View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15022_high_26 (Length: 208)
Name: NF15022_high_26
Description: NF15022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15022_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 37366041 - 37366218
Alignment:
| Q |
19 |
aattccttacgccacaaccatcttcaaccatacccatcaccccaacattctcctcttcaactccattatcaaagcccattcttcattcccaccttttcat |
118 |
Q |
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| T |
37366041 |
aattccttacgccacaaccatcttcaaccatacccatcaccccaacattctcctcttcaactccattatcaaagcccattcttcattcccaccttttcat |
37366140 |
T |
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| Q |
119 |
caatccttccactttttcaacctcatgaaaataacccacaacattttacctgataacttcactttcccacctttgctt |
196 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37366141 |
caatccttccactttttcaacctcatgaaaatgacccacaacattttacctgataacttcactttcccacctttgctt |
37366218 |
T |
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