View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15009_low_13 (Length: 250)

Name: NF15009_low_13
Description: NF15009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15009_low_13
NF15009_low_13
[»] chr2 (37 HSPs)
chr2 (3-212)||(38838995-38839205)
chr2 (10-72)||(11931754-11931816)
chr2 (10-62)||(7799920-7799972)
chr2 (10-72)||(5405059-5405121)
chr2 (10-72)||(6223129-6223191)
chr2 (10-72)||(7608112-7608174)
chr2 (10-72)||(8042159-8042221)
chr2 (10-72)||(9172283-9172345)
chr2 (10-72)||(19141203-19141265)
chr2 (10-72)||(22839064-22839126)
chr2 (10-72)||(24252023-24252084)
chr2 (10-72)||(38292015-38292077)
chr2 (22-72)||(43444689-43444739)
chr2 (18-63)||(4835727-4835772)
chr2 (19-66)||(42133821-42133868)
chr2 (10-72)||(11841730-11841792)
chr2 (22-72)||(19262743-19262793)
chr2 (10-72)||(44365220-44365282)
chr2 (10-72)||(44644933-44644995)
chr2 (10-63)||(31610790-31610843)
chr2 (10-66)||(13125282-13125338)
chr2 (16-72)||(16865117-16865173)
chr2 (29-72)||(9006940-9006983)
chr2 (10-72)||(39358209-39358271)
chr2 (17-70)||(1381280-1381333)
chr2 (16-72)||(13117467-13117523)
chr2 (10-62)||(19165920-19165972)
chr2 (10-66)||(36072243-36072299)
chr2 (16-63)||(24093679-24093725)
chr2 (10-65)||(24607838-24607889)
chr2 (19-72)||(2183103-2183156)
chr2 (16-61)||(3013839-3013884)
chr2 (16-73)||(14802916-14802973)
chr2 (10-63)||(20387377-20387430)
chr2 (19-51)||(34248559-34248591)
chr2 (19-63)||(36177723-36177767)
chr2 (22-66)||(40618878-40618921)
[»] chr7 (50 HSPs)
chr7 (10-72)||(27045545-27045607)
chr7 (10-66)||(4131640-4131696)
chr7 (16-72)||(38767202-38767258)
chr7 (10-62)||(41898061-41898113)
chr7 (10-72)||(3785583-3785645)
chr7 (10-72)||(6766687-6766749)
chr7 (10-72)||(20885166-20885228)
chr7 (10-72)||(28061652-28061714)
chr7 (10-72)||(36623371-36623433)
chr7 (10-72)||(39130063-39130125)
chr7 (10-72)||(40090055-40090117)
chr7 (10-72)||(42890480-42890542)
chr7 (10-72)||(46103507-46103569)
chr7 (10-72)||(47156090-47156152)
chr7 (10-72)||(48602499-48602561)
chr7 (19-72)||(7169189-7169242)
chr7 (22-66)||(37467456-37467500)
chr7 (13-72)||(7457862-7457921)
chr7 (19-66)||(44594666-44594712)
chr7 (16-63)||(47525979-47526026)
chr7 (10-72)||(5529074-5529136)
chr7 (10-72)||(7438966-7439028)
chr7 (10-72)||(16778568-16778630)
chr7 (16-66)||(36515908-36515958)
chr7 (10-72)||(38851984-38852046)
chr7 (10-72)||(40256120-40256182)
chr7 (10-66)||(4048871-4048927)
chr7 (10-62)||(44732085-44732137)
chr7 (10-62)||(46479902-46479954)
chr7 (10-66)||(49101950-49102006)
chr7 (10-72)||(32431495-32431557)
chr7 (17-63)||(35570193-35570239)
chr7 (10-63)||(21379816-21379869)
chr7 (19-71)||(6174900-6174952)
chr7 (10-72)||(8683881-8683940)
chr7 (10-62)||(11502717-11502769)
chr7 (10-62)||(36585182-36585234)
chr7 (10-58)||(41134625-41134673)
chr7 (19-62)||(25923482-25923525)
chr7 (19-62)||(26161669-26161712)
chr7 (10-61)||(35117199-35117250)
chr7 (19-66)||(39278477-39278524)
chr7 (33-72)||(49110630-49110669)
chr7 (10-72)||(3851137-3851199)
chr7 (10-72)||(30342137-30342199)
chr7 (16-62)||(36341693-36341739)
chr7 (18-72)||(41088650-41088704)
chr7 (10-72)||(42877449-42877511)
chr7 (10-62)||(2198675-2198727)
chr7 (10-62)||(5788514-5788566)
[»] chr4 (56 HSPs)
chr4 (15-72)||(7614678-7614735)
chr4 (17-72)||(56297846-56297901)
chr4 (22-72)||(2571031-2571081)
chr4 (10-72)||(20875384-20875446)
chr4 (10-72)||(26125771-26125833)
chr4 (10-72)||(29830406-29830468)
chr4 (10-72)||(38416787-38416849)
chr4 (16-66)||(38721406-38721456)
chr4 (10-72)||(43967786-43967848)
chr4 (10-72)||(44232214-44232276)
chr4 (10-72)||(47386423-47386485)
chr4 (10-72)||(54330827-54330889)
chr4 (10-72)||(55209711-55209773)
chr4 (19-72)||(2760873-2760926)
chr4 (15-72)||(35381036-35381093)
chr4 (19-59)||(34316596-34316636)
chr4 (16-72)||(36523111-36523167)
chr4 (10-62)||(45291905-45291957)
chr4 (10-66)||(55091324-55091380)
chr4 (9-72)||(56080045-56080109)
chr4 (10-72)||(4467656-4467718)
chr4 (10-72)||(12240315-12240377)
chr4 (10-72)||(12625314-12625376)
chr4 (10-64)||(14144594-14144648)
chr4 (10-72)||(17610343-17610405)
chr4 (10-72)||(19903787-19903849)
chr4 (10-72)||(25296717-25296779)
chr4 (10-72)||(26170049-26170111)
chr4 (21-63)||(52227097-52227139)
chr4 (10-63)||(27344085-27344138)
chr4 (19-63)||(10550498-10550542)
chr4 (16-72)||(38716949-38717005)
chr4 (10-62)||(39307769-39307821)
chr4 (10-72)||(50205806-50205868)
chr4 (16-62)||(51355181-51355227)
chr4 (15-72)||(35686436-35686493)
chr4 (10-62)||(19433495-19433547)
chr4 (10-62)||(30446370-30446422)
chr4 (10-66)||(32871496-32871552)
chr4 (22-69)||(2068045-2068092)
chr4 (29-72)||(3037043-3037086)
chr4 (33-72)||(5119081-5119120)
chr4 (10-61)||(17446770-17446821)
chr4 (37-72)||(29051747-29051782)
chr4 (10-72)||(9029586-9029648)
chr4 (15-62)||(27407759-27407808)
chr4 (10-72)||(31010277-31010339)
chr4 (10-72)||(37767095-37767157)
chr4 (16-66)||(50181129-50181179)
chr4 (33-66)||(25633265-25633298)
chr4 (19-52)||(28494294-28494327)
chr4 (29-62)||(51456510-51456543)
chr4 (10-62)||(25918276-25918328)
chr4 (16-52)||(27755806-27755842)
chr4 (10-66)||(29585982-29586038)
chr4 (14-50)||(34652157-34652193)
[»] chr1 (39 HSPs)
chr1 (9-66)||(22575723-22575780)
chr1 (10-72)||(6402547-6402609)
chr1 (10-72)||(11641204-11641266)
chr1 (10-72)||(31444986-31445048)
chr1 (10-72)||(36757623-36757685)
chr1 (16-66)||(44647856-44647906)
chr1 (19-72)||(30385291-30385344)
chr1 (10-66)||(3485344-3485400)
chr1 (10-66)||(9342782-9342838)
chr1 (10-72)||(16120577-16120639)
chr1 (10-72)||(17306017-17306079)
chr1 (10-72)||(30003596-30003658)
chr1 (10-72)||(40771909-40771971)
chr1 (10-72)||(40977625-40977687)
chr1 (19-72)||(6766435-6766488)
chr1 (23-72)||(34634970-34635019)
chr1 (10-63)||(40800524-40800576)
chr1 (10-63)||(42735302-42735355)
chr1 (16-72)||(28030824-28030880)
chr1 (10-72)||(30701781-30701843)
chr1 (10-72)||(36399161-36399223)
chr1 (10-72)||(42788679-42788741)
chr1 (10-63)||(15382563-15382616)
chr1 (29-66)||(44644511-44644548)
chr1 (10-62)||(7568623-7568675)
chr1 (10-62)||(24321334-24321386)
chr1 (10-66)||(48375071-48375127)
chr1 (19-62)||(38153423-38153466)
chr1 (16-62)||(9881349-9881395)
chr1 (16-66)||(19711835-19711885)
chr1 (29-63)||(25695472-25695506)
chr1 (10-72)||(27292703-27292765)
chr1 (16-62)||(50972777-50972823)
chr1 (10-72)||(52024089-52024151)
chr1 (19-72)||(4302181-4302234)
chr1 (39-72)||(6406118-6406151)
chr1 (10-66)||(14777101-14777157)
chr1 (143-179)||(49662496-49662532)
chr1 (19-66)||(51021008-51021056)
[»] chr3 (41 HSPs)
chr3 (19-66)||(41252909-41252956)
chr3 (15-64)||(15332948-15332997)
chr3 (15-66)||(41751552-41751603)
chr3 (10-69)||(41943280-41943339)
chr3 (10-72)||(13499472-13499534)
chr3 (10-72)||(27334868-27334930)
chr3 (10-72)||(30213867-30213929)
chr3 (10-72)||(33415862-33415924)
chr3 (10-72)||(38137887-38137949)
chr3 (10-72)||(39866278-39866340)
chr3 (10-72)||(42490333-42490395)
chr3 (10-72)||(42761620-42761682)
chr3 (24-72)||(3017854-3017902)
chr3 (15-71)||(17643795-17643851)
chr3 (10-62)||(27010611-27010663)
chr3 (10-72)||(20765259-20765321)
chr3 (10-72)||(21797619-21797681)
chr3 (30-72)||(27813445-27813487)
chr3 (16-66)||(30057368-30057418)
chr3 (10-66)||(6910403-6910459)
chr3 (10-66)||(15568072-15568128)
chr3 (10-72)||(21005356-21005418)
chr3 (19-65)||(23940508-23940554)
chr3 (16-62)||(28389216-28389262)
chr3 (10-72)||(36227608-36227670)
chr3 (16-62)||(44856419-44856465)
chr3 (15-64)||(3020343-3020392)
chr3 (17-66)||(19327474-19327523)
chr3 (10-63)||(48334658-48334710)
chr3 (10-65)||(22786700-22786753)
chr3 (16-72)||(44561847-44561903)
chr3 (19-66)||(47164598-47164646)
chr3 (10-62)||(54507714-54507766)
chr3 (19-66)||(25527473-25527520)
chr3 (10-72)||(52167272-52167334)
chr3 (19-72)||(3430420-3430473)
chr3 (33-66)||(15664105-15664138)
chr3 (10-63)||(33803594-33803647)
chr3 (10-63)||(43181492-43181545)
chr3 (33-65)||(14412255-14412287)
chr3 (10-65)||(22782336-22782389)
[»] scaffold0225 (1 HSPs)
scaffold0225 (10-64)||(8970-9024)
[»] scaffold0029 (1 HSPs)
scaffold0029 (10-64)||(138167-138221)
[»] chr8 (35 HSPs)
chr8 (16-66)||(18090397-18090447)
chr8 (10-73)||(18035162-18035225)
chr8 (10-65)||(40716660-40716715)
chr8 (10-72)||(616846-616908)
chr8 (10-72)||(623239-623301)
chr8 (10-72)||(14237343-14237405)
chr8 (10-72)||(18044488-18044550)
chr8 (10-72)||(32998513-32998575)
chr8 (10-72)||(33700210-33700272)
chr8 (10-72)||(40494447-40494509)
chr8 (10-72)||(41263873-41263935)
chr8 (10-66)||(132086-132142)
chr8 (10-72)||(38957233-38957295)
chr8 (10-72)||(42587385-42587447)
chr8 (10-66)||(9632224-9632280)
chr8 (10-62)||(33905465-33905517)
chr8 (10-62)||(36641995-36642047)
chr8 (10-66)||(40204859-40204915)
chr8 (10-72)||(2766185-2766247)
chr8 (18-72)||(3100640-3100694)
chr8 (10-72)||(3370393-3370455)
chr8 (22-72)||(5878379-5878429)
chr8 (10-66)||(5173320-5173377)
chr8 (17-54)||(7430914-7430951)
chr8 (19-72)||(11162405-11162457)
chr8 (10-51)||(32855599-32855640)
chr8 (10-62)||(38497145-38497197)
chr8 (17-72)||(4270236-4270291)
chr8 (10-72)||(18020929-18020994)
chr8 (10-64)||(8394417-8394471)
chr8 (22-72)||(10982639-10982689)
chr8 (10-72)||(13216858-13216920)
chr8 (10-72)||(35403579-35403641)
chr8 (10-62)||(11637855-11637907)
chr8 (30-58)||(28724009-28724037)
[»] chr5 (37 HSPs)
chr5 (10-72)||(24992275-24992337)
chr5 (10-66)||(18998756-18998812)
chr5 (18-66)||(32017282-32017330)
chr5 (10-72)||(978140-978202)
chr5 (10-72)||(9502764-9502826)
chr5 (10-72)||(11761129-11761191)
chr5 (10-72)||(14634294-14634356)
chr5 (10-72)||(33387283-33387345)
chr5 (18-63)||(3422355-3422400)
chr5 (10-63)||(24916383-24916436)
chr5 (10-63)||(32400399-32400452)
chr5 (10-66)||(12456777-12456833)
chr5 (19-63)||(17476949-17476993)
chr5 (22-66)||(27579579-27579623)
chr5 (15-66)||(26387021-26387072)
chr5 (10-61)||(30355011-30355062)
chr5 (10-72)||(3472414-3472476)
chr5 (10-72)||(8086167-8086229)
chr5 (10-72)||(33587606-33587668)
chr5 (10-63)||(12359958-12360011)
chr5 (10-62)||(9050713-9050765)
chr5 (15-62)||(18094223-18094270)
chr5 (16-54)||(2825264-2825302)
chr5 (19-72)||(5947697-5947750)
chr5 (19-72)||(38916396-38916449)
chr5 (26-66)||(4671278-4671318)
chr5 (10-66)||(6996049-6996105)
chr5 (10-62)||(12007769-12007821)
chr5 (10-62)||(40156271-40156323)
chr5 (33-72)||(31197850-31197889)
chr5 (10-72)||(7224228-7224290)
chr5 (10-72)||(11251177-11251239)
chr5 (16-65)||(10822238-10822287)
chr5 (37-66)||(37495679-37495708)
chr5 (10-54)||(7749874-7749918)
chr5 (10-62)||(27109761-27109813)
chr5 (17-73)||(29492388-29492444)
[»] scaffold0009 (2 HSPs)
scaffold0009 (10-63)||(217012-217065)
scaffold0009 (10-66)||(53557-53613)
[»] scaffold0595 (1 HSPs)
scaffold0595 (22-72)||(4011-4061)
[»] scaffold0262 (1 HSPs)
scaffold0262 (10-64)||(22851-22905)
[»] chr6 (36 HSPs)
chr6 (10-72)||(6563289-6563351)
chr6 (10-72)||(18668825-18668887)
chr6 (10-64)||(23158046-23158100)
chr6 (10-72)||(24624078-24624140)
chr6 (10-72)||(32414816-32414878)
chr6 (10-63)||(5495321-5495374)
chr6 (10-71)||(8101664-8101725)
chr6 (15-72)||(15337551-15337608)
chr6 (19-72)||(31869771-31869824)
chr6 (10-62)||(19088095-19088147)
chr6 (19-62)||(3623856-3623899)
chr6 (10-72)||(2360053-2360115)
chr6 (10-72)||(4147994-4148056)
chr6 (10-72)||(10298710-10298772)
chr6 (10-72)||(17213921-17213983)
chr6 (10-72)||(22054835-22054897)
chr6 (10-72)||(28477816-28477878)
chr6 (10-62)||(15383067-15383119)
chr6 (10-66)||(24955533-24955589)
chr6 (10-62)||(29790279-29790331)
chr6 (17-72)||(1260493-1260548)
chr6 (10-72)||(1040887-1040949)
chr6 (5-63)||(7048994-7049052)
chr6 (16-58)||(17155226-17155268)
chr6 (10-72)||(17257788-17257850)
chr6 (10-72)||(20226435-20226497)
chr6 (10-72)||(22120419-22120481)
chr6 (10-72)||(32671879-32671941)
chr6 (16-72)||(4440913-4440969)
chr6 (37-72)||(19240756-19240791)
chr6 (18-72)||(29693946-29694000)
chr6 (10-63)||(20437150-20437203)
chr6 (10-63)||(24321202-24321255)
chr6 (10-62)||(12226048-12226100)
chr6 (29-65)||(14214069-14214105)
chr6 (25-61)||(21913653-21913689)
[»] scaffold0099 (1 HSPs)
scaffold0099 (19-72)||(28798-28851)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-73)||(161974-162037)
[»] scaffold0056 (1 HSPs)
scaffold0056 (10-62)||(71033-71085)
[»] scaffold0295 (1 HSPs)
scaffold0295 (10-72)||(13854-13916)
[»] scaffold0022 (1 HSPs)
scaffold0022 (10-72)||(100784-100846)
[»] scaffold0018 (1 HSPs)
scaffold0018 (10-72)||(67906-67968)
[»] scaffold0608 (1 HSPs)
scaffold0608 (16-66)||(1589-1639)


Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 38839205 - 38838995
Alignment:
Q  3 tcgagtgaaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaatatctcnnnnnnnntaatctcaaagttaga 102  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||    
T  38839205 tcgagagaaatcatacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaatatctcaaaaaaaa-aatctcaaagttaga 38839107  T
Q  103 aaattttccttagtaatatgattttattttagaatttatatttaaaaacacataaactgaattaaactaaaacaaatatttcattata--tatacacaca 200  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  38839106 aatttttccttagtaatatgattttattttaaaatttatatttaaaaacacataaactgaattaaactaaaacaaatatttcattatatatatacacaca 38839007  T
Q  201 cagtgaaatacc 212  Q
    ||||||||||||    
T  38839006 cagtgaaatacc 38838995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 11931816 - 11931754
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  11931816 aaatcaaacaacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaa 11931754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 7799972 - 7799920
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7799972 aaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaa 7799920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 5405121 - 5405059
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  5405121 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 5405059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 6223191 - 6223129
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  6223191 aaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaa 6223129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 7608174 - 7608112
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  7608174 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 7608112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 8042159 - 8042221
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  8042159 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 8042221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 9172283 - 9172345
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||| |||||    
T  9172283 aaatcaaacaacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaa 9172345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 19141203 - 19141265
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  19141203 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 19141265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 22839064 - 22839126
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||    
T  22839064 aaatcaaacaacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaa 22839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 24252084 - 24252023
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  24252084 aaatcaaacaacat-ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaa 24252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38292077 - 38292015
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||    
T  38292077 aaatcaaacaacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaa 38292015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 43444689 - 43444739
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  43444689 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaa 43444739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 4835772 - 4835727
Alignment:
Q  18 caacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  4835772 caacatcttatatgttaacatttgtatttatatattagttaaaaaa 4835727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 42133868 - 42133821
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42133868 aacatctttcatgctaacatttgtatttatatattagttaaaaaatat 42133821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 11841730 - 11841792
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  11841730 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 11841792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 19262793 - 19262743
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  19262793 atcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaa 19262743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 44365282 - 44365220
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  44365282 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 44365220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 44644995 - 44644933
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||||||| ||| |||| ||||||||||||||||||||| ||| |||||    
T  44644995 aaattaaacaacatcttatatgttaatatttatatttatatattagttaaaaagtatggtcaa 44644933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 31610790 - 31610843
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  31610790 aaatcaaacaacgtcttacattctaacatttgtatttatatattagttaaaaaa 31610843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 13125282 - 13125338
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||| |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  13125282 aaatcaaacaatatcttagatgctaatatttgtatttatacattagttaaaaaatat 13125338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 16865173 - 16865117
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||| ||| |||||    
T  16865173 aacaacaacttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaa 16865117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 9006940 - 9006983
Alignment:
Q  29 atgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  9006940 atgctaacatttgtatttataaattagttaaaaaatatggtcaa 9006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 39358271 - 39358209
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||| ||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  39358271 aaatcaaagaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 39358209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 1381280 - 1381333
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtc 70  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||    
T  1381280 acaacatcttatatgctaacttttgtttttatatattaataaaaaaaaattgtc 1381333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 13117467 - 13117523
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||| || |||| |||| ||||||||||| ||||||||||||| |||||    
T  13117467 aacaacatcttagatactaatatttatatttatatatcagttaaaaaatatggtcaa 13117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 19165920 - 19165972
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||| ||||| |||||||||||||||| |||||||    
T  19165920 aaattaaacaacatcttacatgataacaattgtatttatatattaattaaaaa 19165972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 36072299 - 36072243
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||| ||||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  36072299 aaatcaaataacatcttacatgctaatatttatatttatacattagttaaaaaatat 36072243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 24093679 - 24093725
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  24093679 aacaacatcttacatgctaacatttgta-ttatatgttagttaaaaaa 24093725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 24607889 - 24607838
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaata 65  Q
    |||| |||||||||||||    ||||||||| ||||||||||||||||||||||||    
T  24607889 aaatcaaacaacatctta----ctaacatttatatttatatattagttaaaaaata 24607838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 2183103 - 2183156
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| ||||||| ||||||||| ||| |||||||||||| ||| |||||    
T  2183103 aacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaa 2183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 3013839 - 3013884
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaa 61  Q
    ||||||| |||  |||||| ||||||||||||||||||||||||||    
T  3013839 aacaacaacttgcatgctagcatttgtatttatatattagttaaaa 3013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14802916 - 14802973
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaat 73  Q
    |||||||||||||||||||   ||||| |||||||||||||  |||||||| ||||||    
T  14802916 aacaacatcttatatgctatattttgtctttatatattagtagaaaaatatggtcaat 14802973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 20387377 - 20387430
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| |||||||||||| ||  || |||||||||||||||    
T  20387377 aaatcaaacaacatcttacatgctaacatttatacataaatattagttaaaaaa 20387430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 34248591 - 34248559
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatata 51  Q
    ||||||||| |||||||||||||||||||||||    
T  34248591 aacatcttacatgctaacatttgtatttatata 34248559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 36177723 - 36177767
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    ||||||||| ||| ||| |||| ||||||||||||||||||||||    
T  36177723 aacatcttagatgttaatatttttatttatatattagttaaaaaa 36177767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 40618921 - 40618878
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||| | |||||||||||||||||||||| |||||||||||    
T  40618921 atcttataggttaacatttgtatttatatatta-ttaaaaaatat 40618878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 27045545 - 27045607
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27045545 aaattaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 27045607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 4131640 - 4131696
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  4131640 aaatcaaacaacatcttacatgctaacttttgtatttatatattagttaaaaaatat 4131696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 38767202 - 38767258
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  38767202 aacaacatcttatatactgacatttgtatttatatattagttaaaaaatatggtcaa 38767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 41898113 - 41898061
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  41898113 aaatgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 41898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 3785645 - 3785583
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||    
T  3785645 aaatcaaacaacatcctgtatactaacatttgtatttatatattagttaaaaaatatggtcaa 3785583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 6766687 - 6766749
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||    
T  6766687 aaatcaaacaacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaa 6766749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 20885228 - 20885166
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  20885228 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 20885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 28061652 - 28061714
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  28061652 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 28061714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 36623433 - 36623371
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  36623433 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 36623371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 39130063 - 39130125
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  39130063 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 39130125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 40090055 - 40090117
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  40090055 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 40090117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 42890480 - 42890542
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  42890480 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 42890542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 46103507 - 46103569
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  46103507 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 46103569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 47156152 - 47156090
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  47156152 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 47156090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 48602561 - 48602499
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  48602561 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 48602499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 7169242 - 7169189
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  7169242 aacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaa 7169189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37467456 - 37467500
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  37467456 atcttaaatgctaacatttgtatttatatattagttaaaaaatat 37467500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 7457862 - 7457921
Alignment:
Q  13 tgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  7457862 tgaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 7457921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 44594666 - 44594712
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44594666 aacatcttatatgctaacatt-gtatttatatattagttaaaaaatat 44594712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 47525979 - 47526026
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  47525979 aacaagatcttaaatgctaacatttgtatttatatattagttaaaaaa 47526026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 5529136 - 5529074
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||| ||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||    
T  5529136 aaatcaaataacatcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaa 5529074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 7439028 - 7438966
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  7439028 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 7438966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 16778630 - 16778568
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  16778630 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaa 16778568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 36515958 - 36515908
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  36515958 aacaacatcttatatactaacatttgtatttatatattgattaaaaaatat 36515908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 38851984 - 38852046
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  38851984 aaatcaaacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 38852046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 40256182 - 40256120
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  40256182 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 40256120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 4048871 - 4048927
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||||| |||| | |||| |||||||||||||||||||||||||||||||    
T  4048871 aaatcaaacaacaacttacaagctagcatttgtatttatatattagttaaaaaatat 4048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 44732137 - 44732085
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  44732137 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaa 44732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 46479954 - 46479902
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  46479954 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaa 46479902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 49101950 - 49102006
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| |||| || |||||||||||| |||||||||||||||||    
T  49101950 aaatcaaacaacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatat 49102006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 32431495 - 32431557
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| || |||| ||||||||||||| |||||||||||| ||| |||||    
T  32431495 aaatcaaacaacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaa 32431557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 35570193 - 35570239
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  35570193 acaacatcttacatgctaaaatttgtatttgtatattagttaaaaaa 35570239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 21379869 - 21379816
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||| |||||||    
T  21379869 aaatcaaacaacatcttacatgctaatatttgtatttatacattagctaaaaaa 21379816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6174952 - 6174900
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtca 71  Q
    ||||||||| |||||||  |||||||||||| |||||||||||||||| ||||    
T  6174952 aacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtca 6174900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 8683940 - 8683881
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||| ||| |||||    
T  8683940 aaatcaaacaacatctt---tgctaatatttgtatttatatattagttaaaaagtatggtcaa 8683881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 11502717 - 11502769
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| |||| |||||||| ||||||| ||||||||||||| ||||||||||||    
T  11502717 aaatcaaacgacatcttacatgctaatatttgtatttatacattagttaaaaa 11502769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 36585234 - 36585182
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  36585234 aaatcaaacaacatcttacatgctaatatttgtatttatacattagtttaaaa 36585182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 41134625 - 41134673
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagtta 58  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||    
T  41134625 aaatcaaacaacatcttacatgctaatatttgtatttatacattagtta 41134673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 25923525 - 25923482
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||||||||||||||||||||||  ||||||||||| |||||||    
T  25923525 aacatcttatatgctaacatttgactttatatattaattaaaaa 25923482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 26161712 - 26161669
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||    
T  26161712 aacattttacatgctaatatttgtatttatatattagttaaaaa 26161669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 35117250 - 35117199
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaa 61  Q
    |||| ||||||||||||| ||||||| |||| |||||||| |||||||||||    
T  35117250 aaatcaaacaacatcttacatgctaatatttatatttatacattagttaaaa 35117199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 39278477 - 39278524
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||| ||| || ||||||||| |||||||||||||||||||||||||    
T  39278477 aacattttacatactaacatttatatttatatattagttaaaaaatat 39278524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 49110630 - 49110669
Alignment:
Q  33 taacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  49110630 taacatttgtattaatatattagttaaaaaatatggtcaa 49110669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 3851199 - 3851137
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| ||||||  || ||| ||||||||||||| |||||||||||| |||||||||    
T  3851199 aaatcaaacaatatcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaa 3851137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 30342199 - 30342137
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||| |||||||| || |||| ||||||||||||| |||||||||||| ||| |||||    
T  30342199 aaatcaaacgacatcttacatactaatatttgtatttatacattagttaaaaagtatagtcaa 30342137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 36341739 - 36341693
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||||||||||| || ||||||||| ||||||||| |||||||||||    
T  36341739 aacaacatcttacattctaacatttatatttatatgttagttaaaaa 36341693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 41088704 - 41088650
Alignment:
Q  18 caacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||| ||| ||| ||||| ||||||| |||||||||||||||| |||||    
T  41088704 caacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaa 41088650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 42877511 - 42877449
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| || |||| |||| |||||||| |||||||||||| ||| |||||    
T  42877511 aaatcaaacaacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaa 42877449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 2198727 - 2198675
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| |||||||||||||  || ||| ||||||||||||| ||||||||||||    
T  2198727 aaatcaaacaacatcttacttgttaatatttgtatttatacattagttaaaaa 2198675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 5788514 - 5788566
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| || |||| ||||||||||||| |||||| |||||    
T  5788514 aaatcaaacaacatcttacatactaatatttgtatttatacattagtaaaaaa 5788566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 7614735 - 7614678
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  7614735 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaa 7614678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 56297846 - 56297901
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  56297846 acaacattttatatgctaacatttgtatttatatattagttaataaatatggtcaa 56297901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 2571031 - 2571081
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  2571031 atcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaa 2571081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 20875384 - 20875446
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||    
T  20875384 aaatcaaacaacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaa 20875446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 26125833 - 26125771
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  26125833 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 26125771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 29830468 - 29830406
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  29830468 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 29830406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 38416787 - 38416849
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  38416787 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 38416849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 38721456 - 38721406
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  38721456 aacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatat 38721406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 43967848 - 43967786
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  43967848 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 43967786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 44232214 - 44232276
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  44232214 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 44232276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 47386423 - 47386485
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  47386423 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 47386485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 54330827 - 54330889
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  54330827 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 54330889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 55209711 - 55209773
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  55209711 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 55209773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 2760873 - 2760926
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  2760873 aacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaa 2760926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 35381036 - 35381093
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  35381036 aaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 35381093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 34316636 - 34316596
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaa 59  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34316636 aacatcttatatgctaacatttgtatttatatattagttaa 34316596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 36523111 - 36523167
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||    
T  36523111 aacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaa 36523167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 45291957 - 45291905
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45291957 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 45291905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 55091324 - 55091380
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  55091324 aaatcaaacaacatcttacatactaacatttgtatttatatattaattaaaaaatat 55091380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 56080109 - 56080045
Alignment:
Q  9 gaaatgaaacaacatcttatatgctaacattt-gtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||    
T  56080109 gaaatggaacaacatcttatatgataacattttgtatgtatatattagttaaaaaatatagtcaa 56080045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 4467656 - 4467718
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  4467656 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaa 4467718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 12240315 - 12240377
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  12240315 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 12240377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 12625376 - 12625314
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  12625376 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 12625314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 14144594 - 14144648
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    |||| ||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  14144594 aaatcaaacaacatcttacatactaatatttgtatttatatattagttaaaaaat 14144648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 17610405 - 17610343
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||| |||||||||| |||||    
T  17610405 aaattaaacaacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaa 17610343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 19903787 - 19903849
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| |||| | ||||||||||||||||||||||||||||||||| |||| |||||    
T  19903787 aaatcaaacaatatctcacatgctaacatttgtatttatatattagttaaaatatatggtcaa 19903849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 25296717 - 25296779
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  25296717 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 25296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 26170111 - 26170049
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  26170111 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 26170049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 52227139 - 52227097
Alignment:
Q  21 catcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  52227139 catcttatatgctaacatttgtatttatatattagataaaaaa 52227097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 27344085 - 27344138
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  27344085 aaatcaaacaacatcttatatgttaatatttttatttatatattagttaaaaaa 27344138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 10550542 - 10550498
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  10550542 aacatcttacatgctaacatttttatttatatattagttaaaaaa 10550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 38717005 - 38716949
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  38717005 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 38716949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 39307821 - 39307769
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||| ||| || |||||||||||||||||||||||||||||||    
T  39307821 aaattaaacaacattttacatactaacatttgtatttatatattagttaaaaa 39307769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 50205868 - 50205806
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||||||||||   ||||| |||||||||||||||||||||||||| ||| |||||    
T  50205868 aaatcaaacaacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaa 50205806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 51355181 - 51355227
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  51355181 aacaacatcgtatatactaacatttgtatttatatattagctaaaaa 51355227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 35686493 - 35686436
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||| ||| ||| ||||||||||||| |||||||||||| ||| |||||    
T  35686493 aaacaacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaa 35686436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 19433495 - 19433547
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||    
T  19433495 aaatcaaacaacatcttacatgctaatatttgtatttatacaatagttaaaaa 19433547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 30446422 - 30446370
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||| ||| | |||||||||||||||||||||||||| |||||    
T  30446422 aaatcaaacaacattttacaggctaacatttgtatttatatattagtcaaaaa 30446370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 32871496 - 32871552
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||||||| || || || ||||||||||||| ||||||||||||||||||    
T  32871496 aaatcaaacaacatcctacatacttacatttgtatttacatattagttaaaaaatat 32871552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 2068092 - 2068045
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgt 69  Q
    |||||||| | |||||||| ||||||||||||| ||||||||||||||    
T  2068092 atcttatacgttaacatttatatttatatattaattaaaaaatattgt 2068045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 3037086 - 3037043
Alignment:
Q  29 atgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  3037086 atgctaatatttgtatttatatattagttaaaaagtatggtcaa 3037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 5119081 - 5119120
Alignment:
Q  33 taacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  5119081 taacatttgtatttatatattaattaaaaaatatggtcaa 5119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 17446770 - 17446821
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaa 61  Q
    |||| ||||||||||||| ||| ||| ||||||||||||| |||||||||||    
T  17446770 aaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaa 17446821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 29051782 - 29051747
Alignment:
Q  37 atttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||||||||||||||||||||| |||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaa 29051747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 9029586 - 9029648
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| ||||||  |||||| ||||||||||||| |||||||||||| ||| |||||    
T  9029586 aaatcaaacaatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaa 9029648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 27407759 - 27407808
Alignment:
Q  15 aaacaacatcttata--tgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||||||||| |  |||||| ||||||||||||||||||||||||||    
T  27407759 aaacaacatcttacacatgctaatatttgtatttatatattagttaaaaa 27407808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 31010339 - 31010277
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| |||||| ||||||| |||| |||||||| |||||||||||| ||| |||||    
T  31010339 aaatcaaacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaa 31010277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 37767095 - 37767157
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| |||||| || |||||||||||||||||||||  |||||||| ||| |||||    
T  37767095 aaatcaaacaatatcttacattctaacatttgtatttatatatacgttaaaaagtatagtcaa 37767157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 50181179 - 50181129
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||| |||||| ||||||| ||||||||||||| |||| |||||||||||    
T  50181179 aacaatatcttacatgctaatatttgtatttatacattaattaaaaaatat 50181129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 25633298 - 25633265
Alignment:
Q  33 taacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||||||||||||||||| |||||||||||    
T  25633298 taacatttgtatttatatattaattaaaaaatat 25633265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 28494327 - 28494294
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatat 52  Q
    |||||||||||| |||||||||||||||||||||    
T  28494327 aacatcttatatactaacatttgtatttatatat 28494294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 51456510 - 51456543
Alignment:
Q  29 atgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||| ||||||||||||||||||||||||||    
T  51456510 atgctaaaatttgtatttatatattagttaaaaa 51456543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 25918328 - 25918276
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| |||| |||||||| ||| ||||||||    
T  25918328 aaatcaaacaacatcttacatgctaatatttatatttatacattggttaaaaa 25918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 27755842 - 27755806
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatat 52  Q
    ||||||||||||  |||||||||||||||||||||||    
T  27755842 aacaacatcttacgtgctaacatttgtatttatatat 27755806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 29585982 - 29586038
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||| ||||| ||| ||| ||||||||||||||| |||||| |||||||||||    
T  29585982 aaatcaaaaaacattttacatgttaacatttgtatttacatattaattaaaaaatat 29586038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 34652157 - 34652193
Alignment:
Q  14 gaaacaacatcttatatgctaacatttgtatttatat 50  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  34652157 gaaacaacatcttacatgctaatatttgtatttatat 34652193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 22575723 - 22575780
Alignment:
Q  9 gaaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22575723 gaaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatat 22575780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 6402547 - 6402609
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  6402547 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 6402609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 11641204 - 11641266
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  11641204 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 11641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 31445048 - 31444986
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||    
T  31445048 aaattaaacaacatcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaa 31444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 36757623 - 36757685
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  36757623 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 36757685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 44647856 - 44647906
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  44647856 aacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatat 44647906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 30385291 - 30385344
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  30385291 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaa 30385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 3485344 - 3485400
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  3485344 aaatcaaacaacaccttacatgataacatttgtatttatatattagttaaaaaatat 3485400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 9342782 - 9342838
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  9342782 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatat 9342838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 16120577 - 16120639
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  16120577 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 16120639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 17306079 - 17306017
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||| ||||||| ||| |||||    
T  17306079 aaatcaaacaacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaa 17306017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 30003658 - 30003596
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  30003658 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 30003596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 40771909 - 40771971
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  40771909 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 40771971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 40977625 - 40977687
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  40977625 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 40977687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 6766488 - 6766435
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  6766488 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 6766435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 34635019 - 34634970
Alignment:
Q  23 tcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  34635019 tcttacatgttaacatttgtatttatatattagttaaaaaatattatcaa 34634970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 40800524 - 40800576
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  40800524 aaatcaaacaacatcttacatgctaacatttgta-ttatatattagttaaaaaa 40800576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 42735302 - 42735355
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  42735302 aaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaa 42735355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 28030824 - 28030880
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||||| ||| |||||    
T  28030824 aacaatatcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaa 28030880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 30701843 - 30701781
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| | ||||| ||||||||||||| |||||||||||| ||| |||||    
T  30701843 aaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaa 30701781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 36399223 - 36399161
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| | ||||| ||||||||||||| |||||||||||| ||| |||||    
T  36399223 aaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaa 36399161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 42788679 - 42788741
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| |||| || ||||||||||||| |||||||||||| ||| |||||    
T  42788679 aaatcaaacaacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaa 42788741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 15382563 - 15382616
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| || |||| |||||||||||||||||| ||||||||    
T  15382563 aaatcaaacaacatcttacatactaatatttgtatttatatattatttaaaaaa 15382616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 44644511 - 44644548
Alignment:
Q  29 atgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  44644511 atgctaacatttgtatttatatatttgttaaaaaatat 44644548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 7568623 - 7568675
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| |  ||||||||| |||||||||||||||||||||    
T  7568623 aaatcaaacaacatcttacacactaacatttatatttatatattagttaaaaa 7568675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 24321386 - 24321334
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| |||||| |||||| ||||||| ||||||||||||| ||||||||||||    
T  24321386 aaatcaaacaatatcttacatgctaatatttgtatttatacattagttaaaaa 24321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 48375127 - 48375071
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||  ||||| ||||||| ||||||||||||| ||||||||||||||||    
T  48375127 aaatcaaacaatgtcttacatgctaatatttgtatttataaattagttaaaaaatat 48375071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 38153423 - 38153466
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||    
T  38153423 aacatcttacatgataacatttgtatttatatgttagttaaaaa 38153466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 9881395 - 9881349
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||||||||||| ||| |||||||| ||| |||||||||||||||||    
T  9881395 aacaacatcttacatgataacatttatatgtatatattagttaaaaa 9881349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 19711835 - 19711885
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||| |||||| || |||||||||||| |||||||||||||||    
T  19711835 aacagcatcttacatgctatcacttgtatttatatgttagttaaaaaatat 19711885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 25695506 - 25695472
Alignment:
Q  29 atgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||||||||||| ||||||||||||||||||||||    
T  25695506 atgctaacatttatatttatatattagttaaaaaa 25695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 27292765 - 27292703
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||| ||||||||| ||||||| |||||||||||||  ||||||||||| ||| |||||    
T  27292765 aaatcaaataacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaa 27292703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 50972777 - 50972823
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||| || ||||||| |||||||||||||||||||||| |||||||    
T  50972777 aacaatattttatatgttaacatttgtatttatatattatttaaaaa 50972823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 52024151 - 52024089
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| | ||||| |||| |||||||| |||||||||||| ||| |||||    
T  52024151 aaatcaaacaacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaa 52024089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 4302234 - 4302181
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||    
T  4302234 aacatcttacatgctaatatttatatttatacattagttaaaaaacattatcaa 4302181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 6406118 - 6406151
Alignment:
Q  39 ttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||||||||||||||||||| |||||    
T  6406118 ttgtatttatatattagttaaaaaatatagtcaa 6406151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 14777157 - 14777101
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| ||  ||| |||||||||||||||  |||||||||||||    
T  14777157 aaatcaaacaacatcttacatattaatatttgtatttatataacagttaaaaaatat 14777101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 49662496 - 49662532
Alignment:
Q  143 tttaaaaacacataaactgaattaaactaaaacaaat 179  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  49662496 tttaaaaacacataaattgaatcaaactaaaacaaat 49662532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 51021008 - 51021056
Alignment:
Q  19 aacatcttatatgctaacatttgtat-ttatatattagttaaaaaatat 66  Q
    ||||||||| ||||||||||||||   ||||||||||||||||||||||    
T  51021008 aacatcttacatgctaacatttgtgcattatatattagttaaaaaatat 51021056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 41252909 - 41252956
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41252909 aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 41252956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 15332948 - 15332997
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15332948 aaacaacatcttacatgctaacatttgtatttatatattagttaaaaaat 15332997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 41751552 - 41751603
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  41751552 aaacaacatcgtaaatgctaacatttgtatttatatattagttaaaaaatat 41751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 41943339 - 41943280
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgt 69  Q
    |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  41943339 aaatcaaacaacatcttatatattaacatttgtatttaaatattagttaaaaaatattgt 41943280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 13499472 - 13499534
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  13499472 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 13499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 27334868 - 27334930
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  27334868 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 27334930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 30213929 - 30213867
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  30213929 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 30213867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 33415924 - 33415862
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  33415924 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 33415862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38137949 - 38137887
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  38137949 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 38137887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 39866278 - 39866340
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  39866278 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 39866340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 42490333 - 42490395
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  42490333 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 42490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 42761620 - 42761682
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  42761620 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 42761682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 3017902 - 3017854
Alignment:
Q  24 cttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  3017902 cttatatgctaacatttgtatttatataatagttaaaaaatatggtcaa 3017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 17643851 - 17643795
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtca 71  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  17643851 aaacaatatcttacatgctaacatttgtatttacatattagttaaaaaatatagtca 17643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 27010611 - 27010663
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  27010611 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 27010663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 20765321 - 20765259
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| |||||    
T  20765321 aaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaa 20765259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 21797681 - 21797619
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  21797681 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 21797619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 27813445 - 27813487
Alignment:
Q  30 tgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaa 27813487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 30057418 - 30057368
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  30057418 aacatcatcttatatgctaacatttgcttttatatattagttaaaaaatat 30057368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 6910459 - 6910403
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| ||| ||| ||||||||||||| ||||||||||||||||    
T  6910459 aaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaaatat 6910403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 15568072 - 15568128
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||| |||||| | | ||||||||||||||||||||||||||||||||||    
T  15568072 aaataaaacaatatcttacacggtaacatttgtatttatatattagttaaaaaatat 15568128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 21005418 - 21005356
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||| ||||||||||||| ||||||| ||| |||||    
T  21005418 aaatcaaacaacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaa 21005356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 23940508 - 23940554
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaata 65  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  23940508 aacatcttacatgttaacatttttatttatatattagttaaaaaata 23940554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 28389216 - 28389262
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  28389216 aacaacatcttatatgctaacatttgtctttgtatattagtaaaaaa 28389262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 36227670 - 36227608
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||| || |||||||| |||||    
T  36227670 aaatcaaacaacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaa 36227608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 44856465 - 44856419
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||    
T  44856465 aacaacatcttacatactaacatttgtatttatatgttagttaaaaa 44856419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 3020343 - 3020392
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    ||||||||| |||||||| ||||||| |||||||||||| ||||||||||    
T  3020343 aaacaacatattatatgcgaacatttatatttatatattggttaaaaaat 3020392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 19327474 - 19327523
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||| || ||||||||||||| ||| |||||||||||||||||    
T  19327474 acaacatcttagatcctaacatttgtatctatctattagttaaaaaatat 19327523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 48334658 - 48334710
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  48334658 aaatcaaacaacatcttacatgctaatatttgtatttatata-tagttaaaaaa 48334710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 22786753 - 22786700
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaata 65  Q
    |||| ||||||||||||| |||| |||||||||  |||||||||||||||||||||    
T  22786753 aaatcaaacaacatcttacatgcaaacatttgt--ttatatattagttaaaaaata 22786700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 44561903 - 44561847
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||| |||  ||||||||||||||||| ||||||||||| ||| |||||    
T  44561903 aacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaa 44561847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 47164598 - 47164646
Alignment:
Q  19 aacatcttatatgctaacatttgtattt-atatattagttaaaaaatat 66  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  47164598 aacatcttacatactaacatttgtattttatatattagttaaaaaatat 47164646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 54507766 - 54507714
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| || |||||||||| ||||||||||||    
T  54507766 aaatcaaacaacatcttacatgctaatatctgtatttatacattagttaaaaa 54507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25527520 - 25527473
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||||||||    
T  25527520 aacatcttacatgttaatatttgtatttatatatcagttaaaaaatat 25527473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 52167334 - 52167272
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||  ||| |||||||||||||||||| ||||||| ||| |||||    
T  52167334 aaatcaaacaacatcttacatattaatatttgtatttatatattaattaaaaagtatggtcaa 52167272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 3430420 - 3430473
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||| ||| ||||||| |||| |||| |||||||||||||||||||| |||||    
T  3430420 aacattttacatgctaatatttttattaatatattagttaaaaaatatggtcaa 3430473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 15664105 - 15664138
Alignment:
Q  33 taacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||||||||||||||||| |||||||||||    
T  15664105 taacatttgtatttatatattaattaaaaaatat 15664138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 33803647 - 33803594
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| | ||||| |||| |||||||| |||||||||||||    
T  33803647 aaatcaaacaacatcttacaagctaatatttatatttatacattagttaaaaaa 33803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 43181492 - 43181545
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| || |||| |||| |||||||| |||||||||||||    
T  43181492 aaattaaacaacatcttacatactaatatttatatttatacattagttaaaaaa 43181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 14412255 - 14412287
Alignment:
Q  33 taacatttgtatttatatattagttaaaaaata 65  Q
    |||| ||||||||||||||||||||||||||||    
T  14412255 taacgtttgtatttatatattagttaaaaaata 14412287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 22782389 - 22782336
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaata 65  Q
    |||| ||||||||||||| |||| ||||||||  ||||||| ||||||||||||||    
T  22782389 aaatcaaacaacatcttacatgcaaacatttg--tttatattttagttaaaaaata 22782336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 8970 - 9024
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8970 aaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaat 9024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 138167 - 138221
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  138167 aaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaat 138221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 18090447 - 18090397
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18090447 aacaacatcttatatgctaacatttatatttatatattagttaaaaaatat 18090397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 18035225 - 18035162
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaat 73  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||    
T  18035225 aaatcaaacaacatcttacatgctaacatttgcatttatatattagttaaaaattatggtcaat 18035162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 40716660 - 40716715
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaata 65  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40716660 aaatcaaacaacatcttacatgctaaaatttgtatttatatattagttaaaaaata 40716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 616908 - 616846
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  616908 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 616846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 623301 - 623239
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  623301 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 623239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 14237405 - 14237343
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  14237405 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 14237343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 18044550 - 18044488
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  18044550 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 18044488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 32998575 - 32998513
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  32998575 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 32998513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 33700210 - 33700272
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||    
T  33700210 aaatcaaacaacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaa 33700272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 40494509 - 40494447
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  40494509 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 40494447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 41263935 - 41263873
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  41263935 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 41263873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 132142 - 132086
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  132142 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatat 132086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38957295 - 38957233
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||  ||||||||||||||| |||||    
T  38957295 aaatcaaacaacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaa 38957233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 42587385 - 42587447
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  42587385 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 42587447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 9632280 - 9632224
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| ||||||||||| |||||||||| ||||| |||||||||    
T  9632280 aaatcaaacaacatcttacatgctaacattagtatttatatgttagtgaaaaaatat 9632224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 33905465 - 33905517
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  33905465 aaataaaacaacattttatatgctaacatttatatttttatattagttaaaaa 33905517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 36641995 - 36642047
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  36641995 aaatcaaacaacatcttacatgctaatatttgtatttatatataagttaaaaa 36642047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 40204859 - 40204915
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||||| ||||  ||||||||||||||||||||||||||| |||||||||    
T  40204859 aaatcaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatat 40204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 2766185 - 2766247
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||| |||||||| |||||||||||| ||| |||||    
T  2766185 aaatcaaacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaa 2766247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 3100640 - 3100694
Alignment:
Q  18 caacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  3100640 caacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 3100694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 3370393 - 3370455
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| |||||| ||  |||||||||||||||||||||| ||||||||||| |||||    
T  3370393 aaatcaaacaatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaa 3370455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 5878429 - 5878379
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  5878429 atcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 5878379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 5173377 - 5173320
Alignment:
Q  10 aaatgaaac-aacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||| ||||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  5173377 aaatgaaactaacatcttacatgttaatatttgtatttatatattagttaaataatat 5173320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 7430951 - 7430914
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatatta 54  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7430951 acaacatcttatatgctaccatttgtatttatatatta 7430914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 11162405 - 11162457
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||| |||||    
T  11162405 aacatcttttatgctaacatttgtctttatatattag-taaaaaatatggtcaa 11162457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 32855599 - 32855640
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatata 51  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  32855599 aaatcaaacaacatcttacatgctaacatttgtatttatata 32855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 38497197 - 38497145
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||  ||||||| ||||||||||||| ||||||||||||    
T  38497197 aaatcaaacaacatcttccatgctaatatttgtatttatacattagttaaaaa 38497145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 4270236 - 4270291
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||| ||| ||| ||| ||||||||||||| |||||||||||||||| |||||    
T  4270236 acaacatattacatgttaatatttgtatttatacattagttaaaaaatatggtcaa 4270291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 18020994 - 18020929
Alignment:
Q  10 aaatgaaacaacatcttatatgctaaca---tttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||| |||||| |||||||||   ||||||||| ||||||||||||||||||| |||||    
T  18020994 aaatcaaacaatatcttacatgctaacacattttgtatttgtatattagttaaaaaatatggtcaa 18020929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 8394471 - 8394417
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    |||| ||||||||||||| || |||| ||||||| ||||| ||||||||||||||    
T  8394471 aaatcaaacaacatcttaaatactaatatttgtacttatacattagttaaaaaat 8394417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 10982639 - 10982689
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| |||| |||||| |||||||||| |||||||||||| |||||    
T  10982639 atcttatatactaatatttgtttttatatattggttaaaaaatatggtcaa 10982689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 13216858 - 13216920
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||  ||||||| |||| |||||||| |||||||||||| ||| |||||    
T  13216858 aaatcaaacaacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaa 13216920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 35403641 - 35403579
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| || |||||||||| |||||||||||| ||| |||||    
T  35403641 aaattaaacaacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaa 35403579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 11637907 - 11637855
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| | ||||||||||| | ||||||||||    
T  11637907 aaatcaaacaacatcttacatgctaatacttgtatttatacactagttaaaaa 11637855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 28724009 - 28724037
Alignment:
Q  30 tgctaacatttgtatttatatattagtta 58  Q
    |||||||||||||||||||||||||||||    
T  28724009 tgctaacatttgtatttatatattagtta 28724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 24992275 - 24992337
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  24992275 aaatcaaacaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaa 24992337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 18998812 - 18998756
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  18998812 aaatcaaacaacatcttacatactaacatttgtatttatatattagttaaaaaatat 18998756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 32017330 - 32017282
Alignment:
Q  18 caacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32017330 caacatcttacatgctaacatttgtatttatatattagttaaaaaatat 32017282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 978202 - 978140
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  978202 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 978140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 9502764 - 9502826
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  9502764 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 9502826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 11761191 - 11761129
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||    
T  11761191 aaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaa 11761129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 14634294 - 14634356
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  14634294 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaa 14634356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 33387345 - 33387283
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  33387345 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaa 33387283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3422355 - 3422400
Alignment:
Q  18 caacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  3422355 caacatcttacatgctaacatttgtatttatatattagttaaaaaa 3422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 24916383 - 24916436
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  24916383 aaatcaaacaacatcttatatgctaatatttgtatttataaattagttaaaaaa 24916436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 32400452 - 32400399
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  32400452 aaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaaaa 32400399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 12456777 - 12456833
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  12456777 aaatcaaacaacatcttacatactaacatttgtatttgtatattagttaaaaaatat 12456833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 17476993 - 17476949
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  17476993 aacatcttatatactaacatttgtatttatatattagttaaaaaa 17476949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 27579579 - 27579623
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  27579579 atcttacatgctaacatttgtatttatatattagttaaaaaatat 27579623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 26387021 - 26387072
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  26387021 aaacaacatcttaaatgctaacatttatatttatatgttagttaaaaaatat 26387072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 30355011 - 30355062
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaa 61  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  30355011 aaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaa 30355062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 3472414 - 3472476
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||  |||||||||||||||| |||||    
T  3472414 aaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaa 3472476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 8086167 - 8086229
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| |||||    
T  8086167 aaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaa 8086229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 33587606 - 33587668
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| ||||||||||||| |||||||||||||||| |||||    
T  33587606 aaatcaaacaacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaa 33587668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 12359958 - 12360011
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| |||||| |||||  |||||||||||||||||||||||||||||||||||    
T  12359958 aaatcaaacaatatctttcatgctaacatttgtatttatatattagttaaaaaa 12360011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 9050713 - 9050765
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  9050713 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaa 9050765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 18094223 - 18094270
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  18094223 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaa 18094270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 2825264 - 2825302
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatatta 54  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  2825264 aacaacatcttatatgctaacatttctatttatatatta 2825302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 5947697 - 5947750
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||| ||||||||| | |||||||||||||| |||| ||||||||||||||||    
T  5947697 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaa 5947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 38916396 - 38916449
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| ||| |||||    
T  38916396 aacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaa 38916449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 4671318 - 4671278
Alignment:
Q  26 tatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  4671318 tatatgctatcatttgtatttatatatcagttaaaaaatat 4671278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 6996105 - 6996049
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| |||||| || ||| ||| |||||||| |||||||||||||||||||||||||    
T  6996105 aaatcaaacaatattttacatggtaacatttatatttatatattagttaaaaaatat 6996049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 12007769 - 12007821
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||| ||| |||||| ||||||||||||||||||| |||||||    
T  12007769 aaatcaaacaacattttacatgctagcatttgtatttatatattaattaaaaa 12007821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 40156323 - 40156271
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||| |||||||    
T  40156323 aaatcaaacaacatcttacatgctaatatttgtatttatacattaattaaaaa 40156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 31197850 - 31197889
Alignment:
Q  33 taacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  31197850 taacatttgtatttatattttagttaaaaattattgtcaa 31197889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 7224290 - 7224228
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||| ||| ||||||| ||||||||||||| |||||||| ||| ||| |||||    
T  7224290 aaatcaaacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaa 7224228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 11251239 - 11251177
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||| |||||| || ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  11251239 aaatcaaataacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 11251177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 10822238 - 10822287
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaata 65  Q
    |||||||||||||||| ||||||||| ||  ||| |||||||||||||||    
T  10822238 aacaacatcttatatgttaacatttgcatcaatacattagttaaaaaata 10822287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 37495708 - 37495679
Alignment:
Q  37 atttgtatttatatattagttaaaaaatat 66  Q
    ||||||||||||||||||||||||||||||    
T  37495708 atttgtatttatatattagttaaaaaatat 37495679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 7749874 - 7749918
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatatta 54  Q
    |||| |||||| |||||| |||||||||||| |||||||||||||    
T  7749874 aaattaaacaatatcttacatgctaacatttctatttatatatta 7749918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 27109813 - 27109761
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| |||||||||| || |||| |||||||    
T  27109813 aaatcaaacaacatcttacatgctaatatttgtatttttacattaattaaaaa 27109761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 29492388 - 29492444
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaat 73  Q
    |||| ||||||||||||| ||||| | ||||||| ||||| ||||||||| ||||||    
T  29492388 acaatatcttatatgctaccatttatctttatattttagtcaaaaaatatggtcaat 29492444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 217012 - 217065
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  217012 aaatcaaacaacatcttatatgctaacatttgtatttatatattacttaaaaaa 217065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 53557 - 53613
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||    
T  53557 aaatcaaacaacatcttgcatgctaaaatttgtaattatatattagttaaaaaatat 53613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 4061 - 4011
Alignment:
Q  22 atcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  4061 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaa 4011  T

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Target: scaffold0262 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 22905 - 22851
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  22905 aaatcaaacaacatcttacatgctaacatttgtatttatatatgagttaaaaaat 22851  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 6563351 - 6563289
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  6563351 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 6563289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 18668825 - 18668887
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  18668825 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaa 18668887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 23158046 - 23158100
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaat 64  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  23158046 aaatcaaacaacatcttacatgttaacatttgtatttatatattagttaaaaaat 23158100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 24624078 - 24624140
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  24624078 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 24624140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 32414816 - 32414878
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  32414816 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaa 32414878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 5495374 - 5495321
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  5495374 aaatcaaacaaaatcttacatgctaacatttgtatttatatattagttaaaaaa 5495321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 8101725 - 8101664
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtca 71  Q
    |||| ||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  8101725 aaatcaaataacatcttacatgttaacatttgtatttatatattagttaaaaaatatggtca 8101664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 15337608 - 15337551
Alignment:
Q  15 aaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  15337608 aaacaacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaa 15337551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 31869824 - 31869771
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  31869824 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaa 31869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 19088095 - 19088147
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19088095 aaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 19088147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 3623856 - 3623899
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  3623856 aacatcttacatgctaacatttgtatttatatattagttaaaaa 3623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 2360115 - 2360053
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||| |||||    
T  2360115 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaa 2360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 4148056 - 4147994
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  4148056 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 4147994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 10298710 - 10298772
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||| ||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  10298710 aaatcaaaaaacattttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaa 10298772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 17213921 - 17213983
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  17213921 aaatcaaacaacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaa 17213983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 22054897 - 22054835
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  22054897 aaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 22054835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 28477878 - 28477816
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| |||||||| |||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  28477878 aaatcaaacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtcaa 28477816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 15383067 - 15383119
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  15383067 aaatcaaacaacatcttacatgctaatatttgtatttatagattagttaaaaa 15383119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 24955533 - 24955589
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    |||| ||||||||||||| ||||||| ||||||||||||  ||||||||||||||||    
T  24955533 aaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatat 24955589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 29790331 - 29790279
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| |||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  29790331 aaatcaaacaacaacttacatgctaatatttgtatttatatattagttaaaaa 29790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 1260548 - 1260493
Alignment:
Q  17 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||  |||||||| |||||||||||||||||||||||||||| |||||    
T  1260548 acaaaatcttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaa 1260493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 1040949 - 1040887
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| ||||||||||||| |||||||||||| ||| |||||    
T  1040949 aaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaa 1040887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 7048994 - 7049052
Alignment:
Q  5 gagtgaaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| |||| || |||||||||||||| ||||||||||||||||||| || ||||||||    
T  7048994 gagtcaaatcaaccaacatcttatatggtaacatttgtatttatataataattaaaaaa 7049052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 17155268 - 17155226
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagtta 58  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  17155268 aacaacatcttacatgctaacatttgtatttatatgttagtta 17155226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 17257788 - 17257850
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||||||||| || |||||||||||| ||| |||||    
T  17257788 aaatcaaacaacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaa 17257850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 20226435 - 20226497
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||| ||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  20226435 aaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 20226497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 22120419 - 22120481
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||| ||||| ||||||| ||||||||||||| |||||||||||| ||| |||||    
T  22120419 aaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaa 22120481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 32671941 - 32671879
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| | ||||| ||||||||||||| |||||||||||| ||| |||||    
T  32671941 aaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaa 32671879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 4440969 - 4440913
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||| ||| |||||    
T  4440969 aacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaa 4440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 19240756 - 19240791
Alignment:
Q  37 atttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||||||||||||||||||||||||||||| |||||    
T  19240756 atttgtatttatatattagttaaaaaatatggtcaa 19240791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29694000 - 29693946
Alignment:
Q  18 caacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||| |||| ||||||  |||||||||||||||||||||||||| ||| |||||    
T  29694000 caacaacttacatgctagtatttgtatttatatattagttaaaaattatggtcaa 29693946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 20437150 - 20437203
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| ||||||||||||| ||| | | ||||||||||||| |||||||||||||    
T  20437150 aaatcaaacaacatcttacatgttgatatttgtatttatacattagttaaaaaa 20437203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 24321202 - 24321255
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaa 63  Q
    |||| |||||||||||| ||| |||| |||||| ||||||||| ||||||||||    
T  24321202 aaatcaaacaacatcttgtatactaaaatttgtctttatatatcagttaaaaaa 24321255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 12226100 - 12226048
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| |||||| |||||| ||||||| |||| |||||||| ||||||||||||    
T  12226100 aaatcaaacaatatcttacatgctaatatttatatttatacattagttaaaaa 12226048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 14214069 - 14214105
Alignment:
Q  29 atgctaacatttgtatttatatattagttaaaaaata 65  Q
    |||||||||||| |||||||||||| |||||||||||    
T  14214069 atgctaacatttatatttatatattggttaaaaaata 14214105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 21913689 - 21913653
Alignment:
Q  25 ttatatgctaacatttgtatttatatattagttaaaa 61  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  21913689 ttatatgctaaaatttgtatttatttattagttaaaa 21913653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 28798 - 28851
Alignment:
Q  19 aacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  28798 aacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaa 28851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 161974 - 162037
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaat 73  Q
    |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| ||||||    
T  161974 aaattaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaat 162037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 71085 - 71033
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaa 62  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  71085 aaatcaaacaacatcttaaatgctaatatttgtatttatacattagttaaaaa 71033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 13854 - 13916
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||||||| |||| |||||||| |||||||||||| ||| |||||    
T  13854 aaattaaacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaa 13916  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 100784 - 100846
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| | ||||| ||||||||||||| |||||||||||| ||| |||||    
T  100784 aaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaa 100846  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 67906 - 67968
Alignment:
Q  10 aaatgaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatattgtcaa 72  Q
    |||| ||||||||||||| ||| ||| ||||||||||||| |||||||||||| ||| |||||    
T  67906 aaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaa 67968  T

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Target: scaffold0608 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 1639 - 1589
Alignment:
Q  16 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatat 66  Q
    ||||| |||||| ||||||| ||||||||||||| |||| |||||||||||    
T  1639 aacaatatcttacatgctaatatttgtatttatacattaattaaaaaatat 1589  T

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