View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15007_high_5 (Length: 404)

Name: NF15007_high_5
Description: NF15007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15007_high_5
NF15007_high_5
[»] chr2 (35 HSPs)
chr2 (20-387)||(34993846-34994212)
chr2 (218-305)||(12224250-12224337)
chr2 (217-302)||(5040760-5040845)
chr2 (217-305)||(2438664-2438752)
chr2 (217-305)||(28596495-28596583)
chr2 (217-284)||(37411210-37411277)
chr2 (174-310)||(37558954-37559096)
chr2 (217-291)||(5367218-5367292)
chr2 (236-310)||(24009340-24009414)
chr2 (240-310)||(26769571-26769641)
chr2 (217-312)||(20242665-20242760)
chr2 (239-310)||(30717459-30717530)
chr2 (217-286)||(18570998-18571067)
chr2 (217-310)||(18840953-18841046)
chr2 (217-306)||(29176437-29176526)
chr2 (177-286)||(31808057-31808172)
chr2 (239-311)||(37419802-37419874)
chr2 (260-310)||(15909570-15909620)
chr2 (221-311)||(15972903-15972993)
chr2 (198-280)||(28677910-28678003)
chr2 (228-310)||(38117099-38117181)
chr2 (239-305)||(44860379-44860445)
chr2 (240-297)||(19942314-19942371)
chr2 (51-108)||(34985703-34985760)
chr2 (239-310)||(32749754-32749825)
chr2 (239-310)||(35056927-35056998)
chr2 (218-303)||(21624294-21624374)
chr2 (177-256)||(31018570-31018655)
chr2 (219-256)||(31855802-31855839)
chr2 (219-256)||(34691799-34691836)
chr2 (219-256)||(34714211-34714248)
chr2 (245-310)||(42511322-42511387)
chr2 (165-217)||(34221536-34221588)
chr2 (216-248)||(44605141-44605173)
chr2 (218-250)||(44860347-44860379)
[»] chr5 (32 HSPs)
chr5 (184-310)||(21576685-21576817)
chr5 (220-305)||(30502333-30502418)
chr5 (220-305)||(30542676-30542761)
chr5 (218-305)||(30098983-30099070)
chr5 (235-305)||(39268543-39268613)
chr5 (217-311)||(43564907-43565001)
chr5 (219-297)||(32630688-32630766)
chr5 (217-305)||(21191001-21191089)
chr5 (165-286)||(42893328-42893455)
chr5 (217-313)||(27932261-27932357)
chr5 (183-302)||(31084309-31084439)
chr5 (239-310)||(39698600-39698671)
chr5 (217-297)||(23015937-23016022)
chr5 (239-303)||(21522809-21522873)
chr5 (239-303)||(21533375-21533439)
chr5 (239-303)||(21542089-21542153)
chr5 (178-310)||(17123029-17123166)
chr5 (239-310)||(21814320-21814391)
chr5 (217-255)||(17925167-17925205)
chr5 (217-259)||(42029778-42029820)
chr5 (217-310)||(21194063-21194156)
chr5 (220-297)||(26312798-26312875)
chr5 (252-297)||(30183621-30183666)
chr5 (217-305)||(4105285-4105373)
chr5 (219-278)||(23012380-23012439)
chr5 (239-297)||(15382533-15382591)
chr5 (217-259)||(28588665-28588707)
chr5 (226-255)||(15874197-15874226)
chr5 (216-257)||(18145296-18145337)
chr5 (217-250)||(18592099-18592132)
chr5 (244-297)||(36642705-36642757)
chr5 (217-277)||(18421814-18421874)
[»] chr6 (53 HSPs)
chr6 (176-310)||(28152078-28152217)
chr6 (174-305)||(17841534-17841671)
chr6 (217-311)||(28715321-28715415)
chr6 (217-286)||(7378005-7378074)
chr6 (217-311)||(33001228-33001322)
chr6 (217-310)||(34595160-34595253)
chr6 (177-310)||(7977770-7977909)
chr6 (217-305)||(32978844-32978932)
chr6 (177-305)||(9658859-9658994)
chr6 (163-305)||(7265538-7265686)
chr6 (239-311)||(8365447-8365519)
chr6 (239-311)||(10339053-10339125)
chr6 (216-291)||(12690441-12690516)
chr6 (251-297)||(21044827-21044873)
chr6 (217-310)||(13360313-13360405)
chr6 (221-265)||(30851630-30851674)
chr6 (239-310)||(3209447-3209518)
chr6 (239-310)||(16488519-16488590)
chr6 (254-297)||(21068085-21068128)
chr6 (217-311)||(4877969-4878062)
chr6 (177-215)||(13689533-13689571)
chr6 (228-310)||(13789191-13789273)
chr6 (228-310)||(13797810-13797892)
chr6 (245-311)||(17327589-17327655)
chr6 (219-305)||(7996327-7996409)
chr6 (219-305)||(8022392-8022474)
chr6 (217-250)||(9617460-9617493)
chr6 (217-250)||(9629409-9629442)
chr6 (183-245)||(30866149-30866217)
chr6 (252-305)||(31384991-31385044)
chr6 (217-297)||(853812-853892)
chr6 (239-311)||(18367895-18367967)
chr6 (239-310)||(7248417-7248488)
chr6 (239-310)||(9107299-9107370)
chr6 (239-286)||(16766756-16766803)
chr6 (217-311)||(6898220-6898314)
chr6 (217-251)||(7027268-7027302)
chr6 (261-303)||(7930371-7930413)
chr6 (177-310)||(9027158-9027286)
chr6 (217-259)||(19040378-19040420)
chr6 (175-254)||(20371106-20371191)
chr6 (223-285)||(23771610-23771672)
chr6 (248-306)||(25096491-25096549)
chr6 (255-305)||(31959214-31959264)
chr6 (261-310)||(7625186-7625235)
chr6 (217-250)||(9025494-9025527)
chr6 (238-271)||(11424679-11424712)
chr6 (261-310)||(25207810-25207859)
chr6 (218-250)||(10294134-10294166)
chr6 (216-311)||(12236683-12236779)
chr6 (219-255)||(21924930-21924966)
chr6 (217-305)||(32298552-32298640)
chr6 (239-310)||(34446618-34446690)
[»] chr3 (34 HSPs)
chr3 (217-311)||(40993274-40993368)
chr3 (217-310)||(35222964-35223057)
chr3 (177-310)||(55401055-55401194)
chr3 (217-297)||(28918027-28918109)
chr3 (217-295)||(10954978-10955056)
chr3 (228-310)||(13845465-13845547)
chr3 (217-310)||(20503491-20503584)
chr3 (217-305)||(25775535-25775621)
chr3 (239-311)||(41961578-41961650)
chr3 (219-310)||(4466540-4466631)
chr3 (217-303)||(3631710-3631796)
chr3 (219-297)||(7171529-7171607)
chr3 (220-288)||(24633363-24633431)
chr3 (246-310)||(34185052-34185116)
chr3 (192-256)||(7928445-7928515)
chr3 (217-305)||(8789493-8789583)
chr3 (252-303)||(15999957-16000008)
chr3 (239-297)||(4987233-4987291)
chr3 (261-311)||(40052382-40052432)
chr3 (217-286)||(18426975-18427044)
chr3 (217-305)||(24204986-24205074)
chr3 (261-310)||(25074865-25074914)
chr3 (219-255)||(13414497-13414533)
chr3 (239-287)||(14832158-14832206)
chr3 (221-273)||(25093532-25093584)
chr3 (228-307)||(2941595-2941674)
chr3 (239-310)||(15796223-15796294)
chr3 (252-310)||(27505312-27505370)
chr3 (261-310)||(21211364-21211413)
chr3 (258-310)||(10455863-10455915)
chr3 (239-311)||(14209172-14209244)
chr3 (245-305)||(14216957-14217017)
chr3 (245-305)||(14223086-14223146)
chr3 (219-255)||(21419450-21419486)
[»] chr1 (53 HSPs)
chr1 (221-311)||(37598861-37598951)
chr1 (183-311)||(5898205-5898339)
chr1 (217-311)||(51410051-51410145)
chr1 (217-310)||(18337355-18337448)
chr1 (217-305)||(29163326-29163414)
chr1 (238-310)||(32461393-32461465)
chr1 (221-305)||(42359394-42359478)
chr1 (217-296)||(40181897-40181976)
chr1 (216-310)||(34712323-34712417)
chr1 (217-310)||(38078601-38078694)
chr1 (219-310)||(52903277-52903365)
chr1 (217-305)||(12918971-12919059)
chr1 (174-310)||(46348323-46348465)
chr1 (182-297)||(2896074-2896195)
chr1 (219-297)||(8842667-8842745)
chr1 (217-297)||(1486657-1486742)
chr1 (217-286)||(1815283-1815352)
chr1 (228-305)||(10577680-10577757)
chr1 (217-310)||(22515827-22515920)
chr1 (217-310)||(30749866-30749959)
chr1 (217-310)||(30771317-30771410)
chr1 (239-311)||(25934675-25934747)
chr1 (217-297)||(40258886-40258966)
chr1 (239-311)||(40917808-40917880)
chr1 (182-250)||(6427335-6427409)
chr1 (239-297)||(6612113-6612171)
chr1 (217-286)||(7353456-7353526)
chr1 (217-310)||(38075909-38076003)
chr1 (219-297)||(39130720-39130798)
chr1 (217-305)||(11412712-11412801)
chr1 (244-305)||(16297226-16297287)
chr1 (239-311)||(9828103-9828175)
chr1 (217-297)||(18190061-18190141)
chr1 (216-283)||(39410667-39410735)
chr1 (261-305)||(48040419-48040463)
chr1 (221-311)||(9690212-9690303)
chr1 (180-215)||(40285695-40285730)
chr1 (239-310)||(47989556-47989627)
chr1 (247-313)||(6427531-6427597)
chr1 (217-295)||(19637794-19637872)
chr1 (239-297)||(21032265-21032323)
chr1 (230-280)||(21530728-21530778)
chr1 (217-286)||(30847683-30847753)
chr1 (261-311)||(46940747-46940797)
chr1 (265-310)||(6574051-6574096)
chr1 (217-286)||(28674826-28674895)
chr1 (157-217)||(31672934-31672995)
chr1 (217-250)||(34371739-34371772)
chr1 (217-250)||(44482256-44482289)
chr1 (262-310)||(5944365-5944413)
chr1 (255-311)||(15765822-15765878)
chr1 (239-286)||(17831486-17831534)
chr1 (217-305)||(26830614-26830701)
[»] chr7 (35 HSPs)
chr7 (217-312)||(15680835-15680930)
chr7 (184-305)||(20549778-20549905)
chr7 (217-305)||(32287408-32287496)
chr7 (177-310)||(598188-598327)
chr7 (240-311)||(7438766-7438837)
chr7 (216-310)||(5835272-5835366)
chr7 (217-310)||(21880178-21880271)
chr7 (177-310)||(24105658-24105797)
chr7 (219-310)||(21864836-21864927)
chr7 (178-310)||(25481883-25482021)
chr7 (245-311)||(5409770-5409836)
chr7 (245-311)||(9778559-9778625)
chr7 (217-311)||(33994238-33994332)
chr7 (217-286)||(27093377-27093446)
chr7 (217-286)||(27184855-27184924)
chr7 (239-310)||(24339701-24339772)
chr7 (198-310)||(42720830-42720948)
chr7 (245-310)||(32093954-32094020)
chr7 (217-310)||(18212973-18213066)
chr7 (220-260)||(26022539-26022579)
chr7 (217-305)||(27732189-27732272)
chr7 (228-310)||(1433491-1433578)
chr7 (232-310)||(5307297-5307375)
chr7 (216-286)||(8234171-8234241)
chr7 (217-283)||(39138470-39138536)
chr7 (252-310)||(43027404-43027462)
chr7 (217-250)||(22602710-22602743)
chr7 (217-286)||(26733330-26733399)
chr7 (217-249)||(640139-640171)
chr7 (219-247)||(3520345-3520373)
chr7 (217-297)||(3554459-3554539)
chr7 (220-276)||(7197271-7197327)
chr7 (239-311)||(8160475-8160547)
chr7 (217-249)||(24146842-24146874)
chr7 (261-305)||(43250074-43250118)
[»] chr4 (37 HSPs)
chr4 (228-310)||(12895214-12895296)
chr4 (217-310)||(23292926-23293019)
chr4 (217-310)||(49431052-49431145)
chr4 (217-286)||(8423682-8423751)
chr4 (217-310)||(28964188-28964281)
chr4 (239-311)||(19482727-19482799)
chr4 (252-310)||(29205529-29205587)
chr4 (239-305)||(30982812-30982878)
chr4 (228-310)||(34306744-34306826)
chr4 (218-311)||(16073421-16073514)
chr4 (217-310)||(715545-715640)
chr4 (217-310)||(752871-752966)
chr4 (220-283)||(19097861-19097924)
chr4 (217-295)||(40224453-40224531)
chr4 (217-267)||(54580006-54580056)
chr4 (262-311)||(16184902-16184951)
chr4 (217-311)||(23861368-23861464)
chr4 (256-305)||(28084589-28084638)
chr4 (217-286)||(40179600-40179669)
chr4 (217-297)||(4157462-4157542)
chr4 (217-305)||(12797283-12797371)
chr4 (217-297)||(21945529-21945609)
chr4 (217-311)||(4672024-4672118)
chr4 (217-311)||(35161062-35161156)
chr4 (242-279)||(903984-904021)
chr4 (217-286)||(9996866-9996935)
chr4 (217-310)||(35157925-35158018)
chr4 (217-250)||(35723384-35723417)
chr4 (217-286)||(40006029-40006098)
chr4 (217-305)||(46715418-46715507)
chr4 (245-305)||(3947706-3947766)
chr4 (217-297)||(4157175-4157255)
chr4 (275-311)||(20633555-20633591)
chr4 (239-311)||(22234818-22234890)
chr4 (261-305)||(22440562-22440606)
chr4 (217-257)||(36409505-36409545)
chr4 (217-257)||(36423671-36423711)
[»] scaffold0050 (1 HSPs)
scaffold0050 (216-305)||(70303-70392)
[»] chr8 (38 HSPs)
chr8 (217-302)||(14134725-14134810)
chr8 (228-305)||(43737756-43737833)
chr8 (239-310)||(22652035-22652106)
chr8 (239-305)||(5813640-5813706)
chr8 (217-311)||(18407745-18407839)
chr8 (215-302)||(126295-126382)
chr8 (217-304)||(33405330-33405417)
chr8 (239-310)||(34450961-34451032)
chr8 (228-310)||(3951476-3951558)
chr8 (217-310)||(4786278-4786371)
chr8 (240-305)||(29447044-29447109)
chr8 (239-311)||(29510232-29510304)
chr8 (261-312)||(22204713-22204764)
chr8 (174-310)||(36450694-36450836)
chr8 (223-305)||(926733-926815)
chr8 (196-250)||(9097854-9097908)
chr8 (262-311)||(13397622-13397671)
chr8 (177-297)||(31556977-31557102)
chr8 (246-310)||(6065586-6065650)
chr8 (217-257)||(31236570-31236610)
chr8 (217-248)||(18964203-18964234)
chr8 (239-310)||(28745557-28745628)
chr8 (239-310)||(29447503-29447574)
chr8 (252-310)||(11944737-11944795)
chr8 (219-249)||(12606830-12606860)
chr8 (217-283)||(20679362-20679428)
chr8 (255-313)||(30067965-30068023)
chr8 (217-254)||(5138828-5138865)
chr8 (220-297)||(8293854-8293931)
chr8 (217-250)||(8847282-8847315)
chr8 (217-250)||(11927086-11927119)
chr8 (262-311)||(13403177-13403226)
chr8 (252-297)||(22943302-22943347)
chr8 (245-310)||(24858070-24858135)
chr8 (217-250)||(26902175-26902208)
chr8 (221-286)||(44462159-44462224)
chr8 (221-286)||(44469692-44469757)
chr8 (261-305)||(44067597-44067641)
[»] scaffold0380 (1 HSPs)
scaffold0380 (224-311)||(8634-8721)
[»] scaffold0652 (1 HSPs)
scaffold0652 (182-305)||(407-536)
[»] scaffold0450 (1 HSPs)
scaffold0450 (239-310)||(8564-8635)
[»] scaffold0083 (1 HSPs)
scaffold0083 (217-310)||(45470-45563)
[»] scaffold0793 (1 HSPs)
scaffold0793 (217-310)||(4821-4916)
[»] scaffold0361 (1 HSPs)
scaffold0361 (217-310)||(14556-14646)
[»] scaffold0053 (1 HSPs)
scaffold0053 (177-286)||(8778-8893)
[»] scaffold0003 (1 HSPs)
scaffold0003 (239-310)||(241653-241724)
[»] scaffold0512 (1 HSPs)
scaffold0512 (228-310)||(4976-5058)
[»] scaffold0306 (1 HSPs)
scaffold0306 (239-305)||(13454-13520)
[»] scaffold0152 (1 HSPs)
scaffold0152 (239-305)||(21807-21873)
[»] scaffold0623 (1 HSPs)
scaffold0623 (242-303)||(5932-5993)
[»] scaffold0171 (1 HSPs)
scaffold0171 (242-311)||(23573-23642)
[»] scaffold0009 (2 HSPs)
scaffold0009 (217-310)||(174493-174586)
scaffold0009 (217-310)||(180006-180099)
[»] scaffold0475 (1 HSPs)
scaffold0475 (228-312)||(3345-3429)
[»] scaffold0376 (1 HSPs)
scaffold0376 (218-250)||(6339-6371)
[»] scaffold0019 (1 HSPs)
scaffold0019 (239-311)||(71784-71856)
[»] scaffold0004 (1 HSPs)
scaffold0004 (163-215)||(92773-92825)
[»] scaffold0697 (1 HSPs)
scaffold0697 (230-280)||(1683-1733)
[»] scaffold0110 (1 HSPs)
scaffold0110 (218-248)||(28877-28907)
[»] scaffold0022 (1 HSPs)
scaffold0022 (216-250)||(99918-99952)
[»] scaffold0044 (1 HSPs)
scaffold0044 (239-303)||(53239-53303)


Alignment Details
Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 20 - 387
Target Start/End: Complemental strand, 34994212 - 34993846
Alignment:
Q  20 tatatatataaagtgaaatgagaatagatacaaagaccaatttgagaaaacatacaaaggacacgacaaataaacctagcaagaattttcacactaaaaa 119  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34994212 tatatatatcaagtgaaatgagaatagatacaaagaccaatttgagaaaacatagaaaggacacgacaaataaacctagcaagaattttcacactaaaaa 34994113  T
Q  120 catatttaactcttacgtatatgcttaacaacctttcgaaacgatctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaaaca 219  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  34994112 cgtatttaactcttacgtatatccttaacaacctttcgaaacgatctatgaagcacggacacggacactgatacgccaacaccgctaataatttgaaaca 34994013  T
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggacgggata 319  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  34994012 taattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcataggacgcgata 34993913  T
Q  320 tatcatgctatgattagtaacatccacaaacactcccacttttctcacacaattaaattgttaagatt 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  34993912 tatcatgctatgattagtaacatccacaaacactcccacttttctcacataattaaa-tgttaagatt 34993846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 12224250 - 12224337
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| ||||||||||| | |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||| ||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 5040760 - 5040845
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtg 302  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||| | |||||||||||| | |||||||||| ||||    
T  5040760 acataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 2438752 - 2438664
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| |||||||| | |||||||||||| ||||||||  |||||||||| |||||||||||||| | |||||||| |||||||    
T  2438752 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgctt 2438664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 28596495 - 28596583
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| ||| |||||||||| |||||||||||| |||||||| |||||||||||| |||||| |||||| | |||||||| |||||||    
T  28596495 acataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgctt 28596583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 37411277 - 37411210
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgccta 284  Q
    |||||||||| ||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  37411277 acataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgccta 37411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 37558954 - 37559096
Alignment:
Q  174 acggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 267  Q
    ||||||| ||||||||| || || |||| |||||||||||| ||      |||||||||||||||||| | |||||||||||| ||  |||| |||||||    
T  37558954 acggacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccg 37559053  T
Q  268 acactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||| || |||||| |||| | |||||||| ||||||| ||||    
T  37559054 acaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 5367218 - 5367292
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaag 291  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  | |||||| | |||||||||||||| ||||    
T  5367218 acataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 24009340 - 24009414
Alignment:
Q  236 tatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| ||||||| ||||    
T  24009340 tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 26769571 - 26769641
Alignment:
Q  240 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||| | |||||||| ||||||| ||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 20242760 - 20242665
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 312  Q
    |||||||||| ||||||||||||||||||||||| |||| ||| ||||| |||||  |||||||||| || | | ||||||  |||||| ||||||    
T  20242760 acataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatagga 20242665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 30717530 - 30717459
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||||| |||||||||| ||||||| ||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 18570998 - 18571067
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |  | ||||||||  |||||||||||||    
T  18570998 acataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacaccaggacacgcctaat 18571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 18841046 - 18840953
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | |||||||| | |||||||||||  ||||||||  |||||||||| ||||||| |||||| | |||||||| ||||||| ||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 29176526 - 29176437
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttt 306  Q
    |||||||||| |||||||||| |||| ||||| | ||||| ||  |||||||||||| ||||| |||||| |||| ||||||||| ||||    
T  29176526 acataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgttcgtacttt 29176437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 31808057 - 31808172
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    ||||| |||||||| ||||| |||||||||||||||| | |      ||||||||| |||||||||||||||| |||| ||||||||||  ||| |||||    
T  31808057 gacattgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgaca 31808156  T
Q  271 ctgggacacgcctaat 286  Q
    |  |||||| ||||||    
T  31808157 cctggacacacctaat 31808172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 37419802 - 37419874
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| ||||||   ||||||||||| |||||||||||||| | |||||||| ||||||| |||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 37419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 15909620 - 15909570
Alignment:
Q  260 tgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  15909620 tgtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 15972903 - 15972993
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||| |||||||| | |||||||||||| |||||||| ||||||||| | ||||||| |||||| | | || ||| ||||||| |||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 28677910 - 28678003
Alignment:
Q  198 acaccgctaataatttgaaa------cataattcaatgtaattatatgt-----gtcggtgtcgaacacgacatgtgtccgacactgggacacg 280  Q
    ||||||||||||||||||||      ||||||||| |||||||||||||     ||||||||| ||||||||| ||||||||||| ||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgttcggtgtcggtgtcaaacacgacaagtgtccgacacagggacacg 28678003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 38117181 - 38117099
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | |||| ||||||| |||| ||| ||||||||||| |||||||||||||| | ||| |||| ||||||| ||||    
T  38117181 tgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 44860379 - 44860445
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||| ||||| | |||||||||||||||||||  ||||||| |||||||| |||||||| |||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgctt 44860445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 19942314 - 19942371
Alignment:
Q  240 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    ||||||||||| ||||| |||||||| ||||| |||||||||||||| | ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgt 19942371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 34985760 - 34985703
Alignment:
Q  51 aaagaccaatttgagaaaacatacaaaggacacgacaaataaacctagcaagaatttt 108  Q
    |||||||||||||| || |||||||||||||| ||||| | || ||||||||||||||    
T  34985760 aaagaccaatttgacaatacatacaaaggacaagacaagttaaactagcaagaatttt 34985703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 32749825 - 32749754
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| ||||| ||  |||||||||||||||||||||||||||| ||  ||||||||| || |||| ||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 35056927 - 35056998
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||| ||||||||||| |  |||||||||||   |||||||| ||||||| ||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 21624294 - 21624374
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    ||||||||| |||||||| | ||||||||||||     |||| ||||||||||  ||||||| |||||| |||||||||| |||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 31018570 - 31018655
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataattt--gaa----acataattcaatgtaattatatgtgtcggtgtcgaacacg 256  Q
    |||||||||||||| || |||||||||||||||||||  |||    |||| ||| | |||||||||| |||||||||||| |||||    
T  31018570 gacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggacacg 31018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 31855839 - 31855802
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacg 256  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31855839 ataattcagtgtaattagatgtgtcggtgtcgaacacg 31855802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 34691836 - 34691799
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacg 256  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  34691836 ataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 34714248 - 34714211
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacg 256  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  34714248 ataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 42511387 - 42511322
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| |||| ||| ||||||||||| |||||||| ||||| | |||||||| ||||||| ||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 34221588 - 34221536
Alignment:
Q  165 ctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaaa 217  Q
    |||||||||||||||| ||| |||||||  || |||| |||||||||||||||    
T  34221588 ctatgaagcacggacacggatactgatatgccgacacagctaataatttgaaa 34221536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 44605173 - 44605141
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgt 248  Q
    |||||||||||||||||||| ||||||||||||    
T  44605173 aacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 44860347 - 44860379
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||| |||||||||||||||||||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 21576817 - 21576685
Alignment:
Q  184 acactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggac 277  Q
    |||||||||| ||||||| |||||||||||||||      ||||||||| |||||||| | |||||| ||||| |||||||| ||||| |||||||||||    
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggac 21576718  T
Q  278 acgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||| | |||||||| ||||||| ||||    
T  21576717 acgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 30502418 - 30502333
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||| |||||| |||||||||||    
T  30502418 taattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgctt 30502333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 30542761 - 30542676
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||| |||||| |||||||||||    
T  30542761 taattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgctt 30542676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 30099070 - 30098983
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||  ||||||||||||||||||||||| | |||||| ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgctt 30098983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 39268613 - 39268543
Alignment:
Q  235 atatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  39268613 atatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgctt 39268543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 43564907 - 43565001
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||||||||| | |||||||||||||| | || ||||| ||||||| |||||    
T  43564907 acataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatagg 43565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 32630766 - 32630688
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    ||||||||||||||||||||||||| |||||| | |||||| |||||||||| || ||||| |||||||| ||||||||    
T  32630766 ataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgt 32630688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 21191089 - 21191001
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| |||||||| | |||||||||||| |||| ||| ||||||||| | |||||||||||||| | |||||||| |||||||    
T  21191089 acataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgctt 21191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 42893328 - 42893455
Alignment:
Q  165 ctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaa------acataattcaatgtaattatatgtgtcggtgtcgaacacgac 258  Q
    |||||||||||||| |||||||| || ||||| |||| ||||||||||||||      ||||||| || |||||||| | |||||||||||  |||| ||    
T  42893328 ctatgaagcacggatatggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaac 42893427  T
Q  259 atgtgtccgacactgggacacgcctaat 286  Q
    | |||||||||||  |||||||||||||    
T  42893428 acgtgtccgacaccaggacacgcctaat 42893455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 27932261 - 27932357
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggac 313  Q
    |||||||||| |||||||| |  | | ||||||| |||||||| ||||| |||||  ||||||||||||||| ||||||||| |||||| |||||||    
T  27932261 acataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcataggac 27932357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 31084309 - 31084439
Alignment:
Q  183 gacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcg-----gtgtcgaacacgacatgtgtccgacac 271  Q
    |||||||| || || |||| |||||||||||||||      |||||||||||||||||| | ||||||     |||||| |||||||| |||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacac 31084408  T
Q  272 tgggacacgcctaattcaaggagtgttcgtg 302  Q
    ||||||| ||||||| | |||||||| ||||    
T  31084409 tgggacatgcctaatccgaggagtgtccgtg 31084439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 39698600 - 39698671
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| ||||||||||| |||||||| | |||||||||||| | |||||||| ||||||| ||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 23016022 - 23015937
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgt-----cgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| |||||||||| |||||| |||     || ||||||||||||||||||| ||||||||||||||| | ||||||||    
T  23016022 acataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgt 23015937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 21522809 - 21522873
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| ||| |||||| |||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21522873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 21533375 - 21533439
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| ||| |||||| |||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 21542089 - 21542153
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||||| |||||||| ||||||||||| |||||||||| ||| |||||| ||| |||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgc 21542153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 17123029 - 17123166
Alignment:
Q  178 acatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacac 271  Q
    ||||||||||||| || ||||||||||||||||||||| |      ||||||  | |  |||||||| ||||||||| | |||||| |  ||||||||||    
T  17123029 acatggacactgacacgccaacaccgctaataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttggacacgaaacatgtccgacac 17123128  T
Q  272 tgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
     |||||||||||||| | |||||||| ||||||| ||||    
T  17123129 -gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 21814320 - 21814391
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||| ||||| | ||| ||||||||||| || |||||| ||||||||||| ||||    
T  21814320 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 17925205 - 17925167
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacac 255  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  17925205 acataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 42029778 - 42029820
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgaca 259  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  42029778 acataattcaatgtaattatatgtatcggtgtcggacacgaca 42029820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 21194156 - 21194063
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||| ||||| |||||||||| || | ||||| | ||||||||  |||| ||||| ||| |||||||||| | |||||||| ||||||||||||    
T  21194156 acatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 26312798 - 26312875
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    ||||||| ||||||||||||| ||||||||| |||||| | ||||| |||||  |||||| |||||| | ||||||||    
T  26312798 taattcagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 30183621 - 30183666
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||| |||||||||||||||||||||||||||| || |||||    
T  30183621 acacgacacgtgtccgacactgggacacgcctaattcgagaagtgt 30183666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 4105285 - 4105373
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| |||||||| | |||| ||| ||  || ||| ||||||| || ||||||||||||||||| | |||||||| |||||||    
T  4105285 acataattcagtgtaattacaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgctt 4105373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 23012439 - 23012380
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggaca 278  Q
    |||||| ||||||||||||||||||||||| | ||||||||  |||| ||||| ||||||    
T  23012439 ataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 15382533 - 15382591
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| | ||||||||  |||||||||| |||||||||||||| | ||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgt 15382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 28588707 - 28588665
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgaca 259  Q
    |||||||||| |||||||||| |||||||||||| ||||||||    
T  28588707 acataattcagtgtaattataggtgtcggtgtcggacacgaca 28588665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 255
Target Start/End: Complemental strand, 15874226 - 15874197
Alignment:
Q  226 aatgtaattatatgtgtcggtgtcgaacac 255  Q
    ||||||||||||||||||||||||||||||    
T  15874226 aatgtaattatatgtgtcggtgtcgaacac 15874197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 18145337 - 18145296
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaacacga 257  Q
    |||||||||||||||||| |||||||| |||||| |||||||    
T  18145337 aacataattcaatgtaatcatatgtgttggtgtcaaacacga 18145296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 18592099 - 18592132
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||||||||||||||||||| ||||||||    
T  18592099 acataattcaatgtaattatatgtgccggtgtcg 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 36642757 - 36642705
Alignment:
Q  244 ggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||  ||||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgt 36642705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 18421874 - 18421814
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggac 277  Q
    ||||||| || |||||||||||||||||| |||| ||||||||  |||||| ||| |||||    
T  18421874 acataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgggac 18421814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 28152078 - 28152217
Alignment:
Q  176 ggacatggacactgatacaccaacaccgctaataatttgaaa-----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    ||||| ||||||||| || || |||  |||||||||||||||     ||||||||| |||||||| | |||||||||||| |||||||| ||||||||||    
T  28152078 ggacacggacactgacacgccgacaaagctaataatttgaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 28152177  T
Q  271 ctgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    | |||||| ||||||| | |||||||||||||||| ||||    
T  28152178 ccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 17841671 - 17841534
Alignment:
Q  174 acggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 267  Q
    ||||||| ||||||||| || || |||| |||||||||||||||      ||||||| | |||||||| | ||| |||||||| ||||||||||||||||    
T  17841671 acggacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccg 17841572  T
Q  268 acactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| |||||||||||| | |||||||| |||||||    
T  17841571 acactgagacacgcctaatccgaggagtgtccgtgctt 17841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 28715321 - 28715415
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| |||||||| | |||||||||||| |||||||| |||| |||||| |||||||||||||||| || ||||| ||||||| |||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatagg 28715415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 7378005 - 7378074
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||| |||||    
T  7378005 acataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaat 7378074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 33001322 - 33001228
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| |  | ||||||||| ||| ||||||| |||||| |||||    
T  33001322 acataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcatagg 33001228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 34595160 - 34595253
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||||||||||| |||||||| ||||| ||||| ||||||| |||||| | |||||||| ||||||| ||||    
T  34595160 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 310
Target Start/End: Complemental strand, 7977909 - 7977770
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||||||| ||||| || || |||| |||||||||||||||      ||||||||| |||||||| | |||||||||||| |||| |||| |||||||||    
T  7977909 gacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgaca 7977810  T
Q  271 ctgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
      |  |||||||||||  ||||||||||||||||| ||||    
T  7977809 acgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 32978932 - 32978844
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||| | |||||||| | |||||||||||| ||||||||  |||||||||| |||||||| ||||| |||||||||| |||||||    
T  32978932 acataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgctt 32978844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 305
Target Start/End: Original strand, 9658859 - 9658994
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataattt--gaaa----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||| ||||||||| || || ||||||||||||||||  ||||    ||||||||| ||||||||||| |||||||||   |||||||| ||||| ||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgaca 9658958  T
Q  271 ctgggacacgcctaatt-caaggagtgttcgtgctt 305  Q
    | || |||||||||||| |||||||||| |||||||    
T  9658959 ccggaacacgcctaattccaaggagtgtccgtgctt 9658994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 305
Target Start/End: Complemental strand, 7265686 - 7265538
Alignment:
Q  163 atctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacg 256  Q
    |||||||||||||| |   ||||||||| || ||||||||||||||||||||| |      ||||||||| ||||||||||||||||||||||| ||||     
T  7265686 atctatgaagcacgtattcggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaca 7265587  T
Q  257 acatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    | |  |||||||||| || | | ||||||| | ||||| || |||||||    
T  7265586 atacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgctt 7265538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 8365519 - 8365447
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||| | |||||| | ||||||| |||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatagg 8365447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 10339125 - 10339053
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||   |||||||| ||||||| |||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagg 10339053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 12690441 - 12690516
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaag 291  Q
    ||||||||||||||||||||||||||||| ||||| |||| |||||||||  |||   | ||||||||||||||||    
T  12690441 aacataattcaatgtaattatatgtgtcgatgtcggacactacatgtgtctaacatcagaacacgcctaattcaag 12690516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 21044873 - 21044827
Alignment:
Q  251 aacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  21044873 aacacgacatgtgtccgacactgggacacgcctaatctaaggagtgt 21044827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 13360405 - 13360313
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| ||||||||||||| ||||||||  |||| |||  |||||||||||| |||||||||||| | | |||||| ||||||| ||||    
T  13360405 acataattcagtgtaattatatgtttcggtgtcagacacaacaa-tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtc 265  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 3209447 - 3209518
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||| ||||||||||||||| | |||||||||  ||||||||||||| | ||||||||| |||||| ||||    
T  3209447 gtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 16488590 - 16488519
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||| ||||| | ||| ||||||||||| || |||||| ||||||||||| ||||    
T  16488590 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 21068128 - 21068085
Alignment:
Q  254 acgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  21068128 acgacatgtgtccgacactgggacacgcctaatctaaggagtgt 21068085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 4877969 - 4878062
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| | | |||||| | |||||||||||| ||||||||  ||||||||||  ||||||||||||| | |||||||| ||||||| |||||    
T  4877969 acataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatagg 4878062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 13689571 - 13689533
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttga 215  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13689571 gacatggacactgatacatcaacaccgctaataatttga 13689533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 13789191 - 13789273
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||| ||  ||||| ||| |||| ||||| ||||  |||| |||||| ||||||||||||||||||||| ||||    
T  13789191 tgtaattatatgtatcaatgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcatag 13789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 13797810 - 13797892
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||| ||  ||||| ||| |||| ||||| ||||  |||| |||||| ||||||||||||||||||||| ||||    
T  13797810 tgtaattatatgtatcaatgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcatag 13797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 17327655 - 17327589
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||| |||||||| ||||| ||||| |||||||||||||| | |||||||| ||||||| |||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatagg 17327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 7996409 - 7996327
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||| |||||||||||| ||||||||||    ||||| |||||  |||| |||||||||||||| |||||||| | |||||||    
T  7996409 ataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgctt 7996327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 8022392 - 8022474
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||| |||||||||||| ||||||||||    ||||| |||||  |||| |||||||||||||| |||||||| | |||||||    
T  8022392 ataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgctt 8022474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 9617460 - 9617493
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||||||||||||||||||||||||||||    
T  9617460 acataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 9629409 - 9629442
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||||||||||||||||||||||||||||    
T  9629409 acataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 30866217 - 30866149
Alignment:
Q  183 gacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcgg 245  Q
    ||||| || |||||||||||||||||||||||| |      ||||||||||||||||||||||||||||    
T  30866217 gacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 31384991 - 31385044
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||| |||||| |||| |||||||||||||| |||||||||| |||||||    
T  31384991 acacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgctt 31385044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 853892 - 853812
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||| | || ||||| | |||||||||||| | |||||||||||||||||  | |||||||||||| ||| ||||||    
T  853892 acataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatccaatgagtgt 853812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 18367895 - 18367967
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||  ||||||||  |||| ||||| ||||||||||| || |||||||||| ||||||| |||||    
T  18367895 gtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagg 18367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 7248417 - 7248488
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| | |||| ||||||||||||||| |||||||| | ||| | |||||||| ||||||| ||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 9107370 - 9107299
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||| || |||||||||||| ||||||| |||||| | |||||||  ||||||| ||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 16766756 - 16766803
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaat 16766803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 6898314 - 6898220
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| | |||||||| | |||||||||||| ||||||   |||||| |||| |  ||||||||||| | | |||||||||||||| |||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatagg 6898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 7027268 - 7027302
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcga 251  Q
    |||||||||| ||||||||||||||||||||||||    
T  7027268 acataattcagtgtaattatatgtgtcggtgtcga 7027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 7930371 - 7930413
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||||  ||||||||||||||| ||||||||||||||    
T  7930371 gtgtccgacaccaggacacgcctaattcgaggagtgttcgtgc 7930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 310
Target Start/End: Original strand, 9027158 - 9027286
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||| ||||||||| || || |||||||||||||||||| |      ||||||||  |||||||||||||||||||||||           |||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg-----------tgtccgaca 9027246  T
Q  271 ctgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    | |||||||| ||||| ||||||||||| |||||| ||||    
T  9027247 ccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 19040378 - 19040420
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgaca 259  Q
    |||||||||| |||||||||||||||| |||||| ||||||||    
T  19040378 acataattcagtgtaattatatgtgtctgtgtcggacacgaca 19040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 20371191 - 20371106
Alignment:
Q  175 cggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaaca 254  Q
    |||||| ||||| ||| || || |||||||||||||||||| |      ||||| ||||||| |||||||||||||||||||||||    
T  20371191 cggacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcgaaca 20371106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 23771610 - 23771672
Alignment:
Q  223 ttcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaa 285  Q
    |||| |||||||| |  ||||||||||| |||||||||||||||||||| | |||||| ||||    
T  23771610 ttcagtgtaattacaaatgtcggtgtcggacacgacatgtgtccgacacagagacacgtctaa 23771672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 25096491 - 25096549
Alignment:
Q  248 tcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttt 306  Q
    ||||| |||||| |||||| ||||||||||||| ||||||| |||| |||| |||||||    
T  25096491 tcgaaaacgacacgtgtcccacactgggacacgtctaattcgaggaatgtttgtgcttt 25096549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 31959214 - 31959264
Alignment:
Q  255 cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||||||||||| ||||||| |||||| | |||||||| |||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt 31959264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 7625186 - 7625235
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||| || |||||| |||| |||||||||||||||||| ||||    
T  7625186 gtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatag 7625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 9025527 - 9025494
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  9025527 acataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 11424712 - 11424679
Alignment:
Q  238 tgtgtcggtgtcgaacacgacatgtgtccgacac 271  Q
    ||||||||||||||||||||||||||||| ||||    
T  11424712 tgtgtcggtgtcgaacacgacatgtgtccaacac 11424679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 25207810 - 25207859
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||| ||||||||||||||   |||||||||| ||||||||||    
T  25207810 gtgtccgacaccgggacacgcctaatatgaggagtgttcatgctttatag 25207859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 10294134 - 10294166
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||| ||||||||||||||||||||||||||||    
T  10294134 catatttcaatgtaattatatgtgtcggtgtcg 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 12236683 - 12236779
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||||||||||||  ||||||||| |||  |||| |||||  ||| || ||| |||||||||||||    |||||||||||||||| |||||    
T  12236683 aacataattcaatgtaatcgtatgtgtcgatgttaaacaccgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcatagg 12236779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 21924966 - 21924930
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacac 255  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  21924966 ataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 32298640 - 32298552
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||| | ||||||||||||||| ||||||  ||| ||||| ||||| ||||  | ||||||||||||  | |||||||| |||||    
T  32298640 acataatttagtgtaattatatgtgttggtgtcagacatgacatatgtccaacaccagaacacgcctaatttgatgagtgttcatgctt 32298552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 34446618 - 34446690
Alignment:
Q  239 gtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||| ||||| |||  || || ||||||||||||| |||||| |||||||||| ||||||| ||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 40993368 - 40993274
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||| | |||||||| | ||||| |||||    
T  40993368 acataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatagg 40993274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 35222964 - 35223057
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||| ||||||||| | || | |||||||| ||||||| ||||    
T  35222964 acataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 310
Target Start/End: Original strand, 55401055 - 55401194
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||| |||||||||||| || ||||  ||||||||||||||      ||||||| | |||||||| | |||||||||||| |||||||| ||||||||||    
T  55401055 gacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 55401154  T
Q  271 ctgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    | | |||||||||||| | |||||||| ||||||| ||||    
T  55401155 ccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 28918027 - 28918109
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcga--acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| |||||||| | ||||||||||||   |||||||| |||||||||||||||||||||||||| ||||||||||    
T  28918027 acataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgt 28918109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 10954978 - 10955056
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 295  Q
    |||||||||| |||||| | | |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||    
T  10954978 acataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 13845547 - 13845465
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||||||||||||| |||||| | ||||| ||||| | ||||||||| || |||||||||| ||||||| ||||    
T  13845547 tgtaattatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 20503491 - 20503584
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||||||||| | ||||||||  |||| ||||| |||||||||||||| | |||||||| ||||||| ||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 25775535 - 25775621
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| |||||||| | |||||||||||| ||||| |  |||||||||||  ||||||||||||| | ||||||||||||||||    
T  25775535 acataattcagtgtaattacaagtgtcggtgtcggacacgtc--gtgtccgacaccaggacacgcctaatccgaggagtgttcgtgctt 25775621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 41961650 - 41961578
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||| | || ||||| ||||||| |||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagg 41961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 4466631 - 4466540
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| ||||  |||||||| |||||||| | || | |||||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  4466631 ataattcagtgtagctatatgtgccggtgtcggatacaagatgtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 3631710 - 3631796
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||| |||||||||||||| | |||||| ||||||||  ||||||||||  ||||||||||| | | |||||||| |||||    
T  3631710 acataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 7171529 - 7171607
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||  |||||||| | |||| ||||||| |||||||| ||||||||||| | |||||||||||| ||||||||||    
T  7171529 ataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 24633431 - 24633363
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattc 288  Q
    ||||||||||||||||||||||||||||| | ||||||||  ||||  |||| || |||||||||||||    
T  24633431 taattcaatgtaattatatgtgtcggtgttggacacgacacttgtctaacaccggtacacgcctaattc 24633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 34185116 - 34185052
Alignment:
Q  246 tgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||| ||| |||||||||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 7928445 - 7928515
Alignment:
Q  192 acaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacg 256  Q
    ||||| ||||||||||||||||||||      ||||||||| ||||||||||||||||||||||| |||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 8789583 - 8789493
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacg--acatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||  ||||||||||||||||||||||| |||||  |||  |||| ||||| | |||||||||||| | |||||||| |||||||    
T  8789583 acataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgctt 8789493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 16000008 - 15999957
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc 15999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 4987291 - 4987233
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| | |||||||| ||||||||||| |||||||||||||| | ||||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 4987233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 40052382 - 40052432
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| |||||    
T  40052382 gtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatagg 40052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 18426975 - 18427044
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||  ||||||||||| ||||||||||| | |||||| ||||||| ||| ||||||| ||||||    
T  18426975 acataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaat 18427044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 24205074 - 24204986
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||| || |||||||||| |||||| ||||| |||| |||  |||||||||||  ||||||||||||||| |||||||| |||||||    
T  24205074 acataatacagtgtaattataagtgtcg-tgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 24204986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 25074865 - 25074914
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||||||||| |||||| | |||||||||||||||| ||||    
T  25074865 gtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 13414497 - 13414533
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacac 255  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13414497 ataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 14832158 - 14832206
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaatt 287  Q
    |||||||| ||| |||||||| ||||||||||| |||||||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaatt 14832206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 25093532 - 25093584
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactg 273  Q
    |||||| ||||||||||||||||||||||| |||| |||  ||||||||||||    
T  25093532 aattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacactg 25093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 2941595 - 2941674
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttta 307  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||  |||| | |||| || |||| | |||| ||||||||    
T  2941595 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacatggggatatgccttatccaagaaatgtttgtgcttta 2941674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 15796294 - 15796223
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||| ||||||| |||| ||| |||||| |||| || ||||||||||| ||| |||||||||||||| ||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 310
Target Start/End: Original strand, 27505312 - 27505370
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| ||||||||||| |||||| ||||||| | |||||||| ||||||| ||||    
T  27505312 acacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 21211364 - 21211413
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||||||||| |||||| | ||||||||| |||||| ||||    
T  21211364 gtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 10455863 - 10455915
Alignment:
Q  258 catgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||||||||||||||  |||| ||||||||||  |||||| ||||    
T  10455863 catgtgtccgacactgggacacgtttaatccaaggagtgtatgtgcttcatag 10455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 14209172 - 14209244
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| |||||||| |||| |||||  |||| || |||||| |||| ||||| ||||||| |||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatagg 14209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 14216957 - 14217017
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| |||||||| |||| |||||||||||||| |||||| | || ||||| |||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgctt 14217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 14223086 - 14223146
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| |||||||| |||| |||||||||||||| |||||| | || ||||| |||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgctt 14223146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 21419486 - 21419450
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacac 255  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  21419486 ataattcaatgtaattatatatgttggtgtcgaacac 21419450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 37598861 - 37598951
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||| |||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||||| | |||||||| ||||||| |||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 5898339 - 5898205
Alignment:
Q  183 gacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggga 276  Q
    |||||||| || || |||||||||||||| |||||      ||||||||| |||||||||||| |||||||||  |||||||| |||||| |||| ||||    
T  5898339 gacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccggga 5898240  T
Q  277 cacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||| ||||| | |||||||| |||||||||||||    
T  5898239 cacgtctaatccgaggagtgtccgtgctttatagg 5898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 51410051 - 51410145
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| |||||||| | |||||||||||| |||||||| || |||||||| | |||||||||||| |||||||| ||||||||| |||||    
T  51410051 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatagg 51410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 18337355 - 18337448
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||||||||||| |||| ||| |||||||||||||||||| |||| || | |||||||| ||||||| ||||    
T  18337355 acataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 29163414 - 29163326
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||| | ||||| |||||||| |||||   || |||||||||||||    
T  29163414 acataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgctt 29163326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 32461465 - 32461393
Alignment:
Q  238 tgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||| |||| ||||| ||||||| ||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 42359478 - 42359394
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| |||||||| | |||||||||||| ||| ||| |||||||||||| |||||||||||||| | |||||||| |||||||    
T  42359478 aattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgctt 42359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 40181897 - 40181976
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtg 296  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||| |||||| |||| |||||||||||||| | |||||||    
T  40181897 acataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 34712417 - 34712323
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||| | |||||||||||||||| ||||||     |||| |||||| ||||||||||||| |||||||||||||||| ||||||| ||||    
T  34712417 aacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 38078694 - 38078601
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||||||||||| | |||||||||||| ||||||||  ||| | ||||  ||||||||||||| | |||||| ||||||||| ||||    
T  38078694 acataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 52903277 - 52903365
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| ||||||||||||||||||||||| |||||   |||||||||||| |||||||| || |||| | |||||| ||||||| ||||    
T  52903277 ataattcagtgtaattatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 12918971 - 12919059
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| ||||| |||||||| || || | || |||||||||||||    
T  12918971 acataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgctt 12919059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 46348465 - 46348323
Alignment:
Q  174 acggacatggacactgatacaccaacaccgctaataatttgaaaca------taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 267  Q
    ||||||| ||||||||| || || |||| ||||||||||||||| |      ||||| | |||||||| | |||||||||||| |||||||| |||||||    
T  46348465 acggacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccg 46348366  T
Q  268 acactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||| | ||||||||| || | ||| |||| ||||||| ||||    
T  46348365 acaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 2896195 - 2896074
Alignment:
Q  182 ggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggg 275  Q
    ||||||||| || || |||||||||||||||||| |      ||||||||| ||||  ||||| ||||||||||  ||||||||||||||||| || |||    
T  2896195 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccggg 2896096  T
Q  276 acacgcctaattcaaggagtgt 297  Q
    |||| |||||| |||| |||||    
T  2896095 acacacctaatccaagaagtgt 2896074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 8842745 - 8842667
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||| ||||||||||||||| | ||||||| |||||||| || |||||||   ||||||||||||||||| ||||||    
T  8842745 ataatttaatgtaattatatgtattggtgtcggacacgacacgtatccgacatcaggacacgcctaattcaaagagtgt 8842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 1486742 - 1486657
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcga-----acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| |||||||||| ||||||||||||      |||||||| ||||||||||| |||||||||||||| | ||||||||    
T  1486742 acataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 1486657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 1815283 - 1815352
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||| |||||||| | |||||||||||  ||||||||  |||||||||| ||||||||||||||    
T  1815283 acataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaat 1815352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 10577757 - 10577680
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||||||||| | || |||||||  ||||| ||||| ||||||||||| || |||||||||| |||||||    
T  10577757 tgtaattatatgtgtcgggggcggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 10577680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 22515920 - 22515827
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | |||||||| | |||||||||||| ||||||||  | |||||||| | |||||||||||| | |||||||| ||||||| ||||    
T  22515920 acataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 30749866 - 30749959
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||  ||| |||| | |||| |||||||| | ||||| ||||    
T  30749866 acataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatgcttcatag 30749959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 30771317 - 30771410
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||  ||| |||| | |||| |||||||| | ||||| ||||    
T  30771317 acataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatgcttcatag 30771410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 25934675 - 25934747
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| |||||||| ||||| ||||| |||| |||||| || |||||||||| ||||||| |||||    
T  25934675 gtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatagg 25934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 40258966 - 40258886
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| |||||||| | |||||||||||  ||||||||  ||||||||||  ||||||||||||| | ||||||||    
T  40258966 acataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgt 40258886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 40917808 - 40917880
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| | |||||||| ||||||||||| |||||||||||||| | |||| ||| ||||||| |||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatagg 40917880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 6427335 - 6427409
Alignment:
Q  182 ggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||| || ||||||||||||||||||||| |      ||||||||||||||||||||||||| |||||||    
T  6427335 ggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 6612171 - 6612113
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||| ||||| |||||| |||||||||||||  ||||||||||||| ||||||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgt 6612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 7353526 - 7353456
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatg-tgtccgacactgggacacgcctaat 286  Q
    |||||||| | ||||||||||| ||||||||||||||| |||| | | |||||||||| ||||||||||||    
T  7353526 acataatttagtgtaattatatatgtcggtgtcgaacatgacacgttttccgacactgagacacgcctaat 7353456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 38076003 - 38075909
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| ||| |||||| |||||||||||||||| ||| |||  |||| ||||||| |||||||||||||||  |||||||| | ||||| ||||    
T  38076003 acataagtcagtgtaatcatatgtgtcggtgtcggacatcgatgtgtgaccgacaccgggacacgcctaatttgaggagtgtacatgcttcatag 38075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 39130798 - 39130720
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||| | ||||||||||||||||||||||| |||| ||| |||  ||||| |||||||||| |||| ||| ||||||    
T  39130798 ataatttagtgtaattatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgt 39130720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 11412801 - 11412712
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacga-catgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||||| || ||| |||||||||| | |||| | ||||||||||||||| ||||| |||| || | |||||||| |||||||    
T  11412801 acataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgctt 11412712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 16297287 - 16297226
Alignment:
Q  244 ggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||| ||||||| ||||||||||||  ||||||||||||| | |||||||| |||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgctt 16297226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 9828103 - 9828175
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||| |||||  |||||||| ||||||||||| |||||||| ||||| | |||||||| ||||||| |||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagg 9828175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 18190141 - 18190061
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| |||||||| | |||||| ||||  |||| ||| ||||||||||| ||||||| |||||| | ||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 39410667 - 39410735
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcct 283  Q
    ||||||||||||||||| || |||||| ||||||| |||  |||||||||| |||||||||||| ||||    
T  39410667 aacataattcaatgtaactacatgtgttggtgtcggacattgacatgtgtcagacactgggacatgcct 39410735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 48040463 - 48040419
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||||||||||||||||||  |||||||| |||||||    
T  48040463 gtgtccgacactgggacacgcctaattggaggagtgtccgtgctt 48040419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 311
Target Start/End: Complemental strand, 9690303 - 9690212
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||| |||||| ||||||||||| ||||  ||| |||| ||||||||||| |||||||||||||| |   ||||||| |||||| |||||    
T  9690303 aattcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatagg 9690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 40285730 - 40285695
Alignment:
Q  180 atggacactgatacaccaacaccgctaataatttga 215  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40285730 atggacactgacacaccaacaccgctaataatttga 40285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 47989556 - 47989627
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| ||||||||  |||| ||||  |||||||||||||| | |||||||| ||||||| ||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 6427531 - 6427597
Alignment:
Q  247 gtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggac 313  Q
    |||| |||||||| ||||||||||| ||||||||||||||   | |||||| ||||||| |||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcataggac 6427597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 19637794 - 19637872
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 295  Q
    |||| |||||||||||| |||||||||||||||| |||||| |  | |||||||| ||||| | |||||| | ||||||    
T  19637794 acattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagt 19637872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 21032265 - 21032323
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||| ||||||| |||||||||||||||||||  | || ||||||||| ||||||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgt 21032323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 21530728 - 21530778
Alignment:
Q  230 taattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacg 280  Q
    |||||||| |||||||||||| ||||||||  ||||||||||| |||||||    
T  21530728 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 30847753 - 30847683
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcctaat 286  Q
    ||||||||||||||||| ||||||||| |||| ||||| |||  ||||||||||||| | |||| ||||||    
T  30847753 acataattcaatgtaatcatatgtgtcagtgttgaacaccgatgtgtgtccgacactagaacacacctaat 30847683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 46940797 - 46940747
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||||| || ||||||||||| | |||||||||||||||| |||||    
T  46940797 gtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  265 ccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 28674826 - 28674895
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||| | ||||||||| ||| ||||||  ||||||||  ||||| |||||| ||||||||||||    
T  28674826 acataattcagtataattatatatgttggtgtcagacacgacacttgtccaacactgagacacgcctaat 28674895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 31672995 - 31672934
Alignment:
Q  157 gaaacgatctatgaagcacggacatgg-acactgatacaccaacaccgctaataatttgaaa 217  Q
    |||| ||||||||||||||||| | || ||||||| ||||| |||| |||||||||||||||    
T  31672995 gaaaggatctatgaagcacggatacgggacactgacacaccgacacagctaataatttgaaa 31672934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 34371739 - 34371772
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  34371739 acataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 44482256 - 44482289
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  44482256 acataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 5944365 - 5944413
Alignment:
Q  262 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||| ||||||||| | |||||||||||||||| ||||    
T  5944365 tgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 15765822 - 15765878
Alignment:
Q  255 cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||| |||||| |||||||||||||||||||| | | |||||| ||||||| |||||    
T  15765822 cgacgtgtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatagg 15765878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 17831534 - 17831486
Alignment:
Q  239 gtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaat 286  Q
    ||||| |||||| |||| |||||||||||||||| ||||||||||||||    
T  17831534 gtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaat 17831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 26830614 - 26830701
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||| |||||||||||| ||||| |||||  |||| ||| |||| ||| || ||||||||||||||   |||||||| |||||||    
T  26830614 acataattaaatgtaattataagtgtc-gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 15680835 - 15680930
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 312  Q
    |||||||| | |||||||||| |||||||||||| |||||||| ||||||||||| | |||||| ||||||| |||||||| ||||||| ||||||    
T  15680835 acataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagga 15680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 20549778 - 20549905
Alignment:
Q  184 acactgatacaccaacaccgctaataatttgaaaca------taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggac 277  Q
    ||||||| ||||| |||||||||||||||||| | |      ||||||| ||||||||||||||||||||||| |||| |||  ||||||||| || |||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagac 20549877  T
Q  278 acgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||| | |||||||  |||||||    
T  20549878 acgcctaatccgaggagtgcccgtgctt 20549905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 32287496 - 32287408
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| || || ||||||||||||||||| ||| |||| ||||||||||| ||||||| |||||| | |||||||| |||||||    
T  32287496 acataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt 32287408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 310
Target Start/End: Original strand, 598188 - 598327
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataattt--gaaa----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||| ||||||||| ||| | ||||||||||||||||  ||||    | ||||| ||||||||| || |||||||||||  |||||||| ||||||||||    
T  598188 gacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgaca 598287  T
Q  271 ctgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    | |||||||||||||| | || ||||| ||||||| ||||    
T  598288 ccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 7438766 - 7438837
Alignment:
Q  240 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| |||||||||  ||| ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatagg 7438837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 5835272 - 5835366
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||| ||||||||||||||||||||||  ||| |||||||||| || || ||||||||| |||| | || ||||||  ||||||||||    
T  5835272 aacataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgcttaatccgagaagtgtttttgctttatag 5835366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 21880178 - 21880271
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||||||||||| ||||||||  ||||||||||  ||||||||||||| | || ||||| ||||||| ||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 310
Target Start/End: Original strand, 24105658 - 24105797
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||| ||||||||| || || |||| |||||||||||||||      ||| ||||| |||||||| | ||||||| ||||  ||| ||||||||||||||    
T  24105658 gacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgaca 24105757  T
Q  271 ctgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    | |||||||||||||  | ||||||||| |||||| ||||    
T  24105758 ccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 21864836 - 21864927
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| | |||||||| | |||||| ||||| |||||||| ||||||||||| |||||||| ||||||| ||||||||  |||||| ||||    
T  21864836 ataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 25481883 - 25482021
Alignment:
Q  178 acatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacac 271  Q
    ||||||||| ||| || || |||| |||||||||||||||      ||||||||| |||||||| | |||| ||||||| |||||| ||||||||||||     
T  25481883 acatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgacat 25481982  T
Q  272 tgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||  |||||| |||||||| |||| | ||||||| ||||    
T  25481983 tgaaacacgcttaattcaaagagtatccgtgcttcatag 25482021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 5409836 - 5409770
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||| |||||||| ||||||||||| |||||||||||||| | |||||||| ||||||| |||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 5409770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 9778559 - 9778625
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||| |||| ||| ||||||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatagg 9778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 33994238 - 33994332
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| || ||||| | |||||||||||  ||||||||  ||||| |||| | |||||||||||| ||||||||||||||| || |||||    
T  33994238 acataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatagg 33994332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 27093446 - 27093377
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||| | |||||||||||| ||||||||   ||||||||||||||||||||| |||||| ||||||    
T  27093446 acataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaat 27093377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 27184855 - 27184924
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||| | |||||||||||| ||||||||   ||||||||||||||||||||| |||||| ||||||    
T  27184855 acataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaat 27184924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 24339701 - 24339772
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||| || |||||||| |||||||||||||| | |||||||  ||||||| ||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 42720948 - 42720830
Alignment:
Q  198 acaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaag 291  Q
    ||||||||||||||||||||      ||||||| |||||||||||||||||| |||||  |||| |||||||| | |||| || ||||| ||||||| |     
T  42720948 acaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacacaacatgtgtacaacaccggaacacgtctaattcgat 42720849  T
Q  292 gagtgttcgtgctttatag 310  Q
     |||||| |||||| ||||    
T  42720848 aagtgtttgtgcttcatag 42720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 32094020 - 32093954
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactggg-acacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| |||||||| ||||||||||| ||| ||||||||||| | |||||||||||||||| ||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 18213066 - 18212973
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | ||||||||||||||||||||||| |||||||   | || ||||| ||||||||||| || | ||||||||  |||||| ||||    
T  18213066 acataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 26022579 - 26022539
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacat 260  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  26022579 taattcagtgtaactatatgtgtcggtgtcgaacacgacat 26022539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 27732272 - 27732189
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| |||||||||||||||||||     ||||||||| ||||||||||  |||||| |||||||| |  ||||| |||||||    
T  27732272 acataattcagtgtaattatatgtgtcggt-----acacgacatatgtccgacaccaggacacacctaattcgaaaagtgtccgtgctt 27732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 1433491 - 1433578
Alignment:
Q  228 tgtaattatatgtgtcggtgtcga-----acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||||||||||||||      ||| ||||||||||||||||  ||||||| ||||| | |||||||| ||||||| ||||    
T  1433491 tgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 310
Target Start/End: Original strand, 5307297 - 5307375
Alignment:
Q  232 attatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||  ||| || |  ||| ||||||| ||||||||||||| |||||||||| ||||||| ||||    
T  5307297 attatatgtgtcagtgtcatacaagatagatgtgcgacactaggacacgcctaatccaaggagtgtacgtgcttcatag 5307375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 8234171 - 8234241
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    ||||||||||| |||| ||| | ||| |||||||| ||||||||  |||||||||| | ||||||||||||    
T  8234171 aacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaat 8234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 39138470 - 39138536
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcct 283  Q
    |||||||||| ||||||||||| ||||||||||| |||||| |  ||||  |||| |||||||||||    
T  39138470 acataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgcct 39138536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 43027462 - 43027404
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| ||||||||||| |||||||||||||| | | |||||| ||||||| ||||    
T  43027462 acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 22602743 - 22602710
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  22602743 acataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 26733330 - 26733399
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||| | |||||| |||||||||||||| |||||||   ||||||| || || |||||||||||    
T  26733330 acataattcagtctaattaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaat 26733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 640139 - 640171
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtc 249  Q
    |||||||||| ||||||||||||||||||||||    
T  640139 acataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 247
Target Start/End: Complemental strand, 3520373 - 3520345
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtg 247  Q
    |||||||||||||||||||||||||||||    
T  3520373 ataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 3554539 - 3554459
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||  | ||  |||||| |||||| ||||||| | ||||||    
T  3554539 acataatttaatgtaattatagatgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgt 3554459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 7197327 - 7197271
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggga 276  Q
    |||||||||||||||| | |||||||||||| |||| |||  |||||||||| ||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 8160475 - 8160547
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||||||||||||    ||||||||||| | || || |||||||| ||||| || |||||||||||||    
T  8160475 gtgtcggtgtcgaacacgtatcgtgtccgacaccgagatacacctaattctaggagcgtccgtgctttatagg 8160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 24146842 - 24146874
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtc 249  Q
    |||||||||||| ||||||||||||||||||||    
T  24146842 acataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 43250074 - 43250118
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||    
T  43250074 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 12895296 - 12895214
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||||||| ||||||||||| |||||||  |||||||||||||| | |||||||||||||||| ||||    
T  12895296 tgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 23293019 - 23292926
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| | |||||| | |||||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  23293019 acataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 49431052 - 49431145
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||||||||||| |||||||| |||||| |||| ||||||||||| || | |||||||| | ||||||||||    
T  49431052 acataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 8423751 - 8423682
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||  |||||||||| ||||||||||||||    
T  8423751 acataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaat 8423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 28964281 - 28964188
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | ||||| |||||| ||||||||  | ||||||||||||||||||||||| | |||||||| | ||||| ||||    
T  28964281 acataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 19482727 - 19482799
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||| | | |||||||| ||||||||||||||||||| |||||| | |||||||||||||||| |||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatagg 19482799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 310
Target Start/End: Original strand, 29205529 - 29205587
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||  ||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  29205529 acacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 30982878 - 30982812
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||  |||||||| ||||||||||| |||||||||||||| ||| |||||| |||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgctt 30982812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 34306826 - 34306744
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | |||||||||||| |||||||| ||||||||||| | ||||||||||||   |||| ||||||||||| ||||    
T  34306826 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 16073421 - 16073514
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||| |||||||| | |||||||||||| |||||| |  |||||||||||  |||||||||||| | |||||||| | ||||| |||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatagg 16073514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 715640 - 715545
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtc--gaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||| ||||||  | ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  715640 acataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 752966 - 752871
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtc--gaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||| ||||||  | ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  752966 acataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 19097924 - 19097861
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcct 283  Q
    ||||||| | ||||||||| ||||||||||||||| |||| ||||| ||||| |||||||||||    
T  19097924 taattcagtataattatatttgtcggtgtcgaacatgacacgtgtctgacacggggacacgcct 19097861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 40224531 - 40224453
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 295  Q
    |||||||| |||||||| |||||||||||||| | ||| || |||| ||||||| ||||||||| ||||| | ||||||    
T  40224531 acataatttaatgtaatcatatgtgtcggtgttggacatgatatgtttccgacattgggacacgtctaatccgaggagt 40224453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 54580056 - 54580006
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 267  Q
    |||||||||| |||||||||| |||||||||||| |||||||| |||||||    
T  54580056 acataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccg 54580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 16184902 - 16184951
Alignment:
Q  262 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||||||||||||||||||| | ||||||||| |||||| |||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatagg 16184951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 23861464 - 23861368
Alignment:
Q  217 acataattcaatgtaattatat--gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||| |||||||||||||||||  |||||||||||  | ||||||  |||| | |||   |||||||||||||||| |||||||||||||| |||||    
T  23861464 acatgattcaatgtaattatatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcatagg 23861368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 28084589 - 28084638
Alignment:
Q  256 gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||| |||||||||||||||||||||||||| | |||||||| |||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgctt 28084638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 40179669 - 40179600
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||| |||||||||||| |||||||||| ||||||||  ||| ||||||   ||||||||||||    
T  40179669 acataattcagtgtaattatatgcgtcggtgtcggacacgacacatgttcgacaccatgacacgcctaat 40179600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 4157462 - 4157542
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||| | || ||||| | |||||||||||| ||||||||  |||||||||| | || ||||||||||| ||||||||    
T  4157462 acataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgt 4157542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 12797371 - 12797283
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||| |||||||| | |||||||||||| |||||| |  |||| ||||| |||||| | ||||| | |||| |||||||||||    
T  12797371 acataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgctt 12797283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 21945529 - 21945609
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||||| |||||||| | |||||||||||| ||| ||||  |||||||||| |  ||||||||||| | ||||||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgt 21945609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 4672118 - 4672024
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| ||||  ||||||||||||||||| | || | | |||| ||||||||| ||| | ||||| ||||||||||  |||||| |||||    
T  4672118 acataattcagtgtagctatatgtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcatagg 4672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 35161062 - 35161156
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| |||||||||| || || | |||| |||||||| ||||||||||| || |||| |||||| | |  ||||| ||||||| |||||    
T  35161062 acataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatagg 35161156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 903984 - 904021
Alignment:
Q  242 tcggtgtcgaacacgacatgtgtccgacactgggacac 279  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  903984 tcggtgttggacacgacatgtgtccgacactgggacac 904021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 9996866 - 9996935
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||||| | ||||||||||| ||||||||  |||  ||| |||||||||||||| |||| ||||||    
T  9996866 acataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactggaacacacctaat 9996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 35158018 - 35157925
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | |||||||||| |||||||||||  ||||||||  ||||| |||| || |||||| |||| | || ||||| ||||||| ||||    
T  35158018 acataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 35723417 - 35723384
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||||||||||||||||||||| ||||||    
T  35723417 acataattcaatgtaattatatgtgtcagtgtcg 35723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 40006029 - 40006098
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    ||||||||  |||||||||||| ||||| | ||||||||||||  ||||||| || | ||||||||||||    
T  40006029 acataattttatgtaattatatatgtcgatatcgaacacgacacatgtccgataccgagacacgcctaat 40006098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 46715507 - 46715418
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||||||||| |||||| |||| |||||| |||| | |  ||||||||||| || ||| | ||||| | ||||||||||||||||    
T  46715507 acataattcaatgtagttatatttgtctgtgtcggacactgccgcgtgtccgacaccggcacatgtctaatccgaggagtgttcgtgctt 46715418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 3947766 - 3947706
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||| |||||||| |||||||||||  |||||| |||||| | |||||||| |||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgctt 3947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 4157175 - 4157255
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||| | || ||||| | |||||||||||| ||||||||  |||||||||| | || || |||||||| ||||||||    
T  4157175 acataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgt 4157255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 20633555 - 20633591
Alignment:
Q  275 gacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| |||||||||||||||||| |||||    
T  20633555 gacacgcctaatccaaggagtgttcgtgcttcatagg 20633591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 22234890 - 22234818
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||  |||||||| |||||||||||  ||||||  ||||| | || ||||||||||||| |||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatagg 22234818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 22440606 - 22440562
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||| ||||||||||||| | |||||||| |||||||    
T  22440606 gtgtccgacactaggacacgcctaatccgaggagtgtccgtgctt 22440562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 36409545 - 36409505
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacga 257  Q
    |||||||| | |||||||||| |||||||||||||||||||    
T  36409545 acataatttagtgtaattataggtgtcggtgtcgaacacga 36409505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 36423711 - 36423671
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacga 257  Q
    |||||||| | |||||||||| |||||||||||||||||||    
T  36423711 acataatttagtgtaattataggtgtcggtgtcgaacacga 36423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 70303 - 70392
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||  ||||| ||||||| | | ||||||||||||||    
T  70303 aacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgctt 70392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 14134725 - 14134810
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtg 302  Q
    |||||||||| ||||||||||| |||||||||| ||||||||| ||||||| |||  ||||||||||||||| |||||||| ||||    
T  14134725 acataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtg 14134810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 43737833 - 43737756
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||| |||| |||||| || |||||||||| |||||||    
T  43737833 tgtaattatatgtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgctt 43737756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 22652035 - 22652106
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||| | |||||||| ||||||| ||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 5813640 - 5813706
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||  |||||||| |||||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgctt 5813706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 18407745 - 18407839
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| |||||||| | |||||| || || ||||||||  ||||||||||| ||||||||||||||  |||||||| ||||||| |||||    
T  18407745 acataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatagg 18407839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 126382 - 126295
Alignment:
Q  215 aaacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtg 302  Q
    ||||| |||| |||||||||||||||||| |||||| |||||||| |||||| | || |||||||| ||||| | |||||||| ||||    
T  126382 aaacacaattaaatgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 33405417 - 33405330
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgct 304  Q
    |||||||| | ||||||||||||||||||||||| ||||||||  |||| |||||  ||||||| ||||| ||| |||||| ||||||    
T  33405417 acataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgct 33405330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 34451032 - 34450961
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| ||||||| ||||    
T  34451032 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 3951558 - 3951476
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||| || ||||||||||| |||||||| | ||||||| ||||    
T  3951558 tgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 4786371 - 4786278
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||| ||| |  | |||| | || |||||| |||||| ||||||| ||||    
T  4786371 acataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgttcgataacgagacatggcttattcaaagagtgtccgtgcttcatag 4786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 29447109 - 29447044
Alignment:
Q  240 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    ||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||| |||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgctt 29447044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 29510304 - 29510232
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| |||||||  ||||||||||| ||||||| |||||| | |||||||| ||||||| |||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 29510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 22204713 - 22204764
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 312  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||||||    
T  22204713 gtgtccgacactgagacacgtctaatccaaggagtgttcatgctttatagga 22204764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 36450836 - 36450694
Alignment:
Q  174 acggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 267  Q
    ||||||| ||||||||| || || ||||  ||||||||||||||      || |||||| |||||||| | |||| ||||||| |||||||  |||||||    
T  36450836 acggacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccg 36450737  T
Q  268 acactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||  ||||||||||||| | ||||||||  |||||| ||||    
T  36450736 acaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 926815 - 926733
Alignment:
Q  223 ttcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||| |||||||||| |||||||||||| || ||||| ||||||||||| |||||| || | || | |||||||| |||||||    
T  926815 ttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgctt 926733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 9097908 - 9097854
Alignment:
Q  196 caacaccgctaataatttgaaacataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||| | ||||||||||| |||||||||||| |||||||||||| ||||||||    
T  9097908 caacactggtaataatttgagacataattcaatataattatatgtgccggtgtcg 9097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 13397622 - 13397671
Alignment:
Q  262 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| | ||||||||||||||||||||||| ||||||| |||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatagg 13397671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 31556977 - 31557102
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa-----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacac 271  Q
    ||||||| |||||| || || |||| | |||||||||||||     ||||||||| |||||||| | || ||||||||  ||||||||  ||||||||||    
T  31556977 gacatggtcactgacacgccgacacagttaataatttgaaaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacac 31557076  T
Q  272 tgggacacgcctaattcaaggagtgt 297  Q
      ||||||||||||| ||||| ||||    
T  31557077 caggacacgcctaatccaaggtgtgt 31557102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 6065650 - 6065586
Alignment:
Q  246 tgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||| ||||||||  |||||||||| || |||||| ||||||||||||||| ||||||| ||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 31236610 - 31236570
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacga 257  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  31236610 acataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 18964203 - 18964234
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgt 248  Q
    ||||||||||||||||||||||||||||||||    
T  18964203 acataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 28745557 - 28745628
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||| ||||||||  |||||| ||| | |||| | |||||||||||||||| ||||||| ||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 29447503 - 29447574
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||||  |||||||||||||||||||| |||||| | |||||   |||||||| ||||||| ||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 310
Target Start/End: Original strand, 11944737 - 11944795
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||| |||||||| | |||||||||||| | | |||||||||||||| ||||    
T  11944737 acacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 12606860 - 12606830
Alignment:
Q  219 ataattcaatgtaattatatgtgtcggtgtc 249  Q
    |||||||||||||||||||||||||||||||    
T  12606860 ataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 20679428 - 20679362
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcct 283  Q
    ||||| |||| |||||||||| |||||||||||  || | ||| ||||||||||| |||||||||||    
T  20679428 acatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgcct 20679362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 30068023 - 30067965
Alignment:
Q  255 cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggac 313  Q
    |||| |||||||||||||||||||| |||||| | | |||||| ||||||| |||||||    
T  30068023 cgacgtgtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcataggac 30067965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 5138865 - 5138828
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaaca 254  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  5138865 acataattcaatgtaatcatatgtgccggtgtcgaaca 5138828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 8293854 - 8293931
Alignment:
Q  220 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    ||||||| |||||||||||||||||||||| |||| ||||  | || |||||  |||||| |||||| | ||||||||    
T  8293854 taattcagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 8847282 - 8847315
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  8847282 acataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 11927119 - 11927086
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  11927119 acataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 13403177 - 13403226
Alignment:
Q  262 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||| | ||||||| ||||||||||||||| ||||||| |||||    
T  13403177 tgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatagg 13403226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 22943347 - 22943302
Alignment:
Q  252 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 297  Q
    |||||||| ||||||||||| |||||||||||||| | ||||||||    
T  22943347 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 22943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 24858070 - 24858135
Alignment:
Q  245 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||| ||||||||||||||| || | ||||||||||||||   ||||||||| |||||| ||||    
T  24858070 gtgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcatag 24858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 26902208 - 26902175
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||| |||||||||||||||||||||||    
T  26902208 acataattcagtgtaattatatgtgtcggtgtcg 26902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 44462224 - 44462159
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||| |||| |||||||||||||||  |||||| |  |||||||||| |||||||| |||||    
T  44462224 aattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaat 44462159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 44469757 - 44469692
Alignment:
Q  221 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 286  Q
    |||||||| |||| |||||||||||||||  |||||| |  |||||||||| |||||||| |||||    
T  44469757 aattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaat 44469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 44067597 - 44067641
Alignment:
Q  261 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||    
T  44067597 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 44067641  T

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Target: scaffold0380 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 8634 - 8721
Alignment:
Q  224 tcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||||||   ||||| |||| |||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||| |||||    
T  8634 tcaatgtaattactcgtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatagg 8721  T

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Target: scaffold0652 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 305
Target Start/End: Complemental strand, 536 - 407
Alignment:
Q  182 ggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggg 275  Q
    |||||||||||| || |||| |||||||||||||||      || |||||| |||||||| | |||||||||||| |||||||  ||||||||||| |||    
T  536 ggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccggg 437  T
Q  276 acacgcctaattcaaggagtgttcgtgctt 305  Q
    |||| |||||| | |||||||| |||||||    
T  436 acacacctaatccgaggagtgtccgtgctt 407  T

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Target: scaffold0450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 8635 - 8564
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| ||| |||||| | |||||||||||||| ||||||||||||| |||||||| ||||||| ||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 45563 - 45470
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||||||||||| |||||||| ||||| ||||| | |||| ||||||| ||| || ||| ||||||| ||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcatag 45470  T

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Target: scaffold0793 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 4916 - 4821
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtc--gaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||| ||||||  | ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  4916 acataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 14556 - 14646
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||||| |||||||| | |||   |||||| |||||||| ||||||||||| | ||||||||||||  ||||||||| ||||||| ||||    
T  14556 acataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 8778 - 8893
Alignment:
Q  177 gacatggacactgatacaccaacaccgctaataatttgaaa----cata--attcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 270  Q
    |||| ||||||||| || || |||| |||||||||||||||    ||||  ||| | |||||||| | |||||||||||| |||||||| ||||||||||    
T  8778 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 8877  T
Q  271 ctgggacacgcctaat 286  Q
    | | ||||||||||||    
T  8878 ccgagacacgcctaat 8893  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 241653 - 241724
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||| ||||||| |||||||| ||||||||||| |||||||||||||| | || ||||| ||||||| ||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 5058 - 4976
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    |||||||| | |||||||||||| |||||||| |||||||||| || |||| ||||||| | ||||||||  |||||| ||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 13454 - 13520
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||| |||||||| | ||| |||||| |||||| |||||| |||||||||| |||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgctt 13520  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 21873 - 21807
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 305  Q
    |||||||||||| |||||||| | ||| |||||| |||||| |||||| |||||||||| |||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgctt 21807  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 5993 - 5932
Alignment:
Q  242 tcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||||||||||| ||||| ||||| | ||||||||| || |||||||||| |||||    
T  5993 tcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgc 5932  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 23573 - 23642
Alignment:
Q  242 tcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    ||||||||| |||||| |||||||||| |||||||||||| |||| | || |||||| |||||| |||||    
T  23573 tcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttgtgcttcatagg 23642  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 174586 - 174493
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||  ||||||| |  ||||||||| | ||||| |||||||||||||  || ||||||||||| |||||| ||||||| ||| ||||    
T  174586 acataattcagcgtaattacaaatgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaaggaatgttcgtacttcatag 174493  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 180099 - 180006
Alignment:
Q  217 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 310  Q
    ||||||||||  ||||||| |  ||||||||| | ||||| |||||||||||||  || ||||||||||| |||||| ||||||| ||| ||||    
T  180099 acataattcagcgtaattacaaatgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaaggaatgttcgtacttcatag 180006  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 3345 - 3429
Alignment:
Q  228 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 312  Q
    |||||||| | ||||| |||||| ||| |||| |||   |||||||||||||||||||| | |||||||| ||||||| ||||||    
T  3345 tgtaattacaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatagga 3429  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 6339 - 6371
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgtcg 250  Q
    |||||||||||||||||||||||||||||||||    
T  6339 cataattcaatgtaattatatgtgtcggtgtcg 6371  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 71784 - 71856
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 311  Q
    |||||||||||| |||| ||| ||||||||||| |||||||| ||||| | ||||||||  |||||| |||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatagg 71856  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 92773 - 92825
Alignment:
Q  163 atctatgaagcacggacatggacactgatacaccaacaccgctaataatttga 215  Q
    |||||||||||||||| | ||||||||| || || ||||||||||||||||||    
T  92773 atctatgaagcacggatacggacactgacacgccgacaccgctaataatttga 92825  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 1683 - 1733
Alignment:
Q  230 taattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacg 280  Q
    |||||||| |||||||||||| ||||||||  ||||||||||| |||||||    
T  1683 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 28877 - 28907
Alignment:
Q  218 cataattcaatgtaattatatgtgtcggtgt 248  Q
    |||||||||||||||||||||||||||||||    
T  28877 cataattcaatgtaattatatgtgtcggtgt 28907  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 99918 - 99952
Alignment:
Q  216 aacataattcaatgtaattatatgtgtcggtgtcg 250  Q
    ||||||||||||||||||||||||||| |||||||    
T  99918 aacataattcaatgtaattatatgtgttggtgtcg 99952  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 53239 - 53303
Alignment:
Q  239 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 303  Q
    |||||||||||| ||| |||| ||||||||||| ||||||||  |||| |||| ||||| |||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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