View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15009_low_11 (Length: 256)
Name: NF15009_low_11
Description: NF15009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15009_low_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 4495201 - 4495440
Alignment:
| Q |
17 |
caaaggggcatggagtatgtattcatgctattaaatgactcaatgttgaaagtaatgttacttacagaagtgtctaaacatttttctttaaaaacgtgac |
116 |
Q |
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| T |
4495201 |
caaaggggcatggagtatgtattaatgctattaaatgactcaatgttgaaagtaatgttacttacaaaagtgtctaaacatttttctttaaaaacgtgac |
4495300 |
T |
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| Q |
117 |
aatactgttcaaaatatattcactaataattattattatccaatttaattttgcagggttggaataagacttccaacagtagaagtgaggtttaagaatt |
216 |
Q |
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| T |
4495301 |
aatactgttcaaaatatattcactaataattattattatccaatttaattttgcagggttggaataagacttccaacagtagaagtgaggtttaagaatt |
4495400 |
T |
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| Q |
217 |
tgactgttgaagctgattcctttgttggcagcagagcttt |
256 |
Q |
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| T |
4495401 |
tgactgttgaagctgattcctttgttggcagcagagcttt |
4495440 |
T |
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