View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15024_high_12 (Length: 487)
Name: NF15024_high_12
Description: NF15024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15024_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 451; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 1 - 471
Target Start/End: Original strand, 25872791 - 25873261
Alignment:
| Q |
1 |
tgcagaatcataggtggttcctccttatcaactaccttcaacccttgaagctccatcataaactgtgacaccaacaccttttcatcctcatctttcacaa |
100 |
Q |
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||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
25872791 |
tgcagtatcttaggtggttcctccttatcaactaccttcaatccttgaagctccatcataaactgtgacactaacaccttttcatcctcatctttcacaa |
25872890 |
T |
|
| Q |
101 |
tagttatcttaggatcatcctcccaatgagccaatcgcggcgtcccaacaatagtaacatgagaccacaaagtcaacccacaaggaatcatcataatccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25872891 |
tagttatcttaggatcatcctcccaatgagccaatcgcggcgtcccaacaatagtaacatgagaccacaaagtcaacccacaaggaatcatcataatccc |
25872990 |
T |
|
| Q |
201 |
attctggttccttaattcagacccagataccgaaatcgaatgccgacacgaatcagaaatattctcagcaacattcacagtttcaacactctgaaactga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25872991 |
attctggttccttaattcagacccagataccgaaatcgaatgccgacacgaatcagaaatattctcagcaacattcacagtttcaacactctgaaactga |
25873090 |
T |
|
| Q |
301 |
atttcttcccacattttcttccctttaacccaagcaaccgtaacagccttttgaatctcagaaaatttgtctttttctaaaccagattcattcaaatcac |
400 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25873091 |
atttcttcccacattttcttccctttaacccaagcaaccttaacagccttttgaatctcagaaaatttgtctttttctaaaccagattcattcaaatcac |
25873190 |
T |
|
| Q |
401 |
cttcattgaaactcaaggtggaaactttttgcaactcttgcattggttttctatgtaatgaaccttggtaa |
471 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
25873191 |
cttcattgaaactcaaggtggaaactttttgcaactcttgcattggttttctatgtaatgaaccttggtaa |
25873261 |
T |
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