View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15018_low_2 (Length: 335)
Name: NF15018_low_2
Description: NF15018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15018_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 20670863 - 20670538
Alignment:
| Q |
1 |
tcatcaaggtggaaattaccggggaagctatcggtaacggtgatggttttaccggggagaagagtaggtatacgagagtaacgagggaggaggaggaggt |
100 |
Q |
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| T |
20670863 |
tcatcaagggtgaaattaccggggaagttatcggtaacggtgatggttttaccggggagaagagtagggatacgagagtaacgagggaggaggaggaggt |
20670764 |
T |
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| Q |
101 |
cagtgtagacgagacgttgagggatgatatgatatggaaaagtgaaggggtttaatgtagaggaagatggtaagggttgttgagggatgaagagtgttag |
200 |
Q |
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| T |
20670763 |
cagcgtagacgagacgttgagggatgatatgatatggaaaagtgaaggggtttaatgtagaggaagatggtaagggttgttgaggaatgaagagtgttag |
20670664 |
T |
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| Q |
201 |
gctaagtgatggatgtgagattgataagatgcttacccatttgtttacgcttgtgtctcctgatcctattagtgcatcaagaatgttgttcatttcttgc |
300 |
Q |
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| T |
20670663 |
gctaagtgatggatgggagattgataagatgcttacccatttgtttatgcttgtgtctcctgatcctattagtgcatcaagaatgttgttcatttcttgc |
20670564 |
T |
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| Q |
301 |
attgccaatggtggagttgatgatgt |
326 |
Q |
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| T |
20670563 |
attgccaatggtggagttgatgatgt |
20670538 |
T |
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