View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1500_low_82 (Length: 203)

Name: NF1500_low_82
Description: NF1500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1500_low_82
NF1500_low_82
[»] chr3 (37 HSPs)
chr3 (2-197)||(12372223-12372419)
chr3 (4-84)||(12517302-12517382)
chr3 (3-84)||(19912591-19912672)
chr3 (7-84)||(34276442-34276519)
chr3 (1-84)||(18457116-18457199)
chr3 (5-82)||(819853-819930)
chr3 (5-77)||(22247010-22247081)
chr3 (5-77)||(22470414-22470486)
chr3 (1-84)||(8145257-8145340)
chr3 (3-82)||(12771209-12771288)
chr3 (3-77)||(8115306-8115380)
chr3 (3-73)||(8765685-8765755)
chr3 (3-73)||(8770575-8770645)
chr3 (20-82)||(52935540-52935602)
chr3 (5-77)||(18535783-18535855)
chr3 (5-72)||(3114726-3114793)
chr3 (5-84)||(7805755-7805834)
chr3 (7-84)||(25850953-25851030)
chr3 (11-79)||(19387869-19387937)
chr3 (28-83)||(20891651-20891706)
chr3 (11-77)||(2508731-2508797)
chr3 (3-84)||(1096766-1096846)
chr3 (3-84)||(13938851-13938932)
chr3 (3-84)||(16242199-16242279)
chr3 (7-59)||(17135107-17135159)
chr3 (28-84)||(20886904-20886960)
chr3 (20-63)||(5521551-5521594)
chr3 (28-87)||(22450485-22450544)
chr3 (7-73)||(2166051-2166116)
chr3 (4-74)||(6075984-6076054)
chr3 (1-67)||(19170163-19170229)
chr3 (5-77)||(3429236-3429308)
chr3 (1-77)||(14977815-14977891)
chr3 (28-76)||(27852616-27852664)
chr3 (28-84)||(31283908-31283964)
chr3 (41-80)||(25530740-25530779)
chr3 (5-67)||(13906605-13906667)
[»] chr6 (41 HSPs)
chr6 (1-84)||(14641641-14641724)
chr6 (5-82)||(22564556-22564633)
chr6 (4-77)||(14723696-14723769)
chr6 (3-84)||(24469809-24469890)
chr6 (5-77)||(9841032-9841104)
chr6 (1-77)||(22845863-22845939)
chr6 (3-82)||(24480035-24480114)
chr6 (7-77)||(17384038-17384108)
chr6 (3-64)||(19577562-19577623)
chr6 (1-77)||(1636643-1636718)
chr6 (5-72)||(9848176-9848243)
chr6 (5-84)||(14076409-14076488)
chr6 (3-77)||(17822035-17822110)
chr6 (5-84)||(23644322-23644401)
chr6 (7-77)||(22404266-22404336)
chr6 (20-77)||(21687141-21687198)
chr6 (5-77)||(9519745-9519817)
chr6 (5-84)||(8038055-8038134)
chr6 (7-77)||(4340679-4340749)
chr6 (1-65)||(19593999-19594064)
chr6 (1-89)||(2588305-2588393)
chr6 (4-84)||(21760412-21760492)
chr6 (29-89)||(26820897-26820957)
chr6 (28-87)||(9338980-9339039)
chr6 (29-84)||(14727171-14727226)
chr6 (30-77)||(27961252-27961299)
chr6 (3-76)||(17847791-17847864)
chr6 (5-62)||(21060431-21060488)
chr6 (5-77)||(21932487-21932560)
chr6 (30-63)||(32760007-32760040)
chr6 (4-76)||(11136930-11137002)
chr6 (2-77)||(13216316-13216392)
chr6 (5-84)||(14078050-14078130)
chr6 (29-77)||(21036967-21037015)
chr6 (3-63)||(21152517-21152577)
chr6 (5-84)||(19246289-19246368)
chr6 (1-55)||(9507304-9507358)
chr6 (3-44)||(17379495-17379536)
chr6 (47-87)||(9387603-9387643)
chr6 (5-77)||(9897880-9897951)
chr6 (28-84)||(30356299-30356355)
[»] chr1 (43 HSPs)
chr1 (8-80)||(27973319-27973391)
chr1 (3-82)||(729147-729226)
chr1 (3-84)||(21663095-21663176)
chr1 (4-82)||(12210277-12210355)
chr1 (3-77)||(15542320-15542394)
chr1 (5-84)||(22621807-22621885)
chr1 (5-84)||(26647362-26647441)
chr1 (6-84)||(14782544-14782622)
chr1 (4-74)||(15158803-15158873)
chr1 (4-77)||(18527508-18527581)
chr1 (3-84)||(18734590-18734671)
chr1 (8-84)||(21450783-21450859)
chr1 (2-67)||(16180727-16180792)
chr1 (5-77)||(15571700-15571772)
chr1 (5-77)||(16363636-16363708)
chr1 (5-77)||(28009759-28009831)
chr1 (21-77)||(33192381-33192437)
chr1 (5-84)||(16114813-16114892)
chr1 (3-77)||(22507393-22507468)
chr1 (3-84)||(18832226-18832307)
chr1 (3-84)||(22426520-22426601)
chr1 (3-84)||(25402440-25402521)
chr1 (7-84)||(35133899-35133976)
chr1 (5-77)||(24901222-24901294)
chr1 (8-84)||(26611336-26611412)
chr1 (30-77)||(14235296-14235343)
chr1 (5-84)||(22626159-22626238)
chr1 (5-63)||(12011210-12011268)
chr1 (5-78)||(21848639-21848712)
chr1 (39-87)||(7221563-7221611)
chr1 (29-77)||(11845233-11845281)
chr1 (5-77)||(27116235-27116307)
chr1 (41-84)||(15630938-15630981)
chr1 (42-77)||(24464664-24464699)
chr1 (7-77)||(22624631-22624701)
chr1 (3-44)||(9403645-9403686)
chr1 (4-77)||(18827408-18827481)
chr1 (28-77)||(25959471-25959520)
chr1 (47-84)||(26022440-26022477)
chr1 (1-77)||(16785613-16785689)
chr1 (23-67)||(17445097-17445141)
chr1 (8-44)||(26022411-26022447)
chr1 (41-77)||(27912113-27912149)
[»] chr8 (45 HSPs)
chr8 (1-76)||(13313284-13313359)
chr8 (3-84)||(20400345-20400426)
chr8 (3-82)||(15176439-15176518)
chr8 (3-82)||(17510915-17510994)
chr8 (3-77)||(19704997-19705071)
chr8 (1-87)||(24380355-24380441)
chr8 (3-89)||(24583171-24583257)
chr8 (3-84)||(23867834-23867915)
chr8 (20-84)||(30117663-30117727)
chr8 (1-75)||(24090892-24090966)
chr8 (5-84)||(14271854-14271933)
chr8 (3-82)||(18446866-18446945)
chr8 (1-84)||(19265831-19265914)
chr8 (1-84)||(24389765-24389848)
chr8 (1-72)||(24520019-24520090)
chr8 (3-84)||(29380965-29381047)
chr8 (3-84)||(29765396-29765478)
chr8 (1-77)||(18007545-18007620)
chr8 (5-77)||(22501846-22501918)
chr8 (5-84)||(4007156-4007235)
chr8 (30-77)||(21695425-21695472)
chr8 (5-75)||(34499241-34499311)
chr8 (1-82)||(17835552-17835633)
chr8 (3-84)||(28621615-28621696)
chr8 (28-74)||(15058519-15058565)
chr8 (36-77)||(13833615-13833656)
chr8 (8-84)||(24381330-24381407)
chr8 (29-82)||(24381993-24382046)
chr8 (5-74)||(24908917-24908986)
chr8 (5-74)||(24911138-24911207)
chr8 (8-84)||(17100211-17100287)
chr8 (30-77)||(5151957-5152004)
chr8 (5-84)||(5856792-5856870)
chr8 (5-77)||(6886681-6886755)
chr8 (7-74)||(7985132-7985199)
chr8 (30-77)||(15557405-15557452)
chr8 (1-84)||(21316792-21316875)
chr8 (29-84)||(24105521-24105576)
chr8 (3-74)||(26888497-26888568)
chr8 (34-84)||(25227301-25227351)
chr8 (23-77)||(28858867-28858920)
chr8 (4-77)||(28903979-28904052)
chr8 (28-84)||(6286318-6286374)
chr8 (37-77)||(17650006-17650046)
chr8 (1-77)||(19791402-19791478)
[»] chr7 (47 HSPs)
chr7 (1-84)||(26249080-26249163)
chr7 (1-77)||(5236878-5236954)
chr7 (1-77)||(8977482-8977558)
chr7 (3-77)||(18986756-18986830)
chr7 (3-77)||(19001384-19001458)
chr7 (5-84)||(14195761-14195840)
chr7 (3-77)||(4450682-4450756)
chr7 (3-77)||(11804709-11804783)
chr7 (4-77)||(8052441-8052513)
chr7 (5-77)||(10332417-10332489)
chr7 (1-77)||(23173697-23173773)
chr7 (5-84)||(9767798-9767877)
chr7 (7-77)||(3585534-3585604)
chr7 (3-77)||(9078893-9078968)
chr7 (7-77)||(2565921-2565991)
chr7 (3-65)||(39270296-39270358)
chr7 (4-77)||(13280771-13280844)
chr7 (4-84)||(2927886-2927966)
chr7 (5-65)||(10418570-10418630)
chr7 (3-77)||(10611724-10611798)
chr7 (4-77)||(3173722-3173795)
chr7 (20-89)||(3692760-3692829)
chr7 (21-82)||(3736365-3736426)
chr7 (7-84)||(19154833-19154910)
chr7 (3-84)||(19201469-19201550)
chr7 (7-84)||(20754232-20754309)
chr7 (5-77)||(144989-145060)
chr7 (5-77)||(18468351-18468423)
chr7 (23-77)||(6039309-6039363)
chr7 (1-55)||(21502863-21502917)
chr7 (28-90)||(21707336-21707398)
chr7 (7-77)||(23897255-23897325)
chr7 (28-77)||(1810940-1810989)
chr7 (8-77)||(6046543-6046612)
chr7 (28-77)||(9288946-9288995)
chr7 (28-77)||(9298738-9298787)
chr7 (28-77)||(9722477-9722526)
chr7 (5-77)||(6018371-6018443)
chr7 (30-77)||(1254708-1254754)
chr7 (19-77)||(19201334-19201392)
chr7 (5-63)||(21234116-21234174)
chr7 (30-67)||(20176131-20176168)
chr7 (5-82)||(23127901-23127978)
chr7 (5-73)||(1586204-1586272)
chr7 (29-84)||(1589276-1589332)
chr7 (41-77)||(2505892-2505928)
chr7 (47-83)||(13252713-13252749)
[»] chr4 (33 HSPs)
chr4 (3-84)||(15166479-15166560)
chr4 (1-77)||(12616723-12616799)
chr4 (1-76)||(7583801-7583876)
chr4 (3-77)||(17335367-17335441)
chr4 (1-77)||(10106304-10106380)
chr4 (20-84)||(25025134-25025198)
chr4 (1-76)||(9536768-9536843)
chr4 (3-67)||(17711317-17711381)
chr4 (4-84)||(22171760-22171840)
chr4 (18-77)||(8968083-8968142)
chr4 (5-84)||(9849712-9849791)
chr4 (3-82)||(17218540-17218618)
chr4 (1-82)||(9263357-9263438)
chr4 (4-61)||(16928936-16928993)
chr4 (5-77)||(9054018-9054090)
chr4 (1-77)||(12836082-12836158)
chr4 (5-77)||(14573462-14573533)
chr4 (5-77)||(18750837-18750909)
chr4 (1-77)||(19883524-19883600)
chr4 (3-82)||(11782503-11782582)
chr4 (29-84)||(17434471-17434526)
chr4 (4-77)||(11512038-11512111)
chr4 (3-84)||(19556546-19556625)
chr4 (23-79)||(16669731-16669787)
chr4 (28-77)||(13588744-13588793)
chr4 (29-74)||(15047804-15047849)
chr4 (29-74)||(15106575-15106620)
chr4 (21-77)||(17277874-17277930)
chr4 (5-45)||(19603901-19603941)
chr4 (1-76)||(20828152-20828227)
chr4 (3-60)||(10432189-10432246)
chr4 (4-45)||(17108730-17108771)
chr4 (21-77)||(22350252-22350308)
[»] chr2 (26 HSPs)
chr2 (5-92)||(23010040-23010127)
chr2 (1-74)||(28918197-28918270)
chr2 (5-77)||(17891744-17891816)
chr2 (5-77)||(35680112-35680184)
chr2 (4-84)||(21905738-21905818)
chr2 (3-78)||(18758312-18758387)
chr2 (1-77)||(17350987-17351063)
chr2 (30-84)||(16157089-16157143)
chr2 (3-84)||(34574524-34574606)
chr2 (3-84)||(24086311-24086392)
chr2 (4-84)||(29144646-29144727)
chr2 (7-67)||(27907544-27907604)
chr2 (3-82)||(22569065-22569144)
chr2 (5-63)||(22627397-22627455)
chr2 (3-77)||(26313189-26313263)
chr2 (3-84)||(25886196-25886277)
chr2 (1-84)||(28930283-28930367)
chr2 (5-84)||(16257873-16257952)
chr2 (3-74)||(27540280-27540351)
chr2 (20-77)||(25882582-25882639)
chr2 (28-84)||(32130704-32130760)
chr2 (28-84)||(32137917-32137973)
chr2 (28-84)||(32139339-32139395)
chr2 (5-84)||(25537569-25537648)
chr2 (28-78)||(29717368-29717419)
chr2 (3-84)||(20379297-20379378)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-76)||(4835-4908)
[»] chr5 (33 HSPs)
chr5 (3-76)||(23387560-23387633)
chr5 (1-77)||(19003777-19003853)
chr5 (5-77)||(17469570-17469642)
chr5 (4-84)||(24162016-24162096)
chr5 (1-93)||(26069258-26069350)
chr5 (1-84)||(20860348-20860431)
chr5 (3-74)||(25400753-25400824)
chr5 (4-87)||(28666504-28666587)
chr5 (5-83)||(34488870-34488948)
chr5 (1-74)||(19053110-19053183)
chr5 (5-89)||(22797420-22797504)
chr5 (3-94)||(29987967-29988059)
chr5 (5-84)||(26122395-26122474)
chr5 (3-77)||(34132097-34132171)
chr5 (5-77)||(25920844-25920916)
chr5 (6-84)||(24320526-24320605)
chr5 (5-82)||(18832235-18832312)
chr5 (31-84)||(19761586-19761639)
chr5 (29-77)||(15691305-15691353)
chr5 (5-77)||(23110208-23110280)
chr5 (29-73)||(25572494-25572538)
chr5 (9-84)||(23214830-23214905)
chr5 (29-84)||(23338928-23338983)
chr5 (28-91)||(24263748-24263811)
chr5 (6-57)||(24658332-24658383)
chr5 (5-76)||(31600088-31600159)
chr5 (2-84)||(26348452-26348534)
chr5 (20-84)||(18939548-18939612)
chr5 (28-84)||(23266852-23266908)
chr5 (1-77)||(26117446-26117522)
chr5 (47-84)||(24513201-24513238)
chr5 (37-77)||(17831739-17831778)
chr5 (30-74)||(28254929-28254973)
[»] scaffold0555 (1 HSPs)
scaffold0555 (3-80)||(6464-6541)
[»] scaffold0451 (2 HSPs)
scaffold0451 (5-77)||(10105-10177)
scaffold0451 (1-82)||(5739-5820)
[»] scaffold0386 (1 HSPs)
scaffold0386 (5-77)||(4884-4956)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-80)||(92837-92912)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-67)||(41352-41414)
[»] scaffold0043 (1 HSPs)
scaffold0043 (28-77)||(88448-88497)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-77)||(243843-243914)
[»] scaffold0019 (3 HSPs)
scaffold0019 (29-80)||(35215-35266)
scaffold0019 (28-87)||(24838-24897)
scaffold0019 (3-59)||(182541-182597)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-84)||(192135-192214)
[»] scaffold0115 (1 HSPs)
scaffold0115 (29-79)||(36141-36191)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-77)||(21449-21525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (3-84)||(23047-23128)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-58)||(95635-95690)
[»] scaffold0072 (1 HSPs)
scaffold0072 (30-84)||(38329-38383)
[»] scaffold0637 (1 HSPs)
scaffold0637 (29-61)||(7423-7455)
[»] scaffold0360 (1 HSPs)
scaffold0360 (23-67)||(16490-16533)


Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 2 - 197
Target Start/End: Complemental strand, 12372419 - 12372223
Alignment:
Q  2 tgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaaaatccttttc- 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||     
T  12372419 tgttctaatactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaattacgtaagataacctgctattaaaatccttttca 12372320  T
Q  101 aaagaatttgttgaaatcacttaatttaggaaacaagattgaaagttgaagatattttttgggttaaaccaagtagactaatgcttgaagtcatttt 197  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372319 aaagaatttgttgaaatcactaaatttaggaaaccagattgaaagttgaagatattttttgggttaaaccaagtagactaatgcttgaagtcatttt 12372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 12517302 - 12517382
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  12517302 ttctaatactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgt 12517382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 19912591 - 19912672
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  19912591 gttctaatactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgt 19912672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 34276519 - 34276442
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||    
T  34276519 taatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgt 34276442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18457199 - 18457116
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||| ||||||||  |||||||| ||||||    
T  18457199 ttgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaataacatcctaagaatagcgtaagatgacctgt 18457116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 819930 - 819853
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||  || |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  819930 tctaatactcctctattatgcttgtaaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacct 819853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 22247010 - 22247081
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  22247010 tctaatactcctctattttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaagat 22247081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 22470486 - 22470414
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||| |||||||  ||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  22470486 tctaacactcctctgttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagat 22470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8145257 - 8145340
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||| ||||||||||| ||||||||  ||||||||||||||| ||| ||||||||||||||||||| | ||||||| ||||||    
T  8145257 ttgttttaatactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgacctgt 8145340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 12771288 - 12771209
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||| || ||||||||  |||||  |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  12771288 gttctaatactcatcatttttgctgctaaaatatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacct 12771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8115380 - 8115306
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||| ||| |||||||||    
T  8115380 gttctaatactcctcctttttgctactaaaacctactcaaaataactggaaaacatgctaaaaataacgtaagat 8115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 8765685 - 8765755
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 73  Q
    ||||||||||||||| |||||||   ||||||||| ||||||||||||||||||||||||||||| |||||    
T  8765685 gttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgta 8765755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 8770575 - 8770645
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 73  Q
    ||||||||||||||| |||||||   ||||||||| ||||||||||||||||||||||||||||| |||||    
T  8770575 gttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgta 8770645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 52935602 - 52935540
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  52935602 ttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacct 52935540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 18535783 - 18535855
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||   |||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  18535783 tctaatactcctctgctttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagat 18535855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 3114793 - 3114726
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 72  Q
    |||||||||||||  ||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  3114793 tctaatactcctctgttttgctggtaaaacctactgtaaaagactgaaaaacatgctaagaataacgt 3114726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 7805755 - 7805834
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||  |||||   ||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  7805755 tctaatactcctctattttggatgtaaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgt 7805834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 25851030 - 25850953
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| ||||  |||| |||||| ||||| ||||||||||||||||||||| || |||||| ||||||    
T  25851030 taatactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataacataagatgacctgt 25850953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 19387937 - 19387869
Alignment:
Q  11 actcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataa 79  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||| ||||| ||| || ||||||||    
T  19387937 actcctctattttgctggtaaaacctactgaaaatgactgaaaaacaagctaaaaataacataagataa 19387869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 20891706 - 20891651
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctg 83  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||    
T  20891706 gtaaaacctactgaaaacgactgaaaaatatgctaagaataacgtaagatgacctg 20891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 2508797 - 2508731
Alignment:
Q  11 actcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||| ||||||| |||  |||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  2508797 actcatccttttcgctgttaaaacttactgaaaatgactgaaaaacatactaagaataacgtaagat 2508731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 1096846 - 1096766
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||| || ||||||||||||||  ||||||  ||||||||||||| |||||||||| |||||| ||||||||| ||||||    
T  1096846 gttctagtaatcctcctttttgctgctaaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgt 1096766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 13938932 - 13938851
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||| |  ||||||||||||||| ||  | || |||||||||||||| |||||| || ||||||    
T  13938932 gttctaatactcctcctttttggtgctaaaacctactgaaattgctttaacaacatgctaagaataacgtaaaatgacctgt 13938851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 16242279 - 16242199
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||| |||||| ||  |||||| |||| ||||||| ||||||| ||||||||||| ||||||||| ||||||    
T  16242279 gttctaatactccttcttttttctgctaaaac-tactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacctgt 16242199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 17135107 - 17135159
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatg 59  Q
    |||||||||||  ||||||| |||||||||||| |||||||||||||||||||    
T  17135107 taatactcctctattttgctagtaaaacctactaaaaatgactgaaaaacatg 17135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 20886904 - 20886960
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| |||||| || ||||||||||||||||||| ||||||||| ||||||    
T  20886904 gtaaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacctgt 20886960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 5521551 - 5521594
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 63  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  5521551 ttttgctggtaaaacctattgaaaatgactgaaaaacatgctaa 5521594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 22450485 - 22450544
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    |||||||||| |||||| ||||||||| |||||||||||| ||||||||| |||| ||||    
T  22450485 gtaaaacctaatgaaaacgactgaaaagcatgctaagaataacgtaagatgacctattat 22450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 2166116 - 2166051
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 73  Q
    |||||||||||||||||| |  ||||||||||||||||||||  |||||||||| |||||| |||||    
T  2166116 taatactcctcctttttgttgctaaaacctactgaaaatgac-aaaaaacatgccaagaataacgta 2166051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 6075984 - 6076054
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    |||||||||||||| ||| |||| || ||||||||||||| |||||||||||| ||  |||||| ||||||    
T  6075984 ttctaatactcctcttttgtgcttgttaaacctactgaaattgactgaaaaacgtgtaaagaataacgtaa 6076054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19170229 - 19170163
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    ||||| ||||||||||| ||||| ||  ||||||| ||||||| |||| ||||||||||||||||||    
T  19170229 ttgttttaatactcctcgttttttctgctaaaaccaactgaaattgaccgaaaaacatgctaagaat 19170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 3429308 - 3429236
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||   |||||| |||||||||||| |||  || ||||||||||| ||||||| |||||||||    
T  3429308 tctaatactcctctggtttgctggtaaaacctactaaaatagaatgaaaaacatgataagaataacgtaagat 3429236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14977815 - 14977891
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||| ||||||||||||||||||||  |||| | |||| |||   ||||||||| ||||||||||| |||||||||    
T  14977815 ttgttataatactcctcctttttgctactaaatcatactaaaataaactgaaaaatatgctaagaataacgtaagat 14977891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 27852664 - 27852616
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    |||||||||||||||||||||| ||| ||||||||| ||| ||||||||    
T  27852664 gtaaaacctactgaaaatgactaaaagacatgctaaaaataacgtaaga 27852616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 31283964 - 31283908
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| ||||||| ||||||||||| ||||||| |||| |||| ||||||    
T  31283964 gtaaaacctacttaaaatgattgaaaaacatgataagaataacgttagatgacctgt 31283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 25530779 - 25530740
Alignment:
Q  41 aaaatgactgaaaaacatgctaagaattacgtaagataac 80  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  25530779 aaaatgactgaaaaatatgctaagaataacgtaagataac 25530740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 13906667 - 13906605
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    |||||||||||||| || | || | |||||||||| ||| |||| ||||||||||||||||||    
T  13906667 tctaatactcctccattatacttgcaaaacctactaaaattgacagaaaaacatgctaagaat 13906605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 1e-30; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14641641 - 14641724
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  14641641 ttgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagataacctgt 14641724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 22564633 - 22564556
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  22564633 tctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacct 22564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14723696 - 14723769
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||||||||| |||| |||| ||||||| |||||||| |||||||||||| |||||||||    
T  14723696 ttctaatactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataacgtaagat 14723769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 24469809 - 24469890
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||   |||||||||||||||||| |||||||||| |||| ||| ||||||||| ||||||    
T  24469809 gttctaatactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgacctgt 24469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 9841032 - 9841104
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||| ||||||| |||||||||    
T  9841032 tctaatactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaataacgtaagat 9841104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22845939 - 22845863
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||||||||| |  |||||| |||||||||| ||||||||||||||||||| | |||||||||    
T  22845939 ttgttctaatactcctcctttttgttgttaaaacatactgaaaataactgaaaaacatgctaagagtaacgtaagat 22845863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 24480035 - 24480114
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||| |||||||||||||||||||   |||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||    
T  24480035 gttccaatactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacct 24480114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 17384038 - 17384108
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||| | |||||||    
T  17384038 taatactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaagat 17384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 19577623 - 19577562
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaag 64  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  19577623 gttctaatactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgctaag 19577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1636643 - 1636718
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| ||||||||||   ||||||||||| ||||| ||||||||||||||||||||| |||||||||    
T  1636643 ttgttctaatactc-tcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataacgtaagat 1636718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 9848176 - 9848243
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 72  Q
    |||||||||| |||||||||||  ||||||||||| ||||||||||||||||||| ||||||| ||||    
T  9848176 tctaatactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaataacgt 9848243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14076409 - 14076488
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| ||||||  |||| | |||||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  14076409 tctaatactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataacgtaagatgacctgt 14076488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17822110 - 17822035
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||  |||| |||| ||||||| ||| |||||||||||||||||| |||||||||    
T  17822110 gttctaatactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataacgtaagat 17822035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 23644401 - 23644322
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||   ||||||| |||||||||||| ||||  | ||||||||||||||||||| ||||||||||||||||    
T  23644401 tctaatactcctatgttttgctggtaaaacctactaaaaacaattgaaaaacatgctaagaataacgtaagataacctgt 23644322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 22404336 - 22404266
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||  ||||||||||||||| | ||||||||||||| ||||||| ||| |||||    
T  22404336 taatactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataacgaaagat 22404266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 21687198 - 21687141
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  21687198 ttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagat 21687141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 9519745 - 9519817
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||  ||||  ||||||||||| ||| ||||||||||||| ||| |||||||||    
T  9519745 tctaatactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataacgtaagat 9519817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 8038134 - 8038055
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||| ||||| ||| ||| || |||||| || ||||||||| ||||||||| ||||||||| ||||||    
T  8038134 tctaatactcctccttattgctggtataacttagtgaaaaagattgaaaaacaggctaagaataacgtaagatgacctgt 8038055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 4340679 - 4340749
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||| ||  |||||||||||||||||  ||||||||||| |||| ||| |||||||||    
T  4340679 taatactcctcctttttactgctaaaacctactgaaaatatctgaaaaacatactaaaaataacgtaagat 4340749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19594064 - 19593999
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaaga 65  Q
    |||||||||||||||||||||||||   ||||||||||||||||| |||  |||||||||||||||    
T  19594064 ttgttctaatactcctcctttttgcagctaaaacctactgaaaataactaaaaaaacatgctaaga 19593999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2588305 - 2588393
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 89  Q
    |||||||||||||| || ||| || | |||||||| | ||||||||||||||||| ||||||| ||  ||||||||| || ||||||||    
T  2588305 ttgttctaatactcatcttttatgttggtaaaaccaattgaaaatgactgaaaaatatgctaaaaacaacgtaagatgacttgttatta 2588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 21760492 - 21760412
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||| ||||||||||||||  ||||  ||| ||||||||||||||||| ||||||||||| || |||| | ||||||    
T  21760492 ttctaataatcctcctttttgctgctaaattctattgaaaatgactgaaaaatatgctaagaataacttaaggtgacctgt 21760412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 26820897 - 26820957
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 89  Q
    ||||||||| ||||||| ||||||||||||||||||| | ||||||||| |||||| ||||    
T  26820897 taaaacctaatgaaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcatta 26820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 9339039 - 9338980
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||||||||| || ||||||    
T  9339039 gtaatacctattgaaaatgactgaaaaacatgttaagaatgacgtaagatgacatgttat 9338980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 14727171 - 14727226
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||| ||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  14727171 taaaacctactaaaaatgactgaaaaacatggtaataataacgtaagatgacctgt 14727226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 27961252 - 27961299
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagat 27961299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 17847791 - 17847864
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    |||||||||||| || ||||||||  |||||| |||| ||||| ||| ||||||||||||||||| || |||||    
T  17847791 gttctaatactcttcatttttgctgctaaaacttacttaaaataactaaaaaacatgctaagaataacataaga 17847864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 21060488 - 21060431
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgcta 62  Q
    |||||||||||||  ||||| |  ||||||||| ||||||||||||||||||||||||    
T  21060488 tctaatactcctctattttggttttaaaacctattgaaaatgactgaaaaacatgcta 21060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 21932487 - 21932560
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctac-tgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||  ||||||| || ||||||||  | ||||||||||||||||| || ||||||    
T  21932487 tctaatactcctcctttttgctattaaaacccacatgaaaatgtttaaaaaacatgctaagaataacttaagat 21932560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 32760007 - 32760040
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaa 63  Q
    ||||||||||||||||||||||||||||||||||    
T  32760007 aaaacctactgaaaatgactgaaaaacatgctaa 32760040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 11136930 - 11137002
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    |||||||| ||||||||||||||  |||| |||||| |||   ||||||||||||||||||||| | ||||||    
T  11136930 ttctaataatcctcctttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataatgtaaga 11137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 13216392 - 13216316
Alignment:
Q  2 tgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa-catgctaagaattacgtaagat 77  Q
    ||||||||||||||||   |||| | | |||||||| | ||||||||||||||| |||||||||||| |||||||||    
T  13216392 tgttctaatactcctctactttgatggcaaaacctattaaaaatgactgaaaaaacatgctaagaataacgtaagat 13216316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14078050 - 14078130
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactg-aaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| ||||||  |||| ||||||| ||||| ||| |||| |||||||||||| | ||||||| ||||||    
T  14078050 tctaatactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccatgctaagaataatgtaagatgacctgt 14078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 21036967 - 21037015
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  21036967 taaaacctactaaaaataactgaaaaacatgataagaatgacgtaagat 21037015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 21152577 - 21152517
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 63  Q
    ||||||||||||||||||||||||  | || |||||| ||||| | |||||||||||||||    
T  21152577 gttctaatactcctcctttttgctgcttaatcctactaaaaataattgaaaaacatgctaa 21152517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 19246289 - 19246368
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| ||  |||||||  ||||||||||| |||  |||||||||||||||| ||||| |||| |||| ||||||    
T  19246289 tctaatactcatctattttgctgttaaaacctactaaaatagactgaaaaacatgcttagaataacgttagatgacctgt 19246368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9507358 - 9507304
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa 55  Q
    ||||||||||||||| |  || | || ||||||||||||||||||||||||||||    
T  9507358 ttgttctaatactcccctgttctactggtaaaacctactgaaaatgactgaaaaa 9507304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 17379536 - 17379495
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaa 44  Q
    |||||||||||| |||||||||||  ||||||||||||||||    
T  17379536 gttctaatactcatcctttttgcttataaaacctactgaaaa 17379495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 9387603 - 9387643
Alignment:
Q  47 actgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    ||||||||||||||||||||| ||||| ||| |||||||||    
T  9387603 actgaaaaacatgctaagaataacgtaggatgacctgttat 9387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 9897951 - 9897880
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||| |||||||  ||||| | ||||||| |||||||||||||| |||| |||||||||||  |||||||||    
T  9897951 tctaacactcctctgttttgttggtaaaac-tactgaaaatgactaaaaatcatgctaagaacgacgtaagat 9897880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 30356299 - 30356355
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| ||||||||||| ||||||||| ||||||| ||| || || ||||||    
T  30356299 gtaaaacctaatgaaaatgactaaaaaacatgttaagaataacgcaaaatgacctgt 30356355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 27973319 - 27973391
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 80  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27973319 aatactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagataac 27973391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 729147 - 729226
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  729147 gttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacct 729226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 21663176 - 21663095
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  21663176 gttctaatacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgt 21663095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 12210277 - 12210355
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  12210277 ttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacct 12210355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 15542394 - 15542320
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  15542394 gttctaatactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagat 15542320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 22621807 - 22621885
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||| |||||| | |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22621807 tctaattctcctcttctttgctggtaaa-cctactaaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 22621885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 26647441 - 26647362
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||    
T  26647441 tctaatactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgt 26647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 14782544 - 14782622
Alignment:
Q  6 ctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||| ||||||||||||||  ||||||||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  14782544 ctaatagtcctcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgt 14782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 15158873 - 15158803
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    |||||||||||||||||||||||  |||| |||||| ||||| ||||||||||||||||||||| ||||||    
T  15158873 ttctaatactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataacgtaa 15158803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 18527581 - 18527508
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||   ||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  18527581 ttctaatactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataacgtaagat 18527508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 18734671 - 18734590
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||  |||| |||||| ||    ||||||||||||||||||||| ||||||||||||||||    
T  18734671 gttctaatactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataacgtaagataacctgt 18734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 21450783 - 21450859
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||  || || |||||| ||||||    
T  21450783 aatactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaaagataacttaagatgacctgt 21450859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 16180727 - 16180792
Alignment:
Q  2 tgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    ||||||||||||||||||||||| |  ||||  ||||||||||| |||||||||||||||||||||    
T  16180727 tgttctaatactcctcctttttgttgctaaactctactgaaaataactgaaaaacatgctaagaat 16180792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 15571772 - 15571700
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||   |||||| |||||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  15571772 tctaatactcctctgctttgctagtaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagat 15571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 16363636 - 16363708
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||| | |||||| |||||||||||||||| |||||||||||| ||| |||||||||    
T  16363636 tctaatactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataacgtaagat 16363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 28009759 - 28009831
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| |||||||||||||||  |||||| ||  |||||||||||||||||||||||||||| | |||||||    
T  28009759 tctaatgctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaagat 28009831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 33192381 - 33192437
Alignment:
Q  21 tttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  33192381 tttgctggtaaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagat 33192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 16114813 - 16114892
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| ||  || |||| ||||||| | |||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  16114813 tctaatactcatctgttatgctggtaaaacatgctgaaaatgattgaaaaacatgctaagaataacgtaagataatctgt 16114892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22507468 - 22507393
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||||||||   ||||||||| ||||||| |||  ||||||||||||||||| |||||||||    
T  22507468 gttctaatactcctcctttttgccgctaaaacctaatgaaaataactaaaaaaacatgctaagaataacgtaagat 22507393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 18832226 - 18832307
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||  ||| ||||| | ||| | ||||||||||||||||||||  || |||||| ||||||    
T  18832226 gttctaatactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaagaacctaagatgacctgt 18832307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 22426601 - 22426520
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||  ||   |||||| |||   ||||||||||||||||||||| ||||||||| ||||||    
T  22426601 gttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacctgt 22426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 25402521 - 25402440
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| ||||||||  |||| |||||| |||   ||||||||||||||||||||| ||| ||||| ||||||    
T  25402521 gttctaatactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgt 25402440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 35133899 - 35133976
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| ||||| | |||||||||||| |||| |||||||||||||||||   || ||||||||| ||||||    
T  35133899 taatactcctccattttgttggtaaaacctactaaaaaagactgaaaaacatgctacagataacgtaagatgacctgt 35133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 24901222 - 24901294
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||| |||  ||||||| |||||| ||||||||||||| ||||||| ||||||| ||| |||||||||    
T  24901222 tctaatacttctctgttttgctggtaaaatctactgaaaatgattgaaaaatatgctaaaaataacgtaagat 24901294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 26611412 - 26611336
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||  |||| |||||| | | | | ||||||||||||||||||| ||||||||| ||||||    
T  26611412 aatactcctcctttttgctgctaaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgt 26611336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 14235343 - 14235296
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| ||||||||||||||||||||||||| | |||||||||    
T  14235343 aaaacctactaaaaatgactgaaaaacatgctaagagtaacgtaagat 14235296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 22626238 - 22626159
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||  ||||||| |||||| ||||| ||||  | | ||||||||||||||||| ||||||||| ||||||    
T  22626238 tctaatactcctctgttttgctggtaaaagctactaaaaaaaattcaaaaacatgctaagaataacgtaagatgacctgt 22626159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 12011268 - 12011210
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 63  Q
    |||||||||| | | ||||||| |||||||||||||||||||  |||||||||||||||    
T  12011268 tctaatactcattcgttttgctggtaaaacctactgaaaatgtgtgaaaaacatgctaa 12011210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21848639 - 21848712
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagata 78  Q
    |||||||||||||  |||||||  ||| ||||| | |||| |||||||||||||||||||||| || |||||||    
T  21848639 tctaatactcctctgttttgctaataacacctattaaaaacgactgaaaaacatgctaagaataacataagata 21848712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 7221563 - 7221611
Alignment:
Q  39 tgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    ||||||||||||||||||||| ||||||| ||||||||| || ||||||    
T  7221563 tgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgttat 7221611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 11845281 - 11845233
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  11845281 taaaacctactaaaaataactgaaaaatatgctaagaataacgtaagat 11845233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 27116307 - 27116235
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| ||| ||||  | |||||||||||| ||||||| ||||||||||| ||||||  |||||||||    
T  27116307 tctaatactcatccgtttttatggtaaaacctactaaaaatgattgaaaaacatgttaagaaaaacgtaagat 27116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 15630981 - 15630938
Alignment:
Q  41 aaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||| ||||||||||||||||| || |||||||||||||    
T  15630981 aaaatgactaaaaaacatgctaagaataacataagataacctgt 15630938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 24464664 - 24464699
Alignment:
Q  42 aaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||||||||||| |||||||||    
T  24464664 aaatgactgaaaaacatgctaagaataacgtaagat 24464699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 22624631 - 22624701
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||  |||| |||||| |||   ||| ||||||||||||||||| | |||||||    
T  22624631 taatactcctcctttttgctgctaaatcctactaaaataaacttaaaaacatgctaagaataatgtaagat 22624701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 9403645 - 9403686
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaa 44  Q
    |||||||||||||| |||||||||  ||||||||||||||||    
T  9403645 gttctaatactccttctttttgctgctaaaacctactgaaaa 9403686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 18827408 - 18827481
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| |||||| | ||  ||| ||||| | ||||| ||||||||||||| ||||||| |||||||||    
T  18827408 ttctaatactcatcctttctcctgctaagacctaattaaaataactgaaaaacatgttaagaataacgtaagat 18827481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 25959520 - 25959471
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||| |||||| |||||| |||||||| | |||||||    
T  25959520 gtaaaacctactgaaaaagactgagaaacatcctaagaataatgtaagat 25959471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 26022440 - 26022477
Alignment:
Q  47 actgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  26022440 actgaaaaacatgctaagaataacgtaagatcacctgt 26022477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16785689 - 16785613
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||| |||| || |||||||| | ||||||| | | || |||||||||| |||  ||||||||    
T  16785689 ttgttctaatactcctccgttttactggtaaaacccattgaaaattatttaagaacatgctaaaaatagcgtaagat 16785613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 17445097 - 17445141
Alignment:
Q  23 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    |||| |||||||||||| ||||| ||||||||||||| |||||||    
T  17445097 tgcttgtaaaacctactaaaaataactgaaaaacatgttaagaat 17445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 26022411 - 26022447
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaa 44  Q
    |||||||| |||||||||| |||||||||||||||||    
T  26022411 aatactccacctttttgctggtaaaacctactgaaaa 26022447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 27912113 - 27912149
Alignment:
Q  41 aaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  27912113 aaaatgactgaaaaacatgttaagaataacgtaagat 27912149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 8e-26; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13313359 - 13313284
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  13313359 ttgttctaatactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaaga 13313284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 20400345 - 20400426
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  20400345 gttctaatactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctgt 20400426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 15176518 - 15176439
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||||| ||||    
T  15176518 gttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgacct 15176439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 17510915 - 17510994
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  17510915 gttctaatactcctcctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacct 17510994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 19704997 - 19705071
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| |||| ||||  |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  19704997 gttctaatactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataacgtaagat 19705071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24380441 - 24380355
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    |||||||||||||||||  || |||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||| || ||||||    
T  24380441 ttgttctaatactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgacatgttat 24380355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 24583257 - 24583171
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 89  Q
    ||||||||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||| || ||| || |||||| ||||    
T  24583257 gttctaatactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataacataaaatgacctgtcatta 24583171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 23867915 - 23867834
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| | ||||||  ||||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||    
T  23867915 gttctaatactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacctgt 23867834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 30117727 - 30117663
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  30117727 ttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacctgt 30117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24090966 - 24090892
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 75  Q
    |||||||||||||| |||||||||||  ||||||||| | ||||| ||||||||||||||||||||| |||||||    
T  24090966 ttgttctaatactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataacgtaag 24090892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14271854 - 14271933
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||   ||||||| ||||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||    
T  14271854 tctaatactcctttgttttgctagtaaaacctactgaaaaaggttgaaaaacatgctaagaataacgtaagatgacctgt 14271933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 18446945 - 18446866
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||||||||||||  |||| ||||||| |||| ||||||||||||| ||| ||| ||||||||| ||||    
T  18446945 gttctaatactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataacgtaagatgacct 18446866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19265831 - 19265914
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||||| |  |||| |||||| |||   ||||||||||||||||||||| ||||||||| ||||||    
T  19265831 ttgttctaatactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgt 19265914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24389765 - 24389848
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||| ||| |||||| | |||||||| ||||||||| ||||||    
T  24389765 ttgttctaatactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataacgtaagatgacctgt 24389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24520090 - 24520019
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 72  Q
    |||||||||||||  |||||||||||  |||| |||||||||||| ||||||||||||||||||||| ||||    
T  24520090 ttgttctaatacttatcctttttgctactaaatcctactgaaaataactgaaaaacatgctaagaataacgt 24520019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 29381047 - 29380965
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||| |  ||||||||||||||||| ||||||||| ||||||    
T  29381047 gttctaatactcctcctttttgctactaaaacctattgaaattgaataaaaaaacatgctaagaataacgtaagatgacctgt 29380965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 29765478 - 29765396
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| | |||||||||||  ||||||||||||||||| |||  ||||||||||||||||| ||||||||| ||||||    
T  29765478 gttctaatacacttcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgt 29765396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18007545 - 18007620
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| ||| || ||||| | |||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  18007545 ttgttctaatattccaccattttgttggtaaaacctactgaaaatgactgaaaaa-atgctaacaataacgtaagat 18007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 22501846 - 22501918
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| |||||||| |||||||| || ||||||||||| ||||||| |||||||||    
T  22501846 tctaatactcctctgttttgctggtaaaaccaactgaaaaagattgaaaaacatgataagaataacgtaagat 22501918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 4007235 - 4007156
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||  ||||||| || ||||||||| ||||||||||||||||||||||| | | || |||||| ||||||    
T  4007235 tctaatactcctctattttgctggtgaaacctactaaaaatgactgaaaaacatgctaatattaacataagatgacctgt 4007156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 21695472 - 21695425
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  21695472 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagat 21695425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 34499241 - 34499311
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 75  Q
    |||||||||| ||||||||||| |||||| ||| | ||||||||||||| ||||||||| ||| |||||||    
T  34499241 tctaatactcatcctttttgctggtaaaatctaataaaaatgactgaaagacatgctaaaaataacgtaag 34499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17835552 - 17835633
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||| |  || |||| |||||||||||||||| | ||||||||| || |||||||| ||||||||| ||||    
T  17835552 ttgttctaatactccactattctgcttgtaaaacctactgaaattaactgaaaaatatactaagaataacgtaagatgacct 17835633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 28621615 - 28621696
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| | ||||||  |  ||||||||| ||||||| ||||||||||||||||||||| |||| |||| ||||||    
T  28621615 gttctaatactcattcttttttatgctaaaacctaatgaaaataactgaaaaacatgctaagaataacgttagatgacctgt 28621696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 15058565 - 15058519
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  15058565 gtaaaacctactaaaaatgactaaaaaacatgctaagaataacgtaa 15058519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 13833656 - 13833615
Alignment:
Q  36 tactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  13833656 tactgaaaatgactgaaaaacatgcaaagaataacgtaagat 13833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 24381407 - 24381330
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaatgactga-aaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||  || |||| ||||||||| |||||| ||||||| |||||||||||||||| || |||||| ||||||    
T  24381407 aatactcctctgttctgctggtaaaacctgctgaaattgactgaaaaaacatgctaagaataacttaagatgacctgt 24381330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 24382046 - 24381993
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||| ||||| ||||    
T  24382046 taaaacctactgaaaatgactaaaatacatgctaagaataacgaaagatgacct 24381993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 24908917 - 24908986
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||| |||||| || |||| |||||||||| ||||| ||| ||||||||||||||| ||| ||||||    
T  24908917 tctaatattcctccattctgcttgtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaa 24908986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 24911138 - 24911207
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||| |||||| || |||| |||||||||| ||||| ||| ||||||||||||||| ||| ||||||    
T  24911138 tctaatattcctccattctgcttgtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaa 24911207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 17100287 - 17100211
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||| ||||||||||||  ||||||||  ||||||| | ||||||||||||||||||| || | |||| ||||||    
T  17100287 aatacttctcctttttgctgctaaaaccttatgaaaataattgaaaaacatgctaagaataacttgagatgacctgt 17100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 5151957 - 5152004
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  5151957 aaaaccaactgaaaattactgaaaaacatgttaagaataacgtaagat 5152004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 5856792 - 5856870
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||| |||||  ||| ||| |||||||||||| ||||||||| ||||| ||||||||||| | |||||| |||||||    
T  5856792 tctaatattcctctatttagcttgtaaaacctactaaaaatgact-aaaaatatgctaagaataaggtaagaaaacctgt 5856870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 6886681 - 6886755
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatga--ctgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||| | |||||||||||| ||||  |  |||||||||||||||||||| |||||||||    
T  6886681 tctaatactcctctattttgatggtaaaacctactaaaaaaaagtctgaaaaacatgctaagaataacgtaagat 6886755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 7985132 - 7985199
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    |||||||||||  ||||||| |||||||||||| ||  ||||||||| ||||| ||||||| ||||||    
T  7985132 taatactcctctgttttgctggtaaaacctactaaatttgactgaaatacatgttaagaataacgtaa 7985199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 15557405 - 15557452
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||||||  |||||||| | |||||||    
T  15557405 aaaacctactgaaaatgactgaaaaacagactaagaataatgtaagat 15557452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21316792 - 21316875
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| || |||||||  | | | ||||| ||||  | ||||||||||||||||||| ||||||||| ||||||    
T  21316792 ttgttctaatactccgccattttgctgcttagaactactaaaaagaattgaaaaacatgctaagaataacgtaagatgacctgt 21316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 24105576 - 24105521
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||| |||||||| ||| |||||||||||||||||| || ||||||||| ||||||    
T  24105576 taaatcctactgagaataactgaaaaacatgctaagcataacgtaagatgacctgt 24105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 26888497 - 26888568
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    |||| ||||||||||||||||| |  ||||||||||| ||||| | ||||||| ||||||| ||| ||||||    
T  26888497 gttccaatactcctcctttttgttgctaaaacctactaaaaataaatgaaaaatatgctaaaaataacgtaa 26888568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 25227301 - 25227351
Alignment:
Q  34 cctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| |||||||||| |||||||||| | ||||||| ||||||    
T  25227301 cctactgaaaataactgaaaaacctgctaagaataatgtaagatgacctgt 25227351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 28858867 - 28858920
Alignment:
Q  23 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||| |||||||||||| |||||||||| |||||||||||||||| | |||||||    
T  28858867 tgcttgtaaaacctactaaaaatgactg-aaaacatgctaagaataatgtaagat 28858920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 28904052 - 28903979
Alignment:
Q  4 ttctaatactcctcc-tttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||  |||||| | |||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  28904052 ttctaatactcctctatttttgat-gtaaaacctactgaaaatgattgatgaacatactaagaataacgtaagat 28903979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 6286318 - 6286374
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| ||| |||  |||| ||||||||||||| ||||||||| ||||||    
T  6286318 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgt 6286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 17650006 - 17650046
Alignment:
Q  37 actgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||| |||||||||||||| ||||||| |||||||||    
T  17650006 actgaaaacgactgaaaaacatgttaagaataacgtaagat 17650046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19791402 - 19791478
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||| |||||||||||   |||||| |||||||||| | |||  ||||||||||||||||||  || |||||||||    
T  19791402 ttgttttaatactcctctggtttgctggtaaaacctattaaaatagactgaaaaacatgctaattataacgtaagat 19791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 8e-26; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26249163 - 26249080
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  26249163 ttgttctaatactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgt 26249080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5236954 - 5236878
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  5236954 ttgttctaatcctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagat 5236878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8977558 - 8977482
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  8977558 ttgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagat 8977482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18986830 - 18986756
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  18986830 gttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagat 18986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 19001458 - 19001384
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  19001458 gttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagat 19001384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14195761 - 14195840
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||| ||||||    
T  14195761 tctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacataagatcacctgt 14195840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 4450682 - 4450756
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||| ||||| |  |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  4450682 gttctaatactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataacgtaagat 4450756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 11804709 - 11804783
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| || |||| |||||||||    
T  11804709 gttctaatactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagat 11804783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 8052513 - 8052441
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  8052513 ttctaatactcctcatttttgctgctaaaacctactgaaaatgactg-aaaacatgctaagaataacgtaagat 8052441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 10332417 - 10332489
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||| ||| | || ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  10332417 tctaatactcctcttttctacttgtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagat 10332489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23173773 - 23173697
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||||||||||   ||||||||| | ||||| ||||||||||||||||||||| |||||||||    
T  23173773 ttgttctaatactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatgctaagaataacgtaagat 23173697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 9767798 - 9767877
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||  |||| || ||||||||||||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  9767798 tctaatactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagatgacctgt 9767877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 3585604 - 3585534
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  3585604 taatactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagat 3585534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 9078968 - 9078893
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactg-aaaaacatgctaagaattacgtaagat 77  Q
    |||| |||||||||||||||||||  | ||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  9078968 gttccaatactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataacgtaagat 9078893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 2565921 - 2565991
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||  |   ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  2565921 taatactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagat 2565991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 39270358 - 39270296
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaaga 65  Q
    ||||||||||||||||||||| ||  |||||| |||| |||||||||||||||||||||||||    
T  39270358 gttctaatactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgctaaga 39270296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 13280771 - 13280844
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| | |||||||||  ||||||||||||||| | | ||||||||||||||||||| |||||||||    
T  13280771 ttctaatactcgttctttttgctgctaaaacctactgaaattaattgaaaaacatgctaagaataacgtaagat 13280844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 2927886 - 2927966
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||| ||||||||  |||| |||||| |||   ||||||||||||||||||||| ||||||||| ||||||    
T  2927886 ttctaatactcctcatttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgt 2927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 10418570 - 10418630
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaaga 65  Q
    |||||||||||||  ||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10418570 tctaatactcctctgttttgctagtaaaacctactgaaaatgactaaaaaacatgttaaga 10418630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 10611724 - 10611798
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||| |||||||||||  ||||||||| | ||||| ||||| ||||||||||||||| ||| |||||    
T  10611724 gttctaatactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataacgcaagat 10611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 3173722 - 3173795
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||  ||| ||  | ||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  3173722 ttctaatactcctcccatttactgctgaaacctaatgaaaatgactgaaaaacatgctaagaataacgcaagat 3173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 3692829 - 3692760
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 89  Q
    ||||||| ||||||||||| |||||||| ||||||| |||||| |||| ||||||||| |||||| ||||    
T  3692829 ttttgctggtaaaacctacagaaaatgaatgaaaaatatgctatgaataacgtaagatgacctgtcatta 3692760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 3736365 - 3736426
Alignment:
Q  21 tttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||| ||||||||||||||||  |||| ||||||||||||||||| ||||||||| ||||    
T  3736365 tttgctggtaaaacctactgaaatagactaaaaaacatgctaagaataacgtaagatgacct 3736426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 19154833 - 19154910
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||| |||||  ||||||| || ||||||||||||||   |||||||||||||||||||| ||||||||| ||||||    
T  19154833 taatagtcctctattttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgt 19154910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 19201469 - 19201550
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||| ||| ||||||||||  |||| |||||||||||| || |||||||||| ||||||| || |||||| ||||||    
T  19201469 gttctaatagtccacctttttgctgctaaatcctactgaaaataacagaaaaacatgttaagaataacataagatgacctgt 19201550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 20754232 - 20754309
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||| |||||  ||||||| || ||||||||||||||   |||||||||||||||||||| ||||||||| ||||||    
T  20754232 taatagtcctctattttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgt 20754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 144989 - 145060
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| ||| ||||||| |||||||||||| |||||||||| |||||||| ||||||| || ||||||    
T  144989 tctaatactcatccgttttgctggtaaaacctactaaaaatgactg-aaaacatgttaagaataacataagat 145060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 18468423 - 18468351
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||| |||||||||||| | || ||||||| |||| ||| ||||||||||||||| ||||||| |||||||||    
T  18468423 tctattactcctcctttcttcttgtaaaacttactaaaattgactgaaaaacatgttaagaataacgtaagat 18468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 6039363 - 6039309
Alignment:
Q  23 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||| | |||||||    
T  6039363 tgctggtaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaagat 6039309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21502863 - 21502917
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa 55  Q
    |||||||||||||||||  ||| |||||||||||||||| |||||||| ||||||    
T  21502863 ttgttctaatactcctctgtttagctcgtaaaacctactaaaaatgaccgaaaaa 21502917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 21707398 - 21707336
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaa 90  Q
    |||||||||||| ||||||| ||||||| ||||||||||| ||||||||| || ||| |||||    
T  21707398 gtaaaacctactaaaaatgattgaaaaatatgctaagaataacgtaagatgacgtgtcattaa 21707336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 23897255 - 23897325
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||  ||||||| ||||||| |||| ||| ||||||||||||||| ||||||| | |||||||    
T  23897255 taatactcctctgttttgctggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaagat 23897325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1810940 - 1810989
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||| |||| |||||||||||||||||||||| |||| |||||||||    
T  1810940 gtaaaacttacttaaaatgactgaaaaacatgctacgaataacgtaagat 1810989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 6046543 - 6046612
Alignment:
Q  8 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||| |||  || ||| |||||||||||||| ||||||||| ||||||| || ||||||    
T  6046543 aatactcctccttttagctgctacaacttactgaaaatgactaaaaaacatgttaagaataacataagat 6046612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 9288946 - 9288995
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||| |||||||||||||||| |||||| | |||||||    
T  9288946 gtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaagat 9288995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 9298738 - 9298787
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||| |||||||||||||||| |||||| | |||||||    
T  9298738 gtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaagat 9298787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 9722477 - 9722526
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |||||||||    
T  9722477 gtaaaatctactgaaaatgattgaaaaacatgctaataataacgtaagat 9722526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 6018371 - 6018443
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||| | |||||||||||| |||  |||||||||||||||||| ||| || ||||||    
T  6018371 tctaatactcctctgttttgttggtaaaacctactaaaatcgactgaaaaacatgctaaaaataacataagat 6018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 1254754 - 1254708
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  1254754 aaaaccaactgaaaatgactgaaaaacatgctaa-aataacgtaagat 1254708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 19201392 - 19201334
Alignment:
Q  19 tttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||  |||| |||| | ||||| ||||||||||||||||||||| |||||||||    
T  19201392 tttttgctgctaaagcctaataaaaattactgaaaaacatgctaagaataacgtaagat 19201334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 21234116 - 21234174
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 63  Q
    |||||||||||||  || |||| |||||||||| | |||||||||||| ||||||||||    
T  21234116 tctaatactcctctgttatgctggtaaaacctattaaaaatgactgaataacatgctaa 21234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 20176131 - 20176168
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  20176131 aaaacatactgaaaatgactggaaaacatgctaagaat 20176168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 23127978 - 23127901
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||   |||||| |||||||||||| |||  |||||||| | ||||||| ||| ||||||||| ||||    
T  23127978 tctaatactcctctgctttgctggtaaaacctactaaaatagactgaaatatatgctaaaaataacgtaagatgacct 23127901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1586204 - 1586272
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 73  Q
    |||||| ||||||  ||||||| ||| |||||||||  || ||||| |||||||||||||||| |||||    
T  1586204 tctaatgctcctctattttgctggtataacctactggtaaagactggaaaacatgctaagaataacgta 1586272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 1589276 - 1589332
Alignment:
Q  29 taaaacctactgaaaa-tgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||| || ||||||||||||||||||||  | |||||| ||||||    
T  1589276 taaaacctactgaaaaatggctgaaaaacatgctaagaatagcataagatgacctgt 1589332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 2505892 - 2505928
Alignment:
Q  41 aaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  2505892 aaaatgactgaaaaatatgctaagaataacgtaagat 2505928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 13252749 - 13252713
Alignment:
Q  47 actgaaaaacatgctaagaattacgtaagataacctg 83  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  13252749 actgaaaaacatgctaagaataacgtaagatgacctg 13252713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 15166479 - 15166560
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  15166479 gttctaatactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgt 15166560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12616723 - 12616799
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| |||||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12616723 ttgttctaatactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaattacgtaagat 12616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7583801 - 7583876
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  7583801 ttgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaaga 7583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17335441 - 17335367
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  17335441 gttctaatactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagat 17335367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10106304 - 10106380
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||| |||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||| | |||||||    
T  10106304 ttgttgtaatactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagat 10106380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 25025134 - 25025198
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  25025134 ttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgt 25025198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9536843 - 9536768
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||| || |||||    
T  9536843 ttgttgtaatactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataacataaga 9536768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 17711317 - 17711381
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    ||||||||||||||| |||||||   ||||||||||||||||||||| |||||||||||||||||    
T  17711317 gttctaatactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaat 17711381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 22171760 - 22171840
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||||  ||||||||| |||||||  | |||||||||||||||||| | ||||||| ||||||    
T  22171760 ttctaatactcctcctttttgctgctaaaacctaatgaaaatagcagaaaaacatgctaagaataatgtaagatgacctgt 22171840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 8968142 - 8968083
Alignment:
Q  18 ctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  8968142 ctttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagat 8968083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 9849791 - 9849712
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||   ||||| | |||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||    
T  9849791 tctaatactcctttgttttgttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacctgt 9849712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 17218540 - 17218618
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||||||||||||   ||||| |||||||  ||||||||||||||||||||||| ||||||||| ||||    
T  17218540 gttctaatactcctcctttttgcttcgaaaacttactgaat-tgactgaaaaacatgctaagaataacgtaagatgacct 17218618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9263438 - 9263357
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||||||  || ||||  ||||||||| ||||  ||||||||||||||||||| ||| ||||||||||||||    
T  9263438 ttgttctaatactcctcagttctgctgataaaacctattgaatttgactgaaaaacatgctaaaaataacgtaagataacct 9263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16928936 - 16928993
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgct 61  Q
    |||||||||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  16928936 ttctaatactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatgct 16928993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 9054018 - 9054090
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| ||  || |||| ||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  9054018 tctaatactcatctattctgcttgtaaaacctactgaaaatgactgcaaaacatgctaagattaacgtaagat 9054090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12836158 - 12836082
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||   |||| || ||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  12836158 ttgttctaatactcctttattttccttgtaaaatatactaaaaatgactgaaaaacatgctaagaataacgtaagat 12836082  T

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Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 14573462 - 14573533
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  14573462 tctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagat 14573533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 18750837 - 18750909
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||||  |||| |||||||||||| ||||||||| ||||||| ||| | |||||||    
T  18750837 tctaatactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 18750909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19883600 - 19883524
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||| |   |||| | ||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  19883600 ttgttctaatactcccctgctttgttggtaaaacctactgaaaatgatcgaaaaacatactaagaattacgtaagat 19883524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 11782503 - 11782582
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||| | |||||||||   |||||||||| ||||||||| ||||||||| ||||||| ||||||||| ||||    
T  11782503 gttctaatactcttactttttgctgtaaaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacct 11782582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 17434471 - 17434526
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||    
T  17434471 taaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgt 17434526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 11512111 - 11512038
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||   ||||||| ||||||||||||| || ||||||||||||||| ||||||| || ||||||    
T  11512111 ttctaatactcctttgttttgcttgtaaaacctactgcaattgactgaaaaacatgataagaataacataagat 11512038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 19556625 - 19556546
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||| |||| ||| |  ||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||    
T  19556625 gttctaatactcc-ccttattggtgctaaaacctattgaaaatgactgaaaa-catgctaagaataacgtaagatgacctgt 19556546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 16669787 - 16669731
Alignment:
Q  23 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataa 79  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  16669787 tgcttgtaaaacctactgaaattgattgaaaaacatgctaagaataacgtcagataa 16669731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 13588744 - 13588793
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |||||||||    
T  13588744 gtaaaatctactgaaaatgattgaaaaacatgctaataataacgtaagat 13588793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 15047804 - 15047849
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15047804 taaaacctactgaaattgactgaaaaacatgccaagaataacgtaa 15047849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15106620 - 15106575
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15106620 taaaacctactgaaattgactgaaaaacatgccaagaataacgtaa 15106575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 17277874 - 17277930
Alignment:
Q  21 tttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| ||||||| |||| |||  |||||||||||||||||||||| |||||||||    
T  17277874 tttgctggtaaaacttactaaaatagactgaaaaacatgctaagaataacgtaagat 17277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 19603941 - 19603901
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaat 45  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  19603941 tctaatactcctcctttttgctactaaaacctactgaaaat 19603901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20828227 - 20828152
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    ||||| ||||||||||   |||||||  ||| ||||| |||||| |||||||||| ||||||||||| ||||||||    
T  20828227 ttgttgtaatactcctttattttgctgctaatacctattgaaaaagactgaaaaagatgctaagaataacgtaaga 20828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 10432189 - 10432246
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgc 60  Q
    ||||||||||||||| ||||||||  | ||||||| | ||||| ||||||||||||||    
T  10432189 gttctaatactcctcatttttgctgctgaaacctaattaaaataactgaaaaacatgc 10432246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 17108730 - 17108771
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaat 45  Q
    ||||||||||| |||||||||||  |||||||||||||||||    
T  17108730 ttctaatactcatcctttttgctgttaaaacctactgaaaat 17108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 22350308 - 22350252
Alignment:
Q  21 tttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||| |||||||||||| |||   ||||||||||||||||||||| | |||||||    
T  22350308 tttgctggtaaaacctactaaaataaactgaaaaacatgctaagaataatgtaagat 22350252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 23010127 - 23010040
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaaaa 92  Q
    |||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||||| ||||    
T  23010127 tctaatactccttcgttttgctggtaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagatgacttgttatcaaaa 23010040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28918197 - 28918270
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28918197 ttgttctaatactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaa 28918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 17891744 - 17891816
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  17891744 tctaatactcctctgttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagat 17891816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 35680184 - 35680112
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35680184 tctaatactcctctgttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagat 35680112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 21905738 - 21905818
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||| ||  |||||| ||| |||||||||||||||||||||||||||| || |||||| ||||||    
T  21905738 ttctaatactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataacataagatgacctgt 21905818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 18758312 - 18758387
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagata 78  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | | ||||||||||||| ||| ||||||||||    
T  18758312 gttctaatactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataacgtaagata 18758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17350987 - 17351063
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||| ||||||||| ||| ||||||| |||||||||    
T  17350987 ttgttctaatactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataacgtaagat 17351063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 16157143 - 16157089
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  16157143 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgt 16157089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 34574524 - 34574606
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||| ||| ||  ||||||||||||||||| |||  ||||||||||||||||| ||||||||| ||||||    
T  34574524 gttctaatactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgt 34574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 24086392 - 24086311
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||  |||| |||||| |||   ||||||||||||||||||||| ||||||| | ||||||    
T  24086392 gttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgacctgt 24086311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 29144646 - 29144727
Alignment:
Q  4 ttctaatactcctcctttttgctcg-taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||| |||||||||||||| | ||||||||| ||  ||||||| ||||||||||||||||| ||||||||| ||||||    
T  29144646 ttctaatattcctcctttttgcttgctaaaacctattggtaatgactaaaaaacatgctaagaataacgtaagatgacctgt 29144727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 27907604 - 27907544
Alignment:
Q  7 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    ||||||| |||||||||| |  |||||| ||||||||||||||||||||||||||||||||    
T  27907604 taatacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaat 27907544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 22569065 - 22569144
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||| ||| ||||| ||  ||||||||||||||| ||||||||||||||| ||||||| || |||||| ||||    
T  22569065 gttctaatacttctcattttttctgctaaaacctactgaaattgactgaaaaacatggtaagaataacataagatgacct 22569144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22627397 - 22627455
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 63  Q
    ||||||||||||   ||||||| |||||||||||||||||||||| |||||||||||||    
T  22627397 tctaatactcctatattttgctggtaaaacctactgaaaatgactaaaaaacatgctaa 22627455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 26313189 - 26313263
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||| | |||||||||  ||||||||||||||| ||| | ||||||||||||||||| | |||||||    
T  26313189 gttctaatactcattctttttgctgctaaaacctactgaaattgattaaaaaacatgctaagaataatgtaagat 26313263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 25886277 - 25886196
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| ||||||||  |  ||||||||| |||||||||| |||||||||| ||| ||| ||||||||| ||||||    
T  25886277 gttctaatactcttccttttttatgctaaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaagatgacctgt 25886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28930283 - 28930367
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactg-aaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||| ||||| |||||||   |||||| ||||||||||||||| |||||||||||||  || ||||||||| ||||||    
T  28930283 ttgttctaatattcctcatttttgcagctaaaacatactgaaaatgactgaaaaaacatgctaaacataacgtaagattacctgt 28930367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 16257873 - 16257952
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||| |||  ||||||| |||||| ||||| |||| |||||||||||||| ||||||| || |||||| ||||||    
T  16257873 tctaatacttctcggttttgctggtaaaatctactaaaaacgactgaaaaacatgttaagaataacataagatgacctgt 16257952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 27540351 - 27540280
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||||| ||||| |||||  |  ||||||||||||||||||||||||||| ||||||||| | ||||||    
T  27540351 gttctaatattcctcattttttatgctaaaacctactgaaaatgactgaaaaatatgctaagagtaacgtaa 27540280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25882639 - 25882582
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  25882639 ttttgctggcaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagat 25882582  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 32130760 - 32130704
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||| |||| ||||||||||| |||||| |||||||| ||||||||| ||||||    
T  32130760 gtaaaacttactaaaaatgactgataaacatactaagaataacgtaagatgacctgt 32130704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 32137973 - 32137917
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||| ||||||||||| ||||||  ||||||| ||||||||| ||||||    
T  32137973 gtaaaacctactaaaaatgactgataaacataataagaataacgtaagatgacctgt 32137917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 32139395 - 32139339
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||||||    
T  32139395 gtaaaacctgctaaaaatgactgataaacatactaagaataacgtaagatgacctgt 32139339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 25537569 - 25537648
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||| ||  ||   |||||| |||   ||||||||||||||||||||| ||||||||| ||||||    
T  25537569 tctaatactcctcctttttactgttatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgt 25537648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 29717419 - 29717368
Alignment:
Q  28 gtaaaacctactgaaaa-tgactgaaaaacatgctaagaattacgtaagata 78  Q
    ||||||||||||||||| ||| ||||||||||||||||||| || |||||||    
T  29717419 gtaaaacctactgaaaaatgattgaaaaacatgctaagaataacctaagata 29717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 20379297 - 20379378
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||||||| ||   |||||| |||   |||||||||||| |||||||| || | |||| ||||||    
T  20379297 gttctaatactcctcctttttgctcctatttcctactaaaataaactgaaaaacatcctaagaataacattagatgacctgt 20379378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 4835 - 4908
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| || |||||    
T  4835 gttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataaga 4908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 3e-22; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 23387633 - 23387560
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| || |||||    
T  23387633 gttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataaga 23387560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19003853 - 19003777
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  19003853 ttgttctaatactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataacgtaagat 19003777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 17469642 - 17469570
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  17469642 tctaatactcctctgttttgctggtaaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaagat 17469570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 24162096 - 24162016
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| |||| ||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||| || ||||||    
T  24162096 ttctaatacttctccattttgctggtaaaatctattgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctgt 24162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26069258 - 26069350
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaaaat 93  Q
    |||||||||||||||||  || |||| |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||| ||| || |||||    
T  26069258 ttgttctaatactcctctgttctgctggtaaaatctactgaaaatgactaaaaaacatgttaagaataacgtaagataacttgtcatcaaaat 26069350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20860348 - 20860431
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||| | | ||||||||| ||||||    
T  20860348 ttgttctaatacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaacagtaacgtaagatgacctgt 20860431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 25400824 - 25400753
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||||| ||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25400824 gttctaatattcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaa 25400753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 28666504 - 28666587
Alignment:
Q  4 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||| ||||||| || |||||| | |||||||    
T  28666504 ttctaatacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataacataagatgatctgttat 28666587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 34488870 - 34488948
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctg 83  Q
    |||||||||| ||  ||||||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  34488870 tctaatactcatctgttttgctggtaaatcctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctg 34488948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19053110 - 19053183
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    ||||||||||||||||||||||||||   |||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  19053110 ttgttctaatactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataacgtaa 19053183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 22797504 - 22797420
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 89  Q
    ||||||||| ||||||||||||  |||||||||  ||||||||||||||||||||| || ||| ||||||||| |||||| ||||    
T  22797504 tctaatacttctcctttttgctaataaaacctatcgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcatta 22797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 29987967 - 29988059
Alignment:
Q  3 gttctaatactcctccttttt-gctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaaaatc 94  Q
    ||||||||||||| ||||||| |||  ||||| ||||| ||||||||||||||||||||||| ||| ||||||||| |||||| || ||||||    
T  29987967 gttctaatactccaccttttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatcaaaatc 29988059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 26122395 - 26122474
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||  ||||||| |||||||||||| |||| |||| ||||||||||||||||| |  |||||||||||||    
T  26122395 tctaatactcctctgttttgctggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaagataacctgt 26122474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 34132097 - 34132171
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||| ||||||||||||  ||||||||| |||||||  |||||||||||||||||||| | |||||||    
T  34132097 gttctaatacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataaagtaagat 34132171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 25920844 - 25920916
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| ||| ||||||| ||||| |||||||||||||||  ||||| ||||||||||| |||||||||    
T  25920844 tctaatactcatccgttttgctggtaaatcctactgaaaatgacaaaaaaatatgctaagaataacgtaagat 25920916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 24320605 - 24320526
Alignment:
Q  6 ctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||| ||||||||||  ||||||||||||||||||| |  ||||||||| ||||||| ||||||||| ||||||    
T  24320605 ctaatactccgcctttttgctgctaaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgt 24320526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 18832235 - 18832312
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    |||||||||||||  ||||| | |||||||||| |||||| |||||||||||||||||| ||| | ||||||| ||||    
T  18832235 tctaatactcctctgttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaataatgtaagatgacct 18832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 19761639 - 19761586
Alignment:
Q  31 aaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  19761639 aaacctactgaaaatgactgaataacatgctaataataacgtaagatgacctgt 19761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 15691305 - 15691353
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  15691305 taaaacctactgaaaatgactaaaaaatatgctaagaataacgtaagat 15691353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 23110280 - 23110208
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  |||||||  |||||||||| || ||||||| ||||||||| ||||||| |||||||||    
T  23110280 tctaatactcctctgttttgctgttaaaacctaccgataatgactaaaaaacatgttaagaataacgtaagat 23110208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 25572538 - 25572494
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgta 73  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  25572538 taaaacctactgaaattgactgaaaaacatgctaagaataacgta 25572494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 23214905 - 23214830
Alignment:
Q  9 atactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||| |  ||||   || ||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  23214905 atactcctcctttttgttgctaaactgtattgaaaataactgaaaaacatgctaagaataacgtaagatgacctgt 23214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 23338928 - 23338983
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||| ||||||||| ||||||||||||||||||| || |||||| ||||||    
T  23338928 taaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacctgt 23338983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 24263811 - 24263748
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaaa 91  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||||||| |||| | ||||||    
T  24263811 gtaaaacctactaaaatagactgaaaaacatgctaagaataacgtaagatgacctatcattaaa 24263748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 24658383 - 24658332
Alignment:
Q  6 ctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaaca 57  Q
    |||||||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  24658383 ctaatactcctcctttttgctgctaaaacctactaaaaatgattgaaaaaca 24658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 31600159 - 31600088
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 76  Q
    |||||||||| ||  ||||| | ||||||||||| ||||| |||| ||||||||||||||||| ||||||||    
T  31600159 tctaatactcttctgttttgttggtaaaacctacggaaaaagacttaaaaacatgctaagaataacgtaaga 31600088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 26348452 - 26348534
Alignment:
Q  2 tgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||| |||||||||||  || || | |||||| |||||| ||||||||||||||||| |||||||| |||||| || ||||||    
T  26348452 tgttataatactcctctgttctgttggtaaaatctactggaaatgactgaaaaacatactaagaataacgtaaaatgacctgt 26348534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 18939548 - 18939612
Alignment:
Q  20 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||| ||||||| |||| || | |||||||||||||| ||||||| ||||||||| ||||||    
T  18939548 ttttgctggtaaaacttacttaataagactgaaaaacatgttaagaataacgtaagatgacctgt 18939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 23266852 - 23266908
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||| |||||||||| || ||| | ||||||| ||||||    
T  23266852 gtaaaacctactgaaaatgactaaaaaacatgccaaaaataatgtaagatgacctgt 23266908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26117446 - 26117522
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    ||||||||| |||| ||  || |||| ||||||||| |||||||||| | ||||||||||||||||| | |||||||    
T  26117446 ttgttctaaaactcatctcttctgcttgtaaaacctgctgaaaatgattaaaaaacatgctaagaataatgtaagat 26117522  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 24513238 - 24513201
Alignment:
Q  47 actgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  24513238 actgaaaaacatgctaagaataacgtaagatgacctgt 24513201  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 17831739 - 17831778
Alignment:
Q  37 actgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  17831739 actgaaaatg-ctgaaaaacatgctaagaataacgtaagat 17831778  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 28254929 - 28254973
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 74  Q
    |||| ||||||||||||||||||||| ||| ||||||| ||||||    
T  28254929 aaaaactactgaaaatgactgaaaaatatgttaagaataacgtaa 28254973  T

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Target: scaffold0555 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 6464 - 6541
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 80  Q
    ||||||||||||||| |||||| |  |||| |||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  6464 gttctaatactcctcatttttgttgctaaatcctattgaaaataactgaaaaacatgctaagaataacgtaagataac 6541  T

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Target: scaffold0451 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 10177 - 10105
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||| |||  ||||||||    
T  10177 tctaatactcctctgttttgctagtaaaacctactgaaaatgactgaaaagcatgctaataatagcgtaagat 10105  T

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Target: scaffold0451; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5739 - 5820
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 82  Q
    ||||||||||||||||||||||||||  |||| |||||| ||||| ||||||||||||| ||| ||| ||| ||||| ||||    
T  5739 ttgttctaatactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatgttaaaaataacgaaagatgacct 5820  T

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Target: scaffold0386 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 4956 - 4884
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||   |||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  4956 tctaatactcctctactttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagat 4884  T

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Target: scaffold0032 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 92912 - 92837
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 80  Q
    ||||||| ||||| ||||||||  |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  92912 tctaatattcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataacgtaagataac 92837  T

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Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 41352 - 41414
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    |||||||||||||  ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  41352 tctaatactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaat 41414  T

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Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 88497 - 88448
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  88497 gtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagat 88448  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 243914 - 243843
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  243914 tctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagat 243843  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 35215 - 35266
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 80  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  35215 taaaacctattgaaaatgactgaaaaacatgctaagaataacataagataac 35266  T

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Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 24838 - 24897
Alignment:
Q  28 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 87  Q
    |||||||||| | ||||||||||||||||||||||||||| || |||||| || ||||||    
T  24838 gtaaaacctattcaaaatgactgaaaaacatgctaagaataacataagatgacatgttat 24897  T

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Target: scaffold0019; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 182597 - 182541
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatg 59  Q
    ||||||||||||||||||||||||  |||| |||||| |||   |||||||||||||    
T  182597 gttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatg 182541  T

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Target: scaffold0014 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 192135 - 192214
Alignment:
Q  5 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    ||||| |||||| | |||||||  ||||||||| |||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  192135 tctaacactccttcattttgctgctaaaacctattgaaaatgactgaaaaccatgctaaaaataacgtaagatgacctgt 192214  T

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Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 36191 - 36141
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataa 79  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  36191 taaaacctattgaaaatgactgaaaaacatgataagaataacgtaagataa 36141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 21449 - 21525
Alignment:
Q  1 ttgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 77  Q
    |||||||| ||||| |||||||||||  ||||||||||||||| | ||||||||||||  |||||||  ||||||||    
T  21449 ttgttctactactcatcctttttgctgctaaaacctactgaaattaactgaaaaacatcgtaagaatatcgtaagat 21525  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 23047 - 23128
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||||||||| |  ||| ||||| | ||||| ||||||| |||||||||||||  | |||||| ||||||    
T  23047 gttctaatactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaatagcataagatgacctgt 23128  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 95635 - 95690
Alignment:
Q  3 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacat 58  Q
    ||||||||||||||| ||||||||  ||||||| | ||||| ||||||||||||||    
T  95635 gttctaatactcctcttttttgctgctaaaacccattgaaattgactgaaaaacat 95690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 38329 - 38383
Alignment:
Q  30 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 84  Q
    |||||||||||||||| ||||| |||||||||||||||  |||||| | ||||||    
T  38329 aaaacctactgaaaataactgacaaacatgctaagaatagcgtaaggtgacctgt 38383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 7423 - 7455
Alignment:
Q  29 taaaacctactgaaaatgactgaaaaacatgct 61  Q
    ||||||||||| |||||||||||||||||||||    
T  7423 taaaacctactaaaaatgactgaaaaacatgct 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 16533 - 16490
Alignment:
Q  23 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 67  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||    
T  16533 tgcttgtaaaacctactaaaaatgact-aaaaacatgctaagaat 16490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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