View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15022_low_1 (Length: 481)
Name: NF15022_low_1
Description: NF15022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15022_low_1 |
 | |
|
| [»] scaffold1870 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (4 HSPs) |
| | |
|
| [»] scaffold0349 (2 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 386; Significance: 0; HSPs: 51)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 12 - 465
Target Start/End: Complemental strand, 27609700 - 27609248
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27609700 |
aagaatcaattaaagagcctggagaaagaagtaggttatgctgtcaggatgatatagttcgtgttttaagagaaaacactgtgagtaagattgatatcta |
27609601 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27609600 |
tgatcattttgttatttagttttaatacgactttgctctttttgcactaaatat-gatcatctgatactagcatttcttttcactcaattacatgttaat |
27609502 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
311 |
Q |
| |
|
|| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27609501 |
atatctatgtcttatttttattgtggttgattcatgtttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
27609402 |
T |
|
| Q |
312 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatc |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |
|
|
| T |
27609401 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctggaggtctgaagtatc |
27609302 |
T |
|
| Q |
412 |
ttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
465 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27609301 |
ttccaagcagtttgcgtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
27609248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 12 - 465
Target Start/End: Complemental strand, 27717079 - 27716627
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27717079 |
aagaatcaattaaagagcctggagaaagaagtaggttatgctgtcaggatgatatagttcgtgttttaagagaaaacactgtgagtaagattgatatcta |
27716980 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||||||| | || || |||||||||||||||||||||||||||| |
|
|
| T |
27716979 |
tgatcattttgttatttagttttaatacaactttgctctttttgaactaaatat-gatcatctaaaacgagcatttcttttcactcaattacatgttaat |
27716881 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
311 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27716880 |
atttctatatcttatttttattgtggttgattcatgtttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
27716781 |
T |
|
| Q |
312 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatc |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
27716780 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccattgttctaaaggtctcaagtatc |
27716681 |
T |
|
| Q |
412 |
ttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
465 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27716680 |
ttccaagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
27716627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 12 - 465
Target Start/End: Complemental strand, 27697169 - 27696717
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27697169 |
aagaatcaactaaagagcctggagaaagaagtaggttatgctgtcaggatgatataactcgggttttaagagaaaacactgtgagtaagattgatatcta |
27697070 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27697069 |
tgatcattttgttatttagttttaatacgactttgctctatttgcactaaatat-gatcatctgatactagcatttcttttcactcaattacatgttaat |
27696971 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
311 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27696970 |
atttctatatcttatttttattgtggttgattcatgtttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
27696871 |
T |
|
| Q |
312 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatc |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
27696870 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactcaaaacagttatcattgaaaatggccatttttctgaaggtctcaagcatc |
27696771 |
T |
|
| Q |
412 |
ttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
465 |
Q |
| |
|
| || || ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27696770 |
taccaagaagtttgagtgtattgaaatggaagggatgtttatcgaagtgtctgt |
27696717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 12 - 465
Target Start/End: Original strand, 27680564 - 27681016
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||| |||| || |||||| ||| ||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
27680564 |
aagaatcacctaaagagcctggagaacgaagtaggttatggcgtcaagaagatataattcatgttttaaaagaaaacactgtgagtatgattgatatcta |
27680663 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27680664 |
tgatcattttgttatttagttttaatacgactttgctctttttgcactaaatat-gatcatctgatactagcatttcttttcactcaattacatgttaat |
27680762 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
311 |
Q |
| |
|
|| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27680763 |
atatctatgtcttatttttattgtggttgattcatgtttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
27680862 |
T |
|
| Q |
312 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatc |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
27680863 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccttttttctggaggtctcaagtatc |
27680962 |
T |
|
| Q |
412 |
ttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
465 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27680963 |
ttccaagcagtttgcgtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
27681016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 12 - 453
Target Start/End: Original strand, 31286158 - 31286595
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||| |||| |||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31286158 |
aagaatcacctaaagagccaggagaaagaagtaggctatggtgtcaagatgatatagttcatgctttaaatgaaaacactgtgagtaagattgatatcta |
31286257 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
|| ||| |||||||||| |||||| ||||||||||||||||| ||| ||||| |||||||||||| |||| ||| |||||||||| ||| |
|
|
| T |
31286258 |
tgttcaatttgttatttagttttaaaacgactttgctcttttta----------tgaccatctcatactagtatttatttttacttaattacatgtaaat |
31286347 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgct------tttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccac |
305 |
Q |
| |
|
| || |||||||||||||||||| ||||||| ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
31286348 |
ttctccatatcttatttttattgtggttgatttatgttcttttttttttttttgttaaaagggaactagtaaaattgaaatgatatatatgaatttccac |
31286447 |
T |
|
| Q |
306 |
tccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctca |
405 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | ||| |||| |
|
|
| T |
31286448 |
tccatggaatccgtaatagaccagaaaggaatggccttcaagaagatgacaaaacttaaaacactaatcattgaaaatggccatttttccaatggactca |
31286547 |
T |
|
| Q |
406 |
agtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttat |
453 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31286548 |
agtatcttccaaacagtttgagagtattgaaatggaaaggatgtttat |
31286595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 459
Target Start/End: Complemental strand, 27676194 - 27675741
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27676194 |
aagaatcacctaaagagcctggagaaagaagcaggttatggtctcaagatgatatagttcatgttttaacagaaaacactgtgagtaagattgatatcta |
27676095 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttctttt--cactcaattacatgtta |
209 |
Q |
| |
|
|| ||| |||||||||| ||||||||| | ||||||| ||||| ||||||||| || ||||| ||| |||||||| |||| |||| |||||||||| | |
|
|
| T |
27676094 |
tgttcaatttgttatttagttttaatacaattttgctcattttggactaaatat-gaccatctcatattagtatttttttttccacttaattacatgtaa |
27675996 |
T |
|
| Q |
210 |
atatttctatatcttatttttattgttgttgattcatgcttt-----tatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctcca |
304 |
Q |
| |
|
|| | ||| || ||||||||||| |||||| ||| ||| ||| ||||||||||||||||| |||||| ||||||||||| ||||||| | || |
|
|
| T |
27675995 |
atttctctgtaaaagatttttattgtggttgatgcattttttatttttatttttgttaaaagggaactggtaaaactgaaatgatatgtatgaatttgca |
27675896 |
T |
|
| Q |
305 |
ctccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctc |
404 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
27675895 |
ctccatggaatccgtaatagacaagaaaggaaaggccttcaaaaagatgacaagattgaaaacacttatcattgaaaatggccattgttctaaaggtctc |
27675796 |
T |
|
| Q |
405 |
aagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagt |
459 |
Q |
| |
|
||| ||||||| |||||||||| | |||||||||| ||||||||||||| |||| |
|
|
| T |
27675795 |
aagcatcttccaagcagtttgaaagcattgaaatgggaaggatgtttatcaaagt |
27675741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 459
Target Start/End: Complemental strand, 27591595 - 27591144
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
27591595 |
aagaatcacctaaagagcctggagaaagaagcaggttatggtctcaagatgatatagttcatgttttaaaagaaaacactgtgcgtaagattgatatcta |
27591496 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
|| ||| |||||||||| ||||||||| ||||||||| ||||| ||||||||| || ||||| |||||||||| | ||| |||| |||||||||| ||| |
|
|
| T |
27591495 |
tgttcaatttgttatttagttttaatacaactttgctcattttggactaaatat-gaccatctcatactagtatatttttccacttaattacatgtaaat |
27591397 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttt-----tatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccact |
306 |
Q |
| |
|
| ||| || | ||||||||||| |||||| ||| ||| ||| |||||||| |||||||| |||||| ||||||||||| ||||||| | |||| |
|
|
| T |
27591396 |
ttctctgtaacagatttttattgtggttgatgcattttttatttttatttttgttaacagggaactggtaaaactgaaatgatatgtatgaatttgcact |
27591297 |
T |
|
| Q |
307 |
ccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaa |
406 |
Q |
| |
|
| |||||||| || |||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||| |
|
|
| T |
27591296 |
ctatggaatctgtaatagacaagaaaggaaaggccttcaaaaagatgacaagattgaaaacacttattattgaaaatggccattgttctaaaggtctcaa |
27591197 |
T |
|
| Q |
407 |
gtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagt |
459 |
Q |
| |
|
|||||||| |||||||||| | |||||||||| ||||||||||||| |||| |
|
|
| T |
27591196 |
gtatcttcgaagcagtttgaaagcattgaaatgggaaggatgtttatcaaagt |
27591144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 12 - 455
Target Start/End: Original strand, 26804060 - 26804511
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||||||| |||| | || ||||||||||||| |||| || |||||||||| ||| ||| |||||||| |||||||||||||||||| || |
|
|
| T |
26804060 |
aagaatcacctaaagatcctgaaaaacgaagtaggttatggcgtcatgaagatatagttcatgttataaaagaaaacattgtgagtaagattgatattta |
26804159 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttctttt-cactcaattacatgttaa |
210 |
Q |
| |
|
|| ||| |||||||||| ||| |||||||||||| |||| | |||| |||| || ||||| |||||||||||| |||| |||| |||||||| | || |
|
|
| T |
26804160 |
tgttcaatttgttatttagtttagatacgactttgcatttttaggactacatat-gaccatctcatactagtatttttttttcacttaattacatataaa |
26804258 |
T |
|
| Q |
211 |
tatttctatatcttatttttattgttgttgattc----atgcttttatcttt----gttaaaagggaactagtaaaattgaaatgatatatatgaatctc |
302 |
Q |
| |
|
| | ||||||||||||| ||||||| |||||| || |||| | ||| |||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
26804259 |
tttctctatatcttattgttattgtgattgattatgttatttttttttttttttgtgttaaaagggaactagtaaaattgaaatgataaatatgaatttc |
26804358 |
T |
|
| Q |
303 |
cactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtc |
402 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
26804359 |
cactccatggaatccgtaatagaccagaaaggaaaggccttcaaaaagatgacaaaactgagaacacttatcattgaaaatggacatttttctgaaggtc |
26804458 |
T |
|
| Q |
403 |
tcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatcg |
455 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
26804459 |
tcaagtatcttccaagcagtttgatagtattgaaatggaaaggatgtttatcg |
26804511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 12 - 459
Target Start/End: Complemental strand, 27704843 - 27704378
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| | || |||||||||||| || |||| |||||||||||||||||||||||||||||| |
|
|
| T |
27704843 |
aagaatcaattaaagagcctggagaaagaagtaggttatgctgccatgatgatatagttaatgtcttaaaagaaaacactgtgagtaagattgatatcta |
27704744 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||| ||||||||| || ||||| |||||||||||| || | ||| |||| | || | | |
|
|
| T |
27704743 |
tgatcattttgttatttagttttaatatgactttgctctttttggactaaatat-gaccatctcatactagtattttttattacttaattcgaagtaagt |
27704645 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgct-------------------tttatctttgttaaaagggaactagtaaaattgaaatgatata |
292 |
Q |
| |
|
| |||||||||||| ||| |||| | ||||||||| | ||||| ||| ||||||||||||||||||||| ||||||| || |
|
|
| T |
27704644 |
ttctctatatcttatatttgttgtggctgattcatgttatttatttatttatttatttttattttttataaaagggaactagtaaaattcaaatgatgta |
27704545 |
T |
|
| Q |
293 |
tatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttt |
392 |
Q |
| |
|
||||||| | ||||||||||||||| | |||||| | ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| | |
|
|
| T |
27704544 |
tatgaattttcactccatggaatccataatagaccaaaaaggaatggccttcaagaagatgacaagattgaaaacacttatcattgaaaatggccattgt |
27704445 |
T |
|
| Q |
393 |
tctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagt |
459 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| | |||||||||| ||||||||||||| |||| |
|
|
| T |
27704444 |
tctaaaggtctcaagtatcttccaagcagtttgaaagcattgaaatgggaaggatgtttatcaaagt |
27704378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 256 - 454
Target Start/End: Original strand, 26648278 - 26648476
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
26648278 |
tttgttgaaagggaactagtaaaattgaaatgatatatatgaatttccactccatggaatccgtaatagaccagaaaggaaaggccttcaagaagatgac |
26648377 |
T |
|
| Q |
356 |
aaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatc |
454 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||| ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26648378 |
aaaactcaaaacacttatcattgaaaatggtcatttttctaaaggtcttaaatatcttccaagcagtttgagagtattgaaatggaaaggatgtttatc |
26648476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 256 - 454
Target Start/End: Original strand, 26754246 - 26754444
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
26754246 |
tttgttgaaagggaactagtaaaattgaaatgatatatatgaatttccactccatggaatccgtaatagaccagaaaggaaaggccttcaagaagatgac |
26754345 |
T |
|
| Q |
356 |
aaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatc |
454 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||| ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26754346 |
aaaactcaaaacacttatcattgaaaatggtcatttttctaaaggtcttaaatatcttccaagcagtttgagagtattgaaatggaaaggatgtttatc |
26754444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 215 - 455
Target Start/End: Original strand, 26625026 - 26625268
Alignment:
| Q |
215 |
tctatatcttatttttattgttgttgattcatgcttttatcttt-gttaaaa-gggaactagtaaaattgaaatgatatatatgaatctccactccatgg |
312 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| | ||| ||||||| |||||||||||||||||||||||||||||||||| | | ||| |||| |
|
|
| T |
26625026 |
tctatatcttatttttattgtggttgattcatgtttttcttttttgttaaaaagggaactagtaaaattgaaatgatatatatgaattttccctctatgg |
26625125 |
T |
|
| Q |
313 |
aatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatct |
412 |
Q |
| |
|
||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||||| |||||||||||||| |
|
|
| T |
26625126 |
aatccgtaatagaccagaaaggaaaggccttcaggaagatgacaaaactcaaaacacttatcattgaagatggtcggttttctaaaggtctcaagtatct |
26625225 |
T |
|
| Q |
413 |
tccgagcagtttgagtgtattgaaatggaaaggatgtttatcg |
455 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
26625226 |
tccaagcagtttgagagtattgaaatggaaaggatgtttatcg |
26625268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 215 - 455
Target Start/End: Original strand, 26731003 - 26731245
Alignment:
| Q |
215 |
tctatatcttatttttattgttgttgattcatgcttttatcttt-gttaaaa-gggaactagtaaaattgaaatgatatatatgaatctccactccatgg |
312 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| | ||| ||||||| |||||||||||||||||||||||||||||||||| | | ||| |||| |
|
|
| T |
26731003 |
tctatatcttatttttattgtggttgattcatgtttttcttttttgttaaaaagggaactagtaaaattgaaatgatatatatgaattttccctctatgg |
26731102 |
T |
|
| Q |
313 |
aatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatct |
412 |
Q |
| |
|
||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||||| |||||||||||||| |
|
|
| T |
26731103 |
aatccgtaatagaccagaaaggaaaggccttcaggaagatgacaaaactcaaaacacttatcattgaagatggtcggttttctaaaggtctcaagtatct |
26731202 |
T |
|
| Q |
413 |
tccgagcagtttgagtgtattgaaatggaaaggatgtttatcg |
455 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
26731203 |
tccaagcagtttgagagtattgaaatggaaaggatgtttatcg |
26731245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 262 - 438
Target Start/End: Original strand, 28788089 - 28788265
Alignment:
| Q |
262 |
aaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaact |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
28788089 |
aaaagggaactagtaaaattgaaatgatatatatgaatttcccctccgaggaatccgtaatagacaagaaaggaaaggccttcaagaagatgacaagatt |
28788188 |
T |
|
| Q |
362 |
gaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaat |
438 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||||||| |
|
|
| T |
28788189 |
gaaaacgcttatcattgaaaatggccatttttctaaaggtctcaactatcttccaagtagtttgagagtattgaaat |
28788265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 262 - 438
Target Start/End: Original strand, 28794210 - 28794386
Alignment:
| Q |
262 |
aaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaact |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
28794210 |
aaaagggaactagtaaaattgaaatgatatatatgaatttcccctccgaggaatccgtaatagacaagaaaggaaaggccttcaagaagatgacaagatt |
28794309 |
T |
|
| Q |
362 |
gaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaat |
438 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||||||| |
|
|
| T |
28794310 |
gaaaacgcttatcattgaaaatggccatttttctaaaggtctcaactatcttccaagtagtttgagagtattgaaat |
28794386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 12 - 427
Target Start/End: Complemental strand, 27603275 - 27602871
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||| ||| ||| ||||||||||||||||||||||||||| || |
|
|
| T |
27603275 |
aagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagacgatatagttcatgttctaacagaaaacactgtgagtaagattgatatata |
27603176 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgac-tttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaa |
210 |
Q |
| |
|
|||| |||||||||| |||||||| ||| |||| |||||||| |||||||| ||||||||| |||||| ||||| ||| |||| ||||||||| |
|
|
| T |
27603175 |
atatcaatttgttatttagttttaatatgacttttggtctttttggactaaata-tgatcatctcatactattatttttttccacttaattacatg---- |
27603081 |
T |
|
| Q |
211 |
tatttctatatcttatttttattgttgttgattc-atgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactcca |
309 |
Q |
| |
|
||| |||||| |||||| ||| |||| | |||||| ||| ||||||||||||||| || |||||||||||| || ||||| | ||| | |
|
|
| T |
27603080 |
--------tatattatttatattgtggtttattctgttgttttatttttcttaaaagggaactaggaacattgaaatgatacatttgaattgtccctcaa |
27602989 |
T |
|
| Q |
310 |
tggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagta |
409 |
Q |
| |
|
||||| ||| ||||| ||| ||||||||| | |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||| | || |
|
|
| T |
27602988 |
tggaaaacgtaatagagtggaatggaaaggccatgaagaagatgacaaatctcaaaacacttatcattgaaaatggtcagttttctagaggtcctgacta |
27602889 |
T |
|
| Q |
410 |
tcttccgagcagtttgag |
427 |
Q |
| |
|
|||||| || |||||||| |
|
|
| T |
27602888 |
tcttccaagtagtttgag |
27602871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 82 - 386
Target Start/End: Complemental strand, 27426125 - 27425816
Alignment:
| Q |
82 |
agaaaacactgtgagtaagattgatatctatgatcattttgttattt-gcttttaatacgactttgctctttttgcactaaatattgat-catctgatac |
179 |
Q |
| |
|
||||||||||||||||||||||||||| | || || |||||||||| |||||||| | |||||||||||||||| | || ||| | |||||||||| |
|
|
| T |
27426125 |
agaaaacactgtgagtaagattgatatgcaggaacaatttgttatttagcttttaacatgactttgctctttttgga-tatgtatacaagcatctgatac |
27426027 |
T |
|
| Q |
180 |
tagtatttcttttcactcaattacatgttaatatttctatatcttatttttattgttgttgattcatgcttttatcttt------gttaaaagggaacta |
273 |
Q |
| |
|
|| || ||||||||| | ||||||| | ||| |||| |||||||||| |||||| |||||||||| |||| | ||| ||||||||||||| | |
|
|
| T |
27426026 |
tactaattcttttcagttaattacacataaat--ttctctatcttatttgtattgtggttgattcatcttttttttttttttttcgttaaaagggaacca |
27425929 |
T |
|
| Q |
274 |
gtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttat |
373 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| | || ||||| |||| |
|
|
| T |
27425928 |
gtaaaattgaaatgatatatatgaatttgcactctatggaatccgtaatagacaagaatggaaaggccttcaagaagatgacacacctcaaaacgtttat |
27425829 |
T |
|
| Q |
374 |
cattgaaaatggc |
386 |
Q |
| |
|
| |||||||||| |
|
|
| T |
27425828 |
tactgaaaatggc |
27425816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 28787855 - 28788035
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||| || |
|
|
| T |
28787855 |
aagaatcgcctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttaatgttttaaaagaaaacaccgtgagtatgattgatattta |
28787954 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttc |
193 |
Q |
| |
|
|| ||| |||||||||| |||| |||||||||||||||||||| |||||||| ||| ||||| |||||||||||| ||||| |
|
|
| T |
28787955 |
tgttcaatttgttatttaattttgatacgactttgctctttttggactaaata-tgaccatctcatactagtatttgttttc |
28788035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 28793976 - 28794156
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||| || |
|
|
| T |
28793976 |
aagaatcgcctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttaatgttttaaaagaaaacaccgtgagtatgattgatattta |
28794075 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttc |
193 |
Q |
| |
|
|| ||| |||||||||| |||| |||||||||||||||||||| |||||||| ||| ||||| |||||||||||| ||||| |
|
|
| T |
28794076 |
tgttcaatttgttatttaattttgatacgactttgctctttttggactaaata-tgaccatctcatactagtatttgttttc |
28794156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 26624864 - 26625007
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| ||||| |||| ||||||||| ||| ||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
26624864 |
aagaatcacctaaagagcctggagaacgaagtagattatggtgtcaagatgatatatttcatgttttaaaagaaaacagtgtgagtaagattgatatcta |
26624963 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttg |
155 |
Q |
| |
|
|||||| ||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
26624964 |
tgatcaatttattatttagttttaatactactttgctctttttg |
26625007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 26730841 - 26730984
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| ||||| |||| ||||||||| ||| ||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
26730841 |
aagaatcacctaaagagcctggagaacgaagtagattatggtgtcaagatgatatatttcatgttttaaaagaaaacagtgtgagtaagattgatatcta |
26730940 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttg |
155 |
Q |
| |
|
|||||| ||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
26730941 |
tgatcaatttattatttagttttaatactactttgctctttttg |
26730984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 256 - 442
Target Start/End: Original strand, 26813339 - 26813525
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||| ||| | | | | | |||| |||||| ||| ||||||||||||||||||||||| |
|
|
| T |
26813339 |
tttgttaaaagggaactagtaaaattgaaatgatatatctaaatttccccacaaagaattccgagatagattggaatggaaaggccttcaagaagatgac |
26813438 |
T |
|
| Q |
356 |
aaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaa |
442 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || ||||||| |||| |||| ||||||| || | |||||| |||||||| ||||| |
|
|
| T |
26813439 |
aaaactcaaaacacttattattgaaaatggtcaattttctaaaggtcccaagcatcttcctagtactttgagagtattgaagtggaa |
26813525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 256 - 449
Target Start/End: Original strand, 26885915 - 26886108
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaa-tctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatga |
354 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| |||| | ||| | | |||||| |||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
26885915 |
tttgttaaaagggaactagcaacattgaaatgatatatctgaactgtcc-cgcaatggaacccgtaatagactgtaatggaaagtccttcaagaagatga |
26886013 |
T |
|
| Q |
355 |
caaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgt |
449 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| | |||| ||||||||||| | |||||||| ||||| ||||||||||||||| |
|
|
| T |
26886014 |
caaaactcaaaactcttatcattgaaaatggccatttttccaaaggtccgaagtatcttccaaatagtttgagagtatttaaatggaaaggatgt |
26886108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 26648072 - 26648209
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||| |||| ||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
26648072 |
aagaatcacgtaaagagcctggagaacaaagtaggttatggtgtcaagatgaaatagttcatgttttaaaagaaaacactgtgagtaagattaatatcta |
26648171 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctc |
149 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
26648172 |
tgatcaatttgttatttagttttaatacgactttgctc |
26648209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 26754040 - 26754177
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||| |||| ||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
26754040 |
aagaatcacgtaaagagcctggagaacaaagtaggttatggtgtcaagatgaaatagttcatgttttaaaagaaaacactgtgagtaagattaatatcta |
26754139 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctc |
149 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
26754140 |
tgatcaatttgttatttagttttaatacgactttgctc |
26754177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 256 - 447
Target Start/End: Complemental strand, 27663535 - 27663347
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| || | | ||| || | ||||||||| |||||||||| |
|
|
| T |
27663535 |
tttgttaaaagggaactagtaaaattgaaatgatatatctgaattgttcctcaatggaacccatca---acatcaatgaaaaggcctttaagaagatgaa |
27663439 |
T |
|
| Q |
356 |
aaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggat |
447 |
Q |
| |
|
|||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
27663438 |
aaaactcaaaacacttatcattgaaaagggctatttttctaaaggtctcaagtatcttccaaaaagtttgatagtattgaaatggaaaggat |
27663347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 25491637 - 25491522
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||| ||| ||| ||||||||||||||| ||| |
|
|
| T |
25491637 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatttcccctccatggaattcgaaatagactggaatggagaggccttcaagaagacgac |
25491538 |
T |
|
| Q |
356 |
aaaactgaaaacactt |
371 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
25491537 |
aaaactcaaaacactt |
25491522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 447
Target Start/End: Original strand, 26863439 - 26863630
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| || || | || | |||| |||| |||||| ||| |||||||||||||||||||||| |
|
|
| T |
26863439 |
tttgtgaaaagggaactagtaaaattgaaatggtatatctgcattgtccttcaacggaacccgtaatagactggaatggaaaggccttcaagaagatgaa |
26863538 |
T |
|
| Q |
356 |
aaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggat |
447 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||| |||| ||| || ||| | || ||||||| ||||| ||||||||||||| |
|
|
| T |
26863539 |
aaaactcaaaacacttgtcattgaaaatggccatttttctaaaggtcccaaatacctttcaagttgtttgagagtattaaaatggaaaggat |
26863630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 256 - 425
Target Start/End: Original strand, 26960920 - 26961086
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaat-ctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatga |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||| || |||| ||||| ||| | |||||| ||||||||||||| |
|
|
| T |
26960920 |
tttgttaaaagggaactagtaaaattgaaatgatatatttgaattctcc-ctcaatgaaacccgt---agacatgaatgaaaaggcattcaagaagatga |
26961015 |
T |
|
| Q |
355 |
caaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttg |
425 |
Q |
| |
|
|||| || ||||||||||||||||| || ||| ||||||||| |||| |||||||||||| || |||||| |
|
|
| T |
26961016 |
caaatctcaaaacacttatcattgagaaaggcaatttttctaaaggtcccaagtatcttccaagtagtttg |
26961086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 223 - 441
Target Start/End: Original strand, 26850468 - 26850688
Alignment:
| Q |
223 |
ttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaa---tctccactccatggaatccgt |
319 |
Q |
| |
|
|||||| |||||| ||||||| ||| |||| | |||||| |||||||| ||||||||||||||||||| | |||| || | ||| | |||| | || |
|
|
| T |
26850468 |
ttatttgtattgtggttgattaatgttttttt-tttgtttaaagggaagtagtaaaattgaaatgataattctgaaatatcgtccctcaacggaacctgt |
26850566 |
T |
|
| Q |
320 |
gatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagc |
419 |
Q |
| |
|
||||||| ||| | |||||||||||||||||||||||| || |||||||||||| ||||| ||| | ||||||||| |||| ||||||||||||||| |
|
|
| T |
26850567 |
aatagacatgaatgaaaaggccttcaagaagatgacaaatctcaaaacacttatcgttgaagatgacaatttttctaaaggtcccaagtatcttccgagt |
26850666 |
T |
|
| Q |
420 |
agtttgagtgtattgaaatgga |
441 |
Q |
| |
|
|||||||| |||||| |||||| |
|
|
| T |
26850667 |
agtttgagagtattggaatgga |
26850688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 449
Target Start/End: Original strand, 26657820 - 26658010
Alignment:
| Q |
259 |
gttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaa |
358 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||| ||||| | ||| |||||| || | |||||| ||| |||||| |||||| |||||||||||| |
|
|
| T |
26657820 |
gttaaaagggaaccagtaacattgaaatgatatatctgaattgtccctcgatggaaaccataatagactggaatggaaagcccttcaggaagatgacaaa |
26657919 |
T |
|
| Q |
359 |
actgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgt |
449 |
Q |
| |
|
|| ||||| ||||||||||||||||||| |||||||| |||| || ||||||| || |||||||| | |||||||||||||||||| |
|
|
| T |
26657920 |
tctcaaaactcttatcattgaaaatggccgtttttctaaaggtccaaaacatcttccaagtagtttgagatttttgaaatggaaaggatgt |
26658010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 449
Target Start/End: Original strand, 26763791 - 26763981
Alignment:
| Q |
259 |
gttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaa |
358 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||| ||||| | ||| |||||| || | |||||| ||| |||||| |||||| |||||||||||| |
|
|
| T |
26763791 |
gttaaaagggaaccagtaacattgaaatgatatatctgaattgtccctcgatggaaaccataatagactggaatggaaagcccttcaggaagatgacaaa |
26763890 |
T |
|
| Q |
359 |
actgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgt |
449 |
Q |
| |
|
|| ||||| ||||||||||||||||||| |||||||| |||| || ||||||| || |||||||| | |||||||||||||||||| |
|
|
| T |
26763891 |
tctcaaaactcttatcattgaaaatggccgtttttctaaaggtccaaaacatcttccaagtagtttgagatttttgaaatggaaaggatgt |
26763981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 27216377 - 27216491
Alignment:
| Q |
333 |
ggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtat |
432 |
Q |
| |
|
||||||||||||| |||||||| ||| || |||||| ||||||||||||||||||||||||||| |||| ||| |||||||| || |||||||| | | |
|
|
| T |
27216377 |
ggaaaggccttcacgaagatgaaaaatctcaaaacatttatcattgaaaatggccatttttctaaaggtcccaattatcttccaagtagtttgagatttt |
27216476 |
T |
|
| Q |
433 |
tgaaatggaaaggat |
447 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27216477 |
ggaaatggaaaggat |
27216491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 263 - 440
Target Start/End: Original strand, 26825668 - 26825845
Alignment:
| Q |
263 |
aaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactg |
362 |
Q |
| |
|
|||||||||||||||| | |||||| ||||||||||| ||| ||||| | || | || ||||| ||| |||||||| |||| |||||||||||| || |
|
|
| T |
26825668 |
aaagggaactagtaaagtcgaaatgctatatatgaatttcccctccaagaaaactgtaatagattggaatggaaaggctttcatgaagatgacaaatctc |
26825767 |
T |
|
| Q |
363 |
aaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatgg |
440 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||| |||| |||| || || || |||||||| |||||||||||| |
|
|
| T |
26825768 |
aaaacacttattattaaaaagggccatttttctaaaggtccagagtacctcccaagtagtttgagagtattgaaatgg |
26825845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 437
Target Start/End: Complemental strand, 27529624 - 27529444
Alignment:
| Q |
257 |
ttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgaca |
356 |
Q |
| |
|
||||||||||||||| || ||||| |||||||| ||||||| ||| |||||||||||| | || || ||| ||||| |||||| ||||||||||| |
|
|
| T |
27529624 |
ttgttaaaagggaacaaggaaaatcaaaatgataaatatgaaattcccctccatggaatctgatattgattggaatggaaatgccttcgagaagatgaca |
27529525 |
T |
|
| Q |
357 |
aaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaa |
437 |
Q |
| |
|
|| || |||||| |||| | ||||||||||||| ||||| ||||| |||||||||| || |||||||| ||| ||||| |
|
|
| T |
27529524 |
aacctcaaaacatttattactgaaaatggccatcattctaaaagtctcgagtatcttccaagtagtttgagggtaatgaaa |
27529444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 26813151 - 26813250
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| || |||| || |||||| |||||||| |||| |||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
26813151 |
aagaatcacctgaagaaccaggagaacgaagtaggctatggtgtcaagatgatatagttcatgttttaaaagaaaacattgtgagtaagattgatatcta |
26813250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 26863173 - 26863315
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||| |||||||||| || ||| ||||||||||||| |||| ||||||||| | | |||||| ||||||||||||||||||||||||||| || |
|
|
| T |
26863173 |
aagaatctcctaaagagccgggtgaacgaagtaggttatggtgtcatgatgatataatccacgttttagaagaaaacactgtgagtaagattgatattta |
26863272 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctcttttt |
154 |
Q |
| |
|
||| || | ||||||| | ||||| || ||||||||| |||| |
|
|
| T |
26863273 |
tgaacaatctgttattagtctttaacacaactttgctcgtttt |
26863315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 26637369 - 26637453
Alignment:
| Q |
215 |
tctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaat |
299 |
Q |
| |
|
|||||||||||||| |||||| |||||| || | || | |||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
26637369 |
tctatatcttatttgtattgtcattgattaattttattttttttgttaaaagggaactagtaaaattcaaatgatatatctgaat |
26637453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 26743335 - 26743419
Alignment:
| Q |
215 |
tctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaat |
299 |
Q |
| |
|
|||||||||||||| |||||| |||||| || | || | |||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
26743335 |
tctatatcttatttgtattgtcattgattaattttattttttttgttaaaagggaactagtaaaattcaaatgatatatctgaat |
26743419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 27529838 - 27529741
Alignment:
| Q |
61 |
tgatatagttcgggttttaagagaaaacactgtgagtaagattgatatctatgatcattttgtta---tttgcttttaatacgactttgctctttttg |
155 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||||||||||||||||||| || || ||||||| || |||||||| | ||| |||||||||||| |
|
|
| T |
27529838 |
tgatatagttcatgttttaaaaaaaaacactgtgagtaagattgatatctaggaacaatttgttaaatttagcttttaacatgacattgctctttttg |
27529741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 25491887 - 25491785
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||| || ||||||||| | |||||||| || ||| |||||||| |||| ||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
25491887 |
aagaatcacgtaatgatcctggagaacgtagtaggttgtggtgtcccgatgatatggttcaagttttaagagaaaacacggtaagtaagattgatatcta |
25491788 |
T |
|
| Q |
112 |
tga |
114 |
Q |
| |
|
||| |
|
|
| T |
25491787 |
tga |
25491785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 394
Target Start/End: Original strand, 26938890 - 26939020
Alignment:
| Q |
264 |
aagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactga |
363 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||| || ||| || ||| | | | ||| ||| || ||||||||||||||||||| ||| || | |
|
|
| T |
26938890 |
aaggaaactagtaaaattgaaatgatatatttgaatggcccctcaattgaagtcctaagagattggaatggtaaggccttcaagaagatgaaaaatctta |
26938989 |
T |
|
| Q |
364 |
aaacacttatcattgaaaatggccatttttc |
394 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||| |
|
|
| T |
26938990 |
aaacacttatcattaaaagtggtcatttttc |
26939020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 26951591 - 26951628
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatat |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26951591 |
tttgttaaaagggaactagtaaaattgaaatgatatat |
26951628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 26979230 - 26979267
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatat |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26979230 |
tttgttaaaagggaactagtaaaattgaaatgatatat |
26979267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 26885684 - 26885743
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttc |
71 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||||||||| |||| ||||||||||||| |
|
|
| T |
26885684 |
aagaatcaagtaaagagcctggagaacgtagtaggttatggtgtcacgatgatatagttc |
26885743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 27663783 - 27663671
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||| ||||||||||||||| | | |||||| || |||| |||||||||| || ||||||| | ||||||| ||||||||||||||||| |
|
|
| T |
27663783 |
aagaatcaattaaagagcctggagagcgcactaggttgtggcgtcatgatgatatagctcatgttttaaaacaaaacac----agtaagattgatatcta |
27663688 |
T |
|
| Q |
112 |
tgatcattttgttattt |
128 |
Q |
| |
|
||| || |||||||||| |
|
|
| T |
27663687 |
tgaacaatttgttattt |
27663671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 425
Target Start/End: Original strand, 26979299 - 26979406
Alignment:
| Q |
321 |
atagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaa---aatggccatttttctagtggtctcaagtatcttccga |
417 |
Q |
| |
|
||||||| ||| | |||||| ||||||||||||||||| || ||||||||||||||| || ||||| ||||||||| |||| || ||||||||| | |
|
|
| T |
26979299 |
atagacatgaatgaaaaggcattcaagaagatgacaaatctcaaaacacttatcattcaagctgatggcaatttttctaaaggtcccaggtatcttccaa |
26979398 |
T |
|
| Q |
418 |
gcagtttg |
425 |
Q |
| |
|
| |||||| |
|
|
| T |
26979399 |
gtagtttg |
26979406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 27216300 - 27216342
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaa |
298 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||| |||| |
|
|
| T |
27216300 |
tttgttaaaagggaacttggaaaattgaaatgatatatttgaa |
27216342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 25484978 - 25485019
Alignment:
| Q |
344 |
caagaagatgacaaaactgaaaacacttatcattgaaaatgg |
385 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
25484978 |
caagaagatgacaaatctcaaaacacttatcattgaagatgg |
25485019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 25512809 - 25512845
Alignment:
| Q |
344 |
caagaagatgacaaaactgaaaacacttatcattgaa |
380 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| |
|
|
| T |
25512809 |
caagaagatgacaaatctcaaaacacttatcattgaa |
25512845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 26144787 - 26144823
Alignment:
| Q |
344 |
caagaagatgacaaaactgaaaacacttatcattgaa |
380 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| |
|
|
| T |
26144787 |
caagaagatgacaaatctcaaaacacttatcattgaa |
26144823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 318; Significance: 1e-179; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 12 - 465
Target Start/End: Complemental strand, 29272418 - 29271966
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29272418 |
aagaatcaattaaagagcctggagaaagaagtaggttatgctgccaggatgatctagttcgtgttttaagagaaaacactgtgagtaagattgatatcta |
29272319 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||| |
|
|
| T |
29272318 |
tgatcattttgttatttagttttaatacgactttgctctttttggactaaatatt-atcatctgatactagcatttattttcactcaattgcatgttaat |
29272220 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatg |
311 |
Q |
| |
|
|||| || |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
29272219 |
atttgtacatcttatttttattgtggttgattcatatttttttctttgttaaaagggaactagtaaaattgaaatgatatatacgaatctccattccata |
29272120 |
T |
|
| Q |
312 |
gaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatc |
411 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||| | ||||||||| || |
|
|
| T |
29272119 |
gaatctgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactcaaaacagttatcttcgaaaatggccatttttctggaggtctcaagcatt |
29272020 |
T |
|
| Q |
412 |
ttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
465 |
Q |
| |
|
| || || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29272019 |
taccaagaagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
29271966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 22023221 - 22023271
Alignment:
| Q |
405 |
aagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatcg |
455 |
Q |
| |
|
|||||| |||| ||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
22023221 |
aagtattttccaagcggtctgagtgtattaaaatggaaaggatgtttatcg |
22023271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 12 - 447
Target Start/End: Complemental strand, 266929 - 266501
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| | |
|
|
| T |
266929 |
aagaatcacctaaagagcctggagaacgaagtaggttatggtgtcaagatgatatagttcatgttttaaataaaaacactgtgagtaagattgatatcaa |
266830 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttcactcaattacatgttaat |
211 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||| || |||||| || ||||| |||||||||||| || | |||||||| | | |
|
|
| T |
266829 |
tgatcaatttgttatttagttttaatacgactttgctctttttggacaaaatat-gaccatctcatactagtatttattat-------ttacatgtaagt |
266738 |
T |
|
| Q |
212 |
atttctatatcttatttttattgttgttgattcatgcttttatcttt-gttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccat |
310 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
266737 |
ttatctatatcttatttttattgttgttgattcatgtttttttgttttgttaaaagggaactagtaaagttgaaatgatatatatgaatttccactcgat |
266638 |
T |
|
| Q |
311 |
ggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtat |
410 |
Q |
| |
|
|||| | || |||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||| ||||| ||||| |
|
|
| T |
266637 |
ggaacctgtaatagaccagaaaggaaaggccttcaagaagatgacaaatctcaaaacacttgtcattgaaaatgggcatttttctaaaggtctgaagtac |
266538 |
T |
|
| Q |
411 |
cttccgagcagtttgagtgtattgaaatggaaaggat |
447 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| |
|
|
| T |
266537 |
cttcgaagcagtttgaaagtattgaaatggaaaggat |
266501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 447
Target Start/End: Complemental strand, 28126018 - 28125827
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| |||| | ||| |||||| || | |||||| ||| |||| ||||||||||||||| | |
|
|
| T |
28126018 |
tttgttaaaagggaactggtaacattgaaatgatatattggaattatccctctatggaacccataatagactggaatcgaaaagccttcaagaagatgtc |
28125919 |
T |
|
| Q |
356 |
aaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggat |
447 |
Q |
| |
|
||| || ||||||||||| || ||||||| || || || | ||| |||||||||||| || | |||||| ||||||| |||| |||||| |
|
|
| T |
28125918 |
aaatcttaaaacacttattataaaaaatggtcaattctccaaaagtcccaagtatcttccaagtactttgagagtattgatatgggaaggat |
28125827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 28131837 - 28131722
Alignment:
| Q |
256 |
tttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgac |
355 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||| | | ||| ||||| |||||| |||| |||||| ||| ||| |||||||||||||||| | |
|
|
| T |
28131837 |
tttgttaaaagggaactggaaaaattgaaatgatatgtcttaattgtcactcaatggaacccgtaatagactggaatcgaatggccttcaagaagatgtc |
28131738 |
T |
|
| Q |
356 |
aaaactgaaaacactt |
371 |
Q |
| |
|
||| || ||||||||| |
|
|
| T |
28131737 |
aaatcttaaaacactt |
28131722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1870 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold1870
Description:
Target: scaffold1870; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 12 - 438
Target Start/End: Original strand, 383 - 792
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
383 |
aagaatcgcctaaagagccaggagaaagaagtaggttatggtgtcaagatgatatagttaatgttttaaaagaaaacactgtgagtaagattgatatcta |
482 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttcttttc-actcaattacatgttaa |
210 |
Q |
| |
|
|| ||| |||||||||| |||| ||| |||||||||||||||| ||||||||| || ||||| |||||||||||| ||||| ||| |||||||||| || |
|
|
| T |
483 |
tgttcaatttgttatttagttttgatatgactttgctctttttggactaaatat-gaccatctcatactagtattttttttccacttaattacatgtaaa |
581 |
T |
|
| Q |
211 |
tatttctatatcttatttttattgttgttgattcatgcttttatctttgtt--aaaagggaactagtaaaattgaaatgatatatatgaatctccactcc |
308 |
Q |
| |
|
| ||| || ||||||||||| |||| | || || ||||||||||||| |||||||||||||||||||||||| ||| ||| |
|
|
| T |
582 |
t--ttc-----------------gtggttgattcatgttttttttttcttttcaaaagggaactagaaaaattgaaatgatatatatgaatttcccctct |
662 |
T |
|
| Q |
309 |
atggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagt |
408 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
663 |
gaggaattcgtaatagacaagaaaggaaaggccttcaagaagatgacaagactgaaaacgcttatcattgaaaatgaccatttttctaaaggtctcaagt |
762 |
T |
|
| Q |
409 |
atcttccgagcagtttgagtgtattgaaat |
438 |
Q |
| |
|
||||||| ||||||||||| |||||||||| |
|
|
| T |
763 |
atcttccaagcagtttgagagtattgaaat |
792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 158; Significance: 7e-84; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 12 - 438
Target Start/End: Original strand, 9101 - 9511
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9101 |
aagaatcgcctaaagagccaggagaaagaagtaggttatggtgtcaagatgatatagttaatgttttaaaagaaaacactgtgagtaagattgatatcta |
9200 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttctttt--cactcaattacatgtta |
209 |
Q |
| |
|
|| ||| |||||||||| |||| ||| |||||||||||||||| ||||||||| || ||||| ||| |||||||| |||| |||| |||||||||| | |
|
|
| T |
9201 |
tgttcaatttgttatttagttttgatatgactttgctctttttggactaaatat-gaccatctcatattagtatttttttttccacttaattacatgtaa |
9299 |
T |
|
| Q |
210 |
atatttctatatcttatttttattgttgttgattcatgcttttatctttgtt--aaaagggaactagtaaaattgaaatgatatatatgaatctccactc |
307 |
Q |
| |
|
|| ||| || ||||||||||| |||| | || || ||||||||||||| |||||||||||||||||||||||| ||| ||| |
|
|
| T |
9300 |
at--ttc-----------------gtggttgattcatgttttttttttcttttcaaaagggaactagaaaaattgaaatgatatatatgaatttcccctc |
9380 |
T |
|
| Q |
308 |
catggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaag |
407 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
9381 |
tgaggaattcgtaatagacaagaaaggaaaggccttcaagaagatgacaagactgaaaacgcttatcattgaaaatgtccatttttctaaaggtctcaag |
9480 |
T |
|
| Q |
408 |
tatcttccgagcagtttgagtgtattgaaat |
438 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |
|
|
| T |
9481 |
tatcttccaagcagtttgagagtattgaaat |
9511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 125; Significance: 3e-64; HSPs: 4)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 262 - 454
Target Start/End: Complemental strand, 12014 - 11822
Alignment:
| Q |
262 |
aaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaact |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
12014 |
aaaagggaactagtaaaattgaaatgatatatatgaatttcccctctgaggaattcgtaatagacaagaaaggaaaggccttcaagaagatgacaagact |
11915 |
T |
|
| Q |
362 |
gaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatc |
454 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
11914 |
gaaaacgcttatcattgaaaatggccatttttctaaaggtctcaagtatcttccaagcagtttgagagtattgaaattacatggatgtttatc |
11822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 262 - 438
Target Start/End: Complemental strand, 3051 - 2875
Alignment:
| Q |
262 |
aaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaact |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3051 |
aaaagggaactagtaaaattgaaatgatatatatgaatttcccctctgaggaattcgtaatagacaagaaaggaaaggccttcaagaagatgacaagact |
2952 |
T |
|
| Q |
362 |
gaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaat |
438 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
2951 |
gaaaacgcttatcattgaaaatgtccatttttctaaaggtctcaagtatcttccaagcagtttgagagtattgaaat |
2875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 3272 - 3088
Alignment:
| Q |
23 |
aaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatctatgatcattttg |
122 |
Q |
| |
|
||||||||||||||||||||||| ||||| || | |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
3272 |
aaagagcctggagaaagaagtagattatggtgtgaagatgatatagttaatgttttaaaagaaaacactgtgagtaagattgatatctatgttcaatttg |
3173 |
T |
|
| Q |
123 |
ttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttctttt-cactcaattacatgt |
207 |
Q |
| |
|
|||||| |||| ||| |||||||||||||||| |||||||| ||| ||||| |||||||||||| |||| |||| |||||||||| |
|
|
| T |
3172 |
ttatttagttttgatatgactttgctctttttggactaaata-tgaccatctcatactagtattttttttccacttaattacatgt |
3088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 12235 - 12051
Alignment:
| Q |
23 |
aaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatctatgatcattttg |
122 |
Q |
| |
|
||||||||||||||||||||||| ||||| || | |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
12235 |
aaagagcctggagaaagaagtagattatggtgtgaagatgatatagttaatgttttaaaagaaaacactgtgagtaagattgatatctatgttcaatttg |
12136 |
T |
|
| Q |
123 |
ttatttgcttttaatacgactttgctctttttgcactaaatattgatcatctgatactagtatttctttt-cactcaattacatgt |
207 |
Q |
| |
|
|||||| |||| ||| |||||||||||||||| |||||||| ||| ||||| |||||||||||| |||| |||| |||||||||| |
|
|
| T |
12135 |
ttatttagttttgatatgactttgctctttttggactaaata-tgaccatctcatactagtattttttttccacttaattacatgt |
12051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 2119 - 1976
Alignment:
| Q |
12 |
aagaatcaactaaagagcctggagaaagaagtaggttatgcagtcaggatgatatagttcgggttttaagagaaaacactgtgagtaagattgatatcta |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2119 |
aagaatcaattaaagagcctggagaaagaagtaggttatgctgtcaggatgatatagttcgtgttttaagagaaaacactgtgagtaagattgatatcta |
2020 |
T |
|
| Q |
112 |
tgatcattttgttatttgcttttaatacgactttgctctttttg |
155 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
2019 |
tgatcattttgttatttagttttaatacaactttgctctttttg |
1976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 15252 - 15318
Alignment:
| Q |
399 |
ggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
465 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15252 |
ggtctcaagtatcttccaagcagtttgagtgtattgaaatggaaaggatgtttatcgaagtgtctgt |
15318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 215 - 449
Target Start/End: Complemental strand, 17991586 - 17991355
Alignment:
| Q |
215 |
tctatatcttatttttattgttgttgattcatgcttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaa |
314 |
Q |
| |
|
||||| |||||||| |||||| |||||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||| || | |||||| || |
|
|
| T |
17991586 |
tctatttcttatttgtattgtggttgattcattttttt---tttgttcgaagggaactagtaaaattgaaatgatatatacgaatttcgattccatgaaa |
17991490 |
T |
|
| Q |
315 |
tccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttc |
414 |
Q |
| |
|
||||| | || | ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||| |
|
|
| T |
17991489 |
tccgtaacagtctggaatggaaaggccttcaagaagatgaaaaaactcaaaacacttatcattgaaaatgaccatttttctgaaggtcccaagtatcttc |
17991390 |
T |
|
| Q |
415 |
cgagcagtttgagtgtattgaaatggaaaggatgt |
449 |
Q |
| |
|
| | |||||||| ||||||||||||||||||||| |
|
|
| T |
17991389 |
caaatagtttgagagtattgaaatggaaaggatgt |
17991355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 82 - 386
Target Start/End: Original strand, 61238 - 61547
Alignment:
| Q |
82 |
agaaaacactgtgagtaagattgatatctatgatcattttgttattt-gcttttaatacgactttgctctttttgcactaaatattgat-catctgatac |
179 |
Q |
| |
|
||||||||||||||||||||||||||| | || || |||||||||| |||||||| | |||||||||||||||| | || ||| | |||||||||| |
|
|
| T |
61238 |
agaaaacactgtgagtaagattgatatgcaggaacaatttgttatttagcttttaacatgactttgctctttttgga-tatgtatacaagcatctgatac |
61336 |
T |
|
| Q |
180 |
tagtatttcttttcactcaattacatgttaatatttctatatcttatttttattgttgttgattcatgcttttatcttt------gttaaaagggaacta |
273 |
Q |
| |
|
|| || ||||||||| | ||||||| | ||| |||| |||||||||| |||||| |||||||||| |||| | ||| ||||||||||||| | |
|
|
| T |
61337 |
tactaattcttttcagttaattacacataaat--ttctctatcttatttgtattgtggttgattcatcttttttttttttttttcgttaaaagggaacca |
61434 |
T |
|
| Q |
274 |
gtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttat |
373 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| | || ||||| |||| |
|
|
| T |
61435 |
gtaaaattgaaatgatatatatgaatttgcactctatggaatccgtaatagacaagaatggaaaggccttcaagaagatgacacacctcaaaacgtttat |
61534 |
T |
|
| Q |
374 |
cattgaaaatggc |
386 |
Q |
| |
|
| |||||||||| |
|
|
| T |
61535 |
tactgaaaatggc |
61547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 82 - 386
Target Start/End: Original strand, 18075430 - 18075739
Alignment:
| Q |
82 |
agaaaacactgtgagtaagattgatatctatgatcattttgttattt-gcttttaatacgactttgctctttttgcactaaatattgat-catctgatac |
179 |
Q |
| |
|
||||||||||||||||||||||||||| | || || |||||||||| |||||||| | |||||||||||||||| | || ||| | |||||||||| |
|
|
| T |
18075430 |
agaaaacactgtgagtaagattgatatgcaggaacaatttgttatttagcttttaacatgactttgctctttttgga-tatgtatacaagcatctgatac |
18075528 |
T |
|
| Q |
180 |
tagtatttcttttcactcaattacatgttaatatttctatatcttatttttattgttgttgattcatgcttttatctttgtt------aaaagggaacta |
273 |
Q |
| |
|
|| || ||||||||| | ||||||| | ||| |||| |||||||||| |||||| |||||||||| |||| | ||| || |||||||||| | |
|
|
| T |
18075529 |
tactaattcttttcagttaattacacataaat--ttctctatcttatttgtattgtggttgattcatctttttttttttttttcgtttaaaagggaacca |
18075626 |
T |
|
| Q |
274 |
gtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaaaactgaaaacacttat |
373 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| | || ||||| |||| |
|
|
| T |
18075627 |
gtaaaattgaaatgatatatatgaatttgcactctatggaatccgtaatagacaagaatggaaaggccttcaagaagatgacacacctcaaaacgtttat |
18075726 |
T |
|
| Q |
374 |
cattgaaaatggc |
386 |
Q |
| |
|
| |||||||||| |
|
|
| T |
18075727 |
tactgaaaatggc |
18075739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 258 - 450
Target Start/End: Complemental strand, 18677958 - 18677766
Alignment:
| Q |
258 |
tgttaaaagggaactagtaaaattgaaatgatatatatgaat-ctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgaca |
356 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||||| |||| ||| ||||| || |||||| ||| |||||| ||||||||||||||||| |
|
|
| T |
18677958 |
tgttaaaagggaacaagtaaaattgagatgatatatctgaattctcc-ctcaatggatctggtaatagactggaatggaaagaccttcaagaagatgaca |
18677860 |
T |
|
| Q |
357 |
aaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtt |
450 |
Q |
| |
|
|| || ||||||||||| |||||||||| | |||||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||| |
|
|
| T |
18677859 |
aatctcaaaacacttattattgaaaatgtctctttttctaaaggtctcaagtatcttccaaggagtttgagagtattgaaatggaatggatgtt |
18677766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 258 - 450
Target Start/End: Complemental strand, 18697800 - 18697608
Alignment:
| Q |
258 |
tgttaaaagggaactagtaaaattgaaatgatatatatgaat-ctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgaca |
356 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||| | |||| ||| | ||| |||| |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
18697800 |
tgttaaaagggaacaagtaaaattgagatgatatatctgagttctcc-ctcaacggatcccgtaatagactggaatggaaaggccttcaagaagatgaca |
18697702 |
T |
|
| Q |
357 |
aaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtt |
450 |
Q |
| |
|
|| || ||||||||||| |||||||||| | |||||||| | || |||||||||||| ||||||||||| |||||||||| ||| ||||||| |
|
|
| T |
18697701 |
aatctcaaaacacttattattgaaaatgtctctttttctaaagatcccaagtatcttccaagcagtttgagagtattgaaattgaatggatgtt |
18697608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 249 - 450
Target Start/End: Complemental strand, 18653885 - 18653684
Alignment:
| Q |
249 |
ttttatctttgttaaaagggaactagtaaaattgaaatgatatatatgaat-ctccactccatggaatccgtgatagacaagaaaggaaaggccttcaag |
347 |
Q |
| |
|
|||| ||| |||||||||||||| ||||||||||| ||||||||| ||||| |||| ||| ||||| || |||||| ||| ||||||||||||||| |
|
|
| T |
18653885 |
ttttttctctgttaaaagggaacaagtaaaattgagatgatatatctgaattctcc-ctcaatggatctggtaatagactggaatggaaaggccttcaag |
18653787 |
T |
|
| Q |
348 |
aagatgacaaaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggat |
447 |
Q |
| |
|
||||||||||| || ||||||||||| ||| |||||| | |||||||| | || |||||||||||| ||||||||||| |||||||||| ||| |||| |
|
|
| T |
18653786 |
aagatgacaaatctcaaaacacttattattaaaaatgtctctttttctaaagatcccaagtatcttccaagcagtttgagagtattgaaattgaatggat |
18653687 |
T |
|
| Q |
448 |
gtt |
450 |
Q |
| |
|
||| |
|
|
| T |
18653686 |
gtt |
18653684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 450
Target Start/End: Complemental strand, 18729894 - 18729702
Alignment:
| Q |
258 |
tgttaaaagggaactagtaaaattgaaatgatatatatgaat-ctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgaca |
356 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||||| |||| ||| ||||| || |||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
18729894 |
tgttaaaagggaacaagtaaaattgagatgatatatctgaattctcc-ctcaatggatctggtaatagactggaatggaaaggctttcaagaagatgaca |
18729796 |
T |
|
| Q |
357 |
aaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtt |
450 |
Q |
| |
|
|| || ||||||||||| ||| |||||| | ||||||||| | || |||||||||||| ||||||||||| |||||||||| ||| ||||||| |
|
|
| T |
18729795 |
aatctcaaaacacttattattaaaaatgtctatttttctaaagatcccaagtatcttccaagcagtttgagagtattgaaattgaatggatgtt |
18729702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 258 - 438
Target Start/End: Complemental strand, 18722472 - 18722292
Alignment:
| Q |
258 |
tgttaaaagggaactagtaaaattgaaatgatatatatgaatctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgacaa |
357 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||||| | ||| | ||| |||| |||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
18722472 |
tgttaaaagggaacaagtaaaattgagatgatatatctgaattctcgctcaacggatcccgtaatagactggaatggaaaggccttcaagaagatgacaa |
18722373 |
T |
|
| Q |
358 |
aactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaat |
438 |
Q |
| |
|
| || ||||||||||| ||| |||||| | |||||||| | || |||||||||||| ||||||||||| |||||||||| |
|
|
| T |
18722372 |
atctcaaaacacttattattaaaaatgtctctttttctaaagatcccaagtatcttccaagcagtttgagagtattgaaat |
18722292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 450
Target Start/End: Complemental strand, 18688012 - 18687820
Alignment:
| Q |
258 |
tgttaaaagggaactagtaaaattgaaatgatatatatgaat-ctccactccatggaatccgtgatagacaagaaaggaaaggccttcaagaagatgaca |
356 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| ||||| |||| ||| ||||| || |||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
18688012 |
tgttaaaagggaacaagtaaaattgagatgatatatctgaattctcc-ctcaatggatctggtaatagactggaatggaaaggctttcaagaagatgaca |
18687914 |
T |
|
| Q |
357 |
aaactgaaaacacttatcattgaaaatggccatttttctagtggtctcaagtatcttccgagcagtttgagtgtattgaaatggaaaggatgtt |
450 |
Q |
| |
|
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| T |
18687913 |
aatctcaaaacacttattattaaaaatgtctcttttactaaagatcccaagtatcttccaagcagtttgagagtattgaaattgaatggatgtt |
18687820 |
T |
|
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