View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15023_low_33 (Length: 205)
Name: NF15023_low_33
Description: NF15023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15023_low_33 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 205
Target Start/End: Complemental strand, 28122533 - 28122342
Alignment:
| Q |
14 |
gaagagccaatttgtctatgagtaaggtcacatgccactgattgaatcccagaagtggttgatgttggggcatgatgatgagcagctaagtattgacgtg |
113 |
Q |
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| T |
28122533 |
gaagagccaatttgtctatgagtaaggtcacatgccactgattgaatcccagcagtggttgatgttggggcatgatgatgagcagctaagtattgacgtg |
28122434 |
T |
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| Q |
114 |
gatcaatactggacctctgttgttgcatggagaatgaaggttgtcccattgagtcgaaaagtgtagacatatcataggtgaccggcatggtt |
205 |
Q |
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| T |
28122433 |
gatcaatactggacctctgttgttgcatggagaatgaaggttgtcccattgagtcgaaaagtgtagacatatcataggtgaccggcatggtt |
28122342 |
T |
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