View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15020_high_2 (Length: 270)
Name: NF15020_high_2
Description: NF15020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15020_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 2968629 - 2968385
Alignment:
| Q |
1 |
ttgatttggtaaatgtataatcttagttgtccgatcttaaattaacgattgaaattatctcttgtgtaactgcgtaatgaagtacaacaaatgcatgtat |
100 |
Q |
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| T |
2968629 |
ttgatttggtaaatgtataatattagttgtccgatcttaaattaacgattgaaattatctcttgtgtaactgcgtaatgaagtacaacaaatgcatgtat |
2968530 |
T |
|
| Q |
101 |
catatgcattattcggtaagggtccattagtccattacaacaacacccaagagttaacccactaaataggtcgtctacattgagcaaatgttgccttaat |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
2968529 |
catatacattattcggtaagggtccattagtccattacaacaacacccaaaagtcaacccactaaataggtcgtctacattgatcaaatgttgccttaat |
2968430 |
T |
|
| Q |
201 |
attctatcatgtatcatacttctgatcaactcatttatctcttag |
245 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
2968429 |
attctattatgtatcatacttctgatcaactcatttatctcttag |
2968385 |
T |
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