View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15016_low_10 (Length: 281)
Name: NF15016_low_10
Description: NF15016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15016_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 266
Target Start/End: Original strand, 33357079 - 33357332
Alignment:
| Q |
13 |
aatattaatcattaataattatttttaaaaacaaccattattaatgttgaatagtgaaaaataattcactaaaataagtttaatgagaaaggataatatt |
112 |
Q |
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| T |
33357079 |
aatattaatcattaataattattttaaaaaacaaccattattaatgttgaatagtgaaaaataattcactaaaataagtttaatgagaaaggataatatt |
33357178 |
T |
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| Q |
113 |
tcttgcacttacataacatccgtcactatcacttctgtatattataggggcaatttttattctcctatttcaaacatatgacatttttggtgttgaatgt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33357179 |
tcttgcacttacataacatccgtcactatcacttctgtatattataggggcaatttttattctcctatttcaaacatatgacatttttggtgttgaatgt |
33357278 |
T |
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| Q |
213 |
ttgatgtatcatatcatttaaatgtgattatcatagcaccttttgagaaggttg |
266 |
Q |
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| T |
33357279 |
ttgatgtatcatatcatttaaatgtgattatcatagcacctgttgagaaggttg |
33357332 |
T |
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