View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15015_high_2 (Length: 409)
Name: NF15015_high_2
Description: NF15015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15015_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 14 - 318
Target Start/End: Complemental strand, 22308496 - 22308192
Alignment:
| Q |
14 |
atatatcagttataaagtaattattttaccaagaaaataaaagttataaagttgttactaaaaagtttatgcaacaaaaaagagttgcttgcatactact |
113 |
Q |
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| T |
22308496 |
atatattagttataaagtaattattttaccaagaaaataaaagttataaagttgttactaaaaagtttatgcaacaaaaaagagttgcttgcatactact |
22308397 |
T |
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| Q |
114 |
tttctttctacaaattaaactgattcattcacccttttcatccatatcttgacggttgccaaatgtgaacatgaatgatagtggaaaagaaggaatcgtg |
213 |
Q |
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| T |
22308396 |
tttctttctacaaattaaactgattcattcacccttttcatccatatcttgacggttgccaaatgtgaacatgaatgatagtggaaaagaaggaatcgtg |
22308297 |
T |
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| Q |
214 |
tgagcgatatttggaagttaaagttagaggaatattttggtagtgtgtgtgactcatgaatctaacttccttagtctataactttttcactccatggtcc |
313 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22308296 |
tgagtgatatttggaagttaaagttagaggaatattttggtagtgtgtgtgactcatgaatctaacttccttagtctataactttttcactccatggtcc |
22308197 |
T |
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| Q |
314 |
ttatt |
318 |
Q |
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||||| |
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| T |
22308196 |
ttatt |
22308192 |
T |
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