View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1500_low_78 (Length: 219)

Name: NF1500_low_78
Description: NF1500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1500_low_78
NF1500_low_78
[»] chr3 (42 HSPs)
chr3 (1-207)||(12372431-12372636)
chr3 (5-140)||(2166137-2166275)
chr3 (11-124)||(27073825-27073940)
chr3 (1-121)||(22246873-22246995)
chr3 (1-142)||(8881500-8881642)
chr3 (5-103)||(8765568-8765668)
chr3 (5-125)||(8145120-8145242)
chr3 (11-101)||(19533678-19533770)
chr3 (11-123)||(19912453-19912568)
chr3 (5-103)||(14977700-14977800)
chr3 (5-122)||(31284006-31284126)
chr3 (5-73)||(13906686-13906754)
chr3 (1-142)||(16228443-16228586)
chr3 (5-102)||(18747701-18747800)
chr3 (1-144)||(16242292-16242435)
chr3 (6-122)||(20021921-20022039)
chr3 (11-142)||(19170250-19170382)
chr3 (1-125)||(34276536-34276664)
chr3 (5-121)||(20886745-20886862)
chr3 (5-121)||(28326237-28326354)
chr3 (1-118)||(16223370-16223489)
chr3 (5-125)||(13938949-13939071)
chr3 (6-121)||(5509945-5510062)
chr3 (11-100)||(12771311-12771401)
chr3 (11-124)||(19169928-19170042)
chr3 (5-103)||(19909132-19909232)
chr3 (3-144)||(8115395-8115528)
chr3 (6-101)||(17134988-17135085)
chr3 (11-102)||(19573684-19573777)
chr3 (11-53)||(27412768-27412810)
chr3 (5-86)||(3429327-3429410)
chr3 (5-142)||(18457214-18457352)
chr3 (1-102)||(19387949-19388052)
chr3 (11-74)||(8770489-8770552)
chr3 (6-103)||(20431366-20431465)
chr3 (7-45)||(22470507-22470545)
chr3 (75-125)||(25851125-25851175)
chr3 (5-103)||(18735373-18735473)
chr3 (5-54)||(52935633-52935682)
chr3 (6-43)||(6075927-6075964)
chr3 (5-46)||(18535723-18535764)
chr3 (1-33)||(22450414-22450446)
[»] chr8 (53 HSPs)
chr8 (1-144)||(21316636-21316781)
chr8 (5-125)||(15176535-15176656)
chr8 (11-124)||(18570402-18570517)
chr8 (6-142)||(17998109-17998247)
chr8 (1-125)||(24388471-24388596)
chr8 (1-142)||(21230780-21230923)
chr8 (8-125)||(30832811-30832930)
chr8 (5-121)||(30117761-30117879)
chr8 (5-103)||(19265716-19265816)
chr8 (5-125)||(28621477-28621598)
chr8 (12-115)||(24090988-24091092)
chr8 (5-122)||(24583274-24583393)
chr8 (11-124)||(26139661-26139776)
chr8 (1-121)||(14271717-14271839)
chr8 (5-101)||(20400230-20400328)
chr8 (1-144)||(29765491-29765636)
chr8 (1-103)||(19784879-19784983)
chr8 (5-103)||(24109137-24109237)
chr8 (11-121)||(24381435-24381547)
chr8 (11-103)||(25481614-25481709)
chr8 (1-101)||(2638616-2638718)
chr8 (1-103)||(14077017-14077120)
chr8 (1-121)||(17980669-17980791)
chr8 (1-125)||(24389628-24389754)
chr8 (1-125)||(26888358-26888484)
chr8 (5-121)||(28904070-28904188)
chr8 (5-94)||(15557292-15557383)
chr8 (5-101)||(19791289-19791387)
chr8 (8-121)||(24851050-24851165)
chr8 (8-103)||(24380459-24380556)
chr8 (5-123)||(26829569-26829689)
chr8 (5-53)||(37527129-37527177)
chr8 (1-101)||(4007250-4007352)
chr8 (10-138)||(22501694-22501823)
chr8 (5-125)||(23867932-23868054)
chr8 (5-46)||(5856732-5856773)
chr8 (5-42)||(6886625-6886662)
chr8 (11-101)||(7985013-7985105)
chr8 (5-121)||(15058607-15058724)
chr8 (1-99)||(24091714-24091814)
chr8 (1-53)||(34499181-34499233)
chr8 (5-103)||(17835438-17835537)
chr8 (73-144)||(18822444-18822515)
chr8 (8-71)||(24908832-24908895)
chr8 (8-71)||(24911053-24911116)
chr8 (15-53)||(17100319-17100357)
chr8 (5-46)||(6286238-6286279)
chr8 (20-125)||(24520120-24520225)
chr8 (5-42)||(28275425-28275462)
chr8 (11-125)||(18446968-18447086)
chr8 (10-103)||(24518695-24518789)
chr8 (1-101)||(12342988-12343091)
chr8 (5-41)||(13313374-13313410)
[»] chr6 (52 HSPs)
chr6 (1-144)||(21932326-21932472)
chr6 (7-135)||(8038155-8038285)
chr6 (5-125)||(14723557-14723678)
chr6 (1-125)||(17822123-17822250)
chr6 (10-135)||(9840888-9841015)
chr6 (7-134)||(2588159-2588288)
chr6 (6-125)||(14076268-14076389)
chr6 (6-125)||(19594081-19594202)
chr6 (1-103)||(1636528-1636632)
chr6 (1-125)||(19577636-19577761)
chr6 (11-144)||(8066505-8066640)
chr6 (5-102)||(9339081-9339179)
chr6 (11-142)||(22411513-22411646)
chr6 (1-121)||(21079820-21079941)
chr6 (5-103)||(22564652-22564752)
chr6 (5-103)||(23644420-23644520)
chr6 (1-121)||(21060503-21060624)
chr6 (5-103)||(24469692-24469792)
chr6 (5-102)||(9507373-9507472)
chr6 (4-121)||(20080613-20080732)
chr6 (15-124)||(21760520-21760631)
chr6 (5-122)||(23005349-23005468)
chr6 (5-122)||(23782898-23783017)
chr6 (1-76)||(8246536-8246611)
chr6 (11-125)||(21152600-21152717)
chr6 (11-103)||(24479918-24480012)
chr6 (8-102)||(9897973-9898069)
chr6 (10-73)||(6629082-6629146)
chr6 (11-124)||(9848036-9848151)
chr6 (5-144)||(22404357-22404497)
chr6 (1-125)||(9519604-9519730)
chr6 (1-121)||(27961090-27961212)
chr6 (5-51)||(31878957-31879003)
chr6 (25-125)||(17383630-17383731)
chr6 (5-53)||(18171356-18171404)
chr6 (11-124)||(20004289-20004404)
chr6 (1-103)||(32759863-32759967)
chr6 (4-43)||(3358098-3358137)
chr6 (1-84)||(14641545-14641630)
chr6 (1-43)||(19246232-19246274)
chr6 (1-75)||(21687228-21687302)
chr6 (6-143)||(26820738-26820875)
chr6 (5-48)||(14077988-14078031)
chr6 (1-48)||(22845950-22845997)
chr6 (5-121)||(24389250-24389368)
chr6 (11-41)||(11136876-11136906)
chr6 (1-43)||(14727091-14727133)
chr6 (7-53)||(22569800-22569846)
chr6 (5-121)||(30356139-30356257)
chr6 (9-119)||(16167696-16167807)
chr6 (21-74)||(17379568-17379621)
chr6 (1-46)||(17847733-17847778)
[»] chr1 (53 HSPs)
chr1 (5-142)||(22426618-22426757)
chr1 (5-125)||(26022267-26022389)
chr1 (8-143)||(12011290-12011426)
chr1 (1-121)||(14235383-14235505)
chr1 (11-125)||(18527605-18527721)
chr1 (11-101)||(33192248-33192340)
chr1 (1-124)||(20107728-20107852)
chr1 (1-125)||(18734684-18734810)
chr1 (1-143)||(27116322-27116465)
chr1 (6-125)||(25402539-25402660)
chr1 (5-143)||(26101714-26101854)
chr1 (1-125)||(14782402-14782528)
chr1 (5-125)||(15542411-15542533)
chr1 (1-144)||(13267698-13267843)
chr1 (15-142)||(22624471-22624600)
chr1 (6-125)||(26611435-26611556)
chr1 (11-125)||(15631032-15631150)
chr1 (5-125)||(21663193-21663316)
chr1 (1-124)||(27546256-27546382)
chr1 (29-125)||(22507501-22507599)
chr1 (6-121)||(15811549-15811666)
chr1 (6-125)||(18832087-18832208)
chr1 (5-115)||(15158892-15159004)
chr1 (5-99)||(16180616-16180712)
chr1 (11-125)||(21450639-21450755)
chr1 (7-103)||(28009640-28009738)
chr1 (7-138)||(15526901-15527033)
chr1 (5-125)||(21333174-21333292)
chr1 (5-103)||(14780596-14780696)
chr1 (10-143)||(22621646-22621783)
chr1 (1-138)||(22626253-22626391)
chr1 (6-74)||(22665711-22665779)
chr1 (7-103)||(44797011-44797109)
chr1 (20-125)||(9403212-9403319)
chr1 (1-124)||(16915295-16915420)
chr1 (1-94)||(17444970-17445064)
chr1 (5-103)||(16114694-16114794)
chr1 (5-103)||(16817211-16817311)
chr1 (5-103)||(18827290-18827390)
chr1 (15-101)||(24282898-24282986)
chr1 (1-103)||(12210157-12210263)
chr1 (1-101)||(15571787-15571889)
chr1 (5-72)||(17543218-17543285)
chr1 (1-121)||(35133760-35133882)
chr1 (8-53)||(9783085-9783130)
chr1 (15-125)||(16786206-16786318)
chr1 (1-42)||(23035019-23035060)
chr1 (9-42)||(26647463-26647496)
chr1 (58-119)||(7881673-7881736)
chr1 (6-46)||(24901162-24901202)
chr1 (8-119)||(21848504-21848617)
chr1 (1-46)||(26652528-26652574)
chr1 (5-87)||(26581483-26581567)
[»] chr2 (40 HSPs)
chr2 (6-126)||(25537427-25537549)
chr2 (5-125)||(27907625-27907747)
chr2 (5-144)||(18758154-18758295)
chr2 (5-152)||(25886294-25886443)
chr2 (6-123)||(17350852-17350971)
chr2 (5-125)||(25196483-25196605)
chr2 (11-142)||(25532091-25532224)
chr2 (5-142)||(25922460-25922598)
chr2 (1-124)||(29144507-29144632)
chr2 (1-144)||(34574366-34574511)
chr2 (1-103)||(18970872-18970975)
chr2 (11-103)||(17199421-17199514)
chr2 (5-121)||(27420948-27421065)
chr2 (1-144)||(22568906-22569052)
chr2 (11-124)||(24086415-24086530)
chr2 (5-101)||(11464420-11464518)
chr2 (5-125)||(28930146-28930268)
chr2 (5-103)||(20379180-20379280)
chr2 (9-121)||(22627261-22627374)
chr2 (1-74)||(29850941-29851014)
chr2 (15-124)||(20852955-20853066)
chr2 (1-101)||(32086944-32087046)
chr2 (5-100)||(17891628-17891725)
chr2 (1-71)||(23010142-23010212)
chr2 (6-125)||(27540369-27540490)
chr2 (12-124)||(21905599-21905713)
chr2 (1-53)||(26313124-26313176)
chr2 (5-119)||(29717461-29717574)
chr2 (7-121)||(32141496-32141612)
chr2 (8-71)||(18553217-18553280)
chr2 (5-75)||(18545196-18545266)
chr2 (7-52)||(26651742-26651787)
chr2 (11-48)||(28918139-28918176)
chr2 (8-53)||(29834811-29834856)
chr2 (5-143)||(34579876-34580016)
chr2 (5-143)||(34585625-34585765)
chr2 (1-103)||(8501609-8501713)
chr2 (20-125)||(18120666-18120773)
chr2 (1-101)||(19139540-19139640)
chr2 (1-51)||(18458464-18458514)
[»] chr7 (53 HSPs)
chr7 (1-144)||(9134661-9134806)
chr7 (11-144)||(26249184-26249319)
chr7 (1-125)||(5236965-5237091)
chr7 (1-124)||(6046400-6046525)
chr7 (5-134)||(21502717-21502848)
chr7 (5-125)||(10611585-10611707)
chr7 (1-124)||(9978158-9978283)
chr7 (11-142)||(13252766-13252899)
chr7 (6-125)||(20597472-20597593)
chr7 (5-103)||(8317544-8317644)
chr7 (11-125)||(25692661-25692777)
chr7 (6-124)||(11804572-11804691)
chr7 (8-138)||(10418417-10418548)
chr7 (7-121)||(2506915-2507031)
chr7 (11-124)||(2927747-2927862)
chr7 (11-125)||(8052537-8052654)
chr7 (11-103)||(20577398-20577492)
chr7 (15-144)||(3585635-3585767)
chr7 (6-125)||(9078986-9079107)
chr7 (6-121)||(15170868-15170984)
chr7 (6-125)||(18986848-18986969)
chr7 (6-125)||(19001476-19001597)
chr7 (1-101)||(23127993-23128095)
chr7 (6-87)||(8977574-8977656)
chr7 (5-119)||(5471837-5471949)
chr7 (1-143)||(9288764-9288908)
chr7 (4-141)||(21233960-21234098)
chr7 (7-75)||(21707443-21707511)
chr7 (5-124)||(4450543-4450665)
chr7 (8-121)||(5221074-5221189)
chr7 (3-103)||(6039398-6039500)
chr7 (1-125)||(9298574-9298700)
chr7 (7-101)||(1589135-1589231)
chr7 (1-103)||(10332298-10332402)
chr7 (6-124)||(13287814-13287934)
chr7 (10-103)||(144871-144966)
chr7 (5-121)||(5046939-5047054)
chr7 (1-101)||(6018254-6018356)
chr7 (11-125)||(39270381-39270496)
chr7 (9-116)||(7399219-7399328)
chr7 (6-99)||(11578743-11578837)
chr7 (7-52)||(9767732-9767777)
chr7 (5-121)||(15611142-15611259)
chr7 (1-53)||(1810850-1810902)
chr7 (28-125)||(3173118-3173217)
chr7 (5-103)||(9722345-9722445)
chr7 (5-43)||(13280715-13280753)
chr7 (1-48)||(2455294-2455340)
chr7 (5-42)||(9918124-9918161)
chr7 (5-42)||(9926036-9926073)
chr7 (6-51)||(23897188-23897233)
chr7 (6-42)||(1586148-1586184)
chr7 (15-71)||(8317193-8317249)
[»] chr4 (43 HSPs)
chr4 (1-144)||(17335454-17335599)
chr4 (6-126)||(17108589-17108711)
chr4 (19-144)||(19603973-19604100)
chr4 (5-125)||(17711178-17711300)
chr4 (11-125)||(22171621-22171736)
chr4 (11-125)||(16928796-16928912)
chr4 (5-125)||(15166340-15166462)
chr4 (1-103)||(25025001-25025104)
chr4 (1-125)||(9536854-9536982)
chr4 (5-124)||(17024793-17024916)
chr4 (1-103)||(8968170-8968274)
chr4 (5-121)||(11252232-11252349)
chr4 (5-103)||(19883615-19883715)
chr4 (1-138)||(20828238-20828376)
chr4 (10-134)||(14573312-14573438)
chr4 (6-87)||(7583703-7583785)
chr4 (5-121)||(18447543-18447660)
chr4 (8-101)||(5691652-5691747)
chr4 (1-103)||(19556638-19556740)
chr4 (13-144)||(10106148-10106281)
chr4 (10-125)||(9849816-9849932)
chr4 (5-53)||(17434380-17434428)
chr4 (6-103)||(9053900-9053998)
chr4 (1-46)||(9263449-9263494)
chr4 (1-74)||(18750749-18750822)
chr4 (5-101)||(22350343-22350440)
chr4 (1-101)||(23083597-23083698)
chr4 (5-103)||(12246667-12246767)
chr4 (10-46)||(19919245-19919281)
chr4 (20-144)||(11782333-11782459)
chr4 (15-125)||(10432050-10432162)
chr4 (5-100)||(25096197-25096294)
chr4 (5-53)||(4617040-4617088)
chr4 (8-101)||(10236486-10236580)
chr4 (1-48)||(11241048-11241095)
chr4 (5-103)||(13588612-13588712)
chr4 (7-75)||(15047691-15047759)
chr4 (7-75)||(15106665-15106733)
chr4 (5-74)||(17218454-17218523)
chr4 (7-101)||(17277741-17277837)
chr4 (76-124)||(4616939-4616987)
chr4 (17-53)||(12836182-12836218)
chr4 (1-103)||(19547151-19547254)
[»] chr5 (40 HSPs)
chr5 (6-124)||(19003869-19003989)
chr5 (1-124)||(20860212-20860337)
chr5 (1-120)||(17469657-17469778)
chr5 (1-103)||(24513285-24513389)
chr5 (5-142)||(19052956-19053095)
chr5 (8-121)||(26348318-26348433)
chr5 (11-123)||(24142281-24142395)
chr5 (1-101)||(24263849-24263951)
chr5 (11-124)||(23387656-23387771)
chr5 (5-142)||(34131941-34132080)
chr5 (1-103)||(19761680-19761783)
chr5 (5-144)||(29987809-29987950)
chr5 (1-94)||(22845894-22845989)
chr5 (8-136)||(24162117-24162246)
chr5 (20-103)||(24320640-24320725)
chr5 (11-124)||(24658409-24658523)
chr5 (1-100)||(28666389-28666490)
chr5 (1-124)||(16522002-16522128)
chr5 (5-125)||(19006951-19007074)
chr5 (5-142)||(20548556-20548694)
chr5 (11-53)||(15199012-15199054)
chr5 (4-143)||(29798898-29799039)
chr5 (10-121)||(18227488-18227600)
chr5 (8-103)||(24849673-24849769)
chr5 (1-121)||(28254767-28254889)
chr5 (5-100)||(25400839-25400936)
chr5 (30-103)||(26253363-26253437)
chr5 (5-42)||(18832179-18832216)
chr5 (5-121)||(31600178-31600296)
chr5 (5-138)||(18939380-18939514)
chr5 (8-43)||(24262023-24262058)
chr5 (5-101)||(34488753-34488851)
chr5 (78-140)||(22797606-22797668)
chr5 (7-53)||(24188844-24188890)
chr5 (5-75)||(26117361-26117431)
chr5 (11-48)||(22797529-22797566)
chr5 (5-42)||(23266767-23266804)
chr5 (8-53)||(26253438-26253483)
chr5 (12-72)||(23214935-23214995)
chr5 (1-45)||(26315140-26315183)
[»] scaffold0032 (1 HSPs)
scaffold0032 (11-125)||(92937-93053)
[»] scaffold0056 (1 HSPs)
scaffold0056 (5-125)||(22908-23030)
[»] scaffold0258 (1 HSPs)
scaffold0258 (14-124)||(20363-20475)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-124)||(4697-4812)
[»] scaffold0555 (1 HSPs)
scaffold0555 (11-103)||(6347-6441)
[»] scaffold0451 (2 HSPs)
scaffold0451 (1-125)||(5602-5728)
scaffold0451 (8-53)||(10199-10244)
[»] scaffold0005 (1 HSPs)
scaffold0005 (10-134)||(243938-244064)
[»] scaffold0086 (1 HSPs)
scaffold0086 (5-102)||(11988-12086)
[»] scaffold0024 (1 HSPs)
scaffold0024 (8-103)||(41233-41330)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-103)||(21334-21434)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-121)||(95500-95612)
[»] scaffold0072 (1 HSPs)
scaffold0072 (7-101)||(38187-38283)
[»] scaffold0094 (1 HSPs)
scaffold0094 (1-103)||(12125-12228)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-121)||(88535-88657)
[»] scaffold0019 (1 HSPs)
scaffold0019 (11-103)||(182620-182714)
[»] scaffold0386 (1 HSPs)
scaffold0386 (1-94)||(4969-5064)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-53)||(192068-192116)
[»] scaffold0015 (1 HSPs)
scaffold0015 (3-42)||(201933-201972)
[»] scaffold0671 (1 HSPs)
scaffold0671 (5-124)||(3290-3411)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-103)||(41634-41739)
[»] scaffold1017 (1 HSPs)
scaffold1017 (8-53)||(545-590)
[»] scaffold0360 (1 HSPs)
scaffold0360 (5-46)||(16570-16611)
[»] scaffold0441 (1 HSPs)
scaffold0441 (74-125)||(2139-2190)
[»] scaffold0115 (1 HSPs)
scaffold0115 (5-75)||(36234-36304)


Alignment Details
Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12372431 - 12372636
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtttttgaagtaattcacgaacaaatc 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  12372431 ttttgggacatttgtaatgttttctgtatttgagtctgtaattctagtcttccagaaacatagtaattttagggtttttgaagtaattcacgaacaaatc 12372530  T
Q  101 atgtgaattggcaaagcaagaacattcggagatttatgaagactattggaagnnnnnnnnnttaagagtcaacaggcctcaaaagactttatagactgag 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||    
T  12372531 atgtgaatcggcaaagcaagaacattcagagatttatgaagactattggaag-ataaaaaattaagagtcaacaggcctcaagagactttatagactgag 12372629  T
Q  201 gaatatt 207  Q
    |||||||    
T  12372630 gaatatt 12372636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 2166137 - 2166275
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaaatca 101  Q
    ||||| ||||||||||||||||||||||| | |||||||||||| ||||  | |||||| ||||||||||   |||||||||||||||||||| ||||||    
T  2166137 gggacttttgtaatgttttctatatttgaatttgtaattctagttttcccgaaacatagcaattttaggggtttttttgaagtaattcacgaagaaatca 2166236  T
Q  102 tgtgaattggcaaagcaagaacattcggagatttatgaa 140  Q
    ||  |||||||||| ||||||||| || |||||| ||||    
T  2166237 tgcaaattggcaaatcaagaacatccgaagatttgtgaa 2166275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 27073940 - 27073825
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| ||||||||  |||    
T  27073940 tttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttagcgggtttttgaagtaattcacgaagaaatcatgcaaat 27073841  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  27073840 cggcaaatcaagaaca 27073825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22246995 - 22246873
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  ||||||  | |||||| |||||||||  |||||||| |||||||||||| |||    
T  22246995 ttttgggacatttgtaatgttttctatatttaagtctgtaattctgttcttcctaaaacatagaaattttaggatgtttttgatgtaattcacgaagaaa 22246896  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    ||||||  || ||||||||||||    
T  22246895 tcatgtatatcggcaaagcaaga 22246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8881500 - 8881642
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    |||| |||| ||| ||||||||||||||||||||||||||||| |||| ||||  | | |||| ||||||||||  ||||||||||||||||||| ||||    
T  8881500 ttttaggacttttataatgttttctatatttgagtctgtaattatagttttcccaaaatatagcaattttagggggttttgaagtaattcacgaagaaat 8881599  T
Q  100 catgtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    ||||  ||| |||||| |||||||||| | ||| |||||||||    
T  8881600 catgcaaatcggcaaatcaagaacatttgaagaattatgaaga 8881642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 8765668 - 8765568
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||   | |||||| |||||||  ||||||||||||||||||||||| |||||||    
T  8765668 gggacttttgtaatgttttctatatttgagtctgtaattctagttttcttgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcat 8765569  T
Q  103 g 103  Q
    |    
T  8765568 g 8765568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 8145242 - 8145120
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||| ||||  | |||||| |||||||  ||||||||||| |||||||||||||||||||    
T  8145242 gggacttttgtaatgttttctatatttgagtatgtaattatagttttcccgaaacatagcaattttagggggtttttgaaataattcacgaacaaatcat 8145143  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| ||| |||||    
T  8145142 gcaaatcggcaaatcaataacat 8145120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 19533770 - 19533678
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||  | |||||| ||||| |  ||||||||||||||||||||||| ||||||    
T  19533770 tttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaatttgagggggtttttgaagtaattcacgaagaaatca 19533678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 19912568 - 19912453
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta---gggtttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    |||||||||||||||||||||||| ||||||||||||| ||||  | |||||  |||||||   ||||||||||||||||||| ||| ||||||||  ||    
T  19912568 tttgtaatgttttctatatttgagactgtaattctagttttcccgaaacataacaattttaagggggtttttgaagtaattcatgaagaaatcatgcaaa 19912469  T
Q  108 ttggcaaagcaagaac 123  Q
    |||||||| |||||||    
T  19912468 ttggcaaatcaagaac 19912453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 14977800 - 14977700
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||  | |||||| | |||||  ||| ||||||||||||||||||| |||||||    
T  14977800 gggacttttgtaatgttttctatatttgagtatgtaattctagttttcccgaaacatagcatttttaggggggttttgaagtaattcacgaagaaatcat 14977701  T
Q  103 g 103  Q
    |    
T  14977700 g 14977700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 31284006 - 31284126
Alignment:
Q  5 gggacatttgtaatgttttct-atatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | ||||  | |||||| |||||||||  |||||||| |||||| ||||| ||||||    
T  31284006 gggacatttgtaatgtttttttatatttgagtctgtaattctattattcccaaaacatagcaattttagggtgtttttgatgtaattgacgaagaaatca 31284105  T
Q  102 tgtgaattggcaaagcaagaa 122  Q
    ||  ||| |||||||||||||    
T  31284106 tgcaaatcggcaaagcaagaa 31284126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 13906686 - 13906754
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||| |||||||||    
T  13906686 gggacatttgtaatgttttctatatttgagtctgtaattctattcttcccgaaacatagcaattttagg 13906754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16228443 - 16228586
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||||| ||||||||||||||||||| ||| |||||| | ||||  | |||||| ||||||||||  |||||||||||||||| ||| |||    
T  16228443 ttttgggacttttgtcatgttttctatatttgagtttgtgattctaattttcccgaaacatagaaattttaggggttttttgaagtaattcaagaagaaa 16228542  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    |||||  ||| || ||| |||||||| ||| ||| || ||||||    
T  16228543 tcatgcaaatcggaaaatcaagaacaatcgaagaattgtgaaga 16228586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 18747800 - 18747701
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||  | ||||||  ||||||  ||| ||||||||||||||||||| |||||||    
T  18747800 gggacttttgtaatgttttctatatttgagtatgtaattctagttttcccgaaacatagctattttatggggattttgaagtaattcacgaagaaatcat 18747701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16242292 - 16242435
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaa 98  Q
    ||||| ||| ||||||| |||||||||  ||||||||||||||||||| || |  | |||||| ||||||||||   ||||||| ||||||||||| |||    
T  16242292 ttttgagacttttgtaaagttttctat--ttgagtctgtaattctagttttgccgaaacatagcaattttaggggggttttgaattaattcacgaagaaa 16242389  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||  |||||||||  ||||||||| || |||||| ||||||||    
T  16242390 tcatgcaaattggcaagtcaagaacatccgaagatttgtgaagact 16242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 20021921 - 20022039
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||||||||||||||| ||||||| |||| ||||  | |||||| ||||  |  ||||||||||||||||||||||| ||||||||    
T  20021921 ggacttttgtaatgttttctatatttgagtatgtaattatagttttcctaaaacatagcaattagagtgggtttttgaagtaattcacgaagaaatcatg 20022020  T
Q  104 tgaattggcaaagcaagaa 122  Q
      ||| |||||| ||||||    
T  20022021 caaatcggcaaatcaagaa 20022039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 19170250 - 19170382
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| |  | |||| |||||||  ||||||||||||||||||||||| ||||||||   ||    
T  19170250 tttgtaatgttttctatatttaagtttgtaattctagttttcc-tgaaaatagcaattttaaggggtttttgaagtaattcacgaaaaaatcatgcatat 19170348  T
Q  109 tggcaaagcaagaacattcggagatttatgaaga 142  Q
     | |||| ||||||||| || |||||| ||||||    
T  19170349 cgacaaatcaagaacatccgaagatttgtgaaga 19170382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34276536 - 34276664
Alignment:
Q  1 ttttgggacatttgtaatgttttctata-tttgagtctgtaattctagtcttccatacacatagtaatttta---gggtttttgaagtaattcacgaaca 96  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||||||| ||||  | ||| |  |||||||   ||||||||||||||||||||||| |    
T  34276536 ttttgggacttttgtaatattttctatattttgagtctgtaattctagttttcccaaaacacaacaattttaagggggtttttgaagtaattcacgaaaa 34276635  T
Q  97 aatcatgtgaattggcaaagcaagaacat 125  Q
    |||||||  ||| |||||| ||| |||||    
T  34276636 aatcatgcaaatcggcaaatcaataacat 34276664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 20886862 - 20886745
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt-agggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||  |||||||||||||||||||| |||||||| ||||||  | |||| | |||||| |||  |||||| |||||||||||| ||||||||    
T  20886862 gggacatttgttttgttttctatatttgagtctataattctattcttcccgaaacatggcaattttaaggcgttttgatgtaattcacgaagaaatcatg 20886763  T
Q  104 tgaattggcaaagcaaga 121  Q
      ||| ||||||||||||    
T  20886762 caaatcggcaaagcaaga 20886745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 28326237 - 28326354
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||| |||||||||| ||||||||||||  |||||| ||||||  | ||||||| |||||||||| |||||| |||||| ||||| ||||||||    
T  28326237 gggacatttggaatgttttctgtatttgagtctgcgattctattcttcccgaaacatagttattttagggtgttttgatgtaattgacgaagaaatcatg 28326336  T
Q  104 tgaattggcaaagcaaga 121  Q
      ||| ||||| ||||||    
T  28326337 caaatcggcaatgcaaga 28326354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16223489 - 16223370
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||| |||||||| ||||||||||||||||||||| |||||||  ||| ||||  | |||||| |||||||||  ||| |||| |||||||||||| |||    
T  16223489 ttttaggacatttataatgttttctatatttgagtatgtaattagagttttcccgaaacatagaaattttagggtgttcttgatgtaattcacgaagaaa 16223390  T
Q  99 tcatgtgaattggcaaagca 118  Q
    |||||  ||||| |||||||    
T  16223389 tcatggaaattgacaaagca 16223370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 13938949 - 13939071
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||| ||||||||| ||||||| ||||||| || |  | |||| | |||||||  ||||||||||||||||||||||| |||||||    
T  13938949 gggacttttgtaatgtttgctatatttgtgtctgtagttctagtttttccgaaacattgcaattttatggggtttttgaagtaattcacgaagaaatcat 13939048  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| || ||| |||||||||    
T  13939049 gcaaatcggaaaatcaagaacat 13939071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 5510062 - 5509945
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||||||||||| ||||   ||| ||||  | |||||| |||||||||  ||| |||| |||||||||||| ||||||||    
T  5510062 ggacatttgtaatgttttctatatttgagtctataatcagagttttcccgaaacatagcaattttaggatgttcttgatgtaattcacgaagaaatcatg 5509963  T
Q  104 tgaattggcaaagcaaga 121  Q
      ||| || |||||||||    
T  5509962 caaatcggaaaagcaaga 5509945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 12771311 - 12771401
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatc 100  Q
    |||||||||||||| |||||||||| |||||||||||| |||   | |||||| ||||||| |||||||||||||||| |||||| |||||    
T  12771311 tttgtaatgttttcgatatttgagtttgtaattctagttttctcgaaacatagcaattttaggggtttttgaagtaatccacgaagaaatc 12771401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 19170042 - 19169928
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatgtgaatt 109  Q
    |||||||||| || |||||||||||||||||||||||| ||||  | || ||  ||||| | ||| ||||||||||||||||||| ||||||||  |||     
T  19170042 tttgtaatgtcttatatatttgagtctgtaattctagttttcccgaaacgtaacaatttgagggggttttgaagtaattcacgaagaaatcatgcaaatc 19169943  T
Q  110 ggcaaagcaagaaca 124  Q
    |||||| ||||||||    
T  19169942 ggcaaatcaagaaca 19169928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 19909132 - 19909232
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||| ||||||||||||||| ||||||||||| |||| ||||    |||||| |||||||  ||||||||||| ||||||||||| |||||||    
T  19909132 gggacttttgttatgttttctatatttaagtctgtaattgtagttttcccggaacatagcaattttagggggtttttgaaataattcacgaagaaatcat 19909231  T
Q  103 g 103  Q
    |    
T  19909232 g 19909232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 8115395 - 8115528
Alignment:
Q  3 ttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||| || || | |||||| |         |||||||||||||||||||| |||||||    
T  8115395 ttgggacttttgtaatattttctatatttgagtatgtaattctagtttttcagaaacatagca--------ttttttgaagtaattcacgaagaaatcat 8115486  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |  ||| |||||| ||||||||| || | |||| ||||||||    
T  8115487 gcaaatcggcaaatcaagaacatccgaaaatttgtgaagact 8115528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 17135085 - 17134988
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    ||||||||||| |||||||||||||||||| |||||||||| | ||||  | |||||| ||||| |||  ||| |||| |||||||||||| ||||||    
T  17135085 ggacatttgtattgttttctatatttgagtatgtaattctattattcccgaaacatagcaatttaagggtgttcttgatgtaattcacgaagaaatca 17134988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 19573684 - 19573777
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||| |||||| |||||||| ||||||| |||| ||||  | |||||| ||||| ||||  |||||||||||||||||||| |||||||    
T  19573684 tttgtaatgctttctacatttgagtttgtaattttagttttcctgaaacatagcaatttgagggggtttttgaagtaattcacgaagaaatcat 19573777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 27412768 - 27412810
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27412768 tttgtaatgttttctatatttgagtctgtaattctagttttcc 27412810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 3429327 - 3429410
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaa 86  Q
    ||||||| ||||||| ||| ||||||||||||||||||| || ||||||  | |||||| ||||||||||  ||||||||||||    
T  3429327 gggacatctgtaatgatttttatatttgagtctgtaattttattcttcccgaaacatagaaattttaggggttttttgaagtaa 3429410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 18457214 - 18457352
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtt--tttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||  ||| || |||  ||||  | |||||  |||||||||| |  |||||||||||||||||| |||||||    
T  18457214 gggacttttgtaatgttttctatatttgagtaggtatttttagctttcccgaaacatac-aattttaggggtgttttgaagtaattcacgaagaaatcat 18457312  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    || |||  ||||| ||||||||| || ||| || ||||||    
T  18457313 gtaaatcagcaaatcaagaacatacgaagaattgtgaaga 18457352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19387949 - 19388052
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||| || |||| || ||||||||||||||||||||||||||||| ||||||  | |||||  |||||||  | ||| |||| |||||||||||| |||    
T  19387949 ttttgagatatttatattgttttctatatttgagtctgtaattctattcttcccaaaacatatcaattttatggtgttcttgatgtaattcacgaagaaa 19388048  T
Q  99 tcat 102  Q
    ||||    
T  19388049 tcat 19388052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 8770552 - 8770489
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg 74  Q
    ||||||||||||||||||||||||| |||||||||||| |||   | |||||| ||||||||||    
T  8770552 tttgtaatgttttctatatttgagtttgtaattctagttttcttgaaacatagcaattttaggg 8770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 20431465 - 20431366
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt-agggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||| |||||||| |||||||||||| ||||  | |||||  |||||| ||||| ||||||||||| ||| ||| ||||||||    
T  20431465 ggacttttgtaatgttttctaaatttgagtatgtaattctagttttcccgaaacataacaattttaagggtattttgaagtaactcatgaagaaatcatg 20431366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 22470507 - 22470545
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattct 45  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  22470507 gacatttgtaatgttttttatatttgagtctgtaattct 22470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 25851125 - 25851175
Alignment:
Q  75 tttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaacat 125  Q
    |||||||||||||||||||| ||||||||| ||| |||||| |||||||||    
T  25851125 tttttgaagtaattcacgaagaaatcatgtaaatcggcaaatcaagaacat 25851175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 18735373 - 18735473
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||| |||||||||||||| ||||||||||| || |||||     |||||| |||||||||  ||| |||| ||||||||| || |||||||    
T  18735373 gggacatttgtattgttttctatatttcagtctgtaattatattcttctcggaacatagcaattttaggttgttcttgatgtaattcacaaagaaatcat 18735472  T
Q  103 g 103  Q
    |    
T  18735473 g 18735473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 52935633 - 52935682
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttcca 54  Q
    ||||||||||||| |||| |||||||||||||||||||| |||| |||||    
T  52935633 gggacatttgtaacgtttgctatatttgagtctgtaattatagttttcca 52935682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 6075964 - 6075927
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaatt 43  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  6075964 ggacatttgtaatgttttccatatttgagtatgtaatt 6075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 18535764 - 18535723
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    |||||||||||| ||||||||||||| |||||| ||||||||    
T  18535764 gggacatttgtattgttttctatattcgagtctataattcta 18535723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22450446 - 22450414
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttga 33  Q
    ||||||||||||||| |||||||||||||||||    
T  22450446 ttttgggacatttgtgatgttttctatatttga 22450414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 21316781 - 21316636
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||||| ||||  | |||||| ||||||||||  |||||||||||||||||||| |||    
T  21316781 ttttgggacttatgtaatgttttctatatttgagtctataattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaa 21316682  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||  |||||||||| |||||||||| | ||| |||||||||||    
T  21316681 tcatggaaattggcaaatcaagaacatttgaagagttatgaagact 21316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 15176535 - 15176656
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||  | |||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  15176535 gggacttttgttatgttttctatatttgagtctgtaattctagttttcccaaaacatagcaattttaggggtttttgaagtaattcacgaagaaatcatg 15176634  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||| |||||| |||||||||    
T  15176635 caaatcggcaaatcaagaacat 15176656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 18570517 - 18570402
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||  | |||||| ||||| |  ||||||||||||||||||||||| ||||||||  |||    
T  18570517 tttgtaatgttttctatatttgagtctgtaattctagttttcccaaaacatagcaatttgagggggtttttgaagtaattcacgaagaaatcatgcaaat 18570418  T
Q  109 tggcaaagcaagaaca 124  Q
    |||||||  |||||||    
T  18570417 tggcaaataaagaaca 18570402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 17998247 - 17998109
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||| |||||||||||| |||| |||| || ||||| |||||||||||  ||||||||||||||||| || ||||||||    
T  17998247 ggacttttgtaatgttttctatattcgagtctgtaattttagttttccctaaacataataattttaggggttttttgaagtaattcacaaagaaatcatg 17998148  T
Q  104 tgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
      ||| |||||| ||||||||| || ||| || ||||||    
T  17998147 caaatcggcaaatcaagaacatccgaagaattgtgaaga 17998109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 24388471 - 24388596
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||  | |||||| ||||||||||  |||||||||||||||||||| |||    
T  24388471 ttttgggacttttgtaatgttttctatatttga-tctgtaattatagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaa 24388569  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  ||| |||||| |||||||||    
T  24388570 tcatgcaaatcggcaaatcaagaacat 24388596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21230923 - 21230780
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    |||||||| |||||||||||||| ||||||| ||| |||||||||||| ||||  | |||||| ||||||||||  |||||||||||||||||||| |||    
T  21230923 ttttgggatatttgtaatgttttttatattttagtttgtaattctagttttcctgaaacatagcaattttaggggttttttgaagtaattcacgaagaaa 21230824  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    |||||  ||| || ||| |||||||||  | |||||| ||||||    
T  21230823 tcatgcaaataggaaaatcaagaacatctgaagatttgtgaaga 21230780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 30832930 - 30832811
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag--ggtttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||||||||||||||||||| ||||||| |||||||||||| || |  | |||||| ||||||||  |||||||||||||||||||||| ||||||||      
T  30832930 acatttgtaatgttttctatgtttgagtttgtaattctagtttttccgaaacatagcaattttaggaggtttttgaagtaattcacgaagaaatcatgca 30832831  T
Q  106 aattggcaaagcaagaacat 125  Q
    ||| |||||| |||||||||    
T  30832830 aatcggcaaatcaagaacat 30832811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 30117761 - 30117879
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||| ||| ||| |||||||||||||||||| |||||||||| |||||| || |||||| |||||||||  ||| |||| |||||||||||| |||||||    
T  30117761 gggatattcgtattgttttctatatttgagtatgtaattctattcttccttaaacatagcaattttagggtgttcttgaggtaattcacgaagaaatcat 30117860  T
Q  103 gtgaattggcaaagcaaga 121  Q
    |  ||||||||||||||||    
T  30117861 gcaaattggcaaagcaaga 30117879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 19265816 - 19265716
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| |||||||    
T  19265816 gggacttttgtaatgttgtctatatttgaatctgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcat 19265717  T
Q  103 g 103  Q
    |    
T  19265716 g 19265716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 28621598 - 28621477
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||   | |||||| ||||||| |||||||||||| |||||||||| ||||||||    
T  28621598 gggacttttttaatgttttctatatttgagtctgtaattctagttttcttgaaacatagcaattttaggggtttttgaagaaattcacgaagaaatcatg 28621499  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      |||  ||||| |||||||||    
T  28621498 caaatccgcaaatcaagaacat 28621477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 24090988 - 24091092
Alignment:
Q  12 ttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatgtgaattg 110  Q
    ||||||||||||||||||||||||||||||||||||| |||   | |||||| ||||||| |||  |||||||||||||||||| ||||||||  |||||    
T  24090988 ttgtaatgttttctatatttgagtctgtaattctagttttctcaaaacatagcaattttaggggggtttgaagtaattcacgaagaaatcatgcaaattg 24091087  T
Q  111 gcaaa 115  Q
    |||||    
T  24091088 gcaaa 24091092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 24583274 - 24583393
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||| | |||||||||||  ||||  | |||||| |||||||  ||||||||||||||||||||||| |||||||    
T  24583274 gggacttttgtaatgttttctatatttgaatttgtaattctaggtttcctaaaacatagcaattttagggggtttttgaagtaattcacgaaaaaatcat 24583373  T
Q  103 gtgaattggcaaagcaagaa 122  Q
    |  ||| |||||| ||||||    
T  24583374 gcaaatcggcaaatcaagaa 24583393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 26139776 - 26139661
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||  | |||||| ||||| ||||  |||||||||||||||||||| ||||||||  |||    
T  26139776 tttgtaatgttttctatatttgagtttgtaattcaagttttcccaaaacatagcaatttaagggggtttttgaagtaattcacgaagaaatcatgcaaat 26139677  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  26139676 cggcaaatcaagaaca 26139661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14271839 - 14271717
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||||||||||||| ||||||||||||||||||| ||||||   ||| ||||  | |||||| |||||||||  ||| |||| |||||||||||| |||    
T  14271839 ttttgggacatttgtgatgttttctatatttgagtatgtaatcagagttttcccgaaacatagaaattttagggtgttcttgatgtaattcacgaagaaa 14271740  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    |||||  ||||||||||||||||    
T  14271739 tcatgcaaattggcaaagcaaga 14271717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 20400328 - 20400230
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatca 101  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||| ||||  | |||||| |||||||  ||||||||||||||||||||||| ||||||    
T  20400328 gggacttttgtaatgttttctatatttgagtttgtaattatagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatca 20400230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29765491 - 29765636
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaa 98  Q
    |||||| || ||| |||| |||||||||||||||||| |||||||||| |||  || | |||| ||||||||||   ||||||||||||||||||| |||    
T  29765491 ttttggtacctttttaatattttctatatttgagtctctaattctagttttctctaaagatagcaattttagggggattttgaagtaattcacgaagaaa 29765590  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||  ||| |||||| ||||||||| || | |||| ||||||||    
T  29765591 tcatgcaaatcggcaaatcaagaacatccgaatatttgtgaagact 29765636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19784879 - 19784983
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||||| |||||||||||||||||||||||||| |||||||||  ||||||  | | |||| |||||||||  |||||||| |||||||||||| |||    
T  19784879 ttttgggatatttgtaatgttttctatatttgagtatgtaattctgttcttcctgaaatatagcaattttagggtgtttttgatgtaattcacgaagaaa 19784978  T
Q  99 tcatg 103  Q
    |||||    
T  19784979 tcatg 19784983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 24109137 - 24109237
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||    |||||| |||||||  |||||||||||||||||||| || |||||||    
T  24109137 gggacttttgaaatgttttctatatttgagtctgtaattctagttttcccagaacatagcaattttagggggtttttgaagtaattcacaaagaaatcat 24109236  T
Q  103 g 103  Q
    |    
T  24109237 g 24109237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 24381435 - 24381547
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||| ||||||||||||||||||||||||||||| | ||||    |||||| |||||||||  |||||||| |||||||||||| ||||||||  |||    
T  24381435 tttgtattgttttctatatttgagtctgtaattctattattcccgtaacatagcaattttagggtgtttttgatgtaattcacgaagaaatcatgcaaat 24381534  T
Q  109 tggcaaagcaaga 121  Q
     ||||||||||||    
T  24381535 cggcaaagcaaga 24381547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 25481614 - 25481709
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta---gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | |||||  ||||| |   ||| ||||||||||||||||||| ||||||||    
T  25481614 tttgtaatgttttctatatttgagtctgtaattctagttttccagaaacatatcaatttgagggggggttttgaagtaattcacgaagaaatcatg 25481709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2638718 - 2638616
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||  | |||||| |||||||||  ||| || |||||||||||||| |||    
T  2638718 ttttgggacatttgtaatgttttctatatttaagtatgtaatactattcttcccgaaacatagcaattttagggtgttcttaaagtaattcacgaagaaa 2638619  T
Q  99 tca 101  Q
    |||    
T  2638618 tca 2638616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14077120 - 14077017
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||| ||||||  | |||||| ||||||| ||| |||||| |||||||| ||| ||||    
T  14077120 ttttgggacatttgtaatattttctatatttgagtatgttattctattcttcctaaaacatagcaattttatggtgttttgatgtaattcatgaagaaat 14077021  T
Q  100 catg 103  Q
    ||||    
T  14077020 catg 14077017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17980791 - 17980669
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| |||||   | |||||| |||| ||||  |||||||| |||||||||||| |||    
T  17980791 ttttgggacatttgcaatgttttctatatttgagtttgtagttctattcttcacgaaacatagcaattctaggatgtttttgatgtaattcacgaaaaaa 17980692  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    |||||  ||| |||||| |||||    
T  17980691 tcatgcaaatcggcaaatcaaga 17980669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24389754 - 24389628
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    ||||||||  ||||||| ||||||||||||||||| |||| ||  ||| ||||  | |||||| | ||||||||  |||||||||||||||||||| |||    
T  24389754 ttttgggaattttgtaaagttttctatatttgagtttgtacttagagttttcccgaaacatagcatttttaggggttttttgaagtaattcacgaagaaa 24389655  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  |||||||||| |||||||||    
T  24389654 tcatgcaaattggcaaatcaagaacat 24389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26888484 - 26888358
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt--agggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||| | || ||||  | |||||| ||||||  ||||||||| |||||||||| ||| |||    
T  26888484 ttttgggacttttgtaatggtttttatatttgagtctgtaattatggttttcccgaaacatagcaattttagagggtttttcaagtaattcatgaagaaa 26888385  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||| |||  ||||| |||||||||    
T  26888384 tcatgtaaatcagcaaatcaagaacat 26888358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 28904070 - 28904188
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||||||||||||||| ||||||| || | ||||  | |||||| |||| || | | |||||| ||||||||||||||||||||    
T  28904070 gggacatttgtaatgttttctatatttgagtcatgtaattatatttttcctgaaacatagcaattatatgatgttttgatgtaattcacgaacaaatcat 28904169  T
Q  103 gtgaattggcaaagcaaga 121  Q
    |  ||| ||||||||||||    
T  28904170 gcaaatcggcaaagcaaga 28904188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 15557383 - 15557292
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaa 94  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| ||||||  |  ||||||||||||||||| |||||| ||||||||||||    
T  15557383 gggacatttgtaaggttttctatgtttgagtcatgtaattctattcttcccgaaccatagtaattttagggtgttttgatgtaattcacgaa 15557292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 19791387 - 19791289
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt--tagggtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||| |||| |||||||||||||||||||  | ||||||  | |||||| |||||  ||||||| ||||||||||||||||| ||||||    
T  19791387 gggacatttgtaatattttttatatttgagtctgtaatttgattcttcctaaaacatagcaattttatagggttcttgaagtaattcacgaagaaatca 19791289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 24851050 - 24851165
Alignment:
Q  8 acatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtg 105  Q
    ||||||||||||||||||| ||||||||| | |||||||| ||||||  | |||||| ||||||||| | |||||| ||||||||| || ||||||||      
T  24851050 acatttgtaatgttttctacatttgagtcatataattctattcttcccaaaacatagcaattttaggatgttttgatgtaattcacaaataaatcatgca 24851149  T
Q  106 aattggcaaagcaaga 121  Q
    ||| ||||||||||||    
T  24851150 aatcggcaaagcaaga 24851165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 24380459 - 24380556
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||  | |||||| |||||||||  ||| |||| |||||||| ||| ||||||||    
T  24380459 acatttctattgttttctatatttgagtctgtaattctattcttcccaaaacatagcaattttagggtgttcttgatgtaattcatgaataaatcatg 24380556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 26829569 - 26829689
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||| |||||||||||||| | |||||||||||| |||   | |||||| ||||| |  ||| ||||||| ||||||||||| |||||||    
T  26829569 gggacttttgtaatattttctatatttgattatgtaattctagttttctcgaaacatagcaatttgaggggggttttgaaataattcacgaagaaatcat 26829668  T
Q  103 gtgaattggcaaagcaagaac 123  Q
    |  ||| ||||||||||||||    
T  26829669 gcaaatcggcaaagcaagaac 26829689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37527129 - 37527177
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  37527129 gggacatttgtaatgttttctatatttgagtctataattctattcttcc 37527177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4007250 - 4007352
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||| ||| |||||| |||||||||||||| |||||||||||||| ||||||  | |||||| |||||||||  ||| |||| | |||||||||| |||    
T  4007250 ttttgagacgtttgtattgttttctatatttaagtctgtaattctattcttcccgaaacatagcaattttagggtgttcttgatgaaattcacgaagaaa 4007349  T
Q  99 tca 101  Q
    |||    
T  4007350 tca 4007352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 22501823 - 22501694
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    |||||||||| ||||||||||||||||||||||   ||| ||||  | |||||  |||||||||  ||| |||| |||||||||||| ||||||||  ||    
T  22501823 atttgtaatgctttctatatttgagtctgtaatcagagttttcccgaaacataacaattttagggtgttcttgatgtaattcacgaataaatcatgcaaa 22501724  T
Q  108 ttggcaaagcaagaacattcggagatttatg 138  Q
    | ||||||||||| |||| || |||||||||    
T  22501723 tcggcaaagcaag-acatccgaagatttatg 22501694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 23867932 - 23868054
Alignment:
Q  5 gggacatttgtaatgttttct-atatttgagtctgtaattctagtcttccatacacatagtaattttagg-gtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||| | |||||||||| ||| |||||||| ||||  | | |||||||| ||| | ||||||||||||||||||||| |||||||    
T  23867932 gggacttttgtaatgtttttttatatttgagtttgtcattctagttttcccaaaatatagtaatcttaagagtttttgaagtaattcacgaagaaatcat 23868031  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  |||  ||||| |||||||||    
T  23868032 gcaaatcagcaaatcaagaacat 23868054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 5856773 - 5856732
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  5856773 gggacatttgtaatgttttctacatttgagtctgtaattcta 5856732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 6886662 - 6886625
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6886662 gggacatttgtaatgttttctatatttgagtctgtaat 6886625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 7985105 - 7985013
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||| |||||||| ||| |||||||||| |||||   | |||||| |||||||||  ||| ||||||||||||||||| ||||||    
T  7985105 tttgtaatgtttactatattttagtatgtaattctattcttctcgaaacatagcaattttagggtgttcttgaagtaattcacgaagaaatca 7985013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 15058607 - 15058724
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||  ||||||||||||||||||||||| |||||||| | ||||  | |||||| ||||||||| | |||||  |||||||| ||| ||||||||    
T  15058607 gggacattgttaatgttttctatatttgagtctttaattctattattcccaaaacatagcaattttaggatattttgttgtaattcatgaagaaatcatg 15058706  T
Q  104 tgaattggcaaagcaaga 121  Q
    |  ||  |||||||||||    
T  15058707 tatatcagcaaagcaaga 15058724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24091814 - 24091714
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||| ||||||| |||||||||||||| |||||| |||||||||| ||||||  | ||| || |||||||||  ||| ||||| ||||||||||| |||    
T  24091814 ttttgcgacatttttaatgttttctataattgagtatgtaattctattcttcccgaaacaaagcaattttagggtgttcttgaactaattcacgaagaaa 24091715  T
Q  99 t 99  Q
    |    
T  24091714 t 24091714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34499233 - 34499181
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||| || |||||||||||||||||||||||||||| ||||| |||||||||    
T  34499233 ttttgagaaatttgtaatgttttctatatttgagtctataattatagtcttcc 34499181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 17835537 - 17835438
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||  |||||||||||| ||| ||||||| || ||||||  | |||||| ||||||||| | |||||  |||||||||||| ||||||||    
T  17835537 gggacatttgtaacattttctatatttaagtttgtaattatattcttcctgaaacatagaaattttaggatgttttgttgtaattcacgaaaaaatcatg 17835438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 18822515 - 18822444
Alignment:
Q  73 ggtttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||||||||||||||||||| ||||||||  |||||| ||| ||||||||| |  |||||| ||||||||    
T  18822515 ggtttttgaagtaattcacgaagaaatcatgcaaattggaaaatcaagaacatccaaagatttgtgaagact 18822444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 24908895 - 24908832
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta 71  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||  | |||||| |||||||    
T  24908895 acatttgtaatgttttctatatttgagtttgtaattctattattcccaaaacatagcaatttta 24908832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 24911116 - 24911053
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta 71  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||  | |||||| |||||||    
T  24911116 acatttgtaatgttttctatatttgagtttgtaattctattattcccaaaacatagcaatttta 24911053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 17100319 - 17100357
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  17100319 taatgttttctatatttgagtctgtaattctagttttcc 17100357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 6286279 - 6286238
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  6286279 gggacatttgtaatcttttttatatttgagtctgtaattcta 6286238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 24520120 - 24520225
Alignment:
Q  20 ttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggcaaagc 117  Q
    ||||||||||||||||  ||| ||||||| |||   | |||||| ||||||||||  |||||||||||||||||||| || |||||  ||| |||||| |    
T  24520120 ttttctatatttgagt--gtatttctagttttctcgaaacatagcaattttagggggtttttgaagtaattcacgaataagtcatgcaaatcggcaaatc 24520217  T
Q  118 aagaacat 125  Q
    ||||||||    
T  24520218 aagaacat 24520225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 28275425 - 28275462
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  28275425 gggacatttgtaatgttttctatatttgagtatgtaat 28275462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 18446968 - 18447086
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaa--ttctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtga 106  Q
    ||||||||||||||||| ||||||||| |||  ||||||| || |  | |||||| |||||||  |||| |||||| ||| ||| ||| ||||||||  |    
T  18446968 tttgtaatgttttctatgtttgagtctataattttctagttttaccgaaacatagcaattttagggggtatttgaaataagtcaagaagaaatcatgcaa 18447067  T
Q  107 attggcaaagcaagaacat 125  Q
    ||||||||| |||||||||    
T  18447068 attggcaaatcaagaacat 18447086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 24518695 - 24518789
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||| | ||||||||| || ||||||  | |||||  ||||||| ||| |||| | ||||||||| || ||||||||    
T  24518695 atttgtaatgttttctatatttaattctgtaattatattcttcctgaaacataacaattttaaggtgttttcatgtaattcacaaagaaatcatg 24518789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12342988 - 12343091
Alignment:
Q  1 ttttgggacatttgtaatg-ttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaa 97  Q
    ||||||||||||||| ||| |||| ||||||||| ||||| |||||| |||||   | |||||  |||||||||  ||| |||| |||||||||||| ||    
T  12342988 ttttgggacatttgttatgtttttttatatttgaatctgtgattctattcttctcaaaacataacaattttagggtgttcttgatgtaattcacgaagaa 12343087  T
Q  98 atca 101  Q
    ||||    
T  12343088 atca 12343091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 13313374 - 13313410
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaa 41  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  13313374 gggacttttgtaatgttttctatatttgagtttgtaa 13313410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 21932472 - 21932326
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaa 97  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||| |||    |||| ||||||||| |||| ||    
T  21932472 ttttaggacatttgtaatgttttctatatttgagtctgtaattctagtcttcccgaaacatagcaattttcgggggagttttaaagtaattcgcgaagaa 21932373  T
Q  98 atcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    ||||||  |||||||||||||||||||| |  |||||| ||||||||    
T  21932372 atcatgcaaattggcaaagcaagaacatccaaagatttgtgaagact 21932326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 8038155 - 8038285
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgt 104  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||  | |||||| |||||||||  ||||||||||||||| ||||| ||||||||     
T  8038155 gacatttataatgttttctatatttgagtctgcaattctagtcttcccaaaacatagcaattttagggtgtttttgaagtaatttacgaagaaatcatgc 8038254  T
Q  105 gaattggcaaagcaagaacattcggagattt 135  Q
     ||| |||||||||| ||||| || ||||||    
T  8038255 aaatcggcaaagcaaaaacatccgaagattt 8038285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 14723678 - 14723557
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || |  | |||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  14723678 gggacttttgtaatgttttctatatttgagtctgtaattctagtttttctgaaacatagcaattttaggggtttttgaagtaattcacgaagaaatcatg 14723579  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      |||  ||||| |||||||||    
T  14723578 caaatcagcaaatcaagaacat 14723557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17822123 - 17822250
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt---tagggtttttgaagtaattcacgaacaa 97  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||  | |||||| | |||   ||||||||||||||||||||||||| ||    
T  17822123 ttttgggacttttgtaatgttttctaaatttgagtatgtaattctagtcttcccgaaacatagcagttttaatagggtttttgaagtaattcacgaagaa 17822222  T
Q  98 atcatgtgaattggcaaagcaagaacat 125  Q
    ||||||  ||| |||||| |||||||||    
T  17822223 atcatgcaaatcggcaaatcaagaacat 17822250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 9841015 - 9840888
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||  | |||||| |||||||||  |||||| |||||||||||||| |||||| |  ||    
T  9841015 atttgtaatattttctatatttgactctataattctagtcttcccaaaacatagcaattttagggtgtttttaaagtaattcacgaagaaatcaagcaaa 9840916  T
Q  108 ttggcaaagcaagaacattcggagattt 135  Q
    | |||||||||| |||||||| ||||||    
T  9840915 tcggcaaagcaataacattcgaagattt 9840888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 2588288 - 2588159
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgt 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  | |||| | |||| | ||  |||||||| |||||||||||| ||||| ||     
T  2588288 gacatttgtaatgttttctatatttgagtctgtaattctattcttcccaaaacatggcaattcttgggtgtttttgatgtaattcacgaagaaatcgtga 2588189  T
Q  105 gaattggcaaagcaagaacattcggagatt 134  Q
     ||| |||||||||||||||| || |||||    
T  2588188 taatcggcaaagcaagaacatccgaagatt 2588159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 14076389 - 14076268
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||||||||||||||||  |||||||| | ||||  | |||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  14076389 ggacttttgtaatgttttctatatttgagtccctaattctatttttcccgaaacatagcaattttaggtagtttttgaagtaattcacgaagaaatcatg 14076290  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||||| |||| |||||||||    
T  14076289 caaattgacaaatcaagaacat 14076268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 19594081 - 19594202
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||  | |||||  |||||||||  | ||||||||||||||||||| ||||||||    
T  19594081 ggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacataacaattttagggaggttttgaagtaattcacgaagaaatcatg 19594180  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||| || ||| |||||||||    
T  19594181 caaatcggaaaatcaagaacat 19594202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1636632 - 1636528
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    |||||||| ||||||||||||||| |||||||||||| ||| |||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| |||    
T  1636632 ttttgggatatttgtaatgttttccatatttgagtctataactctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaa 1636533  T
Q  99 tcatg 103  Q
    |||||    
T  1636532 tcatg 1636528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 19577636 - 19577761
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg-tttttgaagtaattcacgaacaaat 99  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||  |||||||  ||||||||||   ||||||||||||||| || ||||    
T  19577636 tttttggacttttgtaaggttttctatatttgagtctgtaattctagttttcccgacacataacaattttagggaggtttgaagtaattcacaaagaaat 19577735  T
Q  100 catgtgaattggcaaagcaagaacat 125  Q
    ||||  ||| |||||| |||||||||    
T  19577736 catgcaaatcggcaaatcaagaacat 19577761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 8066640 - 8066505
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||  | ||||||||||||||  ||| ||||||||||||||| ||| ||||||||  |||    
T  8066640 tttgtaatattttctatatttgagtctgtaattcaagttttcctgaaacatagtaattttacgggggttttgaagtaattcaagaagaaatcatgcaaat 8066541  T
Q  109 tggcaaagcaagaacattcggagatttatgaagact 144  Q
     | |||  ||||||||| || |||||| ||||||||    
T  8066540 cgacaagtcaagaacatccgaagatttgtgaagact 8066505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 9339081 - 9339179
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| |  | |||||| ||||||||||| |||||| |||||||| ||| |||||||    
T  9339081 gggacatttgtaatgttttctatatttgagtttgtaattctattctttccgaaacatagcaattttagggtattttgatgtaattcatgaagaaatcat 9339179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 22411513 - 22411646
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||||||||| |||||||||||| || ||||||| ||||  | |||||| ||||| |||  ||||||||||||||||||||| ||||||||  |||    
T  22411513 tttgtaatgttttccatatttgagtctctatttctagttttcccaaaacatagcaatttgaggaggtttttgaagtaattcacgaagaaatcatgcaaat 22411612  T
Q  109 tggcaaagcaagaacattcggagatttatgaaga 142  Q
     |||||| ||||||||| || ||| ||| |||||    
T  22411613 cggcaaatcaagaacatccgaagaattacgaaga 22411646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21079820 - 21079941
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| | || |  | |||||| ||||||| ||| |||||| |||||||| ||| ||||    
T  21079820 tttttggacatttgcaatgttttctatatttgagtctgtaattctattatttccgatacatagaaattttatggtgttttgatgtaattcaagaagaaat 21079919  T
Q  100 catgtgaattggcaaagcaaga 121  Q
    ||||  ||| ||||||||||||    
T  21079920 catgcaaatcggcaaagcaaga 21079941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 22564652 - 22564752
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||   | |||||| |||||||||  ||| |||| |||||||||||| |||||||    
T  22564652 gggacatttgtaatgttttctatatttgagtctgtaattctgttcttctcgaaacatagcaattttagggtgttgttgatgtaattcacgaagaaatcat 22564751  T
Q  103 g 103  Q
    |    
T  22564752 g 22564752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 23644420 - 23644520
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||  | |||||| || ||||||  |||||||| |||||||||||| |||||||    
T  23644420 gggacatttgtaatgttttctatatttgagtctgtatttctgttcttcctaaaacatagcaaatttaggatgtttttgatgtaattcacgaagaaatcat 23644519  T
Q  103 g 103  Q
    |    
T  23644520 g 23644520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21060503 - 21060624
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    |||| |||||||| ||||||||||||||||||||| | |||||||| | || |  | |||||| ||||||| ||| |||||| |||||||| ||| ||||    
T  21060503 tttttggacatttttaatgttttctatatttgagtttataattctattatttctgatacatagcaattttacggtgttttgatgtaattcaagaagaaat 21060602  T
Q  100 catgtgaattggcaaagcaaga 121  Q
    ||||| |||||| |||||||||    
T  21060603 catgtaaattgggaaagcaaga 21060624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 24469792 - 24469692
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||| |||||||||| ||||||||||||| |||| ||||  | |||||  |||||||||  ||||||||||||||||||||| |||||||    
T  24469792 gggacttttgtaatattttctatatatgagtctgtaattatagttttcccgaaacataacaattttagggagtttttgaagtaattcacgaagaaatcat 24469693  T
Q  103 g 103  Q
    |    
T  24469692 g 24469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 9507373 - 9507472
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||| |||||||||||||||| |||||||||| | ||||  | |||||| |||| ||||  |||||||| |||||||||||| |||||||    
T  9507373 gggacatttgtaatattttctatatttgagtatgtaattctattattcccgagacatagcaattatagggtgtttttgatgtaattcacgaagaaatcat 9507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 20080732 - 20080613
Alignment:
Q  4 tgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatca 101  Q
    |||||||||| || ||| || |||||||||||||||||||||| ||||||  | |||||| ||||||||||  || |||| ||||||||| || ||||||    
T  20080732 tgggacatttatattgtattttatatttgagtctgtaattctattcttcccgaaacatagaaattttagggtcttcttgatgtaattcacaaagaaatca 20080633  T
Q  102 tgtgaattggcaaagcaaga 121  Q
    ||| ||| || |||||||||    
T  20080632 tgtaaatcggaaaagcaaga 20080613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 21760520 - 21760631
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaattggc 112  Q
    ||||||||||||||||||||| |||||||||||| |||   | |||||| |||||||  ||| ||||||||||||||||||| ||||||||  ||| ||     
T  21760520 taatgttttctatatttgagtttgtaattctagttttcgcgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatcggt 21760619  T
Q  113 aaagcaagaaca 124  Q
    ||| ||||||||    
T  21760620 aaatcaagaaca 21760631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 23005349 - 23005468
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||| |||||||||| |||||||||||| ||||  | ||| || ||||| |  ||| ||||||||| ||||||||| |||||||    
T  23005349 gggacatttgtaatgttttccatatttgagtatgtaattctagttttcccaaaacaaagcaatttgagggggattttgaagttattcacgaagaaatcat 23005448  T
Q  103 gtgaattggcaaagcaagaa 122  Q
    |  ||| |||||| ||||||    
T  23005449 gcaaatcggcaaatcaagaa 23005468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 23783017 - 23782898
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||| |||||||||| |||||||||||| ||||  | ||| || ||||| |  ||| ||||||||| ||||||||| |||||||    
T  23783017 gggacatttgtaatgttttccatatttgagtatgtaattctagttttcccaaaacaaagcaatttgagggggattttgaagttattcacgaagaaatcat 23782918  T
Q  103 gtgaattggcaaagcaagaa 122  Q
    |  ||| |||||| ||||||    
T  23782917 gcaaatcggcaaatcaagaa 23782898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8246611 - 8246536
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtt 76  Q
    ||||||||||||| || |||||||||||||||||||||||||| || ||||||  | |||||| ||||||||||||    
T  8246611 ttttgggacatttttattgttttctatatttgagtctgtaattatattcttcccgaaacatagcaattttagggtt 8246536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 21152600 - 21152717
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||  | |||||  |||||| |||   ||||||||||||||| |||| ||||||||  ||    
T  21152600 tttgtaatgttttctatatttgaatctgtaattccagttttcccgaaacatataaattttcggggtttttttgaagtaattctcgaagaaatcatgcaaa 21152699  T
Q  108 ttggcaaagcaagaacat 125  Q
    | |||||| |||||||||    
T  21152700 tcggcaaatcaagaacat 21152717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 24480012 - 24479918
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||||||||| ||||||||||||| |||| |||   | |||||  |||||||  ||||||||||||||||||||||| ||||||||    
T  24480012 tttgtaatgttttctatatgtgagtctgtaattatagttttctcgaaacataacaattttagggggtttttgaagtaattcacgaaaaaatcatg 24479918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 9897973 - 9898069
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||| |||||||||||||||||||||||||| || |||||   | |||||| |||||||||  ||| |||| |||||||||||| |||||||    
T  9897973 acatttgtattgttttctatatttgagtctgtaattgtattcttcttgaaacatagcaattttagggtgttcttgatgtaattcacgaagaaatcat 9898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 6629082 - 6629146
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtctt-ccatacacatagtaattttagg 73  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| | |||||| |||||||||    
T  6629082 atttgtaatgttttctatatttgagtctgtaattctattcttcccaaaaacatagaaattttagg 6629146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 9848151 - 9848036
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag--ggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||   | |||||| ||||||||    |||||||||||||||||||| ||||||||   ||    
T  9848151 tttgtaatgttttctatatttgaatctataattctggtcttctcaaaacatagcaattttagaatctttttgaagtaattcacgaaaaaatcatgcatat 9848052  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||||||| ||||    
T  9848051 cggcaaagcaataaca 9848036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 22404357 - 22404497
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||| |||||||||||||||||||| |||| ||||||||| || ||||  | |||||  ||||||| ||| |||| |||||||||| ||| ||||||||    
T  22404357 gggacttttgtaatgttttctatattcgagtatgtaattctggttttcctgaaacataccaattttagggggtttttaagtaattcatgaagaaatcatg 22404456  T
Q  104 tgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
      |||  ||||| ||||||||| |  |||||| ||||||||    
T  22404457 caaatcagcaaatcaagaacatccaaagatttgtgaagact 22404497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9519730 - 9519604
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||| ||||  | | |  | |||||||||  ||||||||| ||||||||| | |||    
T  9519730 ttttggggcttttgtaatgtgttctatatttgagtctgtaattctagttttcccgaaataacgcaattttagggtgtttttgaaataattcacggagaaa 9519631  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  |||  ||||| |||||||||    
T  9519630 tcatgcaaatcagcaaatcaagaacat 9519604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27961212 - 27961090
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaa 98  Q
    ||||||||| |||| ||||| |||||||||||| || |||||||| | ||||||  | |||||| |||| |||||| |||||| |||||||||||| |||    
T  27961212 ttttgggacgtttgaaatgtattctatatttgattcatgtaattccattcttcccgaaacatagcaattctagggtgttttgatgtaattcacgaagaaa 27961113  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    |||||  ||| ||||||| ||||    
T  27961112 tcatgcaaatcggcaaagaaaga 27961090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 31878957 - 31879003
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtctt 51  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  31878957 gggacatttgtaatgttttctatatttgagtttgtaattctattctt 31879003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 17383731 - 17383630
Alignment:
Q  25 tatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaac 123  Q
    ||||||||| | |||||||||||| ||||  | |||||| ||||||||||  |||||||||||||| |||| ||||||||  |||||| ||| |||||||    
T  17383731 tatatttgattatgtaattctagttttcccaaaacatagcaattttagggggttttgaagtaattcgcgaagaaatcatgcaaattggaaaatcaagaac 17383632  T
Q  124 at 125  Q
    ||    
T  17383631 at 17383630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 18171356 - 18171404
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  18171356 gggacttttgtaatgttttctatatttgagtctgtaattgtagttttcc 18171404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 20004289 - 20004404
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||| |||| |||||||||||||||||||||||| || |  | ||  |  |||||||||  |||||||||| |||||||||| ||||||||  |||    
T  20004289 tttgtaatattttttatatttgagtctgtaattctagtttttccgaaacgcaacaattttagggagtttttgaagaaattcacgaagaaatcatgcaaat 20004388  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  20004389 cggcaaatcaagaaca 20004404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32759967 - 32759863
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaa 98  Q
    ||||| ||||| |||||||||||||| ||||||||| |||||||||| | ||||  | |||||| |||| |||| | |||||| |||||||||||| |||    
T  32759967 ttttgagacatgtgtaatgttttctaaatttgagtcatgtaattctacttttcccaaaacatagcaattctaggatgttttgatgtaattcacgaagaaa 32759868  T
Q  99 tcatg 103  Q
    |||||    
T  32759867 tcatg 32759863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 3358137 - 3358098
Alignment:
Q  4 tgggacatttgtaatgttttctatatttgagtctgtaatt 43  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  3358137 tgggacatttgaaatgttttctatatttgagtctgtaatt 3358098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14641630 - 14641545
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt--tagggtttttgaagt 84  Q
    |||||| || |||||||||||||||||| |||||||||||||||| || |||   | |||||| |||||  |||||||||||||||    
T  14641630 ttttggaacttttgtaatgttttctataattgagtctgtaattctggttttctcgaaacatagcaattttatagggtttttgaagt 14641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19246274 - 19246232
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaatt 43  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  19246274 ttttgggacatttgtattattttctatatttgagtctgtaatt 19246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21687228 - 21687302
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    |||||||||||||||| |||||||||||| ||||| || ||||||| ||||| | | | |||| |||||||||||    
T  21687228 ttttgggacatttgtattgttttctatatatgagtatgcaattctattcttctagaaatatagaaattttagggt 21687302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 26820875 - 26820738
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||| |||||||||||||||||||||| ||||| ||||||||| |||   | |||||  ||||||||  ||||| || ||||||| | | ||||||||      
T  26820875 ggacttttgtaatgttttctatatttgggtctgaaattctagttttcttgaaacataacaattttagaatttttaaaataattcatgtagaaatcatgca 26820776  T
Q  106 aattggcaaagcaagaacattcggagatttatgaagac 143  Q
    ||| || ||| ||||| |||||  |||||| |||||||    
T  26820775 aatcggtaaatcaagagcattcaaagatttgtgaagac 26820738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 14078031 - 14077988
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagt 48  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||    
T  14078031 gggacttttgtaatgttttttatatttgagtctctaattctagt 14077988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22845950 - 22845997
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagt 48  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| ||||    
T  22845950 ttttgggagttttgtaatgttttctatatttgagtatgtaattatagt 22845997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 24389250 - 24389368
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||| || |||||||||||||||| ||| |||||||| |||||   | |||||| ||||||||||  || |||| ||||||||  || |||||||    
T  24389250 gggacatttatattgttttctatatttgactctctaattctattcttctgaaaacatagaaattttagggtcttcttgatgtaattcataaagaaatcat 24389349  T
Q  103 gtgaattggcaaagcaaga 121  Q
    || ||| |  |||||||||    
T  24389350 gtaaatcgaaaaagcaaga 24389368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 11136906 - 11136876
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaa 41  Q
    |||||||||||||||||||||||||||||||    
T  11136906 tttgtaatgttttctatatttgagtctgtaa 11136876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14727133 - 14727091
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaatt 43  Q
    |||||| |||||| || ||||||||||||||||||||||||||    
T  14727133 ttttggaacatttatattgttttctatatttgagtctgtaatt 14727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 22569846 - 22569800
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||    
T  22569846 gacatttttaatgttttctatatttgattatgtaattctattcttcc 22569800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 30356257 - 30356139
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||| ||||||||| ||||| |||||| |||||||||| | ||||  | |||||  |||| |||| | |||||| |||||||||| | |||||||    
T  30356257 gggacatttataatgttttatatatatgagtcatgtaattctattattcccgaaacatatcaattctaggatgttttgatgtaattcacggagaaatcat 30356158  T
Q  103 gtgaattggcaaagcaaga 121  Q
    |  ||| ||||||||||||    
T  30356157 gcaaatcggcaaagcaaga 30356139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 16167807 - 16167696
Alignment:
Q  9 catttgtaatgttttctatatttgagtc-tgtaattctagtctt-ccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtg 105  Q
    ||||||||| |||||||||||||||||| |||||||||| | || ||||| ||||||||||| |||||| |||||| |||||||   || |||||||||     
T  16167807 catttgtaa-gttttctatatttgagtcatgtaattctaattttcccata-acatagtaattatagggtgttttgatgtaattcttaaagaaatcatgtt 16167710  T
Q  106 aattggcaaagcaa 119  Q
    ||  ||||||||||    
T  16167709 aaggggcaaagcaa 16167696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 17379568 - 17379621
Alignment:
Q  21 tttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg 74  Q
    ||||||||||||||||||||||||| || ||||  | |||||| ||||||||||    
T  17379568 tttctatatttgagtctgtaattctggttttcccaaaacatagcaattttaggg 17379621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17847778 - 17847733
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    |||||||| |||||||||||| |||||||| |||||||| ||||||    
T  17847778 ttttgggatatttgtaatgttctctatattagagtctgtgattcta 17847733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 22426618 - 22426757
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||  |||||||| ||||||||||| |||||||    
T  22426618 gggacttttgtaatgttttctatatttgagtctgtaattctagtcttcctgaaacatagcaattttaggggttttttgaaataattcacgaagaaatcat 22426717  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    |  ||| || ||| ||||||||| || ||| || ||||||    
T  22426718 gcaaatcggaaaatcaagaacatccgaagaattgtgaaga 22426757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 26022389 - 26022267
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  | |||||| |||||||   |||||||||||||||||||| | |||||||    
T  26022389 gggacatttgtaatgttttctatatttgagtctttaattctagtcttcctgaaacatagcaattttaagaggtttttgaagtaattcacggagaaatcat 26022290  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| |||||||||    
T  26022289 gcaaatcggcaaatcaagaacat 26022267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 12011290 - 12011426
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtga 106  Q
    ||||||| ||||||||| |||||||||||| ||| ||||||||||| || ||| || ||||||||||| ||||||  ||||||||||| ||||||||  |    
T  12011290 acatttggaatgttttcaatatttgagtctataactctagtcttccctaaacaaagcaattttagggtcttttgagataattcacgaagaaatcatgcaa 12011389  T
Q  107 attggcaaagcaagaacattcggagatttatgaagac 143  Q
    ||| |||||||||||||||||| | |||| |||||||    
T  12011390 attagcaaagcaagaacattcgaaaatttgtgaagac 12011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 14235383 - 14235505
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaa 98  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || | ||||  | |||||| ||||||||||| |||||| |||||||||||| |||    
T  14235383 ttttgggacatttgtaatgttttctatatttgagtcatgtaattatattattcccgaaacatagcaattttagggtgttttgatgtaattcacgaagaaa 14235482  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    |||||  |||||||||| |||||    
T  14235483 tcatgcaaattggcaaaacaaga 14235505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 18527605 - 18527721
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||| ||||||||||||||||||||||||||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| ||||||||  |||    
T  18527605 tttgtaatcttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaat 18527704  T
Q  109 tggcaaagcaagaacat 125  Q
     || ||| |||||||||    
T  18527705 cggtaaatcaagaacat 18527721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 33192340 - 33192248
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||  |||||||||||||||||| || ||||||    
T  33192340 tttgtaatgttttctatatttgagtctgtaattctattcttccctaaacatagcaattttagggtgtttttgaagtaattcacaaagaaatca 33192248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 20107852 - 20107728
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaat 99  Q
    |||||| || ||||||||||||||||||||||||| ||||||| |||| ||||  | |||||| ||||||| ||||||||||||||| ||||||| ||||    
T  20107852 ttttggaacttttgtaatgttttctatatttgagtttgtaattatagttttcccgaaacatagcaattttaggggtttttgaagtaaatcacgaagaaat 20107753  T
Q  100 catgtgaattggcaaagcaagaaca 124  Q
    ||||  ||| |||||| ||||||||    
T  20107752 catgcaaatcggcaaatcaagaaca 20107728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 18734684 - 18734810
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt--agggtttttgaagtaattcacgaacaaa 98  Q
    ||||| ||| |||||||||||||| |||||||||| |||||||||||| ||||  | |||||| ||||||   ||||||||||||||||||||||| |||    
T  18734684 ttttgagacttttgtaatgttttcaatatttgagtatgtaattctagttttcctgaaacatagcaatttttgggggtttttgaagtaattcacgaagaaa 18734783  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  ||| |||||| |||||||||    
T  18734784 tcatgcaaatcggcaaatcaagaacat 18734810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 27116322 - 27116465
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg-tttttgaagtaattcacgaacaaat 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||  | |||||| |||| ||||| ||||| | ||||||||| || ||||    
T  27116322 ttttgggacatttgtaatgttttctatattttagtatgtaattctattcttcccgaaacatagcaattctagggtttttttatgtaattcacaaagaaat 27116421  T
Q  100 catgtgaattggcaaagcaagaacattcggagatttatgaagac 143  Q
    ||||  ||| ||||||| |||||||| || |||||  |||||||    
T  27116422 catgcaaatcggcaaagtaagaacatccgaagattggtgaagac 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 25402539 - 25402660
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||  | | |||| |||||||  ||| ||||||||||||||||||| |||||| |    
T  25402539 ggacttttgtaatgttttctatatttgagtctctaattctagttttcctgaaatatagcaattttaggggggttttgaagtaattcacgaagaaatcaag 25402638  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      |||||||||| |||||||||    
T  25402639 caaattggcaaatcaagaacat 25402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 26101854 - 26101714
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaatcat 102  Q
    |||| ||||||||||||||||||||| || | |||||||||| ||||||  | |||||| |||| ||||||  |||||| ||| |||||||| |||||||    
T  26101854 gggatatttgtaatgttttctatattggaatatgtaattctattcttcccgaaacatagcaattatagggtgtttttgatgtagttcacgaagaaatcat 26101755  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagac 143  Q
    |  |||||||||||||||||||| || |||||  |||||||    
T  26101754 gcaaattggcaaagcaagaacatccgaagattagtgaagac 26101714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14782528 - 14782402
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||| ||| ||||||||||||||||||||| |||| ||||||||||| ||||  | |||||| |||||||  || |||||||||||||||||||| |||    
T  14782528 ttttgagacttttgtaatgttttctatatttcagtcagtaattctagttttcccgaaacatagcaattttatgggatttttgaagtaattcacgaagaaa 14782429  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  ||| || ||| |||||||||    
T  14782428 tcatgcaaatcggaaaatcaagaacat 14782402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 15542411 - 15542533
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||| || |  | |||||| |||||||  ||||||||||||||||||||||| ||||||     
T  15542411 gggacttttgtaatgttttctatatctgagtatgtaattctagtttttccgaaacatagcaattttaaggggtttttgaagtaattcacgaagaaatcac 15542510  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| |||||||||    
T  15542511 gcaaatcggcaaatcaagaacat 15542533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13267843 - 13267698
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||| ||| ||||||||||||||||| |||||||||||| ||||  | |||||  |||||||  ||||||||||||||||||||||| |||    
T  13267843 ttttgggacttttttaacgttttctatatttgagtttgtaattctagttttcccaaaacataacaattttatggggtttttgaagtaattcacgaagaaa 13267744  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||  | | || ||| |||||||||  | |||||| ||||||||    
T  13267743 tcatgcaagtcgggaaatcaagaacatctgaagatttgtgaagact 13267698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 22624600 - 22624471
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggc 112  Q
    ||||||||||||||||| |||||||||||||||| || |  | |||||| ||||||||||  |||||||||||||||||||| ||||||||  ||| ||     
T  22624600 taatgttttctatattttagtctgtaattctagtttttccgaaacatagaaattttaggggatttttgaagtaattcacgaagaaatcatgcaaatcgga 22624501  T
Q  113 aaagcaagaacattcggagatttatgaaga 142  Q
    ||| ||||||||| || ||| || ||||||    
T  22624500 aaatcaagaacatccgaagaattgtgaaga 22624471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 26611435 - 26611556
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt--tagggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||  | | |||| |||||  | |||||| ||||||||||||| || ||||||||    
T  26611435 ggacttttgtaatgttttctatatttgagtctgtaattctagttttcctgaaatatagcaatttgatggggtttctgaagtaattcacaaagaaatcatg 26611534  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      |||||||||| ||| |||||    
T  26611535 caaattggcaaatcaaaaacat 26611556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 15631032 - 15631150
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg----gtttttgaagtaattcacgaacaaatcatgtga 106  Q
    ||||||||||||||||||||||||| |||||||||||| ||||  | |||||| |||||||||     ||||||||||||||||| || |||||||   |    
T  15631032 tttgtaatgttttctatatttgagtatgtaattctagttttcccgaaacatagcaattttaggttaattttttgaagtaattcacaaagaaatcatccaa 15631131  T
Q  107 attggcaaagcaagaacat 125  Q
    ||||||||| |||||||||    
T  15631132 attggcaaatcaagaacat 15631150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 21663193 - 21663316
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta---gggtttttgaagtaattcacgaacaaatca 101  Q
    ||||| || |||||||| ||||||||||||||||||||| |||| ||||  | |||||| |||||||   ||||||||||||  ||||||||| ||||||    
T  21663193 gggactttagtaatgttctctatatttgagtctgtaattttagttttcctaaaacatagcaattttaggggggtttttgaagcgattcacgaagaaatca 21663292  T
Q  102 tgtgaattggcaaagcaagaacat 125  Q
    ||| ||| |||||| |||||||||    
T  21663293 tgtaaatcggcaaatcaagaacat 21663316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 27546382 - 27546256
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaa 97  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||  | || ||| ||||| ||||   |||||||| ||||||||||| ||    
T  27546382 ttttgagacttttgtaatgttttctatatttgagtctgcaattctagttttcccaaaacgtagcaatttgaggggtttttttgaaataattcacgaagaa 27546283  T
Q  98 atcatgtgaattggcaaagcaagaaca 124  Q
    ||||||  ||| |||||| ||||||||    
T  27546282 atcatgcaaatcggcaaatcaagaaca 27546256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 22507501 - 22507599
Alignment:
Q  29 tttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaacat 125  Q
    |||||||||||||||||||| ||||  | |||||| ||||||||||  |||||||||||||||||||| ||||||||  ||| |||||| |||||||||    
T  22507501 tttgagtctgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacat 22507599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15811549 - 15811666
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||||||||||||||||||||||||| |   ||| ||||  | |||||| |||||||  ||||| |||| |||||||||||| ||||||||    
T  15811549 ggacatttgtaatgttttctatatttgagtctgtactcagagttttcctgaaacatagcaattttagggggttcttgatgtaattcacgaagaaatcatg 15811648  T
Q  104 tgaattggcaaagcaaga 121  Q
      |||||| |||||||||    
T  15811649 caaattggaaaagcaaga 15811666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 18832208 - 18832087
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||| ||||||||||||||||||||  | ||||  | |||||| ||||| |  |||||||||||||| |||||||| ||||||||    
T  18832208 ggacttttgtaatgttttccatatttgagtctgtaattctgattttcccaaaacatagcaatttaagggggtttttgaagtacttcacgaagaaatcatg 18832109  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      |||||| ||| |||||||||    
T  18832108 caaattggaaaatcaagaacat 18832087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 15158892 - 15159004
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||| ||||||||| | |||||||| ||| ||||  | |||||| |||||||  |||||||| |||||||||||||| |||||||    
T  15158892 gggacttttgtaatgttttttatatttgaatttgtaattcaagttttcccaaaacatagcaattttagggggtttttaaagtaattcacgaagaaatcat 15158991  T
Q  103 gtgaattggcaaa 115  Q
    |  ||||||||||    
T  15158992 gcaaattggcaaa 15159004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 16180712 - 16180616
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaat 99  Q
    ||||| ||||||||||||||| |||||||||||||||||||| | ||||  | |||||  |||||||  ||||||||||||||||||||||| ||||    
T  16180712 gggacttttgtaatgttttctgtatttgagtctgtaattctaattttcctaaaacataacaattttagggggtttttgaagtaattcacgaagaaat 16180616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 21450755 - 21450639
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||| |||||||||| | || |  | |||||| |||||||  ||| ||||||||||||||||||| ||||||||  |||    
T  21450755 tttgtaatgttttctatatttgagtttgtaattctaattttaccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaat 21450656  T
Q  109 tggcaaagcaagaacat 125  Q
      ||||| |||||||||    
T  21450655 cagcaaatcaagaacat 21450639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 28009738 - 28009640
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||| |||||||||||||||| |||||||| ||| ||||  | |||||| |||||||  ||||||||| ||||| ||||||| ||||||||    
T  28009738 gacatttgtaatcttttctatatttgagtatgtaattccagttttcccgaaacatagcaattttagggggtttttggagtaaatcacgaagaaatcatg 28009640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 15526901 - 15527033
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgt 104  Q
    ||||||||||||||||||||||||| |||||||||||  ||| ||||  | |||||| |||||||||  ||| |||  ||||||||| || ||||||||     
T  15526901 gacatttgtaatgttttctatattttagtctgtaattagagttttcctgaaacatagcaattttaggatgttcttgttgtaattcacaaagaaatcatgc 15527000  T
Q  105 gaattggcaaagcaagaacattcggagatttatg 138  Q
     ||||||||||| ||| |||| || |||||||||    
T  15527001 aaattggcaaagtaag-acatccgaagatttatg 15527033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 21333174 - 21333292
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||| | |||||    ||| ||||| | |||||| ||||||||||   ||||||||||||||||||| |||||||    
T  21333174 gggacttttgtaatgttttctatatttgaatatgtaa----agttttccaaaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcat 21333269  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| |||||||||    
T  21333270 gcaaatcggcaaatcaagaacat 21333292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 14780596 - 14780696
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||||| |||||||| | ||||  | |||||  ||||| |  ||| ||||||||||||||||||| |||||||    
T  14780596 gggacttttgtaatgttttctatatttgagtctataattctaattttcccgaaacatatcaatttgaggggggttttgaagtaattcacgaataaatcat 14780695  T
Q  103 g 103  Q
    |    
T  14780696 g 14780696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 22621783 - 22621646
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg----gtttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||||||||||||||| |||| ||||| ||||||  | ||||||  | |||||  |||| ||||    |||||||| |||||||||||| ||||||||      
T  22621783 atttgtaatgttttctttattcgagtcggtaattacattcttcccgaaacataccaattctaggatgtgtttttgatgtaattcacgaagaaatcatgca 22621684  T
Q  106 aattggcaaagcaagaacattcggagatttatgaagac 143  Q
    |||||||||||||||||||| || |||||  |||||||    
T  22621683 aattggcaaagcaagaacatccgaagattagtgaagac 22621646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22626253 - 22626391
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||||| |||||||||||||||||||||||||||||||||   ||| ||||  | |||| | |||||||||  ||| |||| |||||||||||| | |    
T  22626253 ttttgggaaatttgtaatgttttctatatttgagtctgtaatcagagttttcctgaaacatggcaattttagggtgttcttgatgtaattcacgaaaaga 22626352  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatg 138  Q
    |||||  ||| ||||||| ||| ||||||| | |||||||    
T  22626353 tcatgcaaatcggcaaagtaag-acattcgaaaatttatg 22626391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 22665779 - 22665711
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg 74  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||   | |||||| ||||||||||    
T  22665779 ggacatttgtaatgttttctatatttgagtttgtaattctattcttctcgaaacatagcaattttaggg 22665711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 44797109 - 44797011
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||||||| ||||||||||||||||||   ||| ||||  | ||||||||||||||||  ||| |||| |||||||||||| || |||||    
T  44797109 gacatttgtaatgttttttatatttgagtctgtaatcagagttttcccgaaacatagtaattttagggtgttcttgatgtaattcacgaagaagtcatg 44797011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 9403319 - 9403212
Alignment:
Q  20 ttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaaatcatgtgaattggcaaag 116  Q
    |||||||||||||||||| |||||||||| ||||  | ||||   ||||||||||   |||||||||||||||||||| |||||| |  ||||||||||     
T  9403319 ttttctatatttgagtctataattctagttttcccaa-acatgacaattttagggggatttttgaagtaattcacgaagaaatcaaggaaattggcaaat 9403221  T
Q  117 caagaacat 125  Q
    |||||||||    
T  9403220 caagaacat 9403212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16915295 - 16915420
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt--tagggtttttgaagtaattcacgaacaaa 98  Q
    |||||| || |||||||||||||||||||||||||  ||||||||| | |||   | |||||| |||||   ||| |||||||||||||||||||| |||    
T  16915295 ttttggaacttttgtaatgttttctatatttgagtaagtaattctacttttctcgaaacatagcaatttgagaggttttttgaagtaattcacgaagaaa 16915394  T
Q  99 tcatgtgaattggcaaagcaagaaca 124  Q
    |||||  ||| || ||| ||||||||    
T  16915395 tcatgcaaatcggaaaatcaagaaca 16915420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17445064 - 17444970
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaa 94  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||| ||||||  | | |||| ||||||||| | |||||  ||||||||||||    
T  17445064 ttttgggatatttgtattgttttttatatttgagtctgtaattctattcttcctgagaaatagcaattttaggatgttttgttgtaattcacgaa 17444970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 16114794 - 16114694
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||||||| |||| | ||||||| |  ||||||| | |||||| |||||||||  ||| |||| |||||||| ||| |||||||    
T  16114794 gggacatttgtaatgttttctataattgaatatgtaattttgttcttccaaaaacatagcaattttaggatgttcttgatgtaattcatgaagaaatcat 16114695  T
Q  103 g 103  Q
    |    
T  16114694 g 16114694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 16817211 - 16817311
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| || |||||||||||||||||||| |||||||| ||||| ||||  | |||||| ||||| |  ||| ||||||||| ||||||||| |||||||    
T  16817211 gggactttagtaatgttttctatatttgactctgtaatactagttttcctgaaacatagcaatttgaggggggttttgaagtcattcacgaagaaatcat 16817310  T
Q  103 g 103  Q
    |    
T  16817311 g 16817311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 18827390 - 18827290
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||| |||||||||||||||||| |||||||||| ||||  | |||||  |||||||  | ||||||||||||||||| ||| ||| |||    
T  18827390 gggacttttgtaattttttctatatttgagtctataattctagttttcccaaaacatatcaattttatggagtttttgaagtaattcatgaagaaaacat 18827291  T
Q  103 g 103  Q
    |    
T  18827290 g 18827290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 24282986 - 24282898
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||||||| ||||||||||||| ||||||  |  ||||| |||||||||  ||| |||| |||||||||||| ||||||    
T  24282986 taatgttttctatatttgtgtctgtaattctattcttcccgaaccatagcaattttagggtgttcttgatgtaattcacgaagaaatca 24282898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12210263 - 12210157
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattct-agtcttccatacacatagtaatttta---gggtttttgaagtaattcacgaaca 96  Q
    |||||| || ||||||||||||||||||||||| | |||| |||| | | ||||| | |||||| |||||||   ||| ||||||||||||||||||| |    
T  12210263 ttttggaacttttgtaatgttttctatatttgattttgtatttctaatttttccaaaaacatagcaattttaggggggcttttgaagtaattcacgaaga 12210164  T
Q  97 aatcatg 103  Q
    |||||||    
T  12210163 aatcatg 12210157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15571787 - 15571889
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||| |||| |||||||| |||||||||||| ||| |||||||||| ||||||  | |||||  |||||||||  ||| |||||||||||||| || |||    
T  15571787 ttttaggacgtttgtaatattttctatatttaagtatgtaattctattcttcccaaaacataacaattttagggagttcttgaagtaattcacaaagaaa 15571886  T
Q  99 tca 101  Q
    |||    
T  15571887 tca 15571889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 17543218 - 17543285
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag 72  Q
    ||||||||||||||||||| | |||| |||| |||||||||| |||||| || |||||| ||||||||    
T  17543218 gggacatttgtaatgttttatgtattggagtatgtaattctattcttccctaaacatagcaattttag 17543285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35133882 - 35133760
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||| |||||||||||||||||||||||||||| ||||||   | | || |  | |||||| |||||||||  ||| |||| |||||||||||| |||    
T  35133882 ttttggaacatttgtaatgttttctatatttgagtttgtaatcagaatttttctgaaacatagcaattttagggtgttcttgatgtaattcacgaagaaa 35133783  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    |||||  |||  |||||||||||    
T  35133782 tcatgaaaatcagcaaagcaaga 35133760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 9783085 - 9783130
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||    
T  9783085 acatatgtaatattttctatatttgagtctgtaattctattcttcc 9783130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 16786206 - 16786318
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaattggc 112  Q
    |||| ||| |||||||||||| |||||||||| ||||||  | |||||| |||||||  | ||||||||  ||||||||||| ||||||||  ||| |||    
T  16786206 taatatttactatatttgagtatgtaattctattcttcccgaaacatagcaattttatggtgtttttgatctaattcacgaagaaatcatgcaaatcggc 16786305  T
Q  113 aaagcaagaacat 125  Q
    |||  ||||||||    
T  16786306 aaactaagaacat 16786318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23035019 - 23035060
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    |||| ||| |||||||||||||||||||||||||||||||||    
T  23035019 ttttaggatatttgtaatgttttctatatttgagtctgtaat 23035060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 26647463 - 26647496
Alignment:
Q  9 catttgtaatgttttctatatttgagtctgtaat 42  Q
    ||||||||||||||||||||||||||||||||||    
T  26647463 catttgtaatgttttctatatttgagtctgtaat 26647496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 7881736 - 7881673
Alignment:
Q  58 acatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaa 119  Q
    |||||| |||||||||  |||||||| |||||||||||| ||||||||  ||||||||||||||    
T  7881736 acatagcaattttaggatgtttttgatgtaattcacgaagaaatcatgcaaattggcaaagcaa 7881673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 24901202 - 24901162
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  24901202 ggacatttgtattgttttcaatatttgagtctgtaattcta 24901162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 21848617 - 21848504
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||||||||| |||||||||||||  |||| | ||| |  ||||||  | |||||| |||||||||  |||||||| ||||||||| || ||||||||      
T  21848617 acatttgtaacgttttctatatttaggtctattattatgttcttcctgaaacatagaaattttagggtgtttttgatgtaattcacaaagaaatcatgca 21848518  T
Q  106 aattggcaaagcaa 119  Q
    ||| ||||||||||    
T  21848517 aatcggcaaagcaa 21848504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26652574 - 26652528
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattcta 46  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  26652574 ttttgggacatttgtaacgttttatatatttgagtcatgtaattcta 26652528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 26581567 - 26581483
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctag-tcttccatacacatagtaattttagggt-ttttgaagtaat 87  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| ||||||  | |||||| ||||||||||| |||||| |||||    
T  26581567 gggacatttgtaatgttttctata-ttgagtcatgtaattatagttcttcctgaaacatagcaattttagggtgttttgatgtaat 26581483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 25537549 - 25537427
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||  | |||||| |||||||  ||| ||||||||||||||||||| ||||||||    
T  25537549 ggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatg 25537450  T
Q  104 tgaattggcaaagcaagaacatt 126  Q
      ||| |||||| ||||||||||    
T  25537449 caaatcggcaaatcaagaacatt 25537427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 27907625 - 27907747
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||  | |||||| ||||||||||  |||||||||||||||||||| |||||||    
T  27907625 gggacttttgtaatgttttctatatttgagtttgtaattctagttttcccgaaacatagcaattttagggtttttttgaagtaattcacgaagaaatcat 27907724  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| |||||||||    
T  27907725 gcaaatcggcaaatcaagaacat 27907747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 18758295 - 18758154
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt--agggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||  | |||||| ||||||  |||| ||||||||||||||||||| ||| |||    
T  18758295 gggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttagaggggttttgaagtaattcacgaagaaaacat 18758196  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |  ||| || ||| ||||||||| || ||| || ||||||||    
T  18758195 gcaaatcggaaaatcaagaacatccgaagacttgtgaagact 18758154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 25886294 - 25886443
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||  | |||||| |||||||  |||||||| ||||||||||| || |||||||    
T  25886294 gggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttagggggtttttaaagtaattcacaaagaaatcat 25886393  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagactattggaag 152  Q
       ||| || ||| |||||||||  | |||||| |||||||| |||||||    
T  25886394 acaaatcggaaaatcaagaacatcagaagatttgtgaagacttttggaag 25886443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 17350971 - 17350852
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||  | |||||| |||||||  ||||||||||| ||||||||||| ||||||||    
T  17350971 ggacttttgtaatgttttctatatttgagtccgtaattctagttttcccgaaacatagcaattttagggggtttttgaattaattcacgaagaaatcatg 17350872  T
Q  104 tgaattggcaaagcaagaac 123  Q
      ||| |||||| |||||||    
T  17350871 caaatcggcaaatcaagaac 17350852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 25196605 - 25196483
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||||  | |||||| |||||||  ||| ||||||||||||||||||| ||||||     
T  25196605 gggacttttgtaatgttttctatatttgagtctgtatttctagttttcccaaaacatagcaattttagggggattttgaagtaattcacgaaaaaatcaa 25196506  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| |||||||||    
T  25196505 gcaaatcggcaaatcaagaacat 25196483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 25532224 - 25532091
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||| |||||||||||||||| ||||  | |||||| |||||||||  ||| |||||| |||||||||| ||||||||  |||    
T  25532224 tttgtaatgttttctatatttcagtctgtaattctagttttcccgaaacatagcaattttagggtgttcttgaagcaattcacgaagaaatcatgcaaat 25532125  T
Q  109 tggcaaagcaagaacattcggagatttatgaaga 142  Q
     |||||| ||||||||| || ||| || ||||||    
T  25532124 cggcaaatcaagaacatccgaagaattgtgaaga 25532091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 25922598 - 25922460
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||| | ||| | |||||| ||||| | ||| ||||||||||||||||||| ||||||||    
T  25922598 gggacttttataatgttttctatatttgagtctgtaattatagtttaccagaaacatagcaatttgagggggttttgaagtaattcacgaagaaatcatg 25922499  T
Q  104 tgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
      ||| |||||| ||||||||| || ||| || ||||||    
T  25922498 caaatcggcaaatcaagaacatccgaagaattgtgaaga 25922460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 29144632 - 29144507
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| || |  | |||||  |||||||  ||||||||||||||||||||| | |||    
T  29144632 ttttgggacttttgtaatgttttcaatatttgagtctgtaattctagttttaccgaaacataacaattttagggggtttttgaagtaattcacggagaaa 29144533  T
Q  99 tcatgtgaattggcaaagcaagaaca 124  Q
    |||||  ||||| |||| ||||||||    
T  29144532 tcatgcaaattgacaaatcaagaaca 29144507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34574511 - 34574366
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||  | || ||| |||||||  ||| |||||||||||||||| || |||    
T  34574511 ttttgggacttttgtaatgttttatatatttgagtatgtaattctagttttcccgaaacttagcaattttaggggggttttgaagtaattcacaaagaaa 34574412  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||  ||| | |||| ||||||||| || |||||| ||||||||    
T  34574411 tcatgcaaatcgacaaatcaagaacatccgaagatttgtgaagact 34574366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18970872 - 18970975
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||| || ||||||  | ||||||||||||||||||  ||||| |||||||||||| ||||    
T  18970872 ttttgcgacatttgtaatgttttctatttttgaatctgtaattttattcttcctgaaacatagtaattttagggtactttgatgtaattcacgaagaaat 18970971  T
Q  100 catg 103  Q
    ||||    
T  18970972 catg 18970975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 17199514 - 17199421
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||||||||||||||||| ||||  | |||||| ||||| | ||| ||||||||||||||| ||| ||||||||    
T  17199514 tttgtaatgttttctatatttgagtctgtaattctagttttcccaaaacatagcaatttgagggggttttgaagtaattcatgaagaaatcatg 17199421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 27421065 - 27420948
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||  | |||||| ||||||||| | |||||  |||||||||||  ||||||||    
T  27421065 gggacatttgtaatgttttctatatttgagtatgtaattatattcttcccgaaacatagcaattttaggatattttgttgtaattcacgatgaaatcatg 27420966  T
Q  104 tgaattggcaaagcaaga 121  Q
    |  || ||||||||||||    
T  27420965 tatatcggcaaagcaaga 27420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22569052 - 22568906
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta---gggtttttgaagtaattcacgaacaa 97  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||| ||||  | |||||| |||||||   || |||||||||||||||| ||| ||    
T  22569052 ttttggtacttttgtaatgttttctatatttgagtttgtaattctagttttcccgaaacatagcaattttagagggttttttgaagtaattcatgaagaa 22568953  T
Q  98 atcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    ||| ||  |||  ||||  ||||||||| || |||||| ||||||||    
T  22568952 atcgtgcaaatctgcaactcaagaacatccgaagatttgtgaagact 22568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 24086415 - 24086530
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||| || ||||||||||||| ||||||||||| ||| | | |||||| |||||||  ||| ||||||||||||||||||| ||||||||  |||    
T  24086415 tttgtaatgcttactatatttgagtccgtaattctagttttctagaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaat 24086514  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  24086515 cggcaaatcaagaaca 24086530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 11464420 - 11464518
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatca 101  Q
    ||||||||||||||||||||||||||||||| |||| ||||| ||||||  | |||||| |||||||  ||||| ||||||||| ||||||| ||||||    
T  11464420 gggacatttgtaatgttttctatatttgagtatgtagttctattcttcccgaaacatagcaattttagggggttattgaagtaaatcacgaagaaatca 11464518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 28930268 - 28930146
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt--agggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||| || |  | |||||| ||||||  |||| ||||||||||||||||||| |||||||    
T  28930268 gggacttttgtaatgttttctatatttgagtctataattatagtttttctgaaacatagcaattttagaggggttttgaagtaattcacgaagaaatcat 28930169  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| ||| |||||    
T  28930168 gcaaatcggcaaatcaaaaacat 28930146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 20379280 - 20379180
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||| | ||| |||||||||||| ||||  | |||||| ||||| ||||  |||||||||||||||||||| |||||||    
T  20379280 gggacttttgtaatgttttctatatctaagtatgtaattctagttttcccaaaacatagcaatttgaggggctttttgaagtaattcacgaagaaatcat 20379181  T
Q  103 g 103  Q
    |    
T  20379180 g 20379180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 22627374 - 22627261
Alignment:
Q  9 catttgtaatgttttctatatttgagtctgtaattctagtcttcc-atacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtga 106  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||| ||| |||||| ||||||||| | |||||  |||||||||||| ||||||||       
T  22627374 catttgtaatgttttctttatttgattctgtaattctattcttcctata-acatagcaattttaggatgttttgttgtaattcacgaagaaatcatgcat 22627276  T
Q  107 attggcaaagcaaga 121  Q
    || ||||||||||||    
T  22627275 atcggcaaagcaaga 22627261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29851014 - 29850941
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg 74  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||  | |||||| ||||||||||    
T  29851014 ttttgagacatttgtaatgttttctatctttgagtatgtaattctattcttcccgaaacatagcaattttaggg 29850941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 20853066 - 20852955
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaattggc 112  Q
    |||| |||||||||||||||||||||||| |||| ||||  | |||||| |||||||  || |||||||||||||||| ||| ||||||||  ||| | |    
T  20853066 taatattttctatatttgagtctgtaattatagttttcctgaaacatagcaattttaagggttttttgaagtaattcaggaagaaatcatgcaaatcgtc 20852967  T
Q  113 aaagcaagaaca 124  Q
    ||| ||||||||    
T  20852966 aaatcaagaaca 20852955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32087046 - 32086944
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||| ||||||||||||||||| |||||||| || |||||||||| ||||||  | |||||| |||||||||  ||| || ||| |||||||||| |||    
T  32087046 ttttgcgacatttgtaatgttttttatatttgggtttgtaattctattcttcccgaaacatagcaattttagggtgttcttaaagcaattcacgaagaaa 32086947  T
Q  99 tca 101  Q
    |||    
T  32086946 tca 32086944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 17891725 - 17891628
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaatc 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||  ||||||  | |||||| | ||||| |||  |||||| |||||||||||| |||||    
T  17891725 gggacatttgtaatgttttctatatttgagtttgtaatcctgttcttcccaaaacatagcagttttaaggtgcttttgatgtaattcacgaagaaatc 17891628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23010142 - 23010212
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta 71  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||| ||||||  | |||||| |||||||    
T  23010142 ttttgggacatttgtattgttttctatatttgagtcttgaattctattcttcctgaaacatagcaatttta 23010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 27540369 - 27540490
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt--agggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||| |||||||| |||||||||| || | ||||  | |||||| ||||||  |||||||||| | ||||||||||| ||||||||    
T  27540369 ggacttttgtaatgttttgtatatttgggtctgtaattataattttcccgaaacatagaaattttagagggtttttgtattaattcacgaagaaatcatg 27540468  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||| || ||| |||||||||    
T  27540469 caaatcggtaaatcaagaacat 27540490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 21905713 - 21905599
Alignment:
Q  12 ttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg----tttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    |||||| ||||||||||    |||||||||||||||| ||| ||||||||  ||    
T  21905713 ttgtaatgtttt--atatttgagtctgtaattctagttttcccggaacatagcaattttagggtttttttttgaagtaattcatgaagaaatcatgcaaa 21905616  T
Q  108 ttggcaaagcaagaaca 124  Q
    |  ||||| ||||||||    
T  21905615 tcagcaaatcaagaaca 21905599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26313176 - 26313124
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||| ||||    
T  26313176 ttttggaacttttgtaatgttttttatatttgagtctgtaattctagttttcc 26313124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 29717461 - 29717574
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatt-ttagggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||| ||||||  || ||||||  | |||||| |||| | ||| ||||||| |||||||||||| |||| |||    
T  29717461 gggatatttgtaatgttttctatatttgagtatgtaat--tattcttcccgaaacatagcaattctaaggttttttgatgtaattcacgaagaaataatg 29717558  T
Q  104 tgaattggcaaagcaa 119  Q
      ||| ||||||||||    
T  29717559 caaatcggcaaagcaa 29717574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 32141496 - 32141612
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgt 104  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||  | |||||| |||| || | | |||||| | |||||||||| ||||||||     
T  32141496 gacatttgtaatgttttctatatttgagtcatgtaattcaattcttcctgaaacatagcaattctaagatgttttgatgaaattcacgaagaaatcatgc 32141595  T
Q  105 gaattggcaaagcaaga 121  Q
     ||| |||||| |||||    
T  32141596 aaatcggcaaaacaaga 32141612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 18553280 - 18553217
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta 71  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||  | |||||| |||||||    
T  18553280 acatttgaattgttttctatatttgagtctgtaattctattcttcctaaaacatagcaatttta 18553217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 18545266 - 18545196
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    |||||||||| | |||||||||||||||||| |||||||||| ||||||  | |||||| ||||| |||||    
T  18545266 gggacatttgaattgttttctatatttgagtttgtaattctattcttcccgaaacatagcaatttcagggt 18545196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 26651742 - 26651787
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttc 52  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||    
T  26651742 gacatttgtaatgttttctatatttaagtatgtaattctattcttc 26651787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 28918176 - 28918139
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagt 48  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28918176 tttgtaatgttttctatatatgagtctgtaattctagt 28918139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 29834856 - 29834811
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||    
T  29834856 acatttgtaatgttttctatatttgagtttgtaattttattcttcc 29834811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 34579876 - 34580016
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaatcat 102  Q
    |||| |||| |||| |||| ||||||| | | |||||||||| |  |||  | |||||| |||||||||||  |||| | |||||||||||| |||||||    
T  34579876 gggatatttataattttttttatatttcattatgtaattctattagtcccaatacatagcaattttagggtgttttttatgtaattcacgaagaaatcat 34579975  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagac 143  Q
    |  ||| |||||||||||||||| || |||||  |||||||    
T  34579976 gcaaatcggcaaagcaagaacatccgaagattagtgaagac 34580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 34585625 - 34585765
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaatcat 102  Q
    |||| |||| |||| |||| ||||||| | | |||||||||| |  |||  | |||||| |||||||||||  |||| | |||||||||||| |||||||    
T  34585625 gggatatttataattttttttatatttcattatgtaattctattagtcccaatacatagcaattttagggtgttttttatgtaattcacgaagaaatcat 34585724  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagac 143  Q
    |  ||| |||||||||||||||| || |||||  |||||||    
T  34585725 gcaaatcggcaaagcaagaacatccgaagattagtgaagac 34585765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8501609 - 8501713
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaa 98  Q
    |||||||||||||| ||||||||||||||| ||  | |||||||||| | ||| | | |||||  ||||||||||| |||||| ||||||||| || |||    
T  8501609 ttttgggacatttgcaatgttttctatattcgaaacatgtaattctatttttcaagaaacatataaattttagggtgttttgatgtaattcacaaataaa 8501708  T
Q  99 tcatg 103  Q
    |||||    
T  8501709 tcatg 8501713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 18120666 - 18120773
Alignment:
Q  20 ttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggcaaagc 117  Q
    |||| ||||| |||||||||||||||| | ||||  | |||||  ||||| ||||  |||||||||||||||||||| ||||||||  ||| || ||| |    
T  18120666 ttttttatatatgagtctgtaattctaattttcccgaaacataacaatttcagggattttttgaagtaattcacgaagaaatcatgcaaatcggaaaatc 18120765  T
Q  118 aagaacat 125  Q
    ||||||||    
T  18120766 aagaacat 18120773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19139640 - 19139540
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtttttgaagtaattcacgaacaaatc 100  Q
    |||||||||||||||||||||||  ||||||||||   |||||||| | |||   | |||||| ||||||| |||| |||||||||  |||||| |||||    
T  19139640 ttttgggacatttgtaatgttttaaatatttgagttaataattctattattctcgaaacatagcaattttaaggttcttgaagtaaaacacgaagaaatc 19139541  T
Q  101 a 101  Q
    |    
T  19139540 a 19139540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18458464 - 18458514
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtctt 51  Q
    |||| ||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  18458464 ttttaggacatttgtaatattttttatatttgagtctataattctattctt 18458514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 1e-27; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9134806 - 9134661
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtttt--tgaagtaattcacgaacaaa 98  Q
    ||||| ||| |||||||| |||||||||||||||| ||||||| |||| ||||  | |||||| ||||||||| ||||  |||||||||||||||| |||    
T  9134806 ttttgagacttttgtaattttttctatatttgagtatgtaattatagttttcccgaaacatagcaattttaggattttattgaagtaattcacgaagaaa 9134707  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||| ||| |||||| ||||||||| || |||||| ||||||||    
T  9134706 tcatgtaaatcggcaaatcaagaacatccgaagatttgtgaagact 9134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 26249184 - 26249319
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||| |||||||||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| ||||||||  |||    
T  26249184 tttgtaatgttttctatatttgagtttgtaattctagttttcctaaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaat 26249283  T
Q  109 tggcaaagcaagaacattcggagatttatgaagact 144  Q
     |||||| ||| | ||| || |||||| ||||||||    
T  26249284 cggcaaatcaaaatcatccgaagatttgtgaagact 26249319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 5236965 - 5237091
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||    |||||| |||||||  ||| ||||||||||||||||||| |||    
T  5236965 ttttgggacttttgtaatgttttctgtatttgagtctgtaattctagttttcccgtaacatagcaattttaggggggttttgaagtaattcacgaagaaa 5237064  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  ||| |||||| |||||||||    
T  5237065 tcatgcaaatcggcaaatcaagaacat 5237091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6046525 - 6046400
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||  | ||||   ||||||||||  |||||||||||||||||||| |||    
T  6046525 ttttgggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatgacaattttaggggttttttgaagtaattcacgaagaaa 6046426  T
Q  99 tcatgtgaattggcaaagcaagaaca 124  Q
    |||||  ||| | |||| ||||||||    
T  6046425 tcatgcaaatcgacaaatcaagaaca 6046400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 21502848 - 21502717
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||  | |||||| |||| ||||  |||||||| |||||||||||| |||||||    
T  21502848 gggacatttgtaatgttttctagacttgagtctgtaattctattcttcccgaaacatagcaattctagggtgtttttgaggtaattcacgaagaaatcat 21502749  T
Q  103 gtgaattggcaaagcaagaacattcggagatt 134  Q
    |  ||| | |||||||||||||| || |||||    
T  21502748 gcaaatcgacaaagcaagaacatccgaagatt 21502717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 10611707 - 10611585
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||| || |||||| ||||||||||  ||||||||||||| |||||| |||| ||    
T  10611707 gggacttttgtaatgttttctatatttgagtctctaattctagttttccctaaacatagcaattttaggggttttttgaagtaatccacgaaaaaattat 10611608  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||  |||||||||    
T  10611607 gcaaatcggcaattcaagaacat 10611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9978283 - 9978158
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || |  | |||||| ||||| |  ||| |||| |||||||||||||| |||    
T  9978283 ttttgggacttttgtaatgttttctatatttgagtctgtaattctagtttttctgaaacatagcaatttgaggggggttttaaagtaattcacgaagaaa 9978184  T
Q  99 tcatgtgaattggcaaagcaagaaca 124  Q
    |||||  ||| |||||| ||||||||    
T  9978183 tcatgcaaatcggcaaatcaagaaca 9978158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 13252766 - 13252899
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||| |||||||||||||||||||| ||||  | |||||  |||||||  ||| ||||||||||||||||||| ||||||||  |||    
T  13252766 tttgtaatgttttctatttttgagtctgtaattctagttttcccaaaacataacaattttaggggggttttgaagtaattcacgaagaaatcatgcaaat 13252865  T
Q  109 tggcaaagcaagaacattcggagatttatgaaga 142  Q
     | |||| ||||||||| || ||| |||||||||    
T  13252866 cgacaaatcaagaacatccgaagaattatgaaga 13252899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 20597593 - 20597472
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||  | |||||| |||||||  ||||||||||||||| ||||||| ||||||||    
T  20597593 ggacttttgttatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaagtcacgaagaaatcatg 20597494  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      |||  ||||| |||||||||    
T  20597493 caaatcagcaaaccaagaacat 20597472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 8317544 - 8317644
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || |  | |||||| ||||| |||  ||||||||||||||||||||| |||||||    
T  8317544 gggacttttgtaatgttttctatatttgagtctgtaattctagtttttccgaaacatagcaatttgagggtgtttttgaagtaattcacgaagaaatcat 8317643  T
Q  103 g 103  Q
    |    
T  8317644 g 8317644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 25692777 - 25692661
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||| ||||||||||||||||||||||||||||| ||||  | ||||| ||||||||||  ||||||||| ||||||| ||| |||||||   |||    
T  25692777 tttgtaatattttctatatttgagtctgtaattctagttttcccgaaacataataattttaggatgtttttgaaataattcaagaagaaatcattcaaat 25692678  T
Q  109 tggcaaagcaagaacat 125  Q
    ||||||| |||||||||    
T  25692677 tggcaaatcaagaacat 25692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 11804691 - 11804572
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt-agggtttttgaagtaattcacgaacaaatcatgt 104  Q
    |||| ||||||||||||||||||||||||| |||||||||||| ||||  | |||||| ||||||  |||||||||||| |||||||||| ||||||||     
T  11804691 ggacttttgtaatgttttctatatttgagtatgtaattctagttttcccgaaacatagcaattttgggggtttttgaagaaattcacgaagaaatcatgc 11804592  T
Q  105 gaattggcaaagcaagaaca 124  Q
     ||| | |||| ||||||||    
T  11804591 aaatcgacaaatcaagaaca 11804572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 10418548 - 10418417
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||||||||||||||||||||||||||||| ||||| |  ||||||  | |||||| |||||||||  |||||| | |||||||||||| ||||||||      
T  10418548 acatttgtaatgttttctatatttgagtctataattatgttcttcccgaaacatagaaattttaggatgttttttatgtaattcacgaagaaatcatgca 10418449  T
Q  106 aattggcaaagcaagaacattcggagatttatg 138  Q
    ||| ||||||||||| |||| || |||||||||    
T  10418448 aatcggcaaagcaag-acatccgaagatttatg 10418417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 2506915 - 2507031
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgt 104  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||  | |||||| ||||||||||| ||||||  ||||||||||| ||||||||     
T  2506915 gacatttgtaatgttttctatatttgagtcatgtaattctattattcccaaaacatagaaattttagggtgttttgatctaattcacgaagaaatcatgc 2507014  T
Q  105 gaattggcaaagcaaga 121  Q
     |||  |||||||||||    
T  2507015 aaatcagcaaagcaaga 2507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 2927862 - 2927747
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||| | |||||||||| ||||  | |||||| |||||||  ||| ||||||||||||||||||| |||||| |  |||    
T  2927862 tttgtaatgttttctatatttgagtttataattctagttttcctgaaacatagcaattttagtggggttttgaagtaattcacgaagaaatcacgcaaat 2927763  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  2927762 cggcaaatcaagaaca 2927747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 8052537 - 8052654
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg---gtttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||  | |||||| |||||||||   | ||||||||||||||||||| ||||||||  ||    
T  8052537 tttgtaatgttttctatatttgagtttgtaattttagttttcccgaaacatagcaattttaggggaggttttgaagtaattcacgaagaaatcatgcaaa 8052636  T
Q  108 ttggcaaagcaagaacat 125  Q
    | | |||| |||||||||    
T  8052637 tcgacaaatcaagaacat 8052654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 20577492 - 20577398
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||| ||||||||||||| ||||  | |||||| ||||| |  ||| ||||||||||||||||||| ||||||||    
T  20577492 tttgtaatgttttctatatttgagcctgtaattctagtattcccgaaacatagcaatttgaggggggttttgaagtaattcacgaagaaatcatg 20577398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 3585635 - 3585767
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaaatcatgtgaattgg 111  Q
    |||||||||||||||||||||||||||||||||| || |  | |||||| ||||||||||   ||||| ||||| |||||||| ||||||||  ||| ||    
T  3585635 taatgttttctatatttgagtctgtaattctagtttttccgaaacatagcaattttaggggttttttttaagtatttcacgaagaaatcatgcaaatcgg 3585734  T
Q  112 caaagcaagaacattcggagatttatgaagact 144  Q
     ||| |||||| ||||| | |||| ||||||||    
T  3585735 aaaatcaagaatattcgaaaatttgtgaagact 3585767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 9078986 - 9079107
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||||||||||||||| ||||||| |||| ||||  | |||||| |||| ||   |||||||||||||||||||||| ||||||||    
T  9078986 ggacttttgtaatgttttctatatttgagtttgtaattatagttttcccgaaacatagcaattatatgaggtttttgaagtaattcacgaagaaatcatg 9079085  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||| |||| | |||||||||    
T  9079086 caaatcggcatatcaagaacat 9079107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15170868 - 15170984
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||||||| ||| ||||| |  ||||||  | | ||||||||||||||  ||||| || |||||||||||| ||||||||    
T  15170868 ggacatttgtaatgttttctatatttga-tctttaattttgttcttcccaaaatatagtaattttaggatgttttggatgtaattcacgaagaaatcatg 15170966  T
Q  104 tgaattggcaaagcaaga 121  Q
    | ||| ||||||||||||    
T  15170967 taaatcggcaaagcaaga 15170984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 18986848 - 18986969
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatag-taatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||| |||||||||||||||| |||||||||||| |||   | |||||| || || || ||||||||||||||||||||||| ||||||||    
T  18986848 ggacttttgtaatattttctatatttgagtttgtaattctagttttcttgaaacatagctatttgtaggggtttttgaagtaattcacgaagaaatcatg 18986947  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||| |||||| |||||||||    
T  18986948 caaatcggcaaatcaagaacat 18986969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 19001476 - 19001597
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatag-taatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||| |||||||||||||||| |||||||||||| |||   | |||||| || || || ||||||||||||||||||||||| ||||||||    
T  19001476 ggacttttgtaatattttctatatttgagtttgtaattctagttttcttgaaacatagctatttgtaggggtttttgaagtaattcacgaagaaatcatg 19001575  T
Q  104 tgaattggcaaagcaagaacat 125  Q
      ||| |||||| |||||||||    
T  19001576 caaatcggcaaatcaagaacat 19001597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23127993 - 23128095
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||| |||||||||| |||||||||||| ||||||||||||| | ||||||  | |||||| |||||||||  ||| |||| |||||||||||| |||    
T  23127993 ttttggaacatttgtaaggttttctatattcgagtctgtaattccattcttcccgaaacatagcaattttagggtgttcttgatgtaattcacgaagaaa 23128092  T
Q  99 tca 101  Q
    |||    
T  23128093 tca 23128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 8977574 - 8977656
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaat 87  Q
    |||| |||||||||||||||||||||||||||||||||||| | ||||  | |||||| ||||||| ||| ||||||||||||    
T  8977574 ggacttttgtaatgttttctatatttgagtctgtaattctaattttcccgaaacatagcaattttaggggattttgaagtaat 8977656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 5471837 - 5471949
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||||||||||| || |||||    |  |||| ||||||||||| |||| |||||||||| ||| ||||||||    
T  5471837 gggatatttgtaatgttttctatatttgagtctgtaattatattcttc---tcgaatagcaattttagggtcttttaaagtaattcaagaagaaatcatg 5471933  T
Q  104 tgaattggcaaagcaa 119  Q
      ||| ||||||||||    
T  5471934 caaatcggcaaagcaa 5471949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 9288908 - 9288764
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||| |||| |||||||||||||||||||||| | |||||||||| |||||   | |||||| |||||||||   ||||||| ||||||| |||| |||    
T  9288908 ttttgtgacacttgtaatgttttctatatttgattatgtaattctattcttcttgaaacatagcaattttaggatttttttgatgtaattcgcgaagaaa 9288809  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagac 143  Q
    |||||  ||| | ||||| ||||||||  | |||||| |||||||    
T  9288808 tcatgcaaatcgtcaaagtaagaacatctgaagatttgtgaagac 9288764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 21234098 - 21233960
Alignment:
Q  4 tgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||||||||||||||||||||| | |||||||| ||||||  | | |||| || ||||||  |||||||| |||| ||||| | ||||||    
T  21234098 tgggacatttgtaatgttttctatatttgagtttataattctattcttcccaaaatatagcaaatttaggatgtttttgatgtaactcacggagaaatca 21233999  T
Q  102 tgtgaattggcaaagcaagaacattcggagatttatgaag 141  Q
    ||   || || |||||||| ||||||| |||||| |||||    
T  21233998 tgcatatcggaaaagcaag-acattcgaagatttttgaag 21233960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 21707443 - 21707511
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||  | |||||| |||| ||||||    
T  21707443 gacatttgtaatgttttctatatttgaatctgtaattctattcttcctgaaacatagcaattctagggt 21707511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 4450665 - 4450543
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagta-attcacgaacaaatca 101  Q
    ||||| |||||||||||||||||||||||| || |||||||||| ||||  | |||||| |||||||  |||||||||| |||  |||||||| ||||||    
T  4450665 gggacttttgtaatgttttctatatttgagactataattctagttttcccaaaacatagcaattttagggggtttttgatgtagtttcacgaagaaatca 4450566  T
Q  102 tgtgaattggcaaagcaagaaca 124  Q
    ||  ||| | |||| ||||||||    
T  4450565 tgcaaatcgacaaatcaagaaca 4450543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 5221074 - 5221189
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagt-aattcacgaacaaatcatgtg 105  Q
    |||||||||||||||||||||||||||||| |||||||| |||||   | |||||| ||||||||| | |||||  || |||||||||| ||||||||      
T  5221074 acatttgtaatgttttctatatttgagtctataattctattcttctcgaaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatgca 5221173  T
Q  106 aattggcaaagcaaga 121  Q
     || ||||||||||||    
T  5221174 tatcggcaaagcaaga 5221189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 6039398 - 6039500
Alignment:
Q  3 ttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatc 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  ||||||  | | |||| |||||||||  | |||||| |||||||||||| || ||    
T  6039398 ttgggacatttgtaaagttttctatatttgagtctgtaattatgttcttcccgaaagatagaaattttaggatgattttgatgtaattcacgaaaaactc 6039497  T
Q  101 atg 103  Q
    |||    
T  6039498 atg 6039500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9298700 - 9298574
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||| |||| |||||||||||||||||||||| | |||||||||| |||||   | |||||| |||||||||   ||||||| ||||||| |||| |||    
T  9298700 ttttgtgacacttgtaatgttttctatatttgattatgtaattctattcttcttgaaacatagcaattttaggatttttttgatgtaattcgcgaagaaa 9298601  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  ||| | ||||| ||||||||    
T  9298600 tcatgcaaatcgtcaaagtaagaacat 9298574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 1589231 - 1589135
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||| |||| ||||||||||||| |||||||||| ||||||  | | |||| |||||||||  ||| |||| |||||||||||| ||||||    
T  1589231 gacatttgtattgttgtctatatttgagtatgtaattctattcttcccgaaatatagcaattttagggtgttcttgatgtaattcacgaagaaatca 1589135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10332402 - 10332298
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||| | ||||  | |||||  |||| ||||  |||||||| |||||||| ||| |||    
T  10332402 ttttgggacatttgtaatgttttctatattcgagcctgtagttctatttttcccgaaacatatcaattctaggatgtttttgatgtaattcatgaagaaa 10332303  T
Q  99 tcatg 103  Q
    |||||    
T  10332302 tcatg 10332298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 13287814 - 13287934
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||| |||||||||||||||| |||||||||||| ||||  | |||||| ||||| ||||  ||||| |||||||| ||||| || ||||     
T  13287814 ggacttttgtaatattttctatatttgagtttgtaattctagttttcccgaaacatagcaatttgaggggtttttttaagtaattgacgaagaagtcatt 13287913  T
Q  104 tgaattggcaaagcaagaaca 124  Q
      ||| |||||| ||||||||    
T  13287914 caaatcggcaaatcaagaaca 13287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 144966 - 144871
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||||||||||| ||||||| |  ||||||  | |||||| |||| ||||  |||||| | |||||||||||||||||||||    
T  144966 atttataatgttttctatatttgagtatgtaattatgttcttcccgaaacatagcaattgtaggatgttttttatgtaattcacgaacaaatcatg 144871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 5046939 - 5047054
Alignment:
Q  5 gggacatttgtaatgttttctatatttgag-tctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||||||||||||||||||||| | |||||||    ||||||  | |||||| |||||||| || |||||| |||||||||||| |||||||    
T  5046939 gggacatttgtaatgttttctatatttgagttatgtaatt---ttcttcccgaaacatagcaattttagagtgttttgatgtaattcacgaagaaatcat 5047035  T
Q  103 gtgaattggcaaagcaaga 121  Q
    |  ||| |||||| |||||    
T  5047036 gcaaatcggcaaatcaaga 5047054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6018356 - 6018254
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    |||| ||||||||||| |||||||||||||||||  ||||||| || | ||||  | |||||  ||||||||||  ||||||| |||||||||||| |||    
T  6018356 ttttaggacatttgtattgttttctatatttgagcatgtaattatatttttcccaaaacataacaattttagggtatttttgatgtaattcacgaagaaa 6018257  T
Q  99 tca 101  Q
    |||    
T  6018256 tca 6018254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 39270381 - 39270496
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatgtgaatt 109  Q
    ||||||||||||||||||||||||| |||||||||||| |||   | ||||   ||||||| |||  ||| |||||||||||||| ||| ||||  |||     
T  39270381 tttgtaatgttttctatatttgagtatgtaattctagttttctcaaaacatgacaattttaggggggttttaagtaattcacgaagaaaccatgcaaatc 39270480  T
Q  110 ggcaaagcaagaacat 125  Q
    |||||| |||||||||    
T  39270481 ggcaaatcaagaacat 39270496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 7399328 - 7399219
Alignment:
Q  9 catttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtga 106  Q
    |||||||||  |||||||||||||||| | ||||| || ||||||  | ||||||||||||||||  |||||||| |||||| ||||  ||||||||  |    
T  7399328 catttgtaacattttctatatttgagtttttaattatattcttcccaaaacatagtaattttagggtgtttttgatgtaattaacgacgaaatcatgcaa 7399229  T
Q  107 attggcaaag 116  Q
    || |||||||    
T  7399228 atcggcaaag 7399219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 11578743 - 11578837
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaat 99  Q
    |||| |||||||| |||| ||||||||||||| |||||||||| ||||  | |||||  ||||||| ||| ||||||||||| ||||||| ||||    
T  11578743 ggacttttgtaatattttttatatttgagtctataattctagttttcccgaaacataacaattttaggggattttgaagtaaatcacgaagaaat 11578837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 9767777 - 9767732
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttc 52  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||    
T  9767777 gacatttatattgttttctatatttgagtctgtaattctattcttc 9767732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 15611142 - 15611259
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||||| || ||||||||| ||||||||||  |||||||||| ||||||  | |||||| || ||||| || |||||  |||||||||||| ||||||||    
T  15611142 gggacagttttaatgttttttatatttgagcttgtaattctattcttcccgaaacatagcaaatttagagtgttttgttgtaattcacgaagaaatcatg 15611241  T
Q  104 tgaattggcaaagcaaga 121  Q
       |||||||||| ||||    
T  15611242 catattggcaaagaaaga 15611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1810902 - 1810850
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||| ||||||    
T  1810902 ttttgggatatttgtattattttctatatttgagtatgtaattctattcttcc 1810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 3173217 - 3173118
Alignment:
Q  28 atttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaacat 125  Q
    |||||||| |||||||||||| ||||  | |||||| ||| ||||||  ||||||||||||||||| || ||||||||  ||| ||||||  ||||||||    
T  3173217 atttgagtatgtaattctagttttcctgaaacatagcaatattagggggtttttgaagtaattcactaagaaatcatgaaaatcggcaaataaagaacat 3173118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 9722445 - 9722345
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||||| |||||||||||||||||||| | ||||  || ||||||| | |||||| |||| |||||| |||||| ||||| ||| || |||||||    
T  9722445 gggacatttgttatgttttctatatttgagtcatataataatattcttccaaaaacatagcaattatagggtgttttgatgtaatccacaaagaaatcat 9722346  T
Q  103 g 103  Q
    |    
T  9722345 g 9722345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 13280753 - 13280715
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaatt 43  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  13280753 gggacttttgtaatgttttctttatttgagtctgtaatt 13280715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2455340 - 2455294
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagt 48  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  2455340 ttttgggacatttgtaatgttttc--tatttgagtcatgtaattctagt 2455294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 9918161 - 9918124
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  9918161 gggagatttgtaatgttttctatatttgagtctctaat 9918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 9926073 - 9926036
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  9926073 gggagatttgtaatgttttctatatttgagtctctaat 9926036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 23897233 - 23897188
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtctt 51  Q
    ||||||||||||| |||| ||||||| |||||||||||||| ||||    
T  23897233 ggacatttgtaatattttttatattttagtctgtaattctattctt 23897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 1586184 - 1586148
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  1586184 ggacatttgtaatgttttctttatttgagtatgtaat 1586148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 8317193 - 8317249
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta 71  Q
    ||||||||| |||| || |||||||||||||| ||||||| | |||||| |||||||    
T  8317193 taatgttttatataatttagtctgtaattctattcttccagaaacatagcaatttta 8317249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 1e-27; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17335454 - 17335599
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||| ||| |||||||| ||||||||| |||||||||||| |||||| ||||||| |||||  |||||||  ||||||||||||||||||||||| |||    
T  17335454 ttttgagacttttgtaattttttctataattgagtctgtaactctagttttccataaacataacaattttagggggtttttgaagtaattcacgaagaaa 17335553  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |||||  ||| | |||| ||||||||| || |||||| ||||||||    
T  17335554 tcatgcaaatcgacaaatcaagaacatccgaagatttgtgaagact 17335599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 17108711 - 17108589
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||||||| |||||||||||||||||||||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| ||||||||    
T  17108711 ggacttttgtaatgttttttatatttgagtctgtaattctagttttcccgaaacatagcaattttatggggtttttgaagtaattcacgaagaaatcatg 17108612  T
Q  104 tgaattggcaaagcaagaacatt 126  Q
      ||| ||| || ||||||||||    
T  17108611 caaatcggcgaatcaagaacatt 17108589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 19603973 - 19604100
Alignment:
Q  19 gttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggcaaag 116  Q
    ||||||||||||||||||| ||||| |||| ||||  | |||||  |||||||||   |||||||||||||||||||| ||||||||  |||||| |||     
T  19603973 gttttctatatttgagtctataattatagttttcccgaaacataacaattttaggcgttttttgaagtaattcacgaagaaatcatgcaaattggaaaat 19604072  T
Q  117 caagaacattcggagatttatgaagact 144  Q
    ||||||||||||||||||| ||||||||    
T  19604073 caagaacattcggagatttttgaagact 19604100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 17711300 - 17711178
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||| ||||  | |||||| |||||||  ||| ||||||||||||||||||| |||||||    
T  17711300 gggacttttgtgatgttttctatatttgagtctttaattctagttttcccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcat 17711201  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  ||| |||||| |||||||||    
T  17711200 gcaaatcggcaaatcaagaacat 17711178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 22171736 - 22171621
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtgaatt 109  Q
    ||||||||||||||||||||||||| |||||||||||  ||||  | || ||||| ||||||||  ||||||||||||||||||| ||||||||  ||||    
T  22171736 tttgtaatgttttctatatttgagtatgtaattctagctttcccgaaacgtagtagttttagggggttttgaagtaattcacgaagaaatcatgaaaatt 22171637  T
Q  110 ggcaaagcaagaacat 125  Q
    |||||| |||||||||    
T  22171636 ggcaaatcaagaacat 22171621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 16928912 - 16928796
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||||||||||||||||||||||||||||||||| || |  | |||||| |||||||  || |||||||||||||||||||| ||||||||  |||    
T  16928912 tttgtaatgttttctatatttgagtctgtaattctagtttttccaaaacatagcaattttaagggatttttgaagtaattcacgaagaaatcatgcaaat 16928813  T
Q  109 tggcaaagcaagaacat 125  Q
     |||||  |||||||||    
T  16928812 cggcaagtcaagaacat 16928796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 15166462 - 15166340
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||| |||||||||| | ||||  | |||||| |||||||  ||||||||||||||||||||| | |||||||    
T  15166462 gggacttttgtaatgttttctatatttgagtttgtaattctaattttcccgaaacataggaattttagggggtttttgaagtaattcacggaaaaatcat 15166363  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  |||  ||||| |||||||||    
T  15166362 gcaaatcagcaaatcaagaacat 15166340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25025104 - 25025001
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||  |||| |  | |||||||||||||||||| |||| | |||||||||||| ||||    
T  25025104 ttttgggacatttgtaatgttttctatatttgagtatgtaatcctgttctttccgaaacatagtaattttagggtgtttttatgtaattcacgaagaaat 25025005  T
Q  100 catg 103  Q
    ||||    
T  25025004 catg 25025001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 9536854 - 9536982
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtctt-ccatacacatagtaattttaggg---tttttgaagtaattcacgaaca 96  Q
    |||||| || ||||||||||||||||||||||||||| ||||| || | || || || |||||| ||||||||||   |||||||||||||||||||| |    
T  9536854 ttttggaacttttgtaatgttttctatatttgagtctataattttaatttttccctaaacatagcaattttaggggggtttttgaagtaattcacgaaga 9536953  T
Q  97 aatcatgtgaattggcaaagcaagaacat 125  Q
    |||||||| |||  ||||| |||||||||    
T  9536954 aatcatgttaatcagcaaatcaagaacat 9536982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 17024793 - 17024916
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta----gggtttttgaagtaattcacgaacaaatc 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||  | |||||| ||||| |    |||||||||||||||||||| || |||||    
T  17024793 gggacatttgtaatggtttctatatttgagtctgtaattctagttttcccgaaacatagaaatttgagggggggtttttgaagtaattcacaaagaaatc 17024892  T
Q  101 atgtgaattggcaaagcaagaaca 124  Q
    |||  ||| || ||| ||||||||    
T  17024893 atgctaatcggaaaatcaagaaca 17024916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8968170 - 8968274
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaa 98  Q
    |||||| || |||||||| |||||||||||||||| |||||||||||| ||||  | | |||| ||||||||||  |||||||||||||||||||| |||    
T  8968170 ttttggtacttttgtaatattttctatatttgagtttgtaattctagttttcccgaaatatagcaattttagggattttttgaagtaattcacgaagaaa 8968269  T
Q  99 tcatg 103  Q
    |||||    
T  8968270 tcatg 8968274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 11252232 - 11252349
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatcatg 103  Q
    ||||| |||||||| |||||||||||||||||||| |||||||| || |  | |||||| ||||||| ||| ||||||||||||||||||| ||||||||    
T  11252232 gggacttttgtaatattttctatatttgagtctgtgattctagtttttccgaaacatagcaattttagggggttttgaagtaattcacgaagaaatcatg 11252331  T
Q  104 tgaattggcaaagcaaga 121  Q
      ||| |||||| |||||    
T  11252332 caaatcggcaaatcaaga 11252349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 19883615 - 19883715
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||  | |||||| |||| ||||  |||||||| |||||||||||| |||||||    
T  19883615 gggacatttgtaatgttttctatatttgagtctataattatattcttcccgaaacatagaaattatagggtgtttttgatgtaattcacgaagaaatcat 19883714  T
Q  103 g 103  Q
    |    
T  19883715 g 19883715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20828238 - 20828376
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    ||||||||||||||||||| ||||| ||||||||||||||||   ||| ||||  | |||||| |||||||||  ||| |||| |||||||||||| |||    
T  20828238 ttttgggacatttgtaatggtttctgtatttgagtctgtaatgagagttttcccgaaacatagcaattttagggcgttcttgatgtaattcacgaagaaa 20828337  T
Q  99 tcatgtgaattggcaaagcaagaacattcggagatttatg 138  Q
    |||||  ||| ||||||||||| |||| || |||||||||    
T  20828338 tcatgcaaatcggcaaagcaag-acatccgaagatttatg 20828376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 14573438 - 14573312
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    |||||||||||||||||||||||| | |||||||||| ||||||  | |||||| |||||||  | |||||||| ||||||||| || ||||||||  ||    
T  14573438 atttgtaatgttttctatatttgaatatgtaattctattcttcccgaaacatagcaattttagtgtgtttttgatgtaattcacaaagaaatcatgcaaa 14573339  T
Q  108 ttggcaaagcaagaacattcggagatt 134  Q
    | | |||||||||||||| || |||||    
T  14573338 tcgtcaaagcaagaacatccgaagatt 14573312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 7583785 - 7583703
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaat 87  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||  | |||||| ||||||| ||| ||||||||||||    
T  7583785 ggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttaggggattttgaagtaat 7583703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 18447543 - 18447660
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    |||| ||||||||| |||||||||||||||| |||||||||| |||||   | |||||  ||||||||||| |||| | |||||||||||||||||||||    
T  18447543 gggatatttgtaattttttctatatttgagtttgtaattctattcttctcgaaacataacaattttagggtgttttaatgtaattcacgaacaaatcatg 18447642  T
Q  104 tgaattggcaaagcaaga 121  Q
      ||| || |||||||||    
T  18447643 caaatcggaaaagcaaga 18447660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 5691747 - 5691652
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||  | |||||| |||||||||  ||| |||| |||||||||||| ||||||    
T  5691747 acatttgtattgttttctatatttgagtctataattctattcttcccgagacatagcaattttagggtgttcttgatgtaattcacgaagaaatca 5691652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19556638 - 19556740
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaat 99  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| | ||||  | ||||||  |||||| ||| ||||||||||||||||||| ||||    
T  19556638 ttttggaacttttgtaatgttttctatatttgagtctg-aattctaattttcccgaaacatagctattttagggggttttgaagtaattcacgaagaaat 19556736  T
Q  100 catg 103  Q
    ||||    
T  19556737 catg 19556740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 10106281 - 10106148
Alignment:
Q  13 tgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaattg 110  Q
    ||||||||||||||||||||||||||||||| |||| ||||  | |||||| |||||||  |||||||| || ||||||| ||| |||||||   ||| |    
T  10106281 tgtaatgttttctatatttgagtctgtaattatagttttcccgaaacatagcaattttagggggtttttaaaataattcatgaagaaatcatacaaatcg 10106182  T
Q  111 gcaaagcaagaacattcggagatttatgaagact 144  Q
    | ||| ||||||||| |  |||||| ||||||||    
T  10106181 gtaaatcaagaacatccaaagatttgtgaagact 10106148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 9849816 - 9849932
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||| |||| |||||||||||| ||||||| |  ||||||  | |||||| ||||||||||| |||| | |||||||||||| ||||||||  |||    
T  9849816 atttgtaaagtttcctatatttgagtatgtaattttgttcttcccgaaacatagcaattttagggtgtttttatgtaattcacgaagaaatcatgcaaat 9849915  T
Q  109 tggcaaagcaagaacat 125  Q
     |||||||||| |||||    
T  9849916 cggcaaagcaaaaacat 9849932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17434428 - 17434380
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  17434428 gggacatttgtaatgttttctatatttgggtctgtaattctattcttcc 17434380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 9053998 - 9053900
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||| |||||||||||||||||| |||| | | |||||   | |||||| ||||||||||| |||||| ||||| |||||| ||||||||    
T  9053998 ggacatttgtaatattttctatatttgagtctataatacaattcttctcgaaacatagcaattttagggtattttgatgtaatgcacgaagaaatcatg 9053900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9263449 - 9263494
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9263449 ttttgggtcatttgtaatgttttatatatttgagtctgtaattcta 9263494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18750822 - 18750749
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg 74  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||| |||   | |||||| ||||||||||    
T  18750822 ttttgggacttttgtaatgttttttatatttgagtatgtaattctagttttctcgaaacatagcaattttaggg 18750749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 22350343 - 22350440
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta-gggtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||| | || |||||||||||||||||||||| | || |  | |||||| ||||||| ||||| |||||||||||  |||||||||||    
T  22350343 gggacatttgtaatttattttatatttgagtctgtaattctattttttccgaaacatagcaattttatgggttcttgaagtaattagcgaacaaatca 22350440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23083698 - 23083597
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg-tttttgaagtaattcacgaacaaat 99  Q
    ||||||||| | ||||||||||||||||||||||| ||||| |||| ||||||  | |||||  ||||||||||  |||||  |||||||||||| ||||    
T  23083698 ttttgggacgtctgtaatgttttctatatttgagtttgtaactctattcttccccaaacatatcaattttagggagttttgttgtaattcacgaagaaat 23083599  T
Q  100 ca 101  Q
    ||    
T  23083598 ca 23083597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 12246667 - 12246767
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    |||||| ||||||||||||||||| ||||||| ||||||| || ||||||  | | |||| ||||||||||| |||||| ||||||||| || |||||||    
T  12246667 gggacacttgtaatgttttctatacttgagtcatgtaattatattcttcccgaaatatagcaattttagggtattttgatgtaattcacaaagaaatcat 12246766  T
Q  103 g 103  Q
    |    
T  12246767 g 12246767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 19919245 - 19919281
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattcta 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  19919245 atttgtaatgttttctatatttgagtctgtaattcta 19919281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 11782459 - 11782333
Alignment:
Q  20 ttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattggcaaagc 117  Q
    |||| ||||||||||||||| ||| |||| || |  | |||||  ||||||||||  |||||||||||||||||||| |||||||   ||| |||||| |    
T  11782459 ttttttatatttgagtctgtgattttagtttttccgaaacataacaattttagggggtttttgaagtaattcacgaagaaatcattcaaatcggcaaatc 11782360  T
Q  118 aagaacattcggagatttatgaagact 144  Q
    |||||||  || |||||| ||||||||    
T  11782359 aagaacaaccgaagatttgtgaagact 11782333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 10432162 - 10432050
Alignment:
Q  15 taatgttttctatatttgagtctgtaattctag-tcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatgtgaattgg 111  Q
    |||| |||||||||||||||| ||||||||||| | ||||| | |||||| ||||||||||  || ||||||||||||| ||| ||||||||  ||| ||    
T  10432162 taatattttctatatttgagtgtgtaattctagcttttcca-aaacatagcaattttaggggtttattgaagtaattcaggaagaaatcatgaaaatcgg 10432064  T
Q  112 caaagcaagaacat 125  Q
     ||| |||||||||    
T  10432063 aaaatcaagaacat 10432050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 25096294 - 25096197
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatc 100  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| || |  | | |||  |||||||  ||| ||||||||||||||||||| |||||    
T  25096294 gggacttttgtaatgttttctgtatttgagtctgtaattatagtttttctgaaaaatatcaattttaggggggttttgaagtaattcacgaagaaatc 25096197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 4617088 - 4617040
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||| ||||    
T  4617088 gggacttttgtaatgttttctatatttgagtttgtaaatctagttttcc 4617040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 10236580 - 10236486
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggtttt--tgaagtaattcacgaacaaatca 101  Q
    ||||||||||||| || |||||| |||| |||||||||| ||||||  | | |||| ||||||||||| ||  |||||||||||||||| ||||||    
T  10236580 acatttgtaatgtattttatatt-gagtttgtaattctattcttcctgaaaaatagcaattttagggtgttgttgaagtaattcacgaagaaatca 10236486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11241095 - 11241048
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagt 48  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  11241095 ttttgggacatttgtaatgttttctat-tttgagtcatgtaattctagt 11241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 13588712 - 13588612
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||||| |||||||||||||||||||| | ||||  || ||||||| | |||||| |||| |||||| |||||| ||||| ||| || |||||||    
T  13588712 gggacatttgttatgttttctatatttgagtcatataataatattcttccaaaaacatagcaattatagggtgttttgatgtaatccacaaagaaatcat 13588613  T
Q  103 g 103  Q
    |    
T  13588612 g 13588612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 15047759 - 15047691
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    |||| ||||| |||||||||||||||||||||||||| || ||||||| |  ||||| |||| ||||||    
T  15047759 gacaattgtagtgttttctatatttgagtctgtaattatattcttccagaaccatagaaattctagggt 15047691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 15106665 - 15106733
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    |||| ||||| |||||||||||||||||||||||||| || ||||||| |  ||||| |||| ||||||    
T  15106665 gacaattgtagtgttttctatatttgagtctgtaattatattcttccagaaccatagaaattctagggt 15106733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 17218523 - 17218454
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg 74  Q
    ||||| |||||| |||||||||| |||||||||||||| ||| | ||||  | |||||| ||||||||||    
T  17218523 gggacttttgtagtgttttctatctttgagtctgtaatcctaattttcccgaaacatagcaattttaggg 17218454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 17277837 - 17277741
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatca 101  Q
    ||||| ||||||||||| |||||||| || || ||||||| ||||||  | |||||| |||||||  ||||| |||||||||  |||||| ||||||    
T  17277837 gacatctgtaatgttttttatatttgtgtatgcaattctattcttcccaaaacatagcaattttagggggttcttgaagtaaaacacgaagaaatca 17277741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 4616987 - 4616939
Alignment:
Q  76 ttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaaca 124  Q
    ||||||||||||||||||| ||||||||  ||| |||||| ||||||||    
T  4616987 ttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaaca 4616939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 12836182 - 12836218
Alignment:
Q  17 atgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  12836182 atgttttctatttttgagtctgtaattctattcttcc 12836218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19547151 - 19547254
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaa 98  Q
    |||||||||| ||||||||||||||||| || |||| |||||||||||| ||||  | ||| |  |||| |||||| |||||| |||||||| ||| |||    
T  19547151 ttttgggacacttgtaatgttttctata-ttaagtcatgtaattctagttttcccgaaacaaaacaattctagggtgttttgatgtaattcaagaagaaa 19547249  T
Q  99 tcatg 103  Q
    |||||    
T  19547250 tcatg 19547254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 19003869 - 19003989
Alignment:
Q  6 ggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatg 103  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||  | |||||  |||||||  ||||||||||||||||||||||| ||||||||    
T  19003869 ggacttttgtaatgttttctatatttgagtctgtaattctagttttcccgaaacataacaattttagggggtttttgaagtaattcacgaagaaatcatg 19003968  T
Q  104 tgaattggcaaagcaagaaca 124  Q
      ||| |||||| ||||||||    
T  19003969 caaatcggcaaatcaagaaca 19003989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 20860337 - 20860212
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| |||   | |||||| |||||||  ||||||||||||||||||||||| |||    
T  20860337 ttttgggacttttgtaatattttctatatttgagtctgtaattctagttttctcgaaacatagcaattttagggggtttttgaagtaattcacgaataaa 20860238  T
Q  99 tcatgtgaattggcaaagcaagaaca 124  Q
    |||||  ||| || ||| ||||||||    
T  20860237 tcatgcaaatcggaaaatcaagaaca 20860212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17469657 - 17469778
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| |  ||||||  | |||||| |||||||||  ||||||||||||||||||||| |||    
T  17469657 ttttggaacagttgtaatgttttctatatttgagtatgtaattatgttcttcccaaaacatagcaattttaggatgtttttgaagtaattcacgaagaaa 17469756  T
Q  99 tcatgtgaattggcaaagcaag 120  Q
    |||||  ||| |||||||||||    
T  17469757 tcatgcaaataggcaaagcaag 17469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24513285 - 24513389
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||| ||||  | |||||  |||||||  ||||||||||||||||||||||| |||    
T  24513285 ttttgggacatttgtaatgttttatatatttgaatttgtaattctagttttcccgaaacatatcaattttagggggtttttgaagtaattcacgaagaaa 24513384  T
Q  99 tcatg 103  Q
    |||||    
T  24513385 tcatg 24513389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 19053095 - 19052956
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||| ||||  | |||||| |||||||  ||| ||||||||||||||||||| |||||||    
T  19053095 gggacttttgtaatgatttctatatttgactctgtaattctagttttcccaaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcat 19052996  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    |  |||  ||||| ||||||||| |  ||| |||||||||    
T  19052995 gcaaatctgcaaatcaagaacatccaaagaattatgaaga 19052956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26348433 - 26348318
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt--ttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| | | |||| |||| ||||||  |||||| |||||||||||| ||||||||      
T  26348433 acatttgtaatgttttctatatttgagtatgtaattctattcttccaaaaaaatagcaattctagggtggttttgatgtaattcacgaagaaatcatgca 26348334  T
Q  106 aattggcaaagcaaga 121  Q
    |||||| ||| |||||    
T  26348333 aattggaaaatcaaga 26348318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 24142395 - 24142281
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||| |||||||||||||||||||||||||||||| ||||  | |||||| |||||||  ||| ||||||| ||||||||||| ||||||||  |||    
T  24142395 tttgtaaagttttctatatttgagtctgtaattctagttttcccgaaacatagcaattttaggggggttttgaaataattcacgaagaaatcatggaaat 24142296  T
Q  109 tggcaaagcaagaac 123  Q
     |||||| |||||||    
T  24142295 cggcaaatcaagaac 24142281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 24263849 - 24263951
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |  | |||||| |||||||||  ||| |||| ||||||||| || |||    
T  24263849 ttttgggacatttgtaatgttttctatatttgagtctgtaattctattctttccaaaacatagcaattttagggtgttcttgatgtaattcacaaagaaa 24263948  T
Q  99 tca 101  Q
    |||    
T  24263949 tca 24263951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23387656 - 23387771
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||||||||| |||||| |||   | |||||| |||||||  ||| ||||||| ||||||||||| ||||||||  |||    
T  23387656 tttgtaatgttttctatatttgagtctgtaaatctagttttcttaaaacatagcaattttatggggcttttgaaataattcacgaagaaatcatgcaaat 23387755  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  23387756 cggcaaatcaagaaca 23387771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 34132080 - 34131941
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||| |||||||| | |||||||||||||||||| |||   | |||||| ||||||||||  |||||||||||||||||||| |||||||    
T  34132080 gggacttttgtaatattttctatgtctgagtctgtaattctagttttcacgaaacatagcaattttaggggttttttgaagtaattcacgaagaaatcat 34131981  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
       ||| | |||| ||||||||| || ||| |||||||||    
T  34131980 acaaatcgtcaaatcaagaacatccgaagaattatgaaga 34131941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19761680 - 19761783
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    ||||| |||||| |||||||||||||||||| |||||||||||||| ||||||  | |||||| ||||||||| | |||||  |||||||||||| ||||    
T  19761680 ttttgtgacattcgtaatgttttctatatttaagtctgtaattctattcttcccaaaacatagcaattttaggatgttttgttgtaattcacgaagaaat 19761779  T
Q  100 catg 103  Q
    ||||    
T  19761780 catg 19761783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 29987950 - 29987809
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||| ||||  | |||||  ||||||||||  ||||||||||| |||||||| |||||||    
T  29987950 gggacttttgtaatgttttctatattttagtatgtaattctagttttcccgaaacataacaattttaggggttttttgaagtacttcacgaagaaatcat 29987851  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaagact 144  Q
    |  ||| | |||| ||||| |||  | |||||| ||||||||    
T  29987850 gcaaatcgacaaatcaagaccatctgaagatttgtgaagact 29987809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22845894 - 22845989
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaa 94  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||| ||||||  | |||||| |||||||||  ||| |||| ||||||||||||    
T  22845894 tttttggacatttataatgttttctatatttgagtttgtaattctattcttcccaaaacatagcaattttagggtgttcttgatgtaattcacgaa 22845989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 24162117 - 24162246
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatgtg 105  Q
    |||||||||||||||||||||||||||||||||||| |  |||||   | |||||  |||||||||  |||||||| ||||||||| || ||||||||      
T  24162117 acatttgtaatgttttctatatttgagtctgtaattatgttcttctcaaaacataacaattttaggatgtttttgatgtaattcac-aaaaaatcatgca 24162215  T
Q  106 aattggcaaagcaagaacattcggagattta 136  Q
    ||||||||||||||  |||| || |||||||    
T  24162216 aattggcaaagcaaagacatccgaagattta 24162246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 24320640 - 24320725
Alignment:
Q  20 ttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||| |||||||| ||||  | |||||  |||||||||  ||||||||||||||||||||| ||||||||    
T  24320640 ttttctatatttgagtctgtcattctagttttcccgaaacatatcaattttagggtgtttttgaagtaattcacgaagaaatcatg 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 24658409 - 24658523
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg-tttttgaagtaattcacgaacaaatcatgtgaatt 109  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||  | ||| |  ||||||||||  ||||||||||||||| ||| ||||||||  |||     
T  24658409 tttgtaatgttttctatatttgagtatgtaattttagttttcccgaaacacaacaattttagggagttttgaagtaattcatgaagaaatcatgcaaatc 24658508  T
Q  110 ggcaaagcaagaaca 124  Q
    |||||| ||||||||    
T  24658509 ggcaaatcaagaaca 24658523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28666490 - 28666389
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag--ggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||  | |||||  ||||||||  ||||||| ||||||||||| || |||    
T  28666490 ttttgggacttttgtaatgttttttatatttgagtctgtaattttagttttcccgaaacatatcaattttaggaggtttttaaagtaattcacaaagaaa 28666391  T
Q  99 tc 100  Q
    ||    
T  28666390 tc 28666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16522002 - 16522128
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt---tagggtttttgaagtaattcacgaacaa 97  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||| ||||  | |||||| |||||     ||| ||||||||||||||| ||| ||    
T  16522002 ttttgggacttttgcaatgttttctatatttgaatctgtaattctagttttcccgaaacatagcaatttggaggggggttttgaagtaattcatgaagaa 16522101  T
Q  98 atcatgtgaattggcaaagcaagaaca 124  Q
    ||||||  ||| || ||| ||||||||    
T  16522102 atcatgcaaatcggaaaatcaagaaca 16522128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 19006951 - 19007074
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt--tagggt-ttttgaagtaattcacgaacaaatca 101  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||   | |||||| |||||  | |||| |||| |||||||||||||| |||| |    
T  19006951 gggacttttgtaatgttttctatatttgagtctgtaattctaattttctcaaaacatagcaatttgatggggtgttttaaagtaattcacgaagaaatta 19007050  T
Q  102 tgtgaattggcaaagcaagaacat 125  Q
    ||  ||| |||||| |||||||||    
T  19007051 tgcaaatcggcaaatcaagaacat 19007074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 20548556 - 20548694
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcat 102  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||| ||||  | |||||| | ||| ||||  |||||||||||||||||| | |||||||    
T  20548556 gggacttttgtaat-ttttctatatttgtgtctgtaattctagttttcccgaaacatagcagtttgaggggttttttgaagtaattcacggagaaatcat 20548654  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatgaaga 142  Q
    |  ||| || ||| ||||||||| || ||| || ||||||    
T  20548655 gcaaatcggaaaatcaagaacatccgaagaattgtgaaga 20548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 15199012 - 15199054
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15199012 tttgtaatgttttctatatttgagtctgtaattctagttttcc 15199054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 29799039 - 29798898
Alignment:
Q  4 tgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttt--agggtttttgaagtaattcacgaacaaatca 101  Q
    |||||||||| ||||||||||||||||||||| ||||||| || ||||||  | |||||| |||| |  ||  ||||||| |||||||||||| ||||||    
T  29799039 tgggacatttataatgttttctatatttgagtttgtaattatattcttcccaaaacatagcaattatggagtatttttgatgtaattcacgaagaaatca 29798940  T
Q  102 tgtgaattggcaaagcaagaacattcggagatttatgaagac 143  Q
    |   ||| |||||| ||| ||||| || |||||  |||||||    
T  29798939 tacaaatcggcaaaacaaaaacatccgaagattagtgaagac 29798898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 18227600 - 18227488
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    |||||||||||||| ||||||||| |||||||||||  ||||||  | || ||| ||||||||| | ||| || |||||||||||| ||||||||  |||    
T  18227600 atttgtaatgttttttatatttgactctgtaattctgttcttcccaaaacctagcaattttaggatgtttagatgtaattcacgaagaaatcatgcaaat 18227501  T
Q  109 tggcaaagcaaga 121  Q
      |||||||||||    
T  18227500 cagcaaagcaaga 18227488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 24849673 - 24849769
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggttt-ttgaagtaattcacgaacaaatcatg 103  Q
    |||||| |||| |||||||||||||||||||||||| |  ||||||  | |||||| ||||||||| ||| |||| |||||||| ||| ||||||||    
T  24849673 acatttttaatattttctatatttgagtctgtaattttgttcttccggaaacatagaaattttaggatttattgatgtaattcatgaagaaatcatg 24849769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28254889 - 28254767
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagt-ctgtaattctagtcttccatacacatagtaat--tttagggtttttgaagtaattcacgaacaa 97  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||||| | ||||  | |||||| |||  ||||| | |||||| | |||||||||| ||    
T  28254889 ttttgggacatttataatattttctatatttgagtaatgtaattctacttttcccgaaacatagcaattctttagtg-ttttgatgcaattcacgaagaa 28254791  T
Q  98 atcatgtgaattggcaaagcaaga 121  Q
    ||||||  ||||||||||||||||    
T  28254790 atcatgcaaattggcaaagcaaga 28254767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 25400839 - 25400936
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag--ggtttttgaagtaattcacgaacaaatc 100  Q
    ||||| ||||||||||||| ||||||||||| |||||||||| | ||||  | |||||| ||||||||  ||  |||||||||||||| ||| |||||    
T  25400839 gggacctttgtaatgttttatatatttgagtttgtaattctaattttcccgaaacatagcaattttaggtgggatttgaagtaattcatgaagaaatc 25400936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 26253437 - 26253363
Alignment:
Q  30 ttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||||||| |||||   | |||||| ||||||||||| |||||| |||||||||||| ||||||||    
T  26253437 ttgagtctgtaattctattcttcatcaaacatagcaattttagggtgttttgatgtaattcacgaaaaaatcatg 26253363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 18832216 - 18832179
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18832216 gggacatttgtaatgttttctatatttgagtatgtaat 18832179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 31600178 - 31600296
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg---tttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||| |||||||||||||||| ||||||   ||| ||||  | |||||| ||||||||||   ||||| | |||||| ||||| ||||||    
T  31600178 gggacatttgtaatattttctatatttgagtttgtaatcagagttttcccga-acatagcaattttagggtgtttttttatgtaatttacgaagaaatca 31600276  T
Q  102 tgtgaattggcaaagcaaga 121  Q
    ||  ||| ||||||||||||    
T  31600277 tgcaaatcggcaaagcaaga 31600296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 18939514 - 18939380
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcat 102  Q
    |||||||||||| |||||| |||||| |||| ||||||   ||| ||||  | |||||| |||||||||  ||| |||| |||||||||||| |||||||    
T  18939514 gggacatttgtagtgttttatatattagagtatgtaatcagagttttcccaaaacatagcaattttagggtgttcttgatgtaattcacgaagaaatcat 18939415  T
Q  103 gtgaattggcaaagcaagaacattcggagatttatg 138  Q
    |  ||| | ||||||||| |||| || |||||||||    
T  18939414 gcaaatcgacaaagcaag-acatccgaagatttatg 18939380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 24262058 - 24262023
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaatt 43  Q
    |||||||||||||||||||||||||||| |||||||    
T  24262058 acatttgtaatgttttctatatttgagtttgtaatt 24262023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 34488851 - 34488753
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatca 101  Q
    |||| ||||||| || ||||||||||||||| ||||||| || ||||||  | |||||| |||||||||  ||| |||| ||||||||| || ||||||    
T  34488851 gggaaatttgtattgatttctatatttgagtatgtaattgtattcttcctgaaacatagcaattttagggtgttcttgatgtaattcacaaagaaatca 34488753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 22797606 - 22797668
Alignment:
Q  78 ttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaacattcggagatttatgaa 140  Q
    ||||||||||||||||| ||||||||  ||| |||||| ||||||||| || |||||| ||||    
T  22797606 ttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatccgaagatttgtgaa 22797668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 24188890 - 24188844
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||| |||||||||||||||||||||||||  |||||||| ||||||    
T  24188890 gacaattgtaatgttttctatatttgagtcaataattctattcttcc 24188844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 26117431 - 26117361
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    ||||| || |||||||||| |||||||||||||||||||||  ||||||  | |||||| |||||| ||||    
T  26117431 gggacgttagtaatgttttttatatttgagtctgtaattctgttcttcccaaaacatagcaatttttgggt 26117361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 22797529 - 22797566
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagt 48  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  22797529 tttgtaatgttttctatatttaagtatgtaattctagt 22797566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 23266804 - 23266767
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  23266804 gggacatttgtaatgttttctatatttgactctataat 23266767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 26253483 - 26253438
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||||    
T  26253483 acatttgtaatattttctatacttgagtctataattctattcttcc 26253438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 23214935 - 23214995
Alignment:
Q  12 ttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag 72  Q
    ||||||||||||| |||||||| | |||||||||||| ||||  | |||||| ||||||||    
T  23214935 ttgtaatgttttccatatttgattatgtaattctagttttcccgaaacatagcaattttag 23214995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26315183 - 26315140
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattct 45  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||    
T  26315183 ttttgagacatttgtaatgttttctat-tttgagtttgtaattct 26315140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 92937 - 93053
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||||| |||||||||| ||||  | |||||| |||||||  ||||||||||||||||||||||| ||||||||  ||     
T  92937 tttgtaatgttttctatatttgagtctataattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaaa 93036  T
Q  109 tggcaaagcaagaacat 125  Q
    |||||||  ||||||||    
T  93037 tggcaaataaagaacat 93053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 23030 - 22908
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||  | |||||| |||| ||  | |||||||||||| |||||||| |||||||    
T  23030 gggacttttttaatgttttctatatttgagtctgtaattctagttttcccgaaacatagcaattataaggagtttttgaagtatttcacgaagaaatcat 22931  T
Q  103 gtgaattggcaaagcaagaacat 125  Q
    |  |||||||||| ||| |||||    
T  22930 gcaaattggcaaatcaaaaacat 22908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 20363 - 20475
Alignment:
Q  14 gtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaattgg 111  Q
    |||||||||||||||||||||| |||||||||||| ||||  | |||||| ||||| |  ||||||||||||||||||||||| ||||||||  ||| ||    
T  20363 gtaatgttttctatatttgagtatgtaattctagttttcccaaaacatagcaatttgagggggtttttgaagtaattcacgaagaaatcatgcaaatcgg 20462  T
Q  112 caaagcaagaaca 124  Q
    |||| ||| ||||    
T  20463 caaatcaataaca 20475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 4812 - 4697
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||||||||||||||||||||||||||| |||||| |||   | |||||| |||||||  ||| ||||||| ||||||||||| ||||||||  |||    
T  4812 tttgtaatgttttctatatttgagtctgtaaatctagttttcttaaaacatagcaattttatggggcttttgaaataattcacgaagaaatcatgcaaat 4713  T
Q  109 tggcaaagcaagaaca 124  Q
     |||||| ||||||||    
T  4712 cggcaaatcaagaaca 4697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 6441 - 6347
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttaggg--tttttgaagtaattcacgaacaaatcatg 103  Q
    ||||||||||||||||||||||||||||||| |||||| ||||  | | |||| |||| |||||  |||||||||||||||||||| ||||||||    
T  6441 tttgtaatgttttctatatttgagtctgtaactctagttttcctgaaatatagcaattatagggtttttttgaagtaattcacgaagaaatcatg 6347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5728 - 5602
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattt--tagggtttttgaagtaattcacgaacaaa 98  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||  | | | || |||||  ||||| |||| |||||||||||||| |||    
T  5728 ttttgggacttttgtaatgttttctatatttgagactgtaattctagttttcctgaaatagagcaattttataggggttttaaagtaattcacgaagaaa 5629  T
Q  99 tcatgtgaattggcaaagcaagaacat 125  Q
    |||||  ||| |||||| || ||||||    
T  5628 tcatgcaaatcggcaaatcaggaacat 5602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 10199 - 10244
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||    
T  10199 acatttgtattgttttctatatttgagtttgtaattctattcttcc 10244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 243938 - 244064
Alignment:
Q  10 atttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaa 107  Q
    |||||||||||||||||||||||| | |||||||||| ||||||  | |||||| |||||||  | |||||||| ||||||||| || ||||||||  ||    
T  243938 atttgtaatgttttctatatttgaatatgtaattctattcttcccgaaacatagcaattttagtgtgtttttgatgtaattcacaaagaaatcatgcaaa 244037  T
Q  108 ttggcaaagcaagaacattcggagatt 134  Q
    | | |||||||||||||| || |||||    
T  244038 tcgtcaaagcaagaacatccgaagatt 244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 12086 - 11988
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatcat 102  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||  | |||||| |||| |||||| ||||||  ||||| ||||| |||||||    
T  12086 gggacatttataatgttttctatatttgagtctgtaattctattcttcccaaaacatagcaattctagggtgttttgatttaatttacgaagaaatcat 11988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 41330 - 41233
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||| | ||||   |||||||||  ||| |||| |||||||||||| ||||||||    
T  41330 acatttgtaatgttttctatatttaagtctgtaattctattattccagaaacattacaattttagggtgttcttgatgtaattcacgaagaaatcatg 41233  T

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Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 21434 - 21334
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttag--ggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||| ||||  |  ||||| ||||||||  ||||||||||||||||||| || |||||||    
T  21434 gggacttttgtaatgttttctatatttgagtatacaattctagttttcccaaagcatagcaattttaggaggtttttgaagtaattcacaaagaaatcat 21335  T
Q  103 g 103  Q
    |    
T  21334 g 21334  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 95612 - 95500
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcatgtgaat 108  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||  | |||||  |||||||   | |||||||||||||||||||| ||||||||  |||    
T  95612 tttgtaaagttttctatatttgaatctgtaattctagttttcctgaaacataacaattttaagagatttttgaagtaattcacgaagaaatcatgcaaat 95513  T
Q  109 tggcaaagcaaga 121  Q
     |||||| |||||    
T  95512 cggcaaaccaaga 95500  T

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Target: scaffold0072 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 38283 - 38187
Alignment:
Q  7 gacatttgtaatgttttctatatttgagtc-tgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaatca 101  Q
    |||||||||||||||||||||||||||||| |||||||||  | ||||  | |||||  ||||||||||| |||||| |||||||||||| ||||||    
T  38283 gacatttgtaatgttttctatatttgagtcatgtaattctctttttcccgaaacataacaattttagggtgttttgatgtaattcacgaagaaatca 38187  T

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Target: scaffold0094 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12228 - 12125
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt-ttttgaagtaattcacgaacaaat 99  Q
    |||||||||||| || ||||||||||||||||||||| |||||||| ||||||  | | |||| ||||| || || |||||  |||||||||||| ||||    
T  12228 ttttgggacattagtcatgttttctatatttgagtctctaattctattcttcccaaaagatagaaatttaagcgtgttttgttgtaattcacgaagaaat 12129  T
Q  100 catg 103  Q
    ||||    
T  12128 catg 12125  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 88535 - 88657
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaa 98  Q
    |||||||||||||||| |||||||||||||| ||||||||||| || |||| |    |||||| |||||||||  ||| |||| ||||||||| || |||    
T  88535 ttttgggacatttgtattgttttctatatttcagtctgtaattatattctttccggaacatagaaattttaggatgttcttgatgtaattcacaaagaaa 88634  T
Q  99 tcatgtgaattggcaaagcaaga 121  Q
    |||||  ||| ||||| ||||||    
T  88635 tcatgcaaatcggcaatgcaaga 88657  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 182620 - 182714
Alignment:
Q  11 tttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaacaaatcatg 103  Q
    |||||||||||||||||||||||||||||||||||||| || |  | ||| |  |||||||||  ||| |||||| |||||||||| ||||||||    
T  182620 tttgtaatgttttctatatttgagtctgtaattctagtttttccgaaacacaacaattttagggagttcttgaagaaattcacgaagaaatcatg 182714  T

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Target: scaffold0386 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4969 - 5064
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagg--gtttttgaagtaattcacgaa 94  Q
    |||||| ||||||||| ||||||||||||| |||||| |||||||| | ||||  | |||||| |||||||||  ||| |||| ||||||||||||    
T  4969 ttttggaacatttgtattgttttctatattcgagtctataattctattattcccaaaacatagaaattttagggtgttcttgatgtaattcacgaa 5064  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 192116 - 192068
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  192116 gggacttttgtaatgttttctatatttgagtttgtaattctagttttcc 192068  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 201933 - 201972
Alignment:
Q  3 ttgggacatttgtaatgttttctatatttgagtctgtaat 42  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  201933 ttggtacatttgtaatgttttctatatttgagtctgtaat 201972  T

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Target: scaffold0671 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 3411 - 3290
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaatttta--gggtttttgaagtaattcacgaacaaatcat 102  Q
    ||||| ||| |||||||||||||||||||||| |||||| |||| || |  | |||||| ||||| |  ||| ||||||||||||| ||||| |||||||    
T  3411 gggacttttataatgttttctatatttgagtcagtaattttagtttttccaaaacatagcaatttgaaggggattttgaagtaattaacgaagaaatcat 3312  T
Q  103 gtgaattggcaaagcaagaaca 124  Q
    |  ||| || ||| ||||||||    
T  3311 gcaaatcggaaaatcaagaaca 3290  T

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Target: scaffold0062 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41634 - 41739
Alignment:
Q  1 ttttgggacatttgtaatgttttctatatttga--gtctgtaattctagtcttccatacacatagtaattttaggg-tttttgaagtaattcacgaacaa 97  Q
    |||||||||||||||||| ||||||||||||||   | |||||||| | |||||   | |||||| |||||||||| ||||||| |||| ||||||| ||    
T  41634 ttttgggacatttgtaatattttctatatttgaatatttgtaattcgattcttctcaaaacatagcaattttagggttttttgaggtaaatcacgaagaa 41733  T
Q  98 atcatg 103  Q
    ||||||    
T  41734 atcatg 41739  T

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Target: scaffold1017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 590 - 545
Alignment:
Q  8 acatttgtaatgttttctatatttgagtctgtaattctagtcttcc 53  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||    
T  590 acatttttaatgttttctatatttgagtcagtaattctattcttcc 545  T

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Target: scaffold0360 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 16570 - 16611
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattcta 46  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  16570 gggacatttgtaatattttctacatttgagtctgtaattcta 16611  T

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Target: scaffold0441 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 2139 - 2190
Alignment:
Q  74 gtttttgaagtaattcacgaacaaatcatgtgaattggcaaagcaagaacat 125  Q
    |||||||| |||||||||||| ||||||||| ||| ||||| ||||||||||    
T  2139 gtttttgatgtaattcacgaagaaatcatgtaaatcggcaatgcaagaacat 2190  T

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Target: scaffold0115 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 36234 - 36304
Alignment:
Q  5 gggacatttgtaatgttttctatatttgagtctgtaattctagtcttccatacacatagtaattttagggt 75  Q
    ||||||||  || |||||||||||||||||| |||||||||| ||||||  | ||| || |||||||||||    
T  36234 gggacattaatattgttttctatatttgagtatgtaattctattcttcccgaaacagagaaattttagggt 36304  T

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