View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15016_high_5 (Length: 423)

Name: NF15016_high_5
Description: NF15016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15016_high_5
NF15016_high_5
[»] scaffold0070 (1 HSPs)
scaffold0070 (86-225)||(53111-53250)
[»] chr8 (42 HSPs)
chr8 (86-225)||(25410080-25410219)
chr8 (86-225)||(25627466-25627605)
chr8 (11-143)||(25396374-25396506)
chr8 (11-143)||(25703960-25704092)
chr8 (11-143)||(25813131-25813263)
chr8 (11-143)||(25659322-25659452)
chr8 (151-225)||(25418162-25418236)
chr8 (151-225)||(25659215-25659289)
chr8 (11-143)||(25348128-25348260)
chr8 (273-375)||(24557150-24557252)
chr8 (151-225)||(25396267-25396341)
chr8 (319-388)||(20169118-20169187)
chr8 (171-222)||(24895871-24895922)
chr8 (293-389)||(24241783-24241877)
chr8 (11-112)||(25325132-25325233)
chr8 (172-225)||(25411072-25411125)
chr8 (319-387)||(6148916-6148984)
chr8 (273-388)||(28069723-28069839)
chr8 (273-348)||(30426665-30426740)
chr8 (273-363)||(18689495-18689585)
chr8 (273-375)||(30796282-30796383)
chr8 (277-387)||(40695204-40695314)
chr8 (300-388)||(37966399-37966487)
chr8 (273-324)||(21486927-21486978)
chr8 (151-222)||(25347998-25348069)
chr8 (317-388)||(28403108-28403179)
chr8 (338-380)||(11759252-11759294)
chr8 (273-334)||(10672522-10672583)
chr8 (14-114)||(23260560-23260661)
chr8 (274-353)||(3763513-3763592)
chr8 (273-348)||(26749544-26749619)
chr8 (273-360)||(36748476-36748562)
chr8 (151-225)||(25703853-25703927)
chr8 (151-225)||(25813024-25813098)
chr8 (273-323)||(44859188-44859238)
chr8 (341-382)||(5900186-5900227)
chr8 (307-368)||(6399962-6400023)
chr8 (11-114)||(25580218-25580321)
chr8 (273-387)||(36991360-36991475)
chr8 (193-225)||(25499501-25499533)
chr8 (273-345)||(34612568-34612640)
chr8 (273-348)||(45113274-45113350)
[»] scaffold0466 (2 HSPs)
scaffold0466 (11-143)||(1420-1552)
scaffold0466 (151-223)||(1588-1660)
[»] chr2 (23 HSPs)
chr2 (288-396)||(35315521-35315628)
chr2 (284-375)||(6592422-6592513)
chr2 (320-387)||(36758818-36758885)
chr2 (273-382)||(13238685-13238795)
chr2 (273-363)||(15709772-15709862)
chr2 (273-387)||(35316829-35316944)
chr2 (273-334)||(28564896-28564957)
chr2 (273-388)||(373120-373235)
chr2 (273-348)||(374997-375072)
chr2 (319-385)||(28853099-28853165)
chr2 (273-387)||(38397085-38397199)
chr2 (274-375)||(15722239-15722340)
chr2 (319-388)||(30840935-30841004)
chr2 (277-361)||(19905889-19905973)
chr2 (331-387)||(28029927-28029983)
chr2 (294-382)||(34511987-34512075)
chr2 (273-348)||(8988859-8988934)
chr2 (273-348)||(23259483-23259558)
chr2 (273-348)||(23459842-23459917)
chr2 (296-375)||(36929743-36929822)
chr2 (275-387)||(2063359-2063472)
chr2 (273-361)||(19908784-19908871)
chr2 (274-346)||(30709115-30709187)
[»] chr4 (26 HSPs)
chr4 (273-387)||(56453777-56453891)
chr4 (273-387)||(48084482-48084596)
chr4 (273-386)||(4404294-4404409)
chr4 (273-388)||(23474115-23474230)
chr4 (273-348)||(19901914-19901989)
chr4 (273-348)||(56269072-56269147)
chr4 (273-379)||(5261120-5261226)
chr4 (319-387)||(54997565-54997633)
chr4 (273-388)||(56558283-56558399)
chr4 (317-384)||(56564838-56564905)
chr4 (276-387)||(23610649-23610761)
chr4 (273-387)||(3952126-3952241)
chr4 (273-348)||(5524451-5524526)
chr4 (273-348)||(33247126-33247201)
chr4 (273-348)||(34778425-34778500)
chr4 (336-387)||(46804690-46804741)
chr4 (340-382)||(9608031-9608073)
chr4 (273-348)||(1015850-1015925)
chr4 (273-387)||(5416422-5416536)
chr4 (273-348)||(30567905-30567980)
chr4 (273-348)||(36688184-36688259)
chr4 (273-363)||(1871281-1871371)
chr4 (293-387)||(48914475-48914569)
chr4 (352-385)||(17080895-17080928)
chr4 (317-358)||(23119308-23119349)
chr4 (351-387)||(10565111-10565147)
[»] chr5 (26 HSPs)
chr5 (276-385)||(27428840-27428949)
chr5 (293-385)||(17247430-17247522)
chr5 (273-387)||(10361971-10362085)
chr5 (273-387)||(31156551-31156664)
chr5 (273-348)||(40753158-40753233)
chr5 (289-363)||(3057135-3057209)
chr5 (273-387)||(29340999-29341113)
chr5 (273-348)||(4895731-4895806)
chr5 (273-348)||(11775797-11775872)
chr5 (273-387)||(18625377-18625492)
chr5 (273-387)||(34827196-34827311)
chr5 (273-348)||(35660605-35660680)
chr5 (273-395)||(37266735-37266858)
chr5 (284-363)||(18653376-18653455)
chr5 (273-342)||(14349807-14349876)
chr5 (317-382)||(19179513-19179578)
chr5 (273-348)||(36290606-36290681)
chr5 (317-387)||(27721179-27721249)
chr5 (319-385)||(31546763-31546829)
chr5 (273-388)||(13032122-13032238)
chr5 (330-382)||(28043477-28043529)
chr5 (273-349)||(31653039-31653115)
chr5 (273-327)||(4592804-4592858)
chr5 (273-387)||(35650322-35650436)
chr5 (273-342)||(39902419-39902488)
chr5 (273-305)||(28142814-28142846)
[»] chr3 (23 HSPs)
chr3 (273-382)||(51982547-51982656)
chr3 (330-382)||(28792010-28792062)
chr3 (320-387)||(3009272-3009339)
chr3 (273-387)||(43719903-43720018)
chr3 (273-391)||(54911658-54911775)
chr3 (273-328)||(19830447-19830502)
chr3 (273-387)||(27033655-27033770)
chr3 (274-387)||(28229359-28229472)
chr3 (273-382)||(47914129-47914238)
chr3 (276-348)||(40851781-40851853)
chr3 (284-363)||(550797-550876)
chr3 (273-348)||(31523664-31523739)
chr3 (273-348)||(34373835-34373910)
chr3 (320-385)||(37323931-37323996)
chr3 (293-342)||(46167417-46167466)
chr3 (273-348)||(2229987-2230062)
chr3 (273-348)||(12402970-12403045)
chr3 (273-348)||(49679266-49679341)
chr3 (316-387)||(52963783-52963854)
chr3 (284-385)||(566732-566834)
chr3 (307-380)||(30235418-30235491)
chr3 (352-388)||(778850-778886)
chr3 (319-375)||(36354232-36354288)
[»] chr1 (19 HSPs)
chr1 (307-388)||(27982090-27982171)
chr1 (336-388)||(35534983-35535035)
chr1 (273-392)||(50484390-50484510)
chr1 (273-328)||(12380926-12380981)
chr1 (273-328)||(12384993-12385048)
chr1 (273-348)||(30077640-30077715)
chr1 (317-382)||(10776146-10776211)
chr1 (317-382)||(33441581-33441646)
chr1 (305-362)||(40808491-40808548)
chr1 (273-388)||(39426214-39426330)
chr1 (273-388)||(48327109-48327224)
chr1 (273-388)||(50294018-50294134)
chr1 (273-342)||(12151771-12151840)
chr1 (273-348)||(52280035-52280110)
chr1 (273-375)||(46045691-46045793)
chr1 (273-334)||(24413292-24413353)
chr1 (273-314)||(26768899-26768940)
chr1 (273-348)||(18976300-18976376)
chr1 (319-371)||(26768966-26769018)
[»] chr7 (32 HSPs)
chr7 (273-363)||(32915960-32916050)
chr7 (319-388)||(44390828-44390897)
chr7 (307-387)||(35207491-35207571)
chr7 (273-382)||(7712329-7712438)
chr7 (319-388)||(48205602-48205671)
chr7 (273-388)||(18198260-18198376)
chr7 (273-387)||(9559010-9559125)
chr7 (273-342)||(25084730-25084799)
chr7 (273-388)||(4888471-4888587)
chr7 (273-348)||(12139330-12139406)
chr7 (326-382)||(27117444-27117500)
chr7 (273-348)||(989133-989208)
chr7 (273-372)||(8149613-8149712)
chr7 (273-348)||(47799896-47799971)
chr7 (296-371)||(48831165-48831240)
chr7 (273-388)||(33450510-33450627)
chr7 (317-382)||(40143552-40143617)
chr7 (273-388)||(16366522-16366638)
chr7 (273-348)||(47226072-47226145)
chr7 (318-382)||(47271109-47271173)
chr7 (273-348)||(7362572-7362647)
chr7 (347-382)||(8014632-8014667)
chr7 (348-387)||(18803298-18803337)
chr7 (273-387)||(21151156-21151271)
chr7 (273-387)||(32916173-32916287)
chr7 (273-334)||(676032-676093)
chr7 (341-382)||(8608099-8608140)
chr7 (352-380)||(1193664-1193692)
chr7 (347-387)||(6882035-6882075)
chr7 (294-346)||(29844316-29844368)
chr7 (319-363)||(33608857-33608901)
chr7 (273-348)||(34985941-34986017)
[»] chr6 (20 HSPs)
chr6 (273-387)||(32253988-32254102)
chr6 (310-387)||(30460504-30460581)
chr6 (273-388)||(21159324-21159440)
chr6 (273-342)||(4804452-4804521)
chr6 (307-375)||(20228473-20228541)
chr6 (307-375)||(22122457-22122525)
chr6 (273-387)||(7162088-7162203)
chr6 (273-348)||(24484883-24484958)
chr6 (273-339)||(27826542-27826608)
chr6 (317-388)||(11180384-11180455)
chr6 (273-387)||(12412641-12412756)
chr6 (273-342)||(17944166-17944235)
chr6 (273-326)||(29698167-29698220)
chr6 (346-382)||(4048547-4048583)
chr6 (273-348)||(13888518-13888594)
chr6 (273-348)||(2142289-2142364)
chr6 (320-387)||(30460875-30460942)
chr6 (273-388)||(7215807-7215923)
chr6 (273-346)||(2800609-2800682)
chr6 (293-349)||(17828563-17828619)
[»] scaffold0012 (1 HSPs)
scaffold0012 (273-388)||(208067-208183)
[»] scaffold0062 (2 HSPs)
scaffold0062 (273-363)||(58684-58774)
scaffold0062 (274-375)||(70796-70897)
[»] scaffold0250 (1 HSPs)
scaffold0250 (273-348)||(7151-7226)
[»] scaffold0035 (1 HSPs)
scaffold0035 (273-348)||(16393-16468)
[»] scaffold0121 (1 HSPs)
scaffold0121 (273-380)||(29533-29640)
[»] scaffold0008 (1 HSPs)
scaffold0008 (273-387)||(9157-9272)
[»] scaffold0830 (1 HSPs)
scaffold0830 (11-107)||(463-559)
[»] scaffold0126 (1 HSPs)
scaffold0126 (285-387)||(22399-22501)
[»] scaffold0252 (1 HSPs)
scaffold0252 (317-385)||(10433-10501)


Alignment Details
Target: scaffold0070 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 53111 - 53250
Alignment:
Q  86 aggtaaaatattttcattgacaacattgtctgtttattatattggtttctctatagtagtatatgtttaaggatgaaagtgtccatgttttgcgaaatcc 185  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  53111 aggtaagattttttcattgacaacattgtctgtttattatactggtttctctatagtagtatatgtttaatgatgaaagtgtccaggttttgcgaaatcc 53210  T
Q  186 gtatttctaagattttatttaagattggccgcaatcccct 225  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  53211 gtatttctgagatttaatttaagattggccgcaatcccct 53250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 6e-47; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 25410219 - 25410080
Alignment:
Q  86 aggtaaaatattttcattgacaacattgtctgtttattatattggtttctctatagtagtatatgtttaaggatgaaagtgtccatgttttgcgaaatcc 185  Q
    |||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  25410219 aggtaagattttttcattggcaacattgtctgtttattatactggtttctctatagtagtatatgtttaatgatgaaagtgtccaggttttgcgaaatcc 25410120  T
Q  186 gtatttctaagattttatttaagattggccgcaatcccct 225  Q
     ||||| | |||||| ||||||||||||||| ||||||||    
T  25410119 atatttatgagatttaatttaagattggccgaaatcccct 25410080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 25627605 - 25627466
Alignment:
Q  86 aggtaaaatattttcattgacaacattgtctgtttattatattggtttctctatagtagtatatgtttaaggatgaaagtgtccatgttttgcgaaatcc 185  Q
    |||||| || ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  25627605 aggtaagattttttcattgacaacatattctgtttattataatggtttctctatagtagtatatgtttaatgatgaaagtgtccaggttttgcgaaatcc 25627506  T
Q  186 gtatttctaagattttatttaagattggccgcaatcccct 225  Q
    |||||||| |||||| |||||||||||||  |||||||||    
T  25627505 gtatttctgagatttaatttaagattggcaacaatcccct 25627466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 25396506 - 25396374
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||   ||| |||||||||||||| |||||||||| |  |||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  25396506 caaaggacccatgctgaatggcatccgatacatgaacaaacttcaacaactatatcttattggcaacaacttggagggtaagatattttcattgacaaca 25396407  T
Q  111 ttgtctgtttattatattggtttctctatagta 143  Q
    |||||||||| ||||| | ||||||||||||||    
T  25396406 ttgtctgtttgttatacttgtttctctatagta 25396374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 25704092 - 25703960
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||||| || |||||||  ||||||||||||||||    ||| |||||| ||||||||||| || ||||| ||||||||| ||||||||    
T  25704092 caaaggacccatgccaggtggcatccgaagcatgaccaaacttcaacgactatttcttatgggcaacaacttggagggtaagatattttcactgacaaca 25703993  T
Q  111 ttgtctgtttattatattggtttctctatagta 143  Q
    |||||||||| ||||| | ||||||||||||||    
T  25703992 ttgtctgtttcttatacttgtttctctatagta 25703960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 25813263 - 25813131
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||||| || |||||||  ||||||||||||||||    ||| |||||| ||||||||||| || ||||| ||||||||| ||||||||    
T  25813263 caaaggacccatgccaggtggcatccgaagcatgaccaaacttcaacgactatttcttatgggcaacaacttggagggtaagatattttcactgacaaca 25813164  T
Q  111 ttgtctgtttattatattggtttctctatagta 143  Q
    |||||||||| ||||| | ||||||||||||||    
T  25813163 ttgtctgtttcttatacttgtttctctatagta 25813131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 25659452 - 25659322
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||| |  |||||||||| ||||||||||| || ||||| ||||||||| ||||||||    
T  25659452 caaaggacccatgccaggtggcatccgaaacatgaccaaacttcaacaactatatcttatgggcaacaacttggagggtaagatattttcactgacaaca 25659353  T
Q  111 ttgtctgtttattatattggtttctctatagta 143  Q
    || | ||||| ||||| | ||||||||||||||    
T  25659352 ttat-tgttt-ttatacttgtttctctatagta 25659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 25418236 - 25418162
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcccct 225  Q
    ||||| |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  25418236 tttaatgatgaaagtgtccaggttttgcaaaatctgtatttctaagattttatttaagattggccgcaatcccct 25418162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 25659289 - 25659215
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcccct 225  Q
    ||||| |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  25659289 tttaacgatgaaagtgtccaggttttgcaaaatctgtatttctaagattttatttaagattggccgcaatcccct 25659215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 25348260 - 25348128
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||| |  |||||||||| ||||||||||| || ||||| | ||||| | ||||||||    
T  25348260 caaaggacccatgccaggtggcatccgaaacatgaccaaacttcaacaactatatcttatgggcaacaacttggagggtaagaaatttttactgacaaca 25348161  T
Q  111 ttgtctgtttattatattggtttctctatagta 143  Q
    |  ||||||| ||||| | |||||||| |||||    
T  25348160 tcatctgtttcttatacttgtttctctttagta 25348128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 24557252 - 24557150
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| | |||||||||||||||||||| |||||  |  |||||| ||| | ||||| | |||||||||||||||||||||||||||||||||||    
T  24557252 taattaatgatgatgggactcacttaatggtaggacccattacctattttatgtctatatctctttccaaattgcatcttccatttatttttataaatgg 24557153  T
Q  373 aga 375  Q
    |||    
T  24557152 aga 24557150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 25396341 - 25396267
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcccct 225  Q
    ||||| |||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  25396341 tttaatgatgaaagtgtctaggttttgcaaaatctgtatttctaagattttatttaagattggccgcaatcccct 25396267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 20169118 - 20169187
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20169118 ttttttttgtctatctctctccaaattgcatcttccatttatttttataaatggagaggatcttaacccc 20169187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 24895871 - 24895922
Alignment:
Q  171 tgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24895871 tgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcc 24895922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 24241783 - 24241877
Alignment:
Q  293 cacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccccg 389  Q
    ||||||||| ||||||||||||  ||||||  |||| ||||| | ||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  24241783 cacttaatgatagaacccaccacctatttt--gtgtctatctctatccaaattgtatcttcaatttatttttataaattgagatgatcttaaccccg 24241877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 25325233 - 25325132
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||||| || |||||||  ||||||||||||||||    |||||||||| ||||||||||| || ||||| ||||||||| | ||||||    
T  25325233 caaaggacccatgccaggtggcatccgaagcatgaccaaacttcaacgactatatcttatgggcaacaacttggagggtaagatattttcactaacaaca 25325134  T
Q  111 tt 112  Q
    ||    
T  25325133 tt 25325132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 25411125 - 25411072
Alignment:
Q  172 gttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcccct 225  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  25411125 gttttgcaaaatctgtatttctaagattttatttaagattggccgcaatcccct 25411072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 6148984 - 6148916
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6148984 ttttttctgtctatctctttctaaattgcatcttccatttatttttataaatggagatgatctttaccc 6148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 28069723 - 28069839
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| | ||| ||||||| |||||  | ||||||||||||   |||||    
T  28069723 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 28069822  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  28069823 gagaggatcttcacccc 28069839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 30426740 - 30426665
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  30426740 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgca 30426665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 18689495 - 18689585
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||||||||| | ||| || ||||||||||||| | |||| || |||||| | ||||||||| |||||||||||||| |||||||||||||    
T  18689495 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatattccatttatttt 18689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 30796282 - 30796383
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| |||||||| |||||| || |||| ||| |||| ||||||| | || ||||| | | ||||||||||||||||||| |||||||||||||    
T  30796282 taattaatgatggtgggacccacttagtgataga-cccgccatttatttttagcgtctatctcttttcaaattgcatcttccatttgtttttataaatgg 30796380  T
Q  373 aga 375  Q
    |||    
T  30796381 aga 30796383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 387
Target Start/End: Complemental strand, 40695314 - 40695204
Alignment:
Q  277 taatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagat 376  Q
    |||||| ||||| ||||||||| |||||| ||| ||||| |||||||||||| ||||| ||||||| || ||   ||||||||||||  ||||||||||     
T  40695314 taatgatggtggaactcacttagtggtaggacctaccatctattttttgtgtctatctctctccaacttccaaactccatttattttgctaaatggagaa 40695215  T
Q  377 gatcttaaccc 387  Q
    |||||| ||||    
T  40695214 gatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 37966487 - 37966399
Alignment:
Q  300 tggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||| ||| || || |||||||||||||||||| ||| |||||||||  |||||||||||||   ||||||||| ||||||||||||    
T  37966487 tggtaggacctacaatctattttttgtgtttatctctcttcaaattgcaaattccatttattttgccaaatggagaggatcttaacccc 37966399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 21486927 - 21486978
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatatttttt 324  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  21486927 taattaatgatggtgggactcacttaatagtagaacccactatatatttttt 21486978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 25348069 - 25347998
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcc 222  Q
    ||||| |||||| ||||||| ||||||| ||||  |||||||| |||||| |||||||||||||||||||||    
T  25348069 tttaatgatgaacgtgtccaggttttgcaaaatatgtatttctgagatttaatttaagattggccgcaatcc 25347998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 388
Target Start/End: Complemental strand, 28403179 - 28403108
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||||||||| ||| | | || ||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  28403179 tattttttgtgtctatttctttctaaattacatcttccatttatttttataaatgaagatgatctttacccc 28403108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 11759252 - 11759294
Alignment:
Q  338 tccaaattgcatcttccatttatttttataaatggagatgatc 380  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  11759252 tccaaattgcatcttccatttatttttataaatggagaggatc 11759294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 10672583 - 10672522
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatct 334  Q
    |||||||||| ||||||||||||||| |||||| | ||||||| |||||||||||| |||||    
T  10672583 taattaatgatggtgggactcacttagtggtaggatccaccatctattttttgtgtctatct 10672522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 23260661 - 23260560
Alignment:
Q  14 aggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaata-ttttcattgacaacatt 112  Q
    ||||| ||| |||| || ||||||| ||||||||||||||||| | ||||||||||  || |||||||| || ||||| ||| |||||||| ||||||||    
T  23260661 aggactcattccaggtggcatccgaaacatgaccaaacttcaatatttatatcttaacggaaacaacttggacggtaagatatttttcattaacaacatt 23260562  T
Q  113 gt 114  Q
    ||    
T  23260561 gt 23260560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 3763592 - 3763513
Alignment:
Q  274 aattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttc 353  Q
    ||||||||||||||| || ||||||||||||| ||||||||  | |||||| ||| || |  ||||||||||||||||||    
T  3763592 aattaatgacggtggaacccacttaatggtaggacccaccaccttttttttttgtctaccactctccaaattgcatcttc 3763513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 26749619 - 26749544
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| || ||| ||||| ||  |||||||||||| ||||| |||||||||||||    
T  26749619 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgca 26749544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 36748562 - 36748476
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttat 360  Q
    |||||||||| |||||||  ||||||||||||| |||| |  | ||||||| |||| ||||||||||||||| ||||| |||||||||    
T  36748562 taattaatgatggtgggatccacttaatggtaggacccgctgtctattttt-gtgtctatctatctccaaatggcatcctccatttat 36748476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 25703927 - 25703853
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcccct 225  Q
    ||||| |||||||||||  | ||||||| ||||| |||||||| ||| || ||||||||||| ||||||||||||    
T  25703927 tttaatgatgaaagtgtttaggttttgcaaaatctgtatttctgagaattaatttaagattgtccgcaatcccct 25703853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 25813098 - 25813024
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatcccct 225  Q
    ||||| |||||||||||  | ||||||| ||||| |||||||| ||| || ||||||||||| ||||||||||||    
T  25813098 tttaatgatgaaagtgtttaggttttgcaaaatctgtatttctgagaattaatttaagattgtccgcaatcccct 25813024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 44859238 - 44859188
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttt 323  Q
    |||||||||| |||||||| |||||| |||||||||||||||| |||||||    
T  44859238 taattaatgatggtgggacccacttagtggtagaacccaccatctattttt 44859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 5900186 - 5900227
Alignment:
Q  341 aaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  5900186 aaattgcatcttccatttatttttataaatgaagaggatctt 5900227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 6399962 - 6400023
Alignment:
Q  307 acccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataa 368  Q
    ||||||||| |||||||||||| ||||| | | |||||  ||||||||||||||||||||||    
T  6399962 acccaccatctattttttgtgtctatctctttgcaaatgacatcttccatttatttttataa 6400023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 25580321 - 25580218
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    |||||||||||||||||  ||||||| | ||||||||||||||||| |  | ||||||  || ||||||  | |||||||| |||||||| || |||| |    
T  25580321 caaaggacccatgccaggagacatccaaaacatgaccaaacttcaacaactttatctttctgacaacaatatggaaggtaatatattttccttaacaata 25580222  T
Q  111 ttgt 114  Q
    ||||    
T  25580221 ttgt 25580218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 36991360 - 36991475
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| ||||| ||| ||||| || ||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  36991360 taattaatgatggtgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatg 36991459  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  36991460 gagaggatcttcaccc 36991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 25499533 - 25499501
Alignment:
Q  193 taagattttatttaagattggccgcaatcccct 225  Q
    ||||||||||||| |||||||||||||||||||    
T  25499533 taagattttatttgagattggccgcaatcccct 25499501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 345
Target Start/End: Original strand, 34612568 - 34612640
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaatt 345  Q
    |||||||||| |||| ||| |||||| || ||| ||||||||  |||||||||||| ||||| |||| |||||    
T  34612568 taattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctctaaatt 34612640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 45113274 - 45113350
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatatt-ttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| | |||||| |||||| |||| | ||||||||| |||| |||||||| ||| | |||||||||||||    
T  45113274 taattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgca 45113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 1420 - 1552
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgacaaca 110  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||  |||||||||| || ||||| |||||||||  |||||||    
T  1420 caaaggacccatgccagatggtatccgaaacatgaccaaacttcaagaactatatcttatgcgcaacaacttggagggtaagatattttcaccgacaaca 1519  T
Q  111 ttgtctgtttattatattggtttctctatagta 143  Q
    |||||||||| ||||| | ||||||||||||||    
T  1520 ttgtctgtttcttatacttgtttctctatagta 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 1588 - 1660
Alignment:
Q  151 tttaaggatgaaagtgtccatgttttgcgaaatccgtatttctaagattttatttaagattggccgcaatccc 223  Q
    ||||| ||||||||||| || ||||||| ||||  |||||||| |||||| ||||||||||||||||||||||    
T  1588 tttaatgatgaaagtgttcaggttttgcaaaatatgtatttctgagatttaatttaagattggccgcaatccc 1660  T

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Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 396
Target Start/End: Original strand, 35315521 - 35315628
Alignment:
Q  288 ggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||||||||||| ||| ||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  35315521 ggactcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcatcttccatttatttttataaatggagaggatcttaa-cc 35315619  T
Q  388 cgtttttaa 396  Q
    |||||||||    
T  35315620 cgtttttaa 35315628  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 375
Target Start/End: Original strand, 6592422 - 6592513
Alignment:
Q  284 ggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggaga 375  Q
    ||||||||||| |||||| |||||  |||||| |||||||||||||| ||| | | ||||||||||||| ||||| ||||||||||||||||    
T  6592422 ggtgggactcaattaatgatagaattcaccatctattttttgtgtttttctcttttcaaattgcatctttcatttgtttttataaatggaga 6592513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 36758885 - 36758818
Alignment:
Q  320 tttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  36758885 tttttgtgtctatctctctccaaattgcaacttccatttatttttataaatggagaggatctttaccc 36758818  T

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Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 13238685 - 13238795
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||  |||||| ||||||||| |||||||||||| ||||| ||||||| |||||  | ||||||||||||   |||||    
T  13238685 taattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 13238784  T
Q  372 gagatgatctt 382  Q
    |||| ||||||    
T  13238785 gagaggatctt 13238795  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 15709772 - 15709862
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||||||||| | ||| || ||||||||||||| | |||| || |||||| | ||||||||| |||||||||||||| |||||||||||||    
T  15709772 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatattccatttatttt 15709862  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 35316829 - 35316944
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| | ||||||| |||||||||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  35316829 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 35316928  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  35316929 gagaggatcttcaccc 35316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 28564896 - 28564957
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatct 334  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| |||||    
T  28564896 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatct 28564957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 373235 - 373120
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||| | ||||||| ||| |||||  ||  ||||||||  |||||||||||| ||||| | ||  |||||||   |||||||||||||||||||||    
T  373235 taattaataatggtgggattcatttaataatatgacccaccacctattttttgtgtctatctttttcataattgcaatctccatttatttttataaatgg 373136  T
Q  373 agatgatcttaacccc 388  Q
    ||| ||||| ||||||    
T  373135 agaggatctcaacccc 373120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 374997 - 375072
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |  ||| ||||||||  |||||||||||| ||||| |||||||||||||    
T  374997 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgca 375072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 28853099 - 28853165
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaac 385  Q
    |||||| ||| ||||| | ||||||||| ||| |||||||||||| ||||||||||| |||||||||    
T  28853099 ttttttatgtctatctctttccaaattgtatcctccatttattttgataaatggagaggatcttaac 28853165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 38397085 - 38397199
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||| ||| ||||||||||||||||| |||| |||||| || |||||| | ||| ||||| ||| ||||||||||  ||| |||||| |   ||||||    
T  38397085 taattattgatggtgggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaattgcatactccgtttattatacaaaatgg 38397184  T
Q  373 agatgatcttaaccc 387  Q
    ||| |||||| ||||    
T  38397185 agaggatctttaccc 38397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 15722239 - 15722340
Alignment:
Q  274 aattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgga 373  Q
    ||||||||| ||||| || || |||||||||| |   || || |||||| | ||||||||| | |||||||||||| |||||||||||||| ||||| ||    
T  15722239 aattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaattgcatattccatttatttttctaaataga 15722338  T
Q  374 ga 375  Q
    ||    
T  15722339 ga 15722340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 30840935 - 30841004
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    ||||| |||||||||| ||| ||||||||| |||| ||||||||||| ||||| | | ||||||||||||    
T  30840935 tttttcgtgtttatctttcttcaaattgcaacttcaatttatttttacaaatgaaaaagatcttaacccc 30841004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 19905889 - 19905973
Alignment:
Q  277 taatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatt 361  Q
    |||||| |||||||||||||||||  ||   |||||||| |||||| ||||| ||||| |||| |||||||||  ||||||||||    
T  19905889 taatgatggtgggactcacttaataatatgtcccaccatctattttatgtgtctatctctctcaaaattgcatactccatttatt 19905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 28029983 - 28029927
Alignment:
Q  331 atctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||| ||| ||||||| |||||| ||||||||||||||||| ||||||| |||||||    
T  28029983 atctctctacaaattgtatcttcaatttatttttataaatgaagatgattttaaccc 28029927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 34512075 - 34511987
Alignment:
Q  294 acttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||||| ||| ||||||| || |||||| ||||| ||||| |||||||||||  || || ||||||||| | |||| |||||||||||    
T  34512075 acttaatagtataacccactatctattttatgtgtctatctttctccaaattgtttcctctatttattttaacaaatagagatgatctt 34511987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 8988859 - 8988934
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| || ||| ||| | ||  |||||||||||| ||||| |||||||||||||    
T  8988859 taattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattgca 8988934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 23259558 - 23259483
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||  |||||| | |||| ||||||||  |||||||||||| ||||| ||||||| |||||    
T  23259558 taattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaacttgca 23259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 23459917 - 23459842
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| || ||| || ||| |||| |||  |||||||||||| ||||| |||||||||||||    
T  23459917 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgca 23459842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 375
Target Start/End: Original strand, 36929743 - 36929822
Alignment:
Q  296 ttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggaga 375  Q
    |||||||||| || ||| |  |||||| ||||| ||||| ||||||||||||||  ||||||||||||  ||||||||||    
T  36929743 ttaatggtaggacacactacctattttatgtgtctatctctctccaaattgcatactccatttattttgctaaatggaga 36929822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 387
Target Start/End: Original strand, 2063359 - 2063472
Alignment:
Q  275 attaatgacggtgggactcacttaatggtagaaccca-ccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgga 373  Q
    |||||||| ||||| || |||||  |||||| ||| | |||| |||||||||||| ||||| |||||||||||||   || |||||||||   ||||| |    
T  2063359 attaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgcaaactctatttattttgtcaaatgaa 2063458  T
Q  374 gatgatcttaaccc 387  Q
    || |||||||||||    
T  2063459 gaggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 19908784 - 19908871
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatt 361  Q
    |||||||||| |||||||| |||||||  |||| || ||| || |||||| ||||| |||||  |||||||||||||  ||||||||||    
T  19908784 taattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgcatactccatttatt 19908871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 30709115 - 30709187
Alignment:
Q  274 aattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattg 346  Q
    ||||||||| |||||||  |||||| |||||| |||||  || |||||| ||||| ||||| |||||||||||    
T  30709115 aattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaaattg 30709187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 56453891 - 56453777
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||| ||||| |||||||| ||||||||| ||| ||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  56453891 taatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgcatcttccatttatttctataaatgg 56453792  T
Q  373 agatgatcttaaccc 387  Q
    ||| |||||||||||    
T  56453791 agaggatcttaaccc 56453777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 48084596 - 48084482
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| |||||||| |||||| || ||||||||||||  ||| |||| ||| ||||| |  ||||||  ||||||||||||||||||||||||||    
T  48084596 taattaatgatggtgggacccacttagtgctagaacccaccacttatgttttatgtctatctcttcccaaatgacatcttccatttatttttataaatgg 48084497  T
Q  373 agatgatcttaaccc 387  Q
    ||| |||||| ||||    
T  48084496 agaggatctttaccc 48084482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 4404294 - 4404409
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccata--tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaat 370  Q
    |||||||||| |||| ||| ||||||||| ||| |||||| |    | |||||| ||| ||||| |||||||||| ||||||||||||||||||||||||    
T  4404294 taattaatgatggtgagacacacttaatgataggacccactaacctttttttttttgtctatctttctccaaattacatcttccatttatttttataaat 4404393  T
Q  371 ggagatgatcttaacc 386  Q
    ||||| ||||||||||    
T  4404394 ggagaggatcttaacc 4404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 23474115 - 23474230
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| ||||||| ||||| ||| |||| ||||||||| |||||| ||||| ||||| || |||||||||||  |||||||||| |  |||||||    
T  23474115 taattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctctccccaaattgcatactccatttattatgctaaatgg 23474214  T
Q  373 agatgatcttaacccc 388  Q
    ||| |||||| |||||    
T  23474215 agaggatctttacccc 23474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 19901989 - 19901914
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  19901989 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgca 19901914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 56269147 - 56269072
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| ||||||||  |||||||||||| ||||| |||||||||||||    
T  56269147 taattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattgca 56269072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 5261120 - 5261226
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| | ||| ||||| ||| || ||| |||||| |   ||||||||||| ||||| | || ||||||||||||||||||| ||||||||||||    
T  5261120 taattaatgaggatggaactcatttagtgatagcacccactactaattttttgtgtctatctctttctaaattgcatcttccatttacttttataaatgg 5261219  T
Q  373 agatgat 379  Q
    |||||||    
T  5261220 agatgat 5261226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 54997633 - 54997565
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||| ||| ||||| | ||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  54997633 ttttttatgtctatctctttccaaattgcaacttccatttatttttataaatggagaggatctttaccc 54997565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 56558283 - 56558399
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| || ||| ||||||||| |||||||||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  56558283 taattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 56558382  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  56558383 gagaggatcttcacccc 56558399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 56564838 - 56564905
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaa 384  Q
    |||||||||||| ||| | |||  ||| ||||||||||||||||||||||||||||||| ||||||||    
T  56564838 tattttttgtgtctatatctctttaaactgcatcttccatttatttttataaatggagaggatcttaa 56564905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 387
Target Start/End: Original strand, 23610649 - 23610761
Alignment:
Q  276 ttaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatggag 374  Q
    ||||||| |||||||| |||||| |||||  ||||||||| |||||||||||| ||||| ||||||| |||||    ||||||||||||   ||||||||    
T  23610649 ttaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggag 23610748  T
Q  375 atgatcttaaccc 387  Q
    | |||||| ||||    
T  23610749 aggatcttcaccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 3952241 - 3952126
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgc-atcttccatttatttttataaatg 371  Q
    |||||||||| |||| ||| |||||| |||||| ||||||||| |||||||| ||| ||||| ||||||| |||| |   ||||||||||||   |||||    
T  3952241 taattaatgatggtgagacccacttagtggtaggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatg 3952142  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  3952141 gagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 5524451 - 5524526
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| || ||| ||||||||  |||||||| ||| ||||| |||||||||||||    
T  5524451 taattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattgca 5524526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 33247201 - 33247126
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| ||||| || || ||| |||||||||||||||| ||||| |||||| ||||| ||||||| |||||    
T  33247201 taattaatgatggtggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgca 33247126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 34778425 - 34778500
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| | ||||||| |||||||||||| ||||| ||| ||| |||||    
T  34778425 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgca 34778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 46804690 - 46804741
Alignment:
Q  336 tctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||| ||||    
T  46804690 tctccaaattgcttcttctatttatttttataaatggagaggatcttcaccc 46804741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 9608031 - 9608073
Alignment:
Q  340 caaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  9608031 caaattgcaacttccatttatttttataaatggagaggatctt 9608073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 1015925 - 1015850
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| ||| ||||| | | ||||||||  |||||||||||| ||||| |||| ||||||||    
T  1015925 taattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaattgca 1015850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 5416536 - 5416422
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| |||||| || ||||||| |||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  5416536 taattaatgatggtgggacccacttagtggtaggacccacaatctattttt-gtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 5416438  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  5416437 gagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 30567905 - 30567980
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| | ||| || |||||| |||||| ||||||||| |||||||||||| ||||| ||| ||| |||||    
T  30567905 taattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctctcttcaacttgca 30567980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 36688259 - 36688184
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| || ||| || || ||  |||||||||||| ||||| |||||||||||||    
T  36688259 taattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattgca 36688184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 1871281 - 1871371
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||||||||| | |||||| |||||| | |||| | |||| || ||| |||| ||| ||||| ||||||||||||||  ||||||||||||    
T  1871281 taattaatgatgatgggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaattgcatactccatttatttt 1871371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 387
Target Start/End: Complemental strand, 48914569 - 48914475
Alignment:
Q  293 cacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    ||||| ||| ||| |||||| || |||||| |||||  |||| |||| |||||||||  ||||||||||||  |||||||||| |||||| ||||    
T  48914569 cactttatgataggacccacaatctattttatgtgtcgatctctctctaaattgcattctccatttattttgctaaatggagaagatctttaccc 48914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Original strand, 17080895 - 17080928
Alignment:
Q  352 tccatttatttttataaatggagatgatcttaac 385  Q
    |||||||||||||||||||| |||||||||||||    
T  17080895 tccatttatttttataaatgaagatgatcttaac 17080928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 23119349 - 23119308
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccattt 358  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  23119349 tattttttgtgtttatctctctccaaattgtatcatccattt 23119308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 10565147 - 10565111
Alignment:
Q  351 ttccatttatttttataaatggagatgatcttaaccc 387  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  10565147 ttccatttatttttataaatggagaggatctttaccc 10565111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 276 - 385
Target Start/End: Complemental strand, 27428949 - 27428840
Alignment:
Q  276 ttaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggaga 375  Q
    ||||||| ||||| |||||||||||||||| |  |||||| |||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattgcatcttctatttatttttataaatggaga 27428850  T
Q  376 tgatcttaac 385  Q
     |||||||||    
T  27428849 ggatcttaac 27428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 17247430 - 17247522
Alignment:
Q  293 cacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaac 385  Q
    ||||||||| ||||||||||||  ||||||||| || ||||| |||| ||||| ||||||||||| ||||||||||||||||| |||||||||    
T  17247430 cacttaatgatagaacccaccacctattttttgcgtctatctctctctaaattacatcttccattcatttttataaatggagaagatcttaac 17247522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 10362085 - 10361971
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    ||||||||||||||| ||| ||||||||||||| | |||| |   ||||| ||| | ||||| ||||| |||||||||||||||||| ||||||||||||    
T  10362085 taattaatgacggtgagacccacttaatggtaggatccactaccaattttatgtctctatctctctcctaattgcatcttccatttagttttataaatgg 10361986  T
Q  373 agatgatcttaaccc 387  Q
    ||| |||||| ||||    
T  10361985 agaggatcttcaccc 10361971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 31156551 - 31156664
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    ||||||||||  ||| ||||||||||||| |||| || ||||  |||||||||||| ||||| | | |||||||||| || |||||||||||||||||||    
T  31156551 taattaatgatagtgagactcacttaatgatagatcc-accacttattttttgtgtctatctcttttcaaattgcatatttcatttatttttataaatgg 31156649  T
Q  373 agatgatcttaaccc 387  Q
    |||||||||| ||||    
T  31156650 agatgatctttaccc 31156664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 40753233 - 40753158
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| |||||||||||||||||||||| ||||| ||||||| |||||    
T  40753233 taattaatgatggtgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaacttgca 40753158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 3057209 - 3057135
Alignment:
Q  289 gactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||| | |||||||||||  |||||||||||||    
T  3057209 gactcacttaatggtaggatccaccatctattttttgtgtttatctctatccaaattgcaaattccatttatttt 3057135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 29340999 - 29341113
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| |||||||| |||||||| |||| |||||| || |||||| ||||| ||||| ||||||||||||||  |||||||||| |   ||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgcatactccatttattataccaaatgg 29341098  T
Q  373 agatgatcttaaccc 387  Q
    ||| |||||| ||||    
T  29341099 agaggatctttaccc 29341113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 4895806 - 4895731
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  4895806 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgca 4895731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 11775797 - 11775872
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    ||||||||||||||||||| |||||| |||||| | ||||||| |||||||||||| ||||| ||||||| |||||    
T  11775797 taattaatgacggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgca 11775872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 18625492 - 18625377
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| | ||| ||||||| |||||  | ||||||||||||   |||||    
T  18625492 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 18625393  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  18625392 gagaggatcttcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 34827196 - 34827311
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    ||||||| || |||||||| |||||| |||||| | ||||||| |||||||| ||| ||||| ||||||| ||||||   ||||||||||||  ||||||    
T  34827196 taattaaagatggtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttgctaaatg 34827295  T
Q  372 gagatgatcttaaccc 387  Q
    ||||||||||| ||||    
T  34827296 gagatgatcttcaccc 34827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 35660680 - 35660605
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  35660680 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgca 35660605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 395
Target Start/End: Original strand, 37266735 - 37266858
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||  ||||||||| |||||||||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  37266735 taattaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 37266834  T
Q  372 gagatgatcttaaccccgttttta 395  Q
    |||| |||||| ||||| ||||||    
T  37266835 gagaggatcttcaccccattttta 37266858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 363
Target Start/End: Original strand, 18653376 - 18653455
Alignment:
Q  284 ggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||| |||||||||||||||||||| ||| || |||||||||||| ||||| ||| |||||||||   ||||||||||||    
T  18653376 ggtgagactcacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattgcaaactccatttatttt 18653455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 14349807 - 14349876
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| | ||| |||||||    
T  14349807 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaa 14349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 19179513 - 19179578
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    |||||||| ||| |||||   ||||||| |||||||||||||||||||||||||||||| ||||||    
T  19179513 tattttttttgtctatctccttccaaatcgcatcttccatttatttttataaatggagaggatctt 19179578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 36290606 - 36290681
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||  |||||| || ||| ||||||||  |||||||||||| ||||| |||||||||||||    
T  36290606 taattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgca 36290681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 27721179 - 27721249
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||||| ||| ||||| | || |||||| ||||||||||||||||||| |||||||| |||| ||||||    
T  27721179 tattttttatgtctatctctttctaaattgtatcttccatttatttttattaatggagaggatcctaaccc 27721249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 31546763 - 31546829
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaac 385  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||| ||||||  ||| |||||||||    
T  31546763 ttttttatgtttatctctctccaaattgtatcctccatttattttgataaataaagaggatcttaac 31546829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 13032122 - 13032238
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| || ||| |||||| || |||||| ||||| |||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  13032122 taattaatgatggtgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 13032221  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  13032222 gagaggatcttcacccc 13032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 28043529 - 28043477
Alignment:
Q  330 tatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||| |||| |||||||| ||| |||||||||||||||||| ||||||||||    
T  28043529 tatctctctctaaattgcaactttcatttatttttataaatgaagatgatctt 28043477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 31653039 - 31653115
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcat 349  Q
    ||||||||||  ||| |||||||||||| |||| || | | || |||||| ||||||||||| ||||||||||||||    
T  31653039 taattaatgattgtgagactcacttaatagtaggactcgctatctattttatgtgtttatctctctccaaattgcat 31653115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 4592804 - 4592858
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtg 327  Q
    |||||||||| |||||||| |||||| |||||  ||||||||| |||||||||||    
T  4592804 taattaatgatggtgggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 35650322 - 35650436
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| ||||  | ||| |||||  ||| ||||||||  |||||||||||| ||||| | | | |||||||   |||||||||||| ||||||||    
T  35650322 taattaatgatggtgaaattcatttaataataggacccaccacctattttttgtgtctatcttttttctaattgcaatctccatttattttaataaatgg 35650421  T
Q  373 agatgatcttaaccc 387  Q
    ||| ||||| |||||    
T  35650422 agaggatctcaaccc 35650436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 39902419 - 39902488
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||||||| ||||| |  || ||| |||||| ||||||||| ||||| |||||||||||| |||||||    
T  39902419 taattaatgatggtggaatccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaa 39902488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 28142846 - 28142814
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtag 305  Q
    |||||||||| ||||||||||||||||||||||    
T  28142846 taattaatgatggtgggactcacttaatggtag 28142814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 382
Target Start/End: Complemental strand, 51982656 - 51982547
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| | | | |||||||||||| |||||||||| |  |||||| ||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  51982656 taattaatgatgatagaactcacttaatgatagaacccactaactattttatgtatctatctctctccaaattgcatcttccatttatttttataaatgg 51982557  T
Q  373 agatgatctt 382  Q
    ||| ||||||    
T  51982556 agaggatctt 51982547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 28792010 - 28792062
Alignment:
Q  330 tatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28792010 tatctctctccaaattgcatcttccatttatttttataaatggagatgatctt 28792062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 3009272 - 3009339
Alignment:
Q  320 tttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    ||||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  3009272 tttttttgtctatctctctccaaattgcaacttccatttatttttataaatggagaggatctttaccc 3009339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 43720018 - 43719903
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| |||||| || |||||||||||| ||||| ||||||| |||||    ||||||||||||  ||||||    
T  43720018 taattaatgatggtgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatg 43719919  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  43719918 gagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 391
Target Start/End: Original strand, 54911658 - 54911775
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| ||||| ||||| |||||||||| |||||| |  |||||| ||| | ||||| ||| ||||||| |||||| |||||||||||||||||     
T  54911658 taattaatgatggtggaactcatttaatggtaggacccactacctattttatgtctctatctctcttcaaattgtatcttc-atttatttttataaatgt 54911756  T
Q  373 agatgatcttaaccccgtt 391  Q
    |||  ||||| ||||||||    
T  54911757 agagaatctttaccccgtt 54911775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 19830502 - 19830447
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgt 328  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||    
T  19830502 taattaatgatggtgggacccacttaatggtaggacccaccatctattttttgtgt 19830447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 27033655 - 27033770
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||  |||||| |||||| ||||||||| ||||| |||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  27033655 taattaatgatggtgggatccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatg 27033754  T
Q  372 gagatgatcttaaccc 387  Q
    ||||||||||| ||||    
T  27033755 gagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 28229472 - 28229359
Alignment:
Q  274 aattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgga 373  Q
    ||||||||| |||| |||||| |||||| ||| || |||||  |||||||||||| ||| | | ||| |||||||   |||||||||||| |||||||||    
T  28229472 aattaatgatggtgagactcatttaatgataggactcaccacctattttttgtgtctatatctttcctaattgcacactccatttattttaataaatgga 28229373  T
Q  374 gatgatcttaaccc 387  Q
    || ||||| |||||    
T  28229372 gaggatctcaaccc 28229359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 382
Target Start/End: Complemental strand, 47914238 - 47914129
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| |||||||||||||||||  ||| | | || |  |||||| ||| | ||||  |||| ||||| ||||||| ||||||||||||||||||    
T  47914238 taattaatgatggtgggactcacttaataataggatctactacctattttatgtctatatcactctctaaattacatcttctatttatttttataaatgg 47914139  T
Q  373 agatgatctt 382  Q
    ||| ||||||    
T  47914138 agaggatctt 47914129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 40851781 - 40851853
Alignment:
Q  276 ttaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    ||||||| ||| |||| |||||| |||| ||||||||||| |||||||||||| ||||| ||||||| |||||    
T  40851781 ttaatgatggtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgca 40851853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 550876 - 550797
Alignment:
Q  284 ggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||||||| ||||||||| ||| | ||||||| |||||||||| | ||||| |||||||||||||   ||||||||||||    
T  550876 ggtgggacccacttaatgataggatccaccatctattttttgtatatatctttctccaaattgcaaactccatttatttt 550797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 31523739 - 31523664
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| |  ||| ||||||||  |||||||||||| ||||| |||||||||||||    
T  31523739 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgca 31523664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 34373835 - 34373910
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| ||||||||  | ||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  34373835 taattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaacttgca 34373910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 37323996 - 37323931
Alignment:
Q  320 tttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaac 385  Q
    ||||||||| ||||| ||||||||||| ||| |||||||||||| |||||| |||| ||| |||||    
T  37323996 tttttgtgtctatctctctccaaattgtatcctccatttattttgataaatagagaggattttaac 37323931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 342
Target Start/End: Original strand, 46167417 - 46167466
Alignment:
Q  293 cacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||| |||||| |||||||||||||||||||||| ||||| |||||||    
T  46167417 cacttagtggtaggacccaccatatattttttgtgtctatctctctccaa 46167466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 2229987 - 2230062
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| ||||| |  |||||| |||||| ||||| ||| |||||||||||| ||||| ||||||| |||||    
T  2229987 taattaatgatggtggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaacttgca 2230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 12402970 - 12403045
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||| | ||||||||||||||| |||||||| ||||||| || ||||| | | ||||| ||||||| |||||    
T  12402970 taattaataatggtgggactcacttagtggtagaatccaccatctaatttttatatctatctctctccaacttgca 12403045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 49679341 - 49679266
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| || ||| || ||| |||| |||  |||||||||||| ||||| |||||||||||||    
T  49679341 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgca 49679266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 387
Target Start/End: Original strand, 52963783 - 52963854
Alignment:
Q  316 atattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    ||||||| ||| | ||||| ||| |||||| ||| || |||||||||||||||||||||| |||||| ||||    
T  52963783 atattttatgtttctatctctcttcaaattacatttttcatttatttttataaatggagaggatctttaccc 52963854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 566834 - 566732
Alignment:
Q  284 ggtgggactcacttaatggtagaacccaccatatatttttt-gtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    |||||||| ||||||||| ||| | || ||||||||||||| || | ||||| |||||||||||||   ||||||||||||   ||||| | ||||||||    
T  566834 ggtgggacccacttaatgataggatccgccatatatttttttgtatctatctctctccaaattgcaaactccatttattttgccaaatgtaaatgatctt 566735  T
Q  383 aac 385  Q
    |||    
T  566734 aac 566732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 30235491 - 30235418
Alignment:
Q  307 acccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatc 380  Q
    |||||| || |||||||| ||| ||||| ||| ||||||||||  |||||||||||| | ||||| ||||||||    
T  30235491 acccacaatctattttttatgtctatctctcttcaaattgcatactccatttattttaacaaatgaagatgatc 30235418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 388
Target Start/End: Complemental strand, 778886 - 778850
Alignment:
Q  352 tccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  778886 tccatttatttttataaatggagaagatctcaacccc 778850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 36354288 - 36354232
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggaga 375  Q
    ||||||||||| |||| ||||||||||| || ||||||||| ||| | |||||||||    
T  36354288 ttttttgtgttcatctctctccaaattgtatattccatttactttaacaaatggaga 36354232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 27982090 - 27982171
Alignment:
Q  307 acccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    ||||| |||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27982090 acccaacatatattttttatgtctatatctctccaaattgcatcttccatttatttttataaatggagaggatcttaacccc 27982171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 35534983 - 35535035
Alignment:
Q  336 tctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  35534983 tctccaaattgcatcttccatttatttttataaatggagatggtctttacccc 35535035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 392
Target Start/End: Original strand, 50484390 - 50484510
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    ||||||||||||||||||| |||||| |||| | ||||||||| |||||||||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  50484390 taattaatgacggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 50484489  T
Q  372 gagatgatcttaaccccgttt 392  Q
    |||| |||||| |||| ||||    
T  50484490 gagaggatcttcaccctgttt 50484510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 12380981 - 12380926
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgt 328  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  12380981 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgt 12380926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 12385048 - 12384993
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgt 328  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  12385048 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgt 12384993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 30077715 - 30077640
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    ||||||||||  |||||||||||||| || ||||||||||||  |||||||||||| ||||| |||||||||||||    
T  30077715 taattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattgca 30077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 10776146 - 10776211
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    |||||| ||||||||||| | |  ||||||||||||||||||||||||||||||||||| ||||||    
T  10776146 tattttatgtgtttatctctttttaaattgcatcttccatttatttttataaatggagaggatctt 10776211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 33441581 - 33441646
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    |||||||||||| ||||| |||| |||||| | ||||||||||||||||||||||| || ||||||    
T  33441581 tattttttgtgtctatctctctctaaattgtaacttccatttatttttataaatggggaggatctt 33441646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 40808491 - 40808548
Alignment:
Q  305 gaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttattt 362  Q
    |||||||||| ||||||||||||| ||||| | ||||||||||||||| |||||||||    
T  40808491 gaacccaccacatattttttgtgtctatctctttccaaattgcatctttcatttattt 40808548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 39426214 - 39426330
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcat-cttccatttatttttataaatg 371  Q
    ||||||||||  ||||||| || ||| |||||| |||||| || |||||| ||||| ||||| |||||||||||  | ||||||||||||||   |||||    
T  39426214 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatg 39426313  T
Q  372 gagatgatcttaacccc 388  Q
    ||||||||  |||||||    
T  39426314 gagatgatactaacccc 39426330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 48327224 - 48327109
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| ||||| || |||||| |||||| || |||||| |||||||| ||| ||||| ||||||| |||||  | ||||||||||||   |||||    
T  48327224 taattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttgccaaatg 48327126  T
Q  372 gagatgatcttaacccc 388  Q
    ||||||||||| |||||    
T  48327125 gagatgatcttcacccc 48327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 50294134 - 50294018
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| ||| |||  |||||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||  | ||||||||||||   |||||    
T  50294134 taattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 50294035  T
Q  372 gagatgatcttaacccc 388  Q
     ||| |||||| |||||    
T  50294034 aagaggatcttcacccc 50294018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 12151771 - 12151840
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||||||| |||||||| |||||| |||||| |||||| || |||||||||||| | ||| |||||||    
T  12151771 taattaatgatggtgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaa 12151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 52280110 - 52280035
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||  |||||| || ||| ||||||||  |||||||| ||| ||||| |||||||||||||    
T  52280110 taattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattgca 52280035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 46045691 - 46045793
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| |||||||  |||||| || ||| || || ||  |||||||| |||| |||| ||||||| ||||| ||| ||| || ||||||||||||    
T  46045691 taattaatgatggtgggatacacttagtgataggactcatcacttattttttttgttcatctctctccaagttgcaactttcatataattttataaatgg 46045790  T
Q  373 aga 375  Q
    |||    
T  46045791 aga 46045793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 24413353 - 24413292
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatct 334  Q
    |||||||||| |||||||| || |||||| ||| |||||||||  ||||||||||| |||||    
T  24413353 taattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatct 24413292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 26768899 - 26768940
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccacca 314  Q
    |||||||||| |||| ||||||||||||| ||||||||||||    
T  26768899 taattaatgatggtgagactcacttaatgatagaacccacca 26768940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 18976376 - 18976300
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatatt-ttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| | ||||||  |||||||||| | | ||||||| |||| |||||||| ||||| |||||||||||||    
T  18976376 taattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgca 18976300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 26768966 - 26769018
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatg 371  Q
    |||||||||||||||| | | |||||| ||| ||| |||||||||||||||||    
T  26768966 ttttttgtgtttatctcttttcaaattacattttcaatttatttttataaatg 26769018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 32915960 - 32916050
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    ||||| |||| |||||||||||||||||||||| |||||| || |||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  32915960 taattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattgcatcctccatttatttt 32916050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 44390828 - 44390897
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44390828 ttttttttgtctatctctctccaaattgcatcttccatttatttttataaatggagaggatcttaacccc 44390897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 35207491 - 35207571
Alignment:
Q  307 acccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||| | ||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  35207491 acccacaacatattttttgtgtttatctttctctaaattgcatattcgatttatttttataaacggagatgatcttaaccc 35207571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 382
Target Start/End: Complemental strand, 7712438 - 7712329
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    ||||||| || ||||| || ||||||||||||| || ||| || ||| || ||| | ||||| |||| ||||||||||||||||||||||||||||||||    
T  7712438 taattaaagatggtggcacccacttaatggtaggactcactatctatcttatgtctctatctctctctaaattgcatcttccatttatttttataaatgg 7712339  T
Q  373 agatgatctt 382  Q
    ||| ||||||    
T  7712338 agaggatctt 7712329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 48205671 - 48205602
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||   || ||||||||||||    
T  48205671 ttttttgtgtttatctctctccaaattgcatcttccatttatttttataaataacgaggatcttaacccc 48205602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 18198260 - 18198376
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||| ||| ||||||||| |||||    ||||||||||||   |||||    
T  18198260 taattaatgatggtgggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatg 18198359  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  18198360 gagaggatcttcacccc 18198376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 9559125 - 9559010
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||| | ||||| ||||||| |||||  | ||||||||||||   |||||    
T  9559125 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatg 9559026  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  9559025 gagaggatcttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 25084799 - 25084730
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| |||||||    
T  25084799 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 25084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 4888471 - 4888587
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| ||||||||  ||||| |||||| |||||| || |||||||||||| ||||| ||||||| |||||  | ||||||||||||   |||||    
T  4888471 taattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatg 4888570  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  4888571 gagaggatcttcacccc 4888587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 12139330 - 12139406
Alignment:
Q  273 taattaatgacggtgggactc-acttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| | |||||||||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  12139330 taattaatgatggtgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaacttgca 12139406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 27117500 - 27117444
Alignment:
Q  326 tgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||||||| | | |||||| ||||||||||||||||||||||||||||| ||||||    
T  27117500 tgtttatctcttttcaaattacatcttccatttatttttataaatggagaggatctt 27117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 989133 - 989208
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||| | ||| ||||  ||||| |||||| |||||| ||||||||||||||| ||||| |||||||||||||    
T  989133 taattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgca 989208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 372
Target Start/End: Original strand, 8149613 - 8149712
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| |||||||| ||||||||| ||  |||||| |  ||||||  || | ||||| ||| ||||||||||| ||||||||||| |||||||||    
T  8149613 taattaatgatggtgggacccacttaatgatatgacccactacttattttacgtctctatctctcttcaaattgcatcatccatttatttgtataaatgg 8149712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 47799971 - 47799896
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| || ||| ||||| ||  |||||||||||| ||||| |||||||||||||    
T  47799971 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgca 47799896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 48831240 - 48831165
Alignment:
Q  296 ttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatg 371  Q
    |||||| ||| || |||||  |||||||||||| ||||| ||| ||||||| |||| |||||||||||||||||||    
T  48831240 ttaatgataggacacaccacctattttttgtgtctatctttcttcaaattgtatctaccatttatttttataaatg 48831165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 33450510 - 33450627
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatatt-ttttgtgtttatctatctccaaattgc-atcttccatttatttttataaat 370  Q
    |||||||||| | |||||| |||||| |||| | ||||||||| |||| |||||||| ||||| |||||||||||| |   || |||||||||   ||||    
T  33450510 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaat 33450609  T
Q  371 ggagatgatcttaacccc 388  Q
    ||||| ||||||||||||    
T  33450610 ggagaggatcttaacccc 33450627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 40143552 - 40143617
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    |||| |||| || ||||| | ||||||||  |||||||||||||||||||||||||||| ||||||    
T  40143552 tattgtttgggtctatctctttccaaattatatcttccatttatttttataaatggagaggatctt 40143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 16366522 - 16366638
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| | ||||||| ||||| || ||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  16366522 taattaatgatggtgggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 16366621  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  16366622 gagaggatcttcacccc 16366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 47226145 - 47226072
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| || ||| |||| | |||||||||||  ||||||||||||||| ||||||| |||||    
T  47226145 taattaatgatggtgggacccatttagtggtgggacccaccatat--tttttgtgtttatctctctccaacttgca 47226072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 47271173 - 47271109
Alignment:
Q  318 attttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    ||||||||||| ||||| |||||||||||||   ||||||||||||  |||||||||| ||||||    
T  47271173 attttttgtgtctatctctctccaaattgcaaactccatttattttgctaaatggagaggatctt 47271109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 7362572 - 7362647
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| ||||| || || ||| |||||  ||||||||| |||||||||||| ||||| ||||||| |||||    
T  7362572 taattaatgatggtggaacccatttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgca 7362647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 382
Target Start/End: Complemental strand, 8014667 - 8014632
Alignment:
Q  347 catcttccatttatttttataaatggagatgatctt 382  Q
    ||||||||||||||||||||||||| ||||||||||    
T  8014667 catcttccatttatttttataaatgaagatgatctt 8014632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 18803298 - 18803337
Alignment:
Q  348 atcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  18803298 atcttccatttatttttataaatggagaggatctttaccc 18803337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 21151156 - 21151271
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| |||||| | || |||| ||||| |||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  21151156 taattaatgatggtgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 21151255  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  21151256 gagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 32916173 - 32916287
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    |||||||||| ||||| |  |||||| |||||  |||||| |  ||||||| |||| ||||| | |  |||| ||||| |  ||||||||||||||||||    
T  32916173 taattaatgatggtggaatccacttagtggtatgacccacaacctatttttcgtgtgtatctctttataaatggcatcctatatttatttttataaatgg 32916272  T
Q  373 agatgatcttaaccc 387  Q
    |||||||||| ||||    
T  32916273 agatgatctttaccc 32916287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 676093 - 676032
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatct 334  Q
    |||||||||| |||| |||||| |||||| ||| |  ||||| |||||||||||||||||||    
T  676093 taattaatgatggtgagactcatttaatgataggaatcaccacatattttttgtgtttatct 676032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 8608099 - 8608140
Alignment:
Q  341 aaattgcatcttccatttatttttataaatggagatgatctt 382  Q
    |||||||||||||| ||||||||| |||||||||| ||||||    
T  8608099 aaattgcatcttccgtttatttttgtaaatggagaggatctt 8608140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 380
Target Start/End: Complemental strand, 1193692 - 1193664
Alignment:
Q  352 tccatttatttttataaatggagatgatc 380  Q
    |||||||||||||||||||||||||||||    
T  1193692 tccatttatttttataaatggagatgatc 1193664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 6882075 - 6882035
Alignment:
Q  347 catcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||||||| |||||||||||||||||| |||||| ||||    
T  6882075 catcttccatatatttttataaatggagaggatctttaccc 6882035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 29844316 - 29844368
Alignment:
Q  294 acttaatggtagaacccaccatatattttttgtgtttatctatctccaaattg 346  Q
    ||||| ||||||||||||| || |||||| ||||| ||||| |||||||||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaaattg 29844368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 33608901 - 33608857
Alignment:
Q  319 ttttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||||||||||||||| |||||||||||||   ||||||||||||    
T  33608901 ttttttgtgtttatctctctccaaattgcaaactccatttatttt 33608857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 34986017 - 34985941
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatatt-ttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| | ||||||||| ||| ||||   ||||||||| |||| |||||||| ||||| |||||||||||||    
T  34986017 taattaatgatgatgggactcatttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattgca 34985941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 32254102 - 32253988
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    ||||||||||  ||||||||||||||||| ||| ||||||||  | |||||| ||| |||||  ||||||||  |||||| |||||||||||| ||||||    
T  32254102 taattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaaatgacatctttcatttatttttacaaatgg 32254003  T
Q  373 agatgatcttaaccc 387  Q
    ||| |||||||||||    
T  32254002 agaggatcttaaccc 32253988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 30460581 - 30460504
Alignment:
Q  310 caccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    |||||| |||||||||| | ||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  30460581 caccatctattttttgtatatatctctctccaaattacatcttccatttatttttataaattgagaggatcttaaccc 30460504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 21159440 - 21159324
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgc--atcttccatttatttttataaat 370  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||| | ||||||| ||||  | ||| |||||||||| | ||||    
T  21159440 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaactt-catttattttaacaaat 21159342  T
Q  371 ggagatgatcttaacccc 388  Q
    ||||| |||||| |||||    
T  21159341 ggagaggatcttcacccc 21159324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 4804452 - 4804521
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| |||||||    
T  4804452 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 4804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 20228541 - 20228473
Alignment:
Q  307 acccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggaga 375  Q
    ||||||||| |||||||||||| ||||| | ||| ||||| |||||| |||||||||||||||||||||    
T  20228541 acccaccatctattttttgtgtctatctttttccgaattgtatcttctatttatttttataaatggaga 20228473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 22122525 - 22122457
Alignment:
Q  307 acccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggaga 375  Q
    ||||||||| |||||||||||| ||||| | ||| ||||| |||||| |||||||||||||||||||||    
T  22122525 acccaccatctattttttgtgtctatctttttccgaattgtatcttctatttatttttataaatggaga 22122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 7162088 - 7162203
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| |||||||| |||||| | |||| ||||||||| ||||| |||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  7162088 taattaatgatggtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatg 7162187  T
Q  372 gagatgatcttaaccc 387  Q
    ||||||||||| ||||    
T  7162188 gagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 24484883 - 24484958
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| |||||||| |||||| || ||| ||||||||  |||||||||||| ||||| |||||||||||||    
T  24484883 taattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgca 24484958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 27826542 - 27826608
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctc 339  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||||||| ||||| ||||    
T  27826542 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctc 27826608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 388
Target Start/End: Complemental strand, 11180455 - 11180384
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaacccc 388  Q
    |||||||||||||||||| | | ||||||| |||||| |||| |||||||||||||||  |||||| |||||    
T  11180455 tattttttgtgtttatctcttttcaaattgtatcttctatttctttttataaatggaggggatctttacccc 11180384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 12412641 - 12412756
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| ||||| || |||||| |||||| ||||||||| ||||| |||||| ||||| ||||||| |||||    ||||||||||||   |||||    
T  12412641 taattaatgatggtggaacccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 12412740  T
Q  372 gagatgatcttaaccc 387  Q
    |||| |||||| ||||    
T  12412741 gagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 17944166 - 17944235
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaa 342  Q
    |||||||||| |||||||| || ||| |||||| ||| ||||| |||||||||||| ||||| |||||||    
T  17944166 taattaatgatggtgggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaa 17944235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 29698167 - 29698220
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgt 326  Q
    |||||||||| |||||||| ||||||||||||| | ||||||| ||||||||||    
T  29698167 taattaatgatggtgggacccacttaatggtaggatccaccatctattttttgt 29698220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 4048583 - 4048547
Alignment:
Q  346 gcatcttccatttatttttataaatggagatgatctt 382  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4048583 gcatcttctatttatttttataaatggagatgatctt 4048547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 13888594 - 13888518
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatatt-ttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| | |||||| || |||||||||| | ||||||| |||| |||||||| ||||| |||||||||||||    
T  13888594 taattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattgca 13888518  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 2142364 - 2142289
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| ||||| || ||| ||||| | | ||||||||  |||||||||||| ||||| |||||||||||||    
T  2142364 taattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattgca 2142289  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 30460875 - 30460942
Alignment:
Q  320 tttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaaccc 387  Q
    ||||||||| ||||| |||||||||||||   ||||||||||||   ||||||||||||| |||||||    
T  30460875 tttttgtgtctatctttctccaaattgcaaactccatttattttgtcaaatggagatgatgttaaccc 30460942  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 7215923 - 7215807
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaat--tgcatcttccatttatttttataaat 370  Q
    ||||||||||  ||||||| || ||| |||||| |||||| || |||||| ||||| ||||| |||||||||  |||| ||||||||||||||   ||||    
T  7215923 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgca-cttccatttattttatcaaat 7215825  T
Q  371 ggagatgatcttaacccc 388  Q
    ||||| |||  |||||||    
T  7215824 ggagaggatactaacccc 7215807  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 2800682 - 2800609
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattg 346  Q
    |||| ||||| |||||||| ||||||||||||  | |||| || |||||| ||||| ||||| |||||||||||    
T  2800682 taatcaatgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaattg 2800609  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 17828619 - 17828563
Alignment:
Q  293 cacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcat 349  Q
    |||||||| |||||| |||| || |||||| ||||| ||||| ||||||||||||||    
T  17828619 cacttaatagtagaatccactatctattttatgtgtctatctctctccaaattgcat 17828563  T

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Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 208067 - 208183
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| | |||||| |||||| |||||| ||||||||| |||||||||||||||||| ||||||| |||||    ||||||||||||   |||||    
T  208067 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatg 208166  T
Q  372 gagatgatcttaacccc 388  Q
    |||| |||||| |||||    
T  208167 gagaggatcttcacccc 208183  T

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Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 58684 - 58774
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttt 363  Q
    |||||||||| | ||| || ||||||||||||| | |||| || |||||| | ||||||||| |||||||||||||| |||||||||||||    
T  58684 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatattccatttatttt 58774  T

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Target: scaffold0062; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 70796 - 70897
Alignment:
Q  274 aattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgga 373  Q
    ||||||||| ||||| || || |||||||||| |   || || |||||| | ||||||||| | |||||||||||| |||||||||||||| ||||| ||    
T  70796 aattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaattgcatattccatttatttttctaaataga 70895  T
Q  374 ga 375  Q
    ||    
T  70896 ga 70897  T

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Target: scaffold0250 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 7151 - 7226
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| ||||| || |||||||| |||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  7151 taattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaacttgca 7226  T

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Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 16468 - 16393
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgca 348  Q
    |||||||||| | |||||| |||||| |||||| ||||||||| |||||||||||| ||||| ||||||| |||||    
T  16468 taattaatgatgatgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaacttgca 16393  T

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Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 29640 - 29533
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatgg 372  Q
    ||||||||||  ||||||||||| ||||| ||| ||| |  |  |||||| ||| | ||||| |||| ||||||| | ||||||||||||||||||||||    
T  29640 taattaatgatagtgggactcacgtaatgctaggacctattacctattttatgtctctatctctctctaaattgctttttccatttatttttataaatgg 29541  T
Q  373 agatgatc 380  Q
    ||| ||||    
T  29540 agaggatc 29533  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 9272 - 9157
Alignment:
Q  273 taattaatgacggtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatct-tccatttatttttataaatg 371  Q
    |||||||||| ||||| |  |||||| |||| | ||||||||| |||||| ||||| ||||| ||||||| |||||  | ||||||||||||   |||||    
T  9272 taattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 9173  T
Q  372 gagatgatcttaaccc 387  Q
    ||||||||||| ||||    
T  9172 gagatgatcttcaccc 9157  T

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Target: scaffold0830 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 463 - 559
Alignment:
Q  11 caaaggacccatgccagatgacatccgatacatgaccaaacttcaagagttatatcttattggcaacaacttagaaggtaaaatattttcattgaca 107  Q
    |||||||||||| ||||| | ||||    ||||| ||||||||||| | |||| ||||||||||||||| || || ||||| |||||| ||||||||    
T  463 caaaggacccataccagaaggcatcatgaacatggccaaacttcaaaatttatttcttattggcaacaatttggagggtaagatatttccattgaca 559  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 22501 - 22399
Alignment:
Q  285 gtgggactcacttaatggtagaacccaccatatattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaa 384  Q
    |||| ||||||||| |||||| | |||| || |||||||||||| ||||| | |  ||||||||   ||||||||||||  |||||| ||| ||||||||    
T  22501 gtggaactcacttagtggtaggatccactatctattttttgtgtctatctctttgtaaattgcaaactccatttattttgctaaatgcagaggatcttaa 22402  T
Q  385 ccc 387  Q
    |||    
T  22401 ccc 22399  T

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Target: scaffold0252 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 10501 - 10433
Alignment:
Q  317 tattttttgtgtttatctatctccaaattgcatcttccatttatttttataaatggagatgatcttaac 385  Q
    |||||||||||||||| | | |  |||||| ||  |||||||||||| ||||||||||| |||||||||    
T  10501 tattttttgtgtttatttctttttaaattgtattctccatttattttgataaatggagaggatcttaac 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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