View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15013_low_8 (Length: 254)
Name: NF15013_low_8
Description: NF15013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15013_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 21 - 247
Target Start/End: Original strand, 43860521 - 43860747
Alignment:
| Q |
21 |
aattggcctcacttataaagtcaaatgtgagttagagtttttatatccgatgcaagctcaagcaaataaacaaaccaaagttagagtgtgattgagtgta |
120 |
Q |
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| T |
43860521 |
aattggcctcacttataaagccaaatgtgagttagagtttttatatccgatgcaagctcaagcaaataaacaaaccaaagttagagtgtgattgagtgta |
43860620 |
T |
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| Q |
121 |
caaaccaatgtaagattctttctcaactcacctcttttagttttcatgcttgtttattttttgcttctaaatgaaacaaatttcaaataaaaaatgtttt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860621 |
caaaccaatgtaagattctttctcaactcacctcttttagttttcatgcttgtttattttttgcttctaaatgaaacaaatttcaaataaaaaatgtttt |
43860720 |
T |
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| Q |
221 |
attttatggattgatttgtaacctttg |
247 |
Q |
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||||||||||||||||||||||||||| |
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| T |
43860721 |
attttatggattgatttgtaacctttg |
43860747 |
T |
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