr4 (46-94)||(1554968-1555016)
chr4 (47-135)||(6428081-6428169)
chr4 (46-138)||(10172124-10172216)
chr4 (17-73)||(20936210-20936266)
chr4 (52-112)||(22523748-22523808)
chr4 (18-74)||(22662227-22662283)
[»] chr6 (23 HSPs)
chr6 (17-101)||(32171336-32171420)
chr6 (18-109)||(32577931-32578022)
chr6 (48-138)||(2455874-2455964)
chr6 (17-135)||(2460070-2460188)
chr6 (46-133)||(26559160-26559247)
chr6 (46-100)||(769200-769254)
chr6 (46-136)||(2263254-2263344)
chr6 (17-74)||(31624123-31624180)
chr6 (17-138)||(34403888-34404009)
chr6 (17-140)||(33080492-33080615)
chr6 (24-74)||(696642-696692)
chr6 (17-138)||(8420112-8420234)
chr6 (17-83)||(13908496-13908562)
chr6 (46-136)||(33089568-33089658)
chr6 (90-135)||(13908346-13908391)
chr6 (46-103)||(24838704-24838761)
chr6 (23-124)||(33911212-33911313)
chr6 (25-73)||(696483-696531)
chr6 (17-101)||(725608-725692)
chr6 (46-142)||(740798-740894)
chr6 (91-135)||(4516066-4516110)
chr6 (85-133)||(12111068-12111116)
chr6 (47-95)||(33116647-33116695)
[»] scaffold0608 (1 HSPs)
scaffold0608 (23-83)||(9608-9668)


Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 2964862 - 2964644
Alignment:
Q  1 aaactattatgaatttttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2964862 aaactattatgaatttttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttat 2964763  T
Q  101 gccggtagataagttcaaataagttaatccaaacatgccctaggtattggttttctgagttttaaaaatgaaaaaggtttgagcatctattgacttatta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2964762 gccggtagataagttcaaataagttaatccaaacatgccctaggtattggttttctgagttttaaaaatgaaaaagttttgagcatctattgacttatta 2964663  T
Q  201 catggtaggttaaatgaaa 219  Q
    |||||||||||||||||||    
T  2964662 catggtaggttaaatgaaa 2964644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 5902557 - 5902481
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    |||||||||||||||||||||||||||||   |||||| |||| ||||||||||||||  |||||||||||||||||||    
T  5902557 aacatgtcataagctgttttcataagttcttccaaacagtctcacaagtgtttatgcc--tagataagttcaaataagt 5902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 39622017 - 39622108
Alignment:
Q  50 tgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    ||||||||| ||||||||||||||| |||||||| | ||||||||| |||| |  |||||||||||||||||||| |||||| ||| |||||    
T  39622017 tgtcataagttgttttcataagttctctcaaacagtgtcgcaagtgcttatacaagtagataagttcaaataagtaaatccagacaggccct 39622108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 28803537 - 28803451
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    |||||||||||| ||||| |||| |||| |||||||| |||| || ||| ||||||||||||||||| |||||||||| ||||||||    
T  28803537 acatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaa 28803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 4350752 - 4350841
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||||||||||||||||||| |||||||| ||||  ||||| ||||| | ||||| ||| |||||||||  ||||||||||    
T  4350752 aacatgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtagagaagctcaaataagccaatccaaaca 4350841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 13866942 - 13867030
Alignment:
Q  48 catgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacat 136  Q
    ||||||||| | ||||||| ||||||| |||||||| |||| |||||||||||| | ||||||||| ||||||| || |||||||||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaacat 13867030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 15120222 - 15120334
Alignment:
Q  23 aaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    ||||||||| |||| ||||||  ||||||||||||| ||||| |||||| || | ||||||   || ||| |||||||||  ||||||||||||||||||    
T  15120222 aaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataa 15120321  T
Q  123 gttaatccaaaca 135  Q
    || ||||||||||    
T  15120322 gtcaatccaaaca 15120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 787364 - 787459
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagata 111  Q
    |||||||| |||||||||||| |||| |   |||||||||||||||||||||||||||| | |||||| | || |||||| ||||||| |||||||    
T  787364 tttatggagataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagata 787459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 1647269 - 1647326
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    |||||||||||||||||||| |||| |  | |||||||||||||||||||||||||||    
T  1647269 ttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagttc 1647326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 35485951 - 35486052
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttca 117  Q
    ||||||||| ||||||||| |||| |  ||||| ||||||| || |||  ||||||| |||||||| |||| |||||  ||||| |||||||||||||||    
T  35485951 tatggaaatgagctgaaaacagcttatgaacatatcataagttgctttagtaagttctctcaaacagtctcacaagttcttatgtcggtagataagttca 35486050  T
Q  118 aa 119  Q
    ||    
T  35486051 aa 35486052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 40158751 - 40158867
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| || ||||||||||| | || |  ||||||||||||||||||||||||||||| | ||| || |||| |||||  ||||| | ||||||| | ||    
T  40158751 ttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtctcacaagttcttatgtcagtagatatgctc 40158850  T
Q  117 aaataagttaatccaaa 133  Q
    |||||||  ||||||||    
T  40158851 aaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 43456743 - 43456627
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttca 117  Q
    ||||||||||||||||||| || | |   ||||||||| || |||||||| ||| ||  ||||||| |||  ||||||||||||   ||| |||||||||    
T  43456743 tatggaaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttatgtgagtaaataagttca 43456644  T
Q  118 aataagttaatccaaac 134  Q
    ||||||| |||||||||    
T  43456643 aataagtaaatccaaac 43456627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 44438873 - 44438753
Alignment:
Q  20 tggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaa 119  Q
    ||||||||||||||||| || | |  |||||||||||||||||||||| | |||| | || ||| |||  |||||| ||||| | ||||||||| |||||    
T  44438873 tggaaataagctgaaaacaggttatgaacatgtcataagctgttttcacatgttcccccagacagtct--caagtgattatgtctgtagataagctcaaa 44438776  T
Q  120 taagttaatccaaacatgcccta 142  Q
    | ||| ||| |||||| ||||||    
T  44438775 tcagtcaattcaaacaggcccta 44438753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 12140597 - 12140683
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||| ||||||||||||||| |||||||  | ||| ||||||||||| | ||||||||| | || ||||  ||||||||||    
T  12140597 atgtcataagttgttttcataagttctctcaaactatttcgtaagtgtttatgtcagtagataaggttaagtaagacaatccaaaca 12140683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 12313181 - 12313087
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccc 140  Q
    |||||| |||||||||||||||||| ||| | |||||| |||| |||||| ||||||  || | |||| ||||||||| |||| |||||| ||||    
T  12313181 aacatggcataagctgttttcataaattctcccaaacaatctcacaagtgcttatgctagtgggtaagatcaaataagctaatacaaacaggccc 12313087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 43529895 - 43529777
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||| ||||||| |||| |  |||||| |||||||||||||||||| ||| | |||||| | ||  ||||| |||| ||  |||||||| ||    
T  43529895 ttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttataccaatagataagctc 43529796  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||| ||| ||||||    
T  43529795 aaataagtcaattcaaaca 43529777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 1801730 - 1801787
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgcc 103  Q
    ||||||||||||||||||||||||||||| | |||||| | || |||||| |||||||    
T  1801730 aacatgtcataagctgttttcataagttctcccaaacaatatcacaagtgcttatgcc 1801787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 8017496 - 8017585
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||| ||||||||||||||||||||||| | |||| | || | |||||| ||||| |  |||||||  |||||||||| ||||||||||    
T  8017496 aacatatcataagctgttttcataagttctcccaaataatcgcacaagtgcttatgtcaatagataacctcaaataagtcaatccaaaca 8017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 6772489 - 6772445
Alignment:
Q  98 tatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||    
T  6772489 tatgcctgtagataagctcaaataagtcaatccaaacatgcccta 6772445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10563517 - 10563473
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||    
T  10563517 ttatgctggtagataagttcaaataagtcaatccaaacaggccct 10563473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 40837472 - 40837356
Alignment:
Q  17 ttatggaaataagctgaaaaaagcta--accaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagt 114  Q
    |||||||||||||||||||| |||||    ||| |||||||||| |||||||||||  || | |||||| ||||    ||||||||| | |||||||||     
T  40837472 ttatggaaataagctgaaaatagctatggacaatatgtcataagatgttttcataaactctcccaaacagtctc----gtgtttatgtcagtagataagc 40837377  T
Q  115 tcaaataagttaatccaaaca 135  Q
    |||||||||  ||||||||||    
T  40837376 tcaaataagccaatccaaaca 40837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 142
Target Start/End: Original strand, 26202151 - 26202186
Alignment:
Q  107 agataagttcaaataagttaatccaaacatgcccta 142  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26202151 agataagttcaaataagttaatccaaacaggcccta 26202186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 28039369 - 28039286
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttat 100  Q
    |||||||||||||||||||| |||| |  |||| |||||||  ||||||||||| ||||||| |||| || | |||||| ||||    
T  28039369 ttatggaaataagctgaaaacagcttatgaacaagtcataacttgttttcataaattcactcgaacagtcacacaagtgcttat 28039286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 29430821 - 29430896
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    |||||||||||||| |||||||||||||   |||| | || | |||||||||||| | ||||||||| ||||||||    
T  29430821 acatgtcataagctattttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 22878164 - 22878250
Alignment:
Q  50 tgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacat 136  Q
    ||||||||  ||||| |||||| || | |||||| |||| |||||| ||||| | || |||||| |||||||||| |||||||||||    
T  22878164 tgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaacat 22878250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 28677696 - 28677630
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaaca 83  Q
    |||||||||||||| ||||| | || |  || |||||||||||||||||||||||||| | ||||||    
T  28677696 ttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaaca 28677630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 38809359 - 38809437
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtg 95  Q
    ||||||||||||| |||||| || | |  |||||||||||||||| ||| |||||||| | |||||||| || ||||||    
T  38809359 ttatggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctcccaaacattttcacaagtg 38809437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 9478079 - 9478116
Alignment:
Q  106 tagataagttcaaataagttaatccaaacatgccctag 143  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  9478079 tagataagttcaaataagtcaatcccaacatgccctag 9478116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 39983423 - 39983496
Alignment:
Q  62 ttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||| |||||||| ||||| || |||| ||||  |||||||||||||||||  |||||||||  ||||||||||    
T  39983423 tttttataagttctctcaatcagtctcacaaggatttatgccggtagataacctcaaataagcaaatccaaaca 39983496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 41817201 - 41817254
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataa 70  Q
    |||||||||||||||||||| |  | | |||||||||||||| |||||||||||    
T  41817201 ttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataa 41817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 43259913 - 43259986
Alignment:
Q  62 ttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||  | | |||||| || |||||| ||||||  |||||||||||||||||||  ||||||||||    
T  43259913 ttttcataagttttcccgaacattgtcacaagtgcttatgctagtagataagttcaaataagccaatccaaaca 43259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 43530147 - 43530070
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtg 95  Q
    |||||||||||| |||||| ||||    |||||||||||| |||||||||||||||| | ||| || |||| ||||||    
T  43530147 tatggaaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagttctcccaagcactctcacaagtg 43530070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1494453 - 1494417
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaaca 83  Q
    ||||||||||||||||||||||||| || ||||||||    
T  1494453 acatgtcataagctgttttcataagctctctcaaaca 1494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 6209668 - 6209580
Alignment:
Q  45 caacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||| || | ||||| ||||||||||||| || ||| ||||  ||||| |||| | | |||||||| |||||||||| ||||||||    
T  6209668 caacatgccagaggctgtgttcataagttcacccagacagtctcaaaagtgcttatacagctagataagctcaaataagtaaatccaaa 6209580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 9886418 - 9886458
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaacatg 137  Q
    ||||||| |||||||| |||||||||||| |||||||||||    
T  9886418 ttatgccagtagataaattcaaataagttgatccaaacatg 9886458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 29316812 - 29316764
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgtttt 65  Q
    |||||||||||||||||||| | || |  ||||||||||||||||||||    
T  29316812 ttatggaaataagctgaaaagaacttatgaacatgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 42852699 - 42852623
Alignment:
Q  57 agctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||||||||| | ||   |||||| |||| |||||| ||||||| | |||||||||||||||||  ||||||||    
T  42852699 agctgttttcataggctcttccaaacagtctcacaagtgcttatgccagcagataagttcaaataagcaaatccaaa 42852623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 33723419 - 33723301
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| | || |  |||||||||| |||||||| ||||||||  | ||| || |||| ||||||||||||   ||||||||||||    
T  33723419 ttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataagttc 33723320  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||| ||||||||||    
T  33723319 aaataagtcaatccaaaca 33723301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 7218111 - 7217988
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| ||||||| |||||| ||||    ||| |||||||||  ||||||| ||| || | |||||| ||||  ||||||||||||||||||||||| |     
T  7218111 ttatgaaaataagttgaaaacagcttgtgaacgtgtcataagtcgttttcacaagctcccccaaacaatctcagaagtgtttatgccggtagataagctt 7218012  T
Q  117 aaataagttaatccaaacatgccc 140  Q
    |||||||| |||||||||||||||    
T  7218011 aaataagtcaatccaaacatgccc 7217988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 6292526 - 6292643
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| |||| |  |||||||||||||||||||| | || ||| | |||||| ||||  ||||| ||||| | ||||||||| ||    
T  6292526 ttatgaaaataagctgaaaacagcttatgaacatgtcataagctgtttt-aaaaattctcccaaacaatctcaaaagtgcttatgtcagtagataagctc 6292624  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||| ||||||||||    
T  6292625 aaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 24460438 - 24460313
Alignment:
Q  23 aaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc------actcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||| ||| |||| |  ||||||||||||||| ||||||||| |||      ||||||||| |||| |||||| | ||| | ||||||||||||    
T  24460438 aaataagctggaaacagcttatgaacatgtcataagctattttcataatttctctcagactcaaacagtctcacaagtgctcatgtcagtagataagttc 24460339  T
Q  117 aaataagttaatccaaacatgcccta 142  Q
    |||||||| |||||||||| ||||||    
T  24460338 aaataagtcaatccaaacaggcccta 24460313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 31517777 - 31517671
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| |||| |  |||||||||| || |||||| |||||||| | |||||| |||| |||||| ||||||| ||| ||||| ||    
T  31517777 ttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataagctc 31517678  T
Q  117 aaataag 123  Q
    |||||||    
T  31517677 aaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 43420320 - 43420409
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||||||||| |||||| || | ||| || |||| |||||||||||| | ||||||||| ||||||||| |||||| ||||    
T  43420320 aacatgtcataagctgtttccataagatctcacaagcagtctcacaagtgtttatgtctgtagataagctcaaataagctaatcctaaca 43420409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 4034020 - 4033936
Alignment:
Q  51 gtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||| | |||||||||| || |||||||| |||| |||||||||||||| ||||| |||||||||| ||| ||| ||||||    
T  4034020 gtcataagttattttcataagctctctcaaacaatctcacaagtgtttatgccagtagacaagttcaaatgagtcaatgcaaaca 4033936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 34536221 - 34536309
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||||||||||||||||    |||||||| |||| |||||||||||| |  |||||| |||||||||||| | ||||||||    
T  34536221 acatgtcataagctgttttcataagccatctcaaacagtctcacaagtgtttatgtcaatagatacgttcaaataagtcattccaaaca 34536309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 35925722 - 35925829
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt-cactcaaacattctcgcaagtgtttatgccggtagataagt 114  Q
    |||||||||||||| |||||| |||| |  |||||||||||||||||||||||||||| | | || ||| |||| |||| | ||||||| |||| ||||     
T  35925722 tttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttcctcccagacagtctctcaagcgcttatgccagtagctaagc 35925821  T
Q  115 tcaaataa 122  Q
    ||||||||    
T  35925822 tcaaataa 35925829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 37593721 - 37593614
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| |||| |  ||||||||||||| ||| ||||| ||||  | |||||| |||  |||||||||||||| ||| ||||| ||    
T  37593721 ttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtctaacaagtgtttatgccagtatataagctc 37593622  T
Q  117 aaataagt 124  Q
    ||||||||    
T  37593621 aaataagt 37593614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 10199445 - 10199321
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| | || |  ||||||||||||||| ||||||| ||||| | |||| | | || |||||| |||||   ||||||||| ||    
T  10199445 ttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagataagctc 10199346  T
Q  117 aaataagttaatccaaacatgccct 141  Q
    |||||||| ||||||| || |||||    
T  10199345 aaataagtcaatccaaccaggccct 10199321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 51929467 - 51929383
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    |||||||||||||||||||||||||| || ||||| | || || ||| ||||| | ||||||||| ||||| |||| ||||||||    
T  51929467 atgtcataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 7137035 - 7136920
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| | || |  || |||||||||||  |||||||||||||  ||||||  | |  |||||||||||| ||| ||||||  ||    
T  7137035 ttatgaaaataagctgaaaataacttatgaatatgtcataagcgattttcataagttctttcaaactctttaacaagtgtttatgtcgggagataaactc 7136936  T
Q  117 aaataagttaatccaa 132  Q
    ||||||||||||||||    
T  7136935 aaataagttaatccaa 7136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 49692059 - 49691985
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    |||||||||||||| ||||||||||||| |||||||| |||| |||||  ||||| |  |||||||||||||||||    
T  49692059 acatgtcataagctattttcataagttctctcaaacagtctcacaagttcttatg-cattagataagttcaaataa 49691985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 38170698 - 38170620
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    |||||||||||||||||||||||||| || | ||| || |||| |||||||| ||||| ||| ||||| | ||||||||    
T  38170698 aacatgtcataagctgttttcataagctctcccaagcagtctcacaagtgttcatgccagtatataaggttaaataagt 38170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 4576838 - 4576923
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgc 102  Q
    ||||| |||||||||||| | | || |  |||||||||||| || ||||||||||||  |||||||| || |||||||||||||||    
T  4576838 ttatgaaaataagctgaacacaacttataaacatgtcataaactattttcataagttgtctcaaacagtcccgcaagtgtttatgc 4576923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 5157140 - 5157221
Alignment:
Q  52 tcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||| |||||  ||||| || | |||||| | || |||||||||||| | |||||||||||||||||||| ||||||||    
T  5157140 tcataagttgtttctataagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaa 5157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 5886982 - 5886907
Alignment:
Q  60 tgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcc 139  Q
    ||||||||||||||| | |||||| |||||||| || |||||||   ||||||| |||||||||| ||||||||||||||    
T  5886982 tgttttcataagttctc-caaacagtctcgcaattgcttatgcc---agataagctcaaataagtcaatccaaacatgcc 5886907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 37811887 - 37811948
Alignment:
Q  19 atggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaa 80  Q
    ||||||||||| |||||| || | |  ||||||||||||||||||||||||||||| |||||    
T  37811887 atggaaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctctcaa 37811948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 24279812 - 24279888
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    |||||||||||| ||||| |||| |||| | ||| || |||| |||||||||||||  ||| |||||||||||||||    
T  24279812 acatgtcataagttgtttccataggttcccccaatcagtctcacaagtgtttatgctagtaaataagttcaaataag 24279888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 31118076 - 31118132
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    |||||||||||||||||||| | || |  ||||||||||||| ||||||||||||||    
T  31118076 ttatggaaataagctgaaaacaactgatgaacatgtcataagatgttttcataagtt 31118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 4757400 - 4757487
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||||||||| |||||||||||||||   ||||   |||| |||||||||||| |  |||||||| |||||||||| || |||||    
T  4757400 aacatgtcataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 23373320 - 23373225
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    |||||||||||| |||||  ||||| || | |||||| |||| |||||| ||||  | ||||| |||||||||||||| ||| |||||| ||||||    
T  23373320 acatgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaattcaaacaggcccta 23373225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 28837358 - 28837284
Alignment:
Q  48 catgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||||||||||||||||| |||| || || ||||| |||| |||||| ||||| | ||||||||| |||||||||    
T  28837358 catgtcataagctgttttcgtaag-tctcttaaacagtctctcaagtgcttatgtcagtagataagctcaaataag 28837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 43371891 - 43371836
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtaga 109  Q
    |||||||||||||||||| || |||||||| |||| |||||| ||||||| |||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcacaagtgcttatgccagtaga 43371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 14332024 - 14332074
Alignment:
Q  26 taagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcac 76  Q
    ||||||||||||||||||| ||  ||||||||  |||||||||||||||||    
T  14332024 taagctgaaaaaagctaacgaaagtgtcataatttgttttcataagttcac 14332074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 52013996 - 52014038
Alignment:
Q  93 gtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||  |||||||| |||||||||||||||||||||    
T  52013996 gtgtttatgccaatagataagctcaaataagttaatccaaaca 52014038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 2295163 - 2295235
Alignment:
Q  50 tgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||||||||||||||||||||||| | |||||| |||| |||    ||||||| ||||||||| |||||||||    
T  2295163 tgtcataagctgttttcataagttctcccaaacagtctcacaa-aacttatgccagtagataagctcaaataag 2295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 4276607 - 4276562
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    ||||||| | ||||||| |||||||||| |||||||||||||||||    
T  4276607 ttatgccagaagataagctcaaataagtaaatccaaacatgcccta 4276562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 4481969 - 4482029
Alignment:
Q  23 aaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaaca 83  Q
    ||||||||| |||| |||| |  ||||||| ||||| ||||||||||||||| ||||||||    
T  4481969 aaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaaca 4482029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 4549888 - 4550000
Alignment:
Q  24 aataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||||||||||| | || |  |||||||||||| ||||||||| |||||| | ||||||  ||  || ||||||||  ||||  ||||| |||||||||    
T  4549888 aataagctgaaaacaacttatgaacatgtcataatctgttttcagaagttctcccaaacagacttacaggtgtttataacggtgaataagctcaaataag 4549987  T
Q  124 ttaatccaaacat 136  Q
      |||||||||||    
T  4549988 acaatccaaacat 4550000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 10280682 - 10280794
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| ||||||||||| ||||||| |  ||||||  ||||| ||||||||||||||| |   |||| | || ||| || |||||||  |||||| ||||    
T  10280682 ttatgaaaataagctgacaaaagcttatgaacatgaaataagttgttttcataagttctcctgaacagtgtcacaattgcttatgccaatagataggttc 10280781  T
Q  117 aaataagttaatc 129  Q
    |||||||| ||||    
T  10280782 aaataagtcaatc 10280794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 15489020 - 15489112
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgc 138  Q
    ||||||||||| ||||||| |||||| || ||||||||||||  |||||| | ||| | |||||  || |||||||||  ||| |||||||||    
T  15489020 aacatgtcatacgctgtttacataagctctctcaaacattcttacaagtgctaatgactgtagaagagctcaaataagccaatgcaaacatgc 15489112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 25479614 - 25479678
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaa 81  Q
    ||||| |||||||||||||| | ||||  |||||||||||| || |||||||||| |||| ||||    
T  25479614 ttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataagctcacacaaa 25479678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 32515448 - 32515360
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||| ||||||| |||||| || | |||||| |||| |||||| |||||   ||||||||  ||||||| | |||||||||||    
T  32515448 acatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaaca 32515360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 36070251 - 36070339
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    ||||| ||||||||||||||| |  ||||| |||| |||||| ||||||| | ||||||  ||||||||   |||||||||||| ||||    
T  36070251 ataagttgttttcataagttctcctaaacagtctcacaagtgcttatgccagaagataatatcaaataaaccaatccaaacatgaccta 36070339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 23214920 - 23215009
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgc 138  Q
    |||||||||| ||||||||||| ||| |||||||| ||||  ||||||||||||  ||||||||| |||||||||| |||||||||||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaacatgc 23215009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 33894659 - 33894784
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagtt 115  Q
    ||||| ||||||||||||||| | || |   |||||||||| |||||||||||||| || | |||||| |||| |||||| ||||| |  | |||||| |    
T  33894659 tttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgtcatttgataagct 33894758  T
Q  116 caaataagttaatccaaacatgccct 141  Q
    |||||||| |||||||||||||||||    
T  33894759 caaataagctaatccaaacatgccct 33894784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 36598388 - 36598287
Alignment:
Q  22 gaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaata 121  Q
    ||||||||||||||| |||| |  ||||||||||||| ||||| |||||| || |||||||| |||| ||| || ||||| | |||| ||||||||||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaattgcttatgtcagtagttaagttcaaata 36598289  T
Q  122 ag 123  Q
    ||    
T  36598288 ag 36598287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 28727800 - 28727684
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||| ||||||||||||||| | |  || |||||||||||||| |||| |||||| || |||||||| ||||||||||  ||| | |   ||||||| ||    
T  28727800 ttatagaaataagctgaaaacaacatacgaacatgtcataagccgtttccataagctctctcaaacagtctcgcaagttcttaggtcaaaagataagctc 28727701  T
Q  117 aaataagttaatccaaa 133  Q
    |||||||||||||||||    
T  28727700 aaataagttaatccaaa 28727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 36537970 - 36538028
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccg 104  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||| |||||||||||||||    
T  36537970 aacatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatgccg 36538028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 8094368 - 8094445
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    |||||||||||||||||||||||||  || |||||| | |||| |||||| ||||||  ||||||||| |||||||||    
T  8094368 aacatgtcataagctgttttcataaaatctctcaaatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 30535597 - 30535714
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttca 117  Q
    |||| |||||| ||||||| |||| || ||||| ||||||| ||||||||||||||| |  ||||| |||| |||||||||||| | ||| || |  |||    
T  30535597 tatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctctcaagtgtttatgtcagtaaattaactca 30535696  T
Q  118 aataagttaatccaaaca 135  Q
    ||||||| ||| ||||||    
T  30535697 aataagtcaattcaaaca 30535714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 3836688 - 3836604
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    |||||||||||| ||||||||||||| | |||||| | || |||||| ||| ||| ||||||||| |||||||||  ||||||||    
T  3836688 atgtcataagctattttcataagttctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaa 3836604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 22387933 - 22387815
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||| | |||| || | |  |||||| |||||| |||||||||||| || | |||||| |||| || ||||||||| | ||| ||||||||    
T  22387933 ttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatgtcagtaaataagttc 22387834  T
Q  117 aaataagttaatccaaaca 135  Q
     | ||||| ||||||||||    
T  22387833 tagtaagtcaatccaaaca 22387815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 17988998 - 17988946
Alignment:
Q  89 gcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    ||||||| ||||||  ||||||||| ||||||||||||||||||||| |||||    
T  17988998 gcaagtgattatgcgagtagataagctcaaataagttaatccaaacaagccct 17988946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 529443 - 529510
Alignment:
Q  65 tcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaa 132  Q
    |||||||||| | |||| |  ||| |||||||||||||| ||||||||| |||||||||| |||||||    
T  529443 tcataagttctcccaaatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 9038173 - 9038268
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    |||||||||||||||||||| ||||||||     |||||||||  ||||| ||||||| ||||||| |||||| ||||  ||| |||||| |||||    
T  9038173 aacatgtcataagctgtttttataagttcttctgaacattctcataagtgcttatgcctgtagataggttcaactaagccaattcaaacaagccct 9038268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 6977489 - 6977567
Alignment:
Q  57 agctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||| |||||| ||||||||||| |||| ||| || |||||||  |||||||  || ||||||| ||||||||||    
T  6977489 agctgtttccataagctcactcaaacaatctcacaaatgcttatgccaatagataaactctaataagtcaatccaaaca 6977567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 22759231 - 22759301
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    ||||||||||| |||||| || ||| |||  |||||| |||| ||||||| ||||||||| ||||||||||    
T  22759231 ataagctgtttccataagctctctcgaactgtctcgctagtgcttatgccagtagataagctcaaataagt 22759301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 25511688 - 25511778
Alignment:
Q  46 aacatgtcataagctgttttcat-aagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||||||||||  | ||  || | |||||| ||| ||||||   |||||| |||||||||||||||||||| ||||||||||    
T  25511688 aacatgtcataagctgttttggttaaactctcccaaacagtcttgcaagttcgtatgcctgtagataagttcaaataagtcaatccaaaca 25511778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 25670594 - 25670516
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    ||||||||||||| ||||||||||||||  |||||||| |||| |||| | ||||| |  |||||||| |||| |||||    
T  25670594 aacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagtaagt 25670516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 30751625 - 30751671
Alignment:
Q  90 caagtgtttatgccggtagataagttcaaataagttaatccaaacat 136  Q
    |||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  30751625 caagtgcttatgtcagtagataagtttaaataagttaatccaaacat 30751671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 40598454 - 40598404
Alignment:
Q  85 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||| ||||  ||||||||| |||||||||| ||||||||||    
T  40598454 tctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaaca 40598404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 43219674 - 43219624
Alignment:
Q  24 aataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||||||||||| |||| |  |||||||||||||||||||| ||||||||    
T  43219674 aataagctgaaaacagcttatgaacatgtcataagctgttttgataagttc 43219624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 13960723 - 13960675
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgc 102  Q
    |||||||||||||||||| || |||||| | ||||||||||| ||||||    
T  13960723 ataagctgttttcataagctctctcaaatagtctcgcaagtgcttatgc 13960675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 25596066 - 25596189
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| ||||||| |||||| | || |  ||| |||||||||||||||| ||| |||  | | |||| |||| ||| || |||||| |||||||||| ||    
T  25596066 ttatgaaaataagttgaaaacaacttagtaacttgtcataagctgtttttataggttttccctaacaatctcacaa-tgcttatgctggtagataagctc 25596164  T
Q  117 aaataagttaatccaaacatgccct 141  Q
    |||||||| | |||||||| |||||    
T  25596165 aaataagtcagtccaaacaggccct 25596189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 31744921 - 31744953
Alignment:
Q  103 cggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||| ||||||||||||||||||||||    
T  31744921 cggtagataaattcaaataagttaatccaaaca 31744953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 33266443 - 33266399
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    ||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  33266443 ttatgtcggtagataagctcaaataagtcaatccaaacataccct 33266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 34083557 - 34083517
Alignment:
Q  105 gtagataagttcaaataagttaatccaaacatgccctaggt 145  Q
    |||||| || |||||||||| ||||||||||||||||||||    
T  34083557 gtagatgagctcaaataagtcaatccaaacatgccctaggt 34083517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 43219833 - 43219785
Alignment:
Q  25 ataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||||| |||| |||| |  ||||||||||||||||||||||||||||    
T  43219833 ataagctaaaaacagcttatgaacatgtcataagctgttttcataagtt 43219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 46055958 - 46055914
Alignment:
Q  80 aacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    ||||||||| |||| ||||||| |||||||||| |||||||||||    
T  46055958 aacattctcacaagcgtttatgtcggtagataacttcaaataagt 46055914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 16162822 - 16162916
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccc 140  Q
    |||| |||||||||||||||||||||||  |||||||| |||| |||||||||||||  ||||||||  |||||||||  |||||||||| ||||    
T  16162822 aacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccc 16162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 7646239 - 7646364
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| |||| | ||||||||||||||| |||||||||| ||| | |||||||| || | |||| ||||| | |||| |||| |     
T  7646239 ttatggaaataagctgaaaatagctgatcaacatgtcataagcagttttcataaattctcccaaacattgtcactagtgcttatgtcagtagttaagctt 7646338  T
Q  117 aaataagttaatccaaacatgcccta 142  Q
    |||||||  ||| |||||| ||||||    
T  7646339 aaataaggcaatacaaacaggcccta 7646364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 9700034 - 9700158
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| ||||||| |||||| |||| |   |||||||||||  || ||||| ||| || |||||| | |||| |||||||||||||  ||||||||| ||    
T  9700034 ttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctc 9700133  T
Q  117 aaataagttaatccaaacatgccct 141  Q
    ||||||||||||||||||| |||||    
T  9700134 aaataagttaatccaaacaggccct 9700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 6950355 - 6950468
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| | || | | |||||||||| | ||||| |||||| || | |||||| |||| ||| |||||||||| ||||||||  ||    
T  6950355 ttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactc 6950454  T
Q  117 aaataagttaatcc 130  Q
    |||||||| |||||    
T  6950455 aaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 2488016 - 2487921
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    ||||||| ||||| ||||||||||||||| | |||||| |||| |||||| ||||| | |||||| |  |||||||||  ||||||||||||||||    
T  2488016 aacatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatgccct 2487921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 39881729 - 39881646
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatc 129  Q
    ||||||||||||||| |||||| ||| ||   |||||| |||| ||||||||||||||  ||||||||||||||||||| ||||    
T  39881729 aacatgtcataagctattttcacaagctcttccaaacaatctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 14926960 - 14926894
Alignment:
Q  76 ctcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    |||||||| |||| |||||| ||||||| ||| |||||||||||||||| |||||||||| ||||||    
T  14926960 ctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaacaagcccta 14926894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 34770931 - 34771022
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgc 138  Q
    ||||||||||||||||||||||| | || |||||||| | || |||||| ||||||  | ||||||  |||||||||| || ||||||||||    
T  34770931 acatgtcataagctgttttcataggatctctcaaacagtttcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaacatgc 34771022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 34849136 - 34849259
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcat-aagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagtt 115  Q
    |||||||||| |||||||||  ||| |  |||||||||| ||| ||||||||| ||||| | |||||| ||||  ||||  ||||||| |||| |||| |    
T  34849136 ttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagttctcccaaacagtctcaaaagtacttatgccagtagctaagct 34849235  T
Q  116 caaataagttaatccaaacatgcc 139  Q
    |||||||| |||||| ||||||||    
T  34849236 caaataagctaatccgaacatgcc 34849259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 2213460 - 2213546
Alignment:
Q  36 aaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    |||||| | |||||||||||||||||||||||||| | |   |||||| | || |||||||||||||  |||||||| |||||||||    
T  2213460 aaagcttatcaacatgtcataagctgttttcataactactaccaaacagtatcacaagtgtttatgctagtagataatttcaaataa 2213546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 10383918 - 10383976
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttca 75  Q
    |||||||||||||||| ||| |||| |  || |||||||||||||||||||||||||||    
T  10383918 ttatggaaataagctgtaaacagcttatgaaaatgtcataagctgttttcataagttca 10383976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 10075541 - 10075472
Alignment:
Q  66 cataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||| || || ||||| |||||||||| |||||||| ||||||||  ||||||||||||||| |||||    
T  10075541 cataagctctcttaaacagtctcgcaagtatttatgccagtagataaactcaaataagttaatcgaaaca 10075472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 12851209 - 12851329
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattc--tcgcaagtgtttatgccggtagataagt 114  Q
    ||||| |||||||| ||||| | || |  ||||||| ||||||||||||||||||||  | |||||| ||  || ||||||||||||||  ||| |||||    
T  12851209 ttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttcccaaacagtctatcacaagtgtttatgccaataggtaagt 12851308  T
Q  115 tcaaataagttaatccaaaca 135  Q
    ||| |||||  ||||||||||    
T  12851309 tcagataagccaatccaaaca 12851329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 37461204 - 37461292
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||| | ||| |||||  || |||| ||| ||| || |||||||| | | |||||||||||||||||||||||||||||||    
T  37461204 aacatgtcataagttatttccataaactctctcatacagtcttgctagtgttta-gtcagtagataagttcaaataagttaatccaaaca 37461292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 39389175 - 39389106
Alignment:
Q  55 taagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    |||||||||||| ||||||| ||||  || |||| |||| ||||||| | ||||||||||||||||||||    
T  39389175 taagctgttttcctaagttctctcattcaatctcacaagcgtttatggcagtagataagttcaaataagt 39389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 42215343 - 42215219
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaa------cattctcgcaagtgtttatgccggtagat 110  Q
    ||||| |||||||||||||| |||| |  |||| |||||||||||||||||| ||||| | ||||      || | ||| ||||| ||||||| ||| ||    
T  42215343 ttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattagttctcccaaacagtgtcactgtcgtaagtgcttatgccagtaaat 42215244  T
Q  111 aagttcaaataagttaatccaaaca 135  Q
    ||| ||||||||||||||| |||||    
T  42215243 aagctcaaataagttaatctaaaca 42215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 45098978 - 45098905
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    |||||||||| |||||||||| |||| |  ||||| |||| |||||||||||||| ||||||||| || |||||    
T  45098978 atgtcataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataagctcgaataa 45098905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 2493045 - 2493085
Alignment:
Q  93 gtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  2493045 gtgtttatgccggtagatatgttcaaataagtcaatccaaa 2493085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 3254263 - 3254315
Alignment:
Q  22 gaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||| |||||||    
T  3254263 gaaataagctgaaaacagcttatgaacatgtcataagctgttttcttaagttc 3254315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 7918781 - 7918713
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    ||||| |||||||||||| || | |||||| |||| |||||||||||||  ||||||||||| ||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgctagtagataagtttaaataa 7918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 31168115 - 31168159
Alignment:
Q  98 tatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||    
T  31168115 tatgcctgtagataggttcaaataagtcaatccaaacatgcccta 31168159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 43368731 - 43368619
Alignment:
Q  23 aaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    ||||||| |||||| ||||||  ||||||||||||| |||||||||||| |    ||| || |||| ||| || |||||   ||||||||| ||||||||    
T  43368731 aaataagttgaaaatagctaatgaacatgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttagtagataagatcaaataa 43368632  T
Q  123 gttaatccaaaca 135  Q
    || ||||||||||    
T  43368631 gtcaatccaaaca 43368619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 10437984 - 10438039
Alignment:
Q  85 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccc 140  Q
    |||| |||||| |||||||  | ||||||||||||||||| |||||||||||||||    
T  10437984 tctcacaagtgattatgccattggataagttcaaataagtcaatccaaacatgccc 10438039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 7714336 - 7714398
Alignment:
Q  78 caaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccc 140  Q
    |||||| |||| |||||||||||| |  || ||||| |||||||||| |||||||||||||||    
T  7714336 caaacagtctcacaagtgtttatgacattatataagctcaaataagtcaatccaaacatgccc 7714398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 9835937 - 9835883
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataag 71  Q
    ||||||||||||| |||||| |||| |  ||||||||||||||||||| ||||||    
T  9835937 ttatggaaataagatgaaaacagcttatgaacatgtcataagctgtttacataag 9835883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 10120822 - 10120856
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaaca 83  Q
    |||||||||||||||||||||||||| ||||||||    
T  10120822 atgtcataagctgttttcataagttctctcaaaca 10120856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 11569464 - 11569398
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataag 113  Q
    |||||||||||||||||| |||||| || || ||||| |||| |||||| ||||||| | |||||||    
T  11569464 acatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatgccagcagataag 11569398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 27465446 - 27465496
Alignment:
Q  79 aaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatc 129  Q
    ||||| ||||||||||| |||||||  ||||||||||||||||||| ||||    
T  27465446 aaacagtctcgcaagtgcttatgccaatagataagttcaaataagtcaatc 27465496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 42893447 - 42893409
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  42893447 ttatgccggtagataaactcaaataagttaatccaaaca 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 43504784 - 43504890
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| |||| |  |||| ||| |||| ||||||||| ||||| |  ||||| || | |||||| ||| ||| ||||||||| |     
T  43504784 ttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatcagttctccgaaacagtcacacaagtgcttaagccagtagataagctt 43504883  T
Q  117 aaataag 123  Q
    |||||||    
T  43504884 aaataag 43504890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 44236860 - 44236742
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| | || |  | |||||| | |||| ||||||||  ||| | | |||| |||| |||||| ||||||| ||||||||  ||    
T  44236860 ttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcacaagtgcttatgccagtagataaactc 44236761  T
Q  117 aaataagttaatccaaaca 135  Q
    ||||||| |||||||||||    
T  44236760 aaataaggtaatccaaaca 44236742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 1117408 - 1117465
Alignment:
Q  85 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    |||| |||||||||||||  ||| |||||||||| ||||| |||||||||| ||||||    
T  1117408 tctcacaagtgtttatgctagtatataagttcaagtaagtcaatccaaacaagcccta 1117465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 1561369 - 1561426
Alignment:
Q  76 ctcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    |||||||| |||| ||||||||||||||  |||||||| |||||||| | ||||||||    
T  1561369 ctcaaacaatctcacaagtgtttatgccattagataagatcaaataaatcaatccaaa 1561426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 1892200 - 1892143
Alignment:
Q  78 caaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||| |||| |||||||||||| ||||||||||  |||||||||| |||| |||||    
T  1892200 caaacaatctcacaagtgtttatgacggtagataaactcaaataagtcaatctaaaca 1892143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 2458603 - 2458546
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    |||||||||||| ||||||| |||| |  |||||| |||||||||| |||||||||||    
T  2458603 ttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagttc 2458546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 44014806 - 44014712
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccc 140  Q
    |||| |||||||||||||||||||||||  |||||||| |||| |||||||||||||  ||||||||  |||||||||  |||||||||| ||||    
T  44014806 aacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccc 44014712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 41164998 - 41164909
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||| ||||||| |||||||    |||||||| || |||||  ||||||||||||||||||||||||||| |||||||||||    
T  41164998 aacatgtcataaactgttttaataagtttttccaaacattgtcacaagttcttatgccggtagataagttcaaataagctaatccaaaca 41164909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 45541611 - 45541722
Alignment:
Q  24 aataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||| ||||||| |||| |  |||||||||||||||||||||||||||||    ||||| |||  ||||||||||| ||  || ||||| |||||||||    
T  45541611 aataacctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataag 45541710  T
Q  124 ttaatccaaaca 135  Q
    | ||||||||||    
T  45541711 tcaatccaaaca 45541722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 3776393 - 3776332
Alignment:
Q  51 gtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataa 112  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |  ||||||| ||||||||    
T  3776393 gtcataagctgttttcataagttctctcaaacattctcacaattacttatgccagtagataa 3776332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 21574523 - 21574643
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctc--gcaagtgtttatgccggtagataagt 114  Q
    ||||||||||||||| |||  |||| |  ||||||||||||| |||||||||||| || | |||||| ||||   ||| || || |||| ||||||||||    
T  21574523 ttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtctcaaacaattgattttgccagtagataagt 21574622  T
Q  115 tcaaataagttaatccaaaca 135  Q
    |||||||||| | ||||||||    
T  21574623 tcaaataagtcattccaaaca 21574643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 21872302 - 21872213
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacat 136  Q
    |||||||||||||| |||||| ||| |    |||||| |||| |||||| ||||| | ||||||||| ||||||||||||||||||||||    
T  21872302 acatgtcataagctattttcaaaagcttttccaaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaacat 21872213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 49465702 - 49465645
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||||||||||||| |||||| ||||  ||||||| |||||||||||||||||||||    
T  49465702 ttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttttcataagttc 49465645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 50211805 - 50211886
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||| ||||||||||||||| |||||||| |||  |||||| |||||   ||||||||| | |||||||||||||||||||    
T  50211805 ataagttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 50211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 20210965 - 20210837
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||| ||||||||||||||| | || |   |||| |||||| | |||| |||||| || |||||||| |||| |||||| ||||| | ||||||||  ||    
T  20210965 ttatagaaataagctgaaaacaactcatagacatatcataatccgtttgcataagatctctcaaacagtctcacaagtggttatgtcagtagataacctc 20210866  T
Q  117 aaataagttaatccaaacatgccctaggt 145  Q
    |||||| | ||||||||||| ||||||||    
T  20210865 aaataaatcaatccaaacataccctaggt 20210837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 2100187 - 2100088
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccctaggt 145  Q
    ||||||||||||||||| | |||||| || | |||||| |||| |||||||||  || |  ||||||| |||||||||| ||||||||||  ||||||||    
T  2100187 aacatgtcataagctgtctccataagctctcacaaacagtctcacaagtgttttagctgaaagataagctcaaataagtcaatccaaacagaccctaggt 2100088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 19679334 - 19679260
Alignment:
Q  48 catgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    ||||||||||| ||||||| ||||||| |||||| ||| ||||||||| ||||||  ||||||||  ||||||||    
T  19679334 catgtcataagttgttttcgtaagttctctcaaagattttcgcaagtgcttatgctagtagataaactcaaataa 19679260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 50015948 - 50016014
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataa 112  Q
    ||||||||||| | | ||||||||||||| |||||||| |||| ||||||||||||||  |||||||    
T  50015948 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 50016014  T

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Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 2304279 - 2304202
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||||||||||| || |||||||| ||| |||||| | | || |||||||||||||  |||||| ||||||||||||    
T  2304279 aacatgtcataagttgctttcataatttctctcaaatagtttcacaagtgtttatgctagtagatcagttcaaataag 2304202  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 2413686 - 2413598
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||| ||| ||||||||||| || ||||||||  ||  |||||| ||||||   ||||| ||||||||||||| ||||||||||    
T  2413686 acatgtcatgagccgttttcataagctctctcaaacagacttacaagtgattatgctaatagatgagttcaaataagtaaatccaaaca 2413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5391912 - 5391968
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||| ||||||| |||||| |||| |  ||||||||||||||||||||||||||||    
T  5391912 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 20195038 - 20194954
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||||| ||||||||||||| || | |||||| |||| ||| || ||||||  | |||||||||||||||| | ||||||||    
T  20195038 atgtcataaactgttttcataagctctcacaaacagtctcacaactgcttatgcaagaagataagttcaaataaatcaatccaaa 20194954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 45783385 - 45783329
Alignment:
Q  68 taagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    ||||||| |||||||| |||| |||| |||| |||||||| ||||||||||||||||    
T  45783385 taagttctctcaaacagtctcacaagcgtttgtgccggtatataagttcaaataagt 45783329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 30573943 - 30573829
Alignment:
Q  25 ataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    |||||||||||| |||| |  |||||| |||||  ||||||||||||||| | ||||||  ||| |||||| ||||| | |||||| || ||||||||||    
T  30573943 ataagctgaaaacagcttatgaacatgccataatttgttttcataagttctcacaaacaaactcacaagtgcttatgtcagtagat-agctcaaataagt 30573845  T
Q  125 taatccaaacatgccc 140  Q
      ||||||||| ||||    
T  30573844 ccatccaaacaggccc 30573829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 50952366 - 50952485
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaag-tgtttatgccggtagataagtt 115  Q
    ||||||||||||||| |||| || | |  ||||||||||||||||||||| || |||| ||| |||| |||| || | ||||| ||| | | |||||| |    
T  50952366 ttatggaaataagcttaaaacagtttatgaacatgtcataagctgttttcgtacgttctctcgaacagtctcacaggttgtttgtgcggatggataagct 50952465  T
Q  116 caaataagttaatccaaaca 135  Q
    |||||||||  |||||||||    
T  50952466 caaataagtccatccaaaca 50952485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 53952080 - 53952147
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaaca 83  Q
    |||||| |||||||||||||| |||| |  ||||||| || |||||||||||||||||| || |||||    
T  53952080 tttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttctcttaaaca 53952147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 14548758 - 14548680
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtg 95  Q
    |||||||||||||||||||| |||  |  || |||||||| | |||||||||||| || |||||||| |||| ||||||    
T  14548758 ttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctctctcaaacagtctcacaagtg 14548680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 24684779 - 24684741
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  24684779 ttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 25925810 - 25925872
Alignment:
Q  65 tcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaa 127  Q
    |||||||||| || ||||| | |  |||||| ||||||| |||||||||||||||||||||||    
T  25925810 tcataagttctctaaaacagtgttacaagtgcttatgccagtagataagttcaaataagttaa 25925872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 39723270 - 39723220
Alignment:
Q  24 aataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||||||||||| |||| |  |||||||||||||||||||| ||||||||    
T  39723270 aataagctgaaaacagcttatgaacatgtcataagctgttttgataagttc 39723220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 40240785 - 40240740
Alignment:
Q  90 caagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||||  ||| ||||| |||||||||||||||||||||    
T  40240785 caagtgtttatgctagtatataagctcaaataagttaatccaaaca 40240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 41644478 - 41644369
Alignment:
Q  21 ggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaat 120  Q
    |||||||||||||||| |||| |  || |||||  ||| |||||| |||||||| |  ||||| | || |||||| ||||||  ||||||||| |||||     
T  41644478 ggaaataagctgaaaacagcttatgaaaatgtcccaagttgtttttataagttctcctaaacagtgtctcaagtgcttatgctagtagataagctcaaag 41644379  T
Q  121 aagttaatcc 130  Q
    ||||||||||    
T  41644378 aagttaatcc 41644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 27290936 - 27290884
Alignment:
Q  19 atggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataag 71  Q
    |||||||||||||||||| |||| |    ||||||||||||||||||||||||    
T  27290936 atggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataag 27290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 38318992 - 38319044
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcat 68  Q
    ||||||||||||||||||||| |||| |  ||||||| ||||| |||||||||    
T  38318992 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 38319044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 39723429 - 39723381
Alignment:
Q  25 ataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||||| |||| |||| |  ||||||||||||||||||||||||||||    
T  39723429 ataagctaaaaacagcttatgaacatgtcataagctgttttcataagtt 39723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 39769645 - 39769681
Alignment:
Q  92 agtgtttatgccggtagataagttcaaataagttaat 128  Q
    |||||||||||  ||||||||||||||||||||||||    
T  39769645 agtgtttatgcgagtagataagttcaaataagttaat 39769681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 37611252 - 37611147
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||| ||||||| |||| |  ||||||||| ||| |||||||||||| || |||||||| |||| |||||  || |||| ||||||||||||    
T  37611252 ttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagtacttgtgccagtagataagttc 37611153  T
Q  117 aaataa 122  Q
    ||||||    
T  37611152 aaataa 37611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 37787982 - 37787877
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||| ||||||| |||| |  ||||||||| ||| |||||||||||| || |||||||| |||| |||||  || |||| ||||||||||||    
T  37787982 ttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagtacttgtgccagtagataagttc 37787883  T
Q  117 aaataa 122  Q
    ||||||    
T  37787882 aaataa 37787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 499769 - 499650
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagtt 115  Q
    ||||||||||||||||||||| | ||    ||||||||||||||||||||||||||||| | ||||||  ||  || ||| ||||| | |||| |||| |    
T  499769 tttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcctaacaggtgcttatgtcagtaggtaagct 499670  T
Q  116 caaataagttaatccaaaca 135  Q
    ||||||||| ||||||||||    
T  499669 caaataagtcaatccaaaca 499650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 11297233 - 11297115
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| ||||||   ||||||| |||| ||||| |||||| ||  ||||||| |||  ||||||||||||||  |||||||| |     
T  11297233 ttatgaaaataagctgaaaatagctaattgacatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||| ||| ||||||    
T  11297133 aaataagtcaattcaaaca 11297115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 38728435 - 38728549
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| |||| |  | ||||||||||||| |||||||||| || | |||||| || | || |||||||| ||  |||||||| ||    
T  38728435 ttatggaaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaacaatcacacaggtgtttataccaatagataagctc 38728534  T
Q  117 aaataagttaatcca 131  Q
    ||||| || ||||||    
T  38728535 aaatatgtcaatcca 38728549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 8089969 - 8090082
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| |||| |  || || ||||||| |||||||||||| || |||||| | |||||| |||| || ||   ||||||||||||    
T  8089969 ttatgaaaataagctgaaaacagcttaggaatatatcataagttgttttcataagctctctcaaatagtctcgcgagtgcttgtgttagtagataagttc 8090068  T
Q  117 aaataagttaatcc 130  Q
    |||||||| |||||    
T  8090069 aaataagtcaatcc 8090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 17368709 - 17368823
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||||||||||  ||  |  ||||||||||||| ||||||||||||||| ||    |  | || |||||| ||||||| |||||||||||     
T  17368709 ttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctct----cggtgtcacaagtgcttatgccagtagataagttt 17368804  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||| ||||||||||    
T  17368805 aaataagtcaatccaaaca 17368823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 3977341 - 3977397
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||| |||||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  3977341 ttatgaaaataagctgaagacagctaaggaacatgtcataagctgttttcataagtt 3977397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 11714872 - 11714776
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    |||||||| ||| ||||||| |||||||| | |||||  |||| |||||||||||||| |||| ||||  ||||||||  ||||||||||| |||||    
T  11714872 aacatgtcctaatctgtttttataagttctcccaaactatctcacaagtgtttatgcctgtagttaagcacaaataagcaaatccaaacatccccta 11714776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 11095502 - 11095427
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    |||||||||||||||||| || |||||| |||||||| | || |||||||||||| | ||||||||| | ||||||    
T  11095502 acatgtcataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataa 11095427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 18857406 - 18857316
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatg 137  Q
    |||||||||| |||||||||||||| |||    || ||||||| |||||  |||| || |||||||||| ||||||||||||||||||||||    
T  18857406 aacatgtcattagctgttttcataaattcttctaagcattctcacaagtcgttatcccagtagataagt-caaataagttaatccaaacatg 18857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 10125755 - 10125649
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| | || | |||||||||||||| ||||| ||||||||| |||| ||| | || |||||| | ||| | ||||||||| |     
T  10125755 ttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctctcagacaatgtcacaagtgctcatgtcagtagataagctt 10125656  T
Q  117 aaataag 123  Q
    |||||||    
T  10125655 aaataag 10125649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 25720454 - 25720336
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||||| ||| ||| | |  |||||||||| |  |||||| ||||| || |||| ||| |||| |||||| ||||||| ||||||||  ||    
T  25720454 ttatggaaataagctaaaagaagtttatgaacatgtcatgaattgtttttataagctctctcagacagtctcacaagtgcttatgccagtagataacctc 25720355  T
Q  117 aaataagttaatccaaaca 135  Q
    ||||||| |||| ||||||    
T  25720354 aaataagctaattcaaaca 25720336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 13508541 - 13508590
Alignment:
Q  85 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaac 134  Q
    |||| |||||||||||||| |||||||||||||||||||| || ||||||    
T  13508541 tctcacaagtgtttatgccagtagataagttcaaataagtcaagccaaac 13508590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 21782645 - 21782576
Alignment:
Q  65 tcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaac 134  Q
    ||||||| || ||||||||  ||| |||||||||||||| |||||||| ||||||||||| || ||||||    
T  21782645 tcataagctctctcaaacagcctcacaagtgtttatgccagtagataatttcaaataagtcaagccaaac 21782576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 41112935 - 41112830
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||| ||||| || | || ||||||||| ||||| |||||||||||||   || ||| | || |||||||||||||  ||||||||| ||    
T  41112935 ttatgaaaataagccgaaaacagattacgaacatgtcagaagctattttcataagttctgccagacaatgtcacaagtgtttatgcaagtagataagctc 41112836  T
Q  117 aaataa 122  Q
    ||||||    
T  41112835 aaataa 41112830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 14599372 - 14599284
Alignment:
Q  54 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    ||||| |||||  ||||| || |||||||| |||  |||||||||||||  ||| |||||||||||||| | |||||||||| ||||||    
T  14599372 ataagttgtttcgataagctctctcaaacaatcttacaagtgtttatgctagtaaataagttcaaataactgaatccaaacaggcccta 14599284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 12407722 - 12407659
Alignment:
Q  62 ttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagtt 125  Q
    |||||||||| || |||||||  |||| |||||||||||| |  ||||||||||||||||||||    
T  12407722 ttttcataagctctctcaaaccgtctcacaagtgtttatgtcaatagataagttcaaataagtt 12407659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 26516470 - 26516557
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaac 134  Q
    |||| |||||||||||||||||||| || || |||||||| | || ||| ||||||| ||| ||||  ||||||||| |||| |||||    
T  26516470 acatatcataagctgttttcataagctctcttaaacattcccacaggtgcttatgccagtaaataaactcaaataagctaattcaaac 26516557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 36318806 - 36318937
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagtt 115  Q
    |||||| |||||||||||||| |||| | ||| |||| ||||| |||||   | ||||  ||| |||| |||| | |||| ||||||| ||||||||| |    
T  36318806 tttatgtaaataagctgaaaacagcttaacaagatgtaataagttgtttatttcagttttctctaacaatctcaccagtgcttatgccagtagataagct 36318905  T
Q  116 caaataagttaatccaaacatgccctaggtat 147  Q
     |||||||  ||||||||||||| ||| ||||    
T  36318906 aaaataagacaatccaaacatgctctaagtat 36318937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 37526236 - 37526165
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctc 88  Q
    |||||||||||||||||||| |||| |  ||||||||||| | ||| |||||||| || |||||||| ||||    
T  37526236 ttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctc 37526165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 37690673 - 37690602
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctc 88  Q
    |||||||||||||||||||| |||| |  ||||||||||| | ||| |||||||| || |||||||| ||||    
T  37690673 ttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctc 37690602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 2568723 - 2568797
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||||||||||||||||||||||||    ||||| |||| |||||| |||  || ||||||||| |||||||||    
T  2568723 atgtcataagctgttttcataagttcttctaaacagtctctcaagtgcttacaccagtagataagctcaaataag 2568797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 11104974 - 11105056
Alignment:
Q  53 cataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||| |||||||||||||||| | |||| | | || |||||| |||||| ||| |||||| |||||||| | ||||||||||    
T  11104974 cataaactgttttcataagttctcccaaatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatccaaaca 11105056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 17258920 - 17258814
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| |||||||||||||| |||| |  ||||||||||||||| |||||||| |||| | |||| | | || |||||| |||||   || |||||| ||    
T  17258920 ttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaatgtcacaagtgcttatgttagttgataagctc 17258821  T
Q  117 aaataag 123  Q
    |||||||    
T  17258820 aaataag 17258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 12460009 - 12459920
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||| |||||||||| |||| | |||||| |||| || ||| ||||| | | |||||||   |||||||| ||||||||||    
T  12460009 aacatgtcataagttgttttcataggttctcccaaacagtctcacaggtgcttatgtcagcagataagccgaaataagtcaatccaaaca 12459920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 17369309 - 17369354
Alignment:
Q  90 caagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||| ||||| | |||||||||||||||||||| ||||||||||    
T  17369309 caagtgattatgtcagtagataagttcaaataagtcaatccaaaca 17369354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 36638780 - 36638833
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataa 70  Q
    ||||||||||||||||||||||||| |  |||||||||||  | ||||||||||    
T  36638780 ttatggaaataagctgaaaaaagcttatgaacatgtcatacacagttttcataa 36638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 37954720 - 37954837
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgt-cataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||| ||||||| |||||||||||||  || || | ||||||||||||||||||  || | | |||| ||||  || | |||||||| ||||||||| ||    
T  37954720 tatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataaactctcccgaacagtctctaaattttttatgcctgtagataagctc 37954819  T
Q  117 aaataagttaatccaaac 134  Q
    |||||||  |||||||||    
T  37954820 aaataagccaatccaaac 37954837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 4273380 - 4273328
Alignment:
Q  51 gtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgcc 103  Q
    |||||||||||||| |||| |||| |||||||| |||| ||| ||||||||||    
T  4273380 gtcataagctgtttccataggttctctcaaacaatctcacaaatgtttatgcc 4273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 39594920 - 39594964
Alignment:
Q  97 ttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    ||||| ||||||||||| |||||||||| |||||||||| |||||    
T  39594920 ttatgtcggtagataagctcaaataagtcaatccaaacaagccct 39594964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 7368062 - 7367973
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||||||||||||| || || | |||||| |||| |||| ||||||||| ||||||||  |||||||||| ||||||||||    
T  7368062 aacatgtcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaaca 7367973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 47399553 - 47399636
Alignment:
Q  52 tcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||| |||||||| |||||| ||||| || |||| ||||| |||||||| ||| |||||||||||||||||||| ||||||    
T  47399553 tcataagttgttttcacaagttctctcaatcagtctcacaagtttttatgccagtatataagttcaaataagttaattcaaaca 47399636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 46247266 - 46247339
Alignment:
Q  45 caacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaa 118  Q
    |||||||||||||| | |||||||||| || |||| ||| |||| ||||||||||||| |||||||||||||||    
T  46247266 caacatgtcataagttcttttcataagatctctcagacaatctcacaagtgtttatgctggtagataagttcaa 46247339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 45128347 - 45128235
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| |||| |   |||||  || || ||||| |||||| || |||||||| | || || ||| ||||||||||||||||||||    
T  45128347 ttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctctctcaaacaatatcacatgtggttatgccggtagataagttc 45128248  T
Q  117 aaataagttaatc 129  Q
    |||||||| ||||    
T  45128247 aaataagtcaatc 45128235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 46090850 - 46090738
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatg-ccggtagataagttc 116  Q
    |||| ||||| |||||||| | ||||| |||||||| ||||||||||||||||| |  |||| ||| |||| ||| |||| ||| | |||||||||||||    
T  46090850 tatgaaaataggctgaaaacaactaacgaacatgtcttaagctgttttcataagctatctcatacagtctcacaaatgttaatgtcaggtagataagttc 46090751  T
Q  117 aaataagttaatc 129  Q
    |||||||| ||||    
T  46090750 aaataagtcaatc 46090738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 2996607 - 2996718
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttca 117  Q
    |||| ||||||| ||||||||||| |   |||||||||||| |||||||||||| || |||||||| ||||  ||||| ||||| |  || |||||||||    
T  2996607 tatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagttca 2996706  T
Q  118 aataagttaatc 129  Q
    |||||| |||||    
T  2996707 aataagctaatc 2996718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 48719429 - 48719350
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtg 95  Q
    |||||| |||||||||||||| |||| || |||||||||||| |  ||||||||||||| |||||||| |||| ||||||    
T  48719429 tttatgaaaataagctgaaaacagcttacgaacatgtcataaaccattttcataagttccctcaaacaatctcacaagtg 48719350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 27123389 - 27123271
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||| |||||| | || |   |||||||||||| ||||| |||||| || |||||||| |||| |||||  ||||||  ||  ||||| ||    
T  27123389 ttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctc 27123290  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||||||||||||||    
T  27123289 aaataagttaatccaaaca 27123271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 28615400 - 28615485
Alignment:
Q  49 atgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||| |||||||||||||||||| | |||||| |||| |||||||||||||  ||||||||  | |||||||| ||||||||||    
T  28615400 atgtcattagctgttttcataagttctc-caaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaaca 28615485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 30207608 - 30207503
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||||||||||| |||| ||  |||||||||| |||||| | ||||| || ||| | || |||| |||||| ||||||| ||||||||  ||    
T  30207608 ttatggaaataagctgaaaacagcttacagacatgtcatatgctgttcttataagctctctcgatcagtctcacaagtggttatgcctgtagataaaatc 30207509  T
Q  117 aaataa 122  Q
    ||||||    
T  30207508 aaataa 30207503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 46013322 - 46013249
Alignment:
Q  45 caacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaa 118  Q
    ||||||| |||||| | |||||||||| || |||| ||| |||| ||||||||||||| |||||||||||||||    
T  46013322 caacatgccataagttcttttcataagatctctcagacaatctcacaagtgtttatgctggtagataagttcaa 46013249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 28300336 - 28300213
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||| ||||||| |||||| | || |  ||||||||||| ||||||||||||| ||| ||||| || || | ||| |    ||||  ||||||||||||    
T  28300336 ttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctctcaatcagtcacacaaattccaatgcaagtagataagttc 28300237  T
Q  117 aaataagttaatccaaacatgccc 140  Q
    ||| ||||||||||||||||||||    
T  28300236 aaaaaagttaatccaaacatgccc 28300213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 4071921 - 4071994
Alignment:
Q  27 aagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttat 100  Q
    |||||||||| | || |||||||  |||||||||||||||||||| || |||||||| |||| |||||| ||||    
T  4071921 aagctgaaaacaacttaccaacaaatcataagctgttttcataagctctctcaaacagtctcacaagtgcttat 4071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 18628555 - 18628486
Alignment:
Q  52 tcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaata 121  Q
    ||||||| |||||||||||| || | |||||| |||| |||||||||||| | ||||||||| |||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 1137745 - 1137861
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||||||||||| ||||||| | || |  ||||||||||||| ||||||||||||||| |  ||||| | || ||||||||||   |  |||||||  ||    
T  1137745 ttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcacaagtgtttaaaacactagataaaatc 1137844  T
Q  117 aaataagttaatccaaa 133  Q
    ||||||| |||||||||    
T  1137845 aaataagctaatccaaa 1137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 29126252 - 29126176
Alignment:
Q  65 tcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 141  Q
    |||||||||| | |||| | | ||| ||||| ||||||||||||||||| |||||||||  |||||||||| |||||    
T  29126252 tcataagttcccccaaatagtttcgtaagtgcttatgccggtagataagctcaaataagccaatccaaacaagccct 29126176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 43886167 - 43886112
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||||||||||||||||| |||| |  || ||| |||||||||||||||||||||    
T  43886167 tatggaaataagctgaaaatagcttatgaaaatgccataagctgttttcataagtt 43886112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 44249317 - 44249368
Alignment:
Q  16 tttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttca 67  Q
    |||||| |||||||||||| ||| || | |||||||||||||||||||||||    
T  44249317 tttatgaaaataagctgaagaaaacttatcaacatgtcataagctgttttca 44249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 52172787 - 52172886
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccctaggt 145  Q
    ||||||||||||||||||||||||||||  | | |||| |||| ||| |  ||||||| |||  |||| |||||||||  ||||| || |||||||||||    
T  52172787 aacatgtcataagctgttttcataagttttccccaacagtctcacaaatacttatgccagtatgtaagctcaaataagccaatcctaaaatgccctaggt 52172886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 18512484 - 18512434
Alignment:
Q  85 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||| |||||||||||| | ||||||||| ||||||||||||||| |||||    
T  18512484 tctcacaagtgtttatgtcagtagataagctcaaataagttaatcgaaaca 18512434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 24160536 - 24160450
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    |||||| |||| |||||||||||||||||| |||| | |||| |||||  ||||  | || |||||| |||||||||| ||||||||    
T  24160536 acatgtgataaactgttttcataagttcacccaaataatctcacaagtacttatatctgttgataagctcaaataagtaaatccaaa 24160450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 31708858 - 31708768
Alignment:
Q  45 caacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||| | | |||||||||||||  ||||||| |||| | ||| | |||  |||| ||||||||||||| ||| ||||||||||    
T  31708858 caacatgtcataggatattttcataagttctatcaaacaatctcacgagtatatatatcggtggataagttcaaattagtcaatccaaaca 31708768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 46187872 - 46187826
Alignment:
Q  91 aagtgtttatgccggtagataagttcaaataagttaatccaaacatg 137  Q
    ||||||||||||| ||||||||| ||||||||| | |||||||||||    
T  46187872 aagtgtttatgccagtagataagctcaaataagatcatccaaacatg 46187826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 50800064 - 50799986
Alignment:
Q  20 tggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgttt 98  Q
    ||||||||||||||||| |||| |   |||||||||||| ||||| ||| ||||| | |||||| |||| |||||||||    
T  50800064 tggaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctcccaaacaatctcacaagtgttt 50799986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 55870345 - 55870259
Alignment:
Q  51 gtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatg 137  Q
    ||||||| || |||||||||| |  |||||| | |||| ||| |||||||| |  |||||||  |||||||||||||||||||||||    
T  55870345 gtcataaacttttttcataagctatctcaaagagtctcacaaatgtttatgtcattagataaactcaaataagttaatccaaacatg 55870259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 24193638 - 24193683
Alignment:
Q  90 caagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||||| | ||||||| |||||||||| ||||||||||    
T  24193638 caagtgtttatgccaggagataagctcaaataagtcaatccaaaca 24193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 24370958 - 24370881
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagt 124  Q
    |||||||||||| ||||| ||||||||   |||||||||||| || ||| ||||||   |||||||| ||||||||||    
T  24370958 acatgtcataagttgtttccataagttttatcaaacattctcacatgtgcttatgcgaatagataagctcaaataagt 24370881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 39178270 - 39178185
Alignment:
Q  50 tgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||| |||||||||||||| | |||||| | ||  ||||||||||| | ||||||| | | ||||| || ||||||||||    
T  39178270 tgtcataagcggttttcataagttctcccaaacagtgtcaaaagtgtttatgtcagtagatatgcttaaatacgtcaatccaaaca 39178185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 42641647 - 42641570
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataag 123  Q
    ||||||||||||| |||||||||||||||    ||||| | || |||||||| | ||| ||||||||| |||||||||    
T  42641647 aacatgtcataaggtgttttcataagttcttgaaaacagtatcacaagtgttcacgccagtagataagctcaaataag 42641570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 1555016 - 1554968
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagt 94  Q
    ||||||||||||||| ||||||||| ||| |||||||| ||| ||||||    
T  1555016 aacatgtcataagctattttcataaattctctcaaacagtcttgcaagt 1554968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 6428081 - 6428169
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||| |||||||||||  || |||||||  |||| |||||| |||| ||  || ||||| |||||||||| ||| ||||||    
T  6428081 acatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatatataagctcaaataagtcaattcaaaca 6428169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 10172124 - 10172216
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgc 138  Q
    ||||||||| ||||||||| |||||| |   ||||||| | || |||||| ||||||   |||||||| |||||||| | |||||||||||||    
T  10172124 aacatgtcacaagctgtttccataagctatatcaaacagtttcacaagtgcttatgcatatagataagctcaaataaatcaatccaaacatgc 10172216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 20936266 - 20936210
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||||||||||| |||||| |||| |  ||||| ||||||| ||||||||||||||    
T  20936266 ttatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcataagtt 20936210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 22523748 - 22523808
Alignment:
Q  52 tcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataa 112  Q
    ||||||||| |||||||||||| ||||||||| |||| |||||  ||||| | ||||||||    
T  22523748 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtagataa 22523808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 22662283 - 22662227
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||||||||||||||||| |||| |  ||||| ||||||| | |||||||||||||    
T  22662283 tatggaaataagctgaaaatagcttatgaacatatcataagtttttttcataagttc 22662227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 32171420 - 32171336
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatg 101  Q
    |||||||||||||||||||| ||||     || |||||||||||||||||||||| || |||||||| ||||||||||| |||||    
T  32171420 ttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcgcaagtgcttatg 32171336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 32578022 - 32577931
Alignment:
Q  18 tatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtaga 109  Q
    ||||||||||||||||||| |||| |   |||||||||||| |||||||||||| || |||||||| | || ||||| |||||||| |||||    
T  32578022 tatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaacaatgtcccaagtatttatgccagtaga 32577931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 2455874 - 2455964
Alignment:
Q  48 catgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgc 138  Q
    ||||||||||| ||||| |||||| ||    ||||| ||||||||||| ||||||||||||||||| |||||||||| ||| ||| |||||    
T  2455874 catgtcataagttgtttccataagctcttctaaacaatctcgcaagtgcttatgccggtagataagctcaaataagtcaattcaatcatgc 2455964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 2460188 - 2460070
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||| |||||| | || |   |||||||||||| ||||| |||||| || |||||||| |||| |||||  ||||||  ||  ||||| ||    
T  2460188 ttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctc 2460089  T
Q  117 aaataagttaatccaaaca 135  Q
    |||||||||||||||||||    
T  2460088 aaataagttaatccaaaca 2460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 26559247 - 26559160
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||| ||||||| |||||||||||||||   |||||| |||| ||| || ||||||| |||| |||  |||||||||||||||||||    
T  26559247 aacatatcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 769200 - 769254
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttat 100  Q
    ||||||||||||| ||||||||||||||||  |||||| |||| |||||||||||    
T  769200 aacatgtcataagatgttttcataagttcatccaaacagtctcacaagtgtttat 769254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 2263254 - 2263344
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacat 136  Q
    ||||||||||| | ||||||||||||||| |||||||| | ||  ||||||||||| |  |||| ||||| |||||||  |||||||||||    
T  2263254 aacatgtcatatgttgttttcataagttctctcaaacagtttcttaagtgtttatgacaatagagaagtttaaataagacaatccaaacat 2263344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 31624123 - 31624180
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||| ||||||| |||||| |||| |  |||||||||||||||||||||||||||||    
T  31624123 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc 31624180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 34403888 - 34404009
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||| |||||| | || |  ||||||||||||| ||||||| ||| ||| |  ||||| |||  |||||||||||||  ||  || || |     
T  34403888 ttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtctaacaagtgtttatgctagtttattagctg 34403987  T
Q  117 aaataagttaatccaaacatgc 138  Q
    ||||||||||||||||||||||    
T  34403988 aaataagttaatccaaacatgc 34404009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 33080615 - 33080492
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    |||| ||||||| ||||||| | || |  ||||||||||||| || ||||| || |||  | ||||| |||| |||||| ||||||| ||| ||||| ||    
T  33080615 ttatagaaataaactgaaaataacttataaacatgtcataagttggtttcagaaattctattaaacaatctcacaagtgcttatgccagtaaataagctc 33080516  T
Q  117 aaataagttaatccaaacatgccc 140  Q
    |||||||   ||||||||||||||    
T  33080515 aaataagcctatccaaacatgccc 33080492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 696642 - 696692
Alignment:
Q  24 aataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 74  Q
    ||||||||||||| |||| |  |||||||||||||||||||| ||||||||    
T  696642 aataagctgaaaacagcttatgaacatgtcataagctgttttgataagttc 696692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 8420234 - 8420112
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttc 116  Q
    ||||||||||||| |||||| ||||     |||||||||||||| |||  ||||| || | | |||| |||| |||||||||||| |  |||||||| ||    
T  8420234 ttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctc 8420135  T
Q  117 aaat-aagttaatccaaacatgc 138  Q
    |||| |||| |||||||||||||    
T  8420134 aaataaagtcaatccaaacatgc 8420112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 13908496 - 13908562
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaaca 83  Q
    ||||| |||||||||||||| |||| || ||||||||||||||| | ||  ||||||| ||||||||    
T  13908496 ttatgaaaataagctgaaaacagcttacgaacatgtcataagctttcttattaagttctctcaaaca 13908562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 33089568 - 33089658
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacat 136  Q
    |||||||| |||||||||||||||||||| || ||| | |||| ||| |   |||| | ||||||||| |||||||||| || ||||||||    
T  33089568 aacatgtcctaagctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataagtcaacccaaacat 33089658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 13908346 - 13908391
Alignment:
Q  90 caagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    |||||||||||| | |||||||||||||||||||| ||| ||||||    
T  13908346 caagtgtttatgtcagtagataagttcaaataagtcaattcaaaca 13908391  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 24838761 - 24838704
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgcc 103  Q
    |||||||||||| ||||||||| ||| || | |||||| ||||| |||||||||||||    
T  24838761 aacatgtcataatctgttttcacaagctcccccaaacagtctcgaaagtgtttatgcc 24838704  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 33911313 - 33911212
Alignment:
Q  23 aaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataa 122  Q
    |||||||||||||| |||||||  |||||||  ||||| |||||||||| || || ||||| | || | |||| || |||  |||||||| |||||||||    
T  33911313 aaataagctgaaaacagctaacagacatgtccaaagctattttcataagatctcttaaacagtttcacgagtgcttgtgctagtagataaattcaaataa 33911214  T
Q  123 gt 124  Q
    ||    
T  33911213 gt 33911212  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 696483 - 696531
Alignment:
Q  25 ataagctgaaaaaagctaaccaacatgtcataagctgttttcataagtt 73  Q
    ||||||| |||| |||| |  ||||||||||||||||||||||||||||    
T  696483 ataagctaaaaacagcttatgaacatgtcataagctgttttcataagtt 696531  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 725692 - 725608
Alignment:
Q  17 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatg 101  Q
    |||||||||||||||||||| ||   ||  |||||||||||| |||||||||||| || ||| ||  ||||| | ||||||||||    
T  725692 ttatggaaataagctgaaaatagtctacggacatgtcataagttgttttcataagctctctcgaatgttctcacgagtgtttatg 725608  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 740894 - 740798
Alignment:
Q  46 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgcccta 142  Q
    ||||||||||||| ||||| || ||| || |||| || ||||| ||| |||| ||| | ||||||||  |||||||||| ||| |||||| ||||||    
T  740894 aacatgtcataagttgtttccacaagctctctcacactttctcacaaatgttcatgacagtagataatctcaaataagtcaatacaaacaagcccta 740798  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 4516066 - 4516110
Alignment:
Q  91 aagtgtttatgccggtagataagttcaaataagttaatccaaaca 135  Q
    ||||||||||||||||| |||||||||| |||| ||| |||||||    
T  4516066 aagtgtttatgccggtaaataagttcaattaagctaaaccaaaca 4516110  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 12111068 - 12111116
Alignment:
Q  85 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaa 133  Q
    ||||||||||| ||||||  ||||||||| |||||||||| ||||||||    
T  12111068 tctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaa 12111116  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 33116647 - 33116695
Alignment:
Q  47 acatgtcataagctgttttcataagttcactcaaacattctcgcaagtg 95  Q
    |||||||||||| ||||||||||| ||| |||||||| |||| ||||||    
T  33116647 acatgtcataagttgttttcataaattccctcaaacagtctcacaagtg 33116695  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 9668 - 9608
Alignment:
Q  23 aaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttcactcaaaca 83  Q
    ||||||||| |||| |||| |  ||||||| ||||| ||||||||||||||| ||||||||    
T  9668 aaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaaca 9608  T

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