View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15023_low_22 (Length: 275)
Name: NF15023_low_22
Description: NF15023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15023_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 2250979 - 2250716
Alignment:
| Q |
1 |
ataaaacaattttaacttctccccaatgttcatctgcgtgaaaggagttaacaccatcagagaaaaaacaacagatagaaaaaataagggagatagacaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2250979 |
ataaaacaattttaacttctccccaatgttcatctgcgtgaaaggagttaacaccatcagagaaaaaacaacagatagaaaaaataagggagatagacaa |
2250880 |
T |
|
| Q |
101 |
ataagtctgatattaatgtaagttcttctttgcatatacttcttgcatactaatttacttaataaatcttgaattatttttggtactatcagccttttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
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| T |
2250879 |
ataagtctgatattaatgtaagttcttctttgcatatacttcttgcatactaatttacttaataaatcttgaattatttttggtaccatcaaccttttgc |
2250780 |
T |
|
| Q |
201 |
taattcctggattcacgtttctttgcatcaaaatcatcctttttgctaattctaaaccgttcat |
264 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2250779 |
taattccgggattcacgtttctttgcatcaaaatcatcctttttgctaattctaaaccgttcat |
2250716 |
T |
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