View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15023_high_5 (Length: 459)
Name: NF15023_high_5
Description: NF15023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15023_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 431; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 6917491 - 6917933
Alignment:
| Q |
1 |
tagcataggcaatgtcgcggctcttctataagtttgttcattcttgtttgaaactctccaaacacgaattcttccatcttgatggccggtgagaatcttc |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6917491 |
tagcgtaggcaatgtcgcggctcttctataagtttgttcattcttgtttgaaactctccaaacacgaattcttccatcttgatggccggtgagaatcttc |
6917590 |
T |
|
| Q |
101 |
tcaccggctataacaattgctttaactaaaccactatttgatttaaaaccagcgaattccttttgattcttccaaacacgaatgtttttactatcagaac |
200 |
Q |
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| T |
6917591 |
tcaccggctataacaattgctttaactaaaccactatttgatttaaaacccgcgaattccttttgattcttccaaacacgaatgtttttactatcagaac |
6917690 |
T |
|
| Q |
201 |
cggtgtataataaatctttcgtcgctgcaagcgagtaaatatgaccttcttcgcgaactaatgaaccaacaagagcttcttcgctagacgaagcttcttc |
300 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6917691 |
cggtgtataataaatccttcgtcgctgcaagcgagtaaatatgaccttcttcgcgaactaatgaaccaacaagagcttcttcgctagacgaagcttcttc |
6917790 |
T |
|
| Q |
301 |
attaacatgccatggtgattttgataatggtgaaagagatgcatcataaggtgaattatctgatgccatttgaggatctaaatggggtgcatcagttgtt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6917791 |
attaacatgccatggtgattttgataatggtgaaagagatgcatcataaggtgaattatctgatgccatttgaggatctaaatggggtgcatcagttgtt |
6917890 |
T |
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| Q |
401 |
ttgatagggctgttttttcgaggatggttgtcggagttgtaac |
443 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6917891 |
ttgatagggctgttttttcgaggatggttgtcggagttgtaac |
6917933 |
T |
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