View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15024_high_18 (Length: 423)

Name: NF15024_high_18
Description: NF15024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15024_high_18
NF15024_high_18
[»] chr7 (40 HSPs)
chr7 (16-170)||(41989561-41989717)
chr7 (320-414)||(41989834-41989928)
chr7 (78-168)||(38956501-38956591)
chr7 (83-155)||(43942743-43942815)
chr7 (83-170)||(24614204-24614291)
chr7 (83-170)||(25192805-25192892)
chr7 (83-170)||(44895460-44895547)
chr7 (84-170)||(32529745-32529831)
chr7 (83-170)||(3937011-3937098)
chr7 (83-169)||(46022155-46022241)
chr7 (83-170)||(48062153-48062240)
chr7 (83-169)||(7701641-7701727)
chr7 (83-169)||(41189429-41189517)
chr7 (82-170)||(22918056-22918144)
chr7 (80-168)||(46578020-46578108)
chr7 (83-170)||(40112842-40112929)
chr7 (83-170)||(43025436-43025523)
chr7 (82-170)||(45851094-45851179)
chr7 (81-170)||(40417870-40417959)
chr7 (83-168)||(31445416-31445501)
chr7 (83-168)||(35072250-35072335)
chr7 (86-166)||(35207601-35207679)
chr7 (81-170)||(44189197-44189285)
chr7 (86-170)||(42552994-42553078)
chr7 (79-167)||(43159459-43159547)
chr7 (83-152)||(3614334-3614403)
chr7 (83-168)||(35098591-35098676)
chr7 (122-170)||(38073316-38073364)
chr7 (80-163)||(13401548-13401631)
chr7 (83-170)||(35627908-35627995)
chr7 (73-163)||(35600775-35600865)
chr7 (80-148)||(5174435-5174503)
chr7 (83-150)||(38347660-38347728)
chr7 (122-170)||(38861192-38861240)
chr7 (84-168)||(47391214-47391298)
chr7 (83-170)||(17002433-17002519)
chr7 (83-114)||(38073360-38073391)
chr7 (83-170)||(41018760-41018847)
chr7 (84-150)||(38944913-38944979)
chr7 (116-168)||(22925205-22925257)
[»] chr1 (65 HSPs)
chr1 (80-168)||(50726133-50726221)
chr1 (81-170)||(26469455-26469544)
chr1 (73-168)||(35369798-35369893)
chr1 (83-170)||(649865-649952)
chr1 (83-170)||(27464945-27465032)
chr1 (83-170)||(31088277-31088364)
chr1 (86-168)||(45333809-45333891)
chr1 (83-168)||(33100906-33100991)
chr1 (83-169)||(44914459-44914546)
chr1 (83-170)||(45121369-45121455)
chr1 (81-170)||(8350085-8350173)
chr1 (77-170)||(19055641-19055734)
chr1 (79-168)||(37685427-37685516)
chr1 (79-168)||(37700002-37700091)
chr1 (75-170)||(3851254-3851347)
chr1 (83-170)||(21401494-21401581)
chr1 (83-170)||(23645507-23645594)
chr1 (83-170)||(37274921-37275008)
chr1 (89-168)||(50932402-50932481)
chr1 (83-168)||(2571733-2571819)
chr1 (82-170)||(3981913-3982001)
chr1 (83-158)||(30735181-30735256)
chr1 (81-156)||(44519037-44519112)
chr1 (83-170)||(48470735-48470822)
chr1 (82-168)||(37619642-37619728)
chr1 (80-158)||(15469942-15470019)
chr1 (83-169)||(46907292-46907378)
chr1 (76-169)||(18512224-18512317)
chr1 (82-170)||(51571233-51571321)
chr1 (83-170)||(52576189-52576277)
chr1 (86-169)||(43775303-43775386)
chr1 (78-148)||(45640419-45640489)
chr1 (75-170)||(31827047-31827143)
chr1 (83-170)||(9566848-9566935)
chr1 (87-170)||(40861154-40861237)
chr1 (83-168)||(18434893-18434978)
chr1 (81-170)||(19947630-19947719)
chr1 (84-148)||(30570642-30570706)
chr1 (83-168)||(51718518-51718599)
chr1 (76-118)||(6693293-6693335)
chr1 (84-170)||(49065253-49065339)
chr1 (82-167)||(26207940-26208025)
chr1 (83-170)||(8828012-8828096)
chr1 (126-169)||(3159473-3159516)
chr1 (89-152)||(6809694-6809757)
chr1 (83-170)||(15082939-15083025)
chr1 (125-168)||(27533414-27533457)
chr1 (82-156)||(48103249-48103324)
chr1 (83-170)||(50149042-50149129)
chr1 (86-137)||(50333337-50333388)
chr1 (83-170)||(50775044-50775131)
chr1 (124-170)||(29359733-29359779)
chr1 (83-149)||(30467421-30467487)
chr1 (76-114)||(41677217-41677255)
chr1 (122-170)||(12657318-12657367)
chr1 (129-169)||(24981501-24981541)
chr1 (83-170)||(2269460-2269547)
chr1 (83-169)||(25672439-25672525)
chr1 (73-163)||(43560308-43560398)
chr1 (83-168)||(44517849-44517934)
chr1 (91-168)||(51137547-51137624)
chr1 (80-168)||(4466793-4466880)
chr1 (89-165)||(26020970-26021046)
chr1 (87-163)||(39712482-39712558)
chr1 (122-170)||(41677251-41677299)
[»] chr5 (39 HSPs)
chr5 (83-170)||(36739044-36739131)
chr5 (81-170)||(7287075-7287164)
chr5 (83-168)||(33037618-33037703)
chr5 (81-170)||(41321351-41321440)
chr5 (82-166)||(28306019-28306103)
chr5 (83-170)||(14051203-14051290)
chr5 (83-170)||(18258681-18258768)
chr5 (83-170)||(1671638-1671725)
chr5 (83-170)||(26791132-26791219)
chr5 (78-170)||(28467336-28467428)
chr5 (83-168)||(5168281-5168366)
chr5 (84-170)||(1764320-1764406)
chr5 (80-170)||(14923169-14923259)
chr5 (83-169)||(17626083-17626169)
chr5 (83-170)||(8686987-8687074)
chr5 (84-170)||(13168618-13168704)
chr5 (83-168)||(7552855-7552940)
chr5 (82-162)||(15479573-15479653)
chr5 (83-170)||(1274454-1274540)
chr5 (91-170)||(7076464-7076543)
chr5 (79-168)||(2972422-2972511)
chr5 (86-170)||(13309979-13310063)
chr5 (83-170)||(35634723-35634811)
chr5 (83-156)||(3565194-3565267)
chr5 (83-170)||(22972213-22972300)
chr5 (83-170)||(39591776-39591863)
chr5 (83-170)||(39592168-39592255)
chr5 (122-170)||(35646479-35646527)
chr5 (81-167)||(33599061-33599147)
chr5 (85-152)||(39054701-39054768)
chr5 (84-166)||(42175021-42175101)
chr5 (83-150)||(42475560-42475627)
chr5 (83-170)||(19844198-19844285)
chr5 (83-170)||(25560906-25560992)
chr5 (91-150)||(27488003-27488062)
chr5 (122-167)||(1079879-1079924)
chr5 (82-150)||(21156104-21156172)
chr5 (83-170)||(33958147-33958234)
chr5 (134-170)||(39807652-39807688)
[»] chr3 (62 HSPs)
chr3 (83-170)||(42356972-42357059)
chr3 (83-170)||(32924169-32924256)
chr3 (83-170)||(46624003-46624090)
chr3 (76-170)||(36670895-36670989)
chr3 (83-168)||(41309215-41309300)
chr3 (83-170)||(27541390-27541477)
chr3 (83-170)||(52254026-52254113)
chr3 (81-170)||(19149086-19149175)
chr3 (83-170)||(52939747-52939834)
chr3 (80-170)||(5244325-5244415)
chr3 (83-168)||(5114176-5114261)
chr3 (79-160)||(13735836-13735917)
chr3 (81-168)||(16969452-16969539)
chr3 (83-170)||(33939334-33939421)
chr3 (83-170)||(38926724-38926811)
chr3 (84-170)||(35597258-35597344)
chr3 (78-168)||(44856051-44856141)
chr3 (83-169)||(47472426-47472512)
chr3 (82-167)||(7934073-7934158)
chr3 (81-168)||(37503633-37503720)
chr3 (83-169)||(21217609-21217695)
chr3 (83-169)||(37056945-37057031)
chr3 (86-168)||(42358529-42358611)
chr3 (84-169)||(23592555-23592640)
chr3 (83-170)||(13348022-13348109)
chr3 (83-170)||(44413283-44413370)
chr3 (83-168)||(35376969-35377054)
chr3 (83-168)||(44383287-44383372)
chr3 (82-170)||(288822-288910)
chr3 (83-170)||(26014908-26014995)
chr3 (83-170)||(37302642-37302729)
chr3 (83-170)||(44813232-44813319)
chr3 (83-156)||(31157565-31157638)
chr3 (83-156)||(52326129-52326202)
chr3 (86-170)||(8847206-8847289)
chr3 (84-168)||(24256660-24256744)
chr3 (83-170)||(55151605-55151692)
chr3 (106-168)||(20547901-20547963)
chr3 (83-169)||(51982196-51982282)
chr3 (75-148)||(7668068-7668141)
chr3 (84-156)||(23600703-23600775)
chr3 (84-152)||(28539629-28539697)
chr3 (122-170)||(41505587-41505635)
chr3 (78-153)||(44445407-44445482)
chr3 (83-170)||(49780628-49780715)
chr3 (83-169)||(25641471-25641557)
chr3 (87-170)||(11630642-11630725)
chr3 (83-170)||(14226593-14226680)
chr3 (84-170)||(35201323-35201409)
chr3 (83-169)||(42478056-42478142)
chr3 (76-170)||(42889081-42889175)
chr3 (84-149)||(50559101-50559166)
chr3 (83-155)||(39630505-39630577)
chr3 (122-170)||(44413849-44413897)
chr3 (126-170)||(49087038-49087082)
chr3 (124-167)||(33791699-33791742)
chr3 (85-168)||(44463455-44463538)
chr3 (119-170)||(45711363-45711414)
chr3 (129-170)||(45000159-45000200)
chr3 (122-167)||(50318316-50318361)
chr3 (82-114)||(41505631-41505663)
chr3 (87-132)||(45693879-45693924)
[»] chr8 (36 HSPs)
chr8 (82-170)||(42768300-42768388)
chr8 (86-168)||(32501087-32501169)
chr8 (82-170)||(22719536-22719624)
chr8 (83-170)||(34186703-34186790)
chr8 (89-167)||(36251425-36251503)
chr8 (73-170)||(37449303-37449400)
chr8 (89-169)||(5277393-5277473)
chr8 (83-170)||(12898817-12898904)
chr8 (83-170)||(27325854-27325941)
chr8 (83-170)||(29025356-29025443)
chr8 (84-170)||(36660339-36660425)
chr8 (81-170)||(4054172-4054261)
chr8 (83-170)||(11253430-11253517)
chr8 (87-170)||(43397877-43397960)
chr8 (81-170)||(7271946-7272035)
chr8 (83-166)||(24479323-24479406)
chr8 (83-170)||(34639629-34639716)
chr8 (83-168)||(37133750-37133835)
chr8 (84-164)||(32133425-32133505)
chr8 (86-168)||(36816507-36816589)
chr8 (83-150)||(10839370-10839437)
chr8 (83-168)||(13106578-13106663)
chr8 (82-170)||(7598805-7598892)
chr8 (82-170)||(23754593-23754681)
chr8 (122-170)||(31249451-31249499)
chr8 (83-145)||(10692552-10692614)
chr8 (73-167)||(32752503-32752597)
chr8 (82-170)||(5740672-5740760)
chr8 (81-168)||(12734897-12734984)
chr8 (122-168)||(10731644-10731690)
chr8 (78-167)||(21526162-21526252)
chr8 (89-150)||(144150-144211)
chr8 (83-148)||(36969562-36969627)
chr8 (124-168)||(2883286-2883330)
chr8 (124-168)||(3151236-3151280)
chr8 (82-170)||(36514451-36514539)
[»] chr6 (32 HSPs)
chr6 (83-170)||(32316816-32316903)
chr6 (82-170)||(552889-552977)
chr6 (83-170)||(33430250-33430337)
chr6 (83-170)||(15974704-15974791)
chr6 (88-170)||(18737460-18737542)
chr6 (81-170)||(31077890-31077979)
chr6 (83-170)||(26595445-26595532)
chr6 (83-169)||(16199547-16199633)
chr6 (83-168)||(13689882-13689967)
chr6 (81-170)||(14818028-14818117)
chr6 (83-170)||(1156816-1156903)
chr6 (83-170)||(34047483-34047570)
chr6 (84-156)||(11612298-11612370)
chr6 (81-168)||(22079449-22079536)
chr6 (82-168)||(5694038-5694124)
chr6 (83-168)||(277089-277174)
chr6 (83-168)||(4820465-4820550)
chr6 (81-169)||(5080465-5080541)
chr6 (83-170)||(30457601-30457688)
chr6 (112-170)||(2241942-2242000)
chr6 (95-168)||(11014890-11014963)
chr6 (81-170)||(17551265-17551353)
chr6 (77-169)||(21968776-21968866)
chr6 (86-167)||(30423443-30423524)
chr6 (83-168)||(33603168-33603253)
chr6 (122-170)||(8098524-8098572)
chr6 (94-168)||(3853206-3853280)
chr6 (83-168)||(31883191-31883276)
chr6 (86-165)||(3552046-3552125)
chr6 (87-149)||(10826620-10826682)
chr6 (88-149)||(33657006-33657067)
chr6 (84-140)||(32442537-32442593)
[»] chr4 (67 HSPs)
chr4 (83-170)||(26732321-26732408)
chr4 (78-170)||(43175080-43175172)
chr4 (83-170)||(26724860-26724947)
chr4 (81-168)||(38376376-38376463)
chr4 (83-170)||(51986138-51986225)
chr4 (82-169)||(53801646-53801733)
chr4 (83-170)||(23369220-23369307)
chr4 (83-170)||(44539830-44539917)
chr4 (87-168)||(37997352-37997433)
chr4 (86-170)||(10250406-10250490)
chr4 (83-170)||(26492103-26492190)
chr4 (83-170)||(29175321-29175408)
chr4 (83-170)||(37297145-37297231)
chr4 (79-170)||(46213066-46213157)
chr4 (83-168)||(31641453-31641538)
chr4 (83-168)||(39440582-39440667)
chr4 (87-170)||(27050978-27051061)
chr4 (86-168)||(11068786-11068868)
chr4 (83-169)||(38382418-38382504)
chr4 (83-169)||(47181938-47182024)
chr4 (83-169)||(48402085-48402171)
chr4 (83-168)||(39478535-39478620)
chr4 (86-170)||(24575742-24575826)
chr4 (83-170)||(27965083-27965168)
chr4 (83-170)||(36178002-36178089)
chr4 (83-170)||(42853673-42853760)
chr4 (83-169)||(15175643-15175729)
chr4 (83-167)||(56363933-56364017)
chr4 (91-170)||(38134449-38134528)
chr4 (82-168)||(26907969-26908055)
chr4 (83-169)||(34616658-34616744)
chr4 (83-170)||(5622554-5622641)
chr4 (75-170)||(19473836-19473931)
chr4 (84-170)||(56474656-56474742)
chr4 (83-168)||(39654922-39655007)
chr4 (122-170)||(29531533-29531581)
chr4 (83-170)||(2575678-2575765)
chr4 (83-170)||(40348890-40348972)
chr4 (89-152)||(45083086-45083149)
chr4 (122-168)||(46634198-46634244)
chr4 (83-168)||(50831643-50831728)
chr4 (122-170)||(2268434-2268482)
chr4 (81-155)||(38510659-38510731)
chr4 (83-170)||(42491170-42491257)
chr4 (83-170)||(50721632-50721719)
chr4 (83-149)||(19232022-19232088)
chr4 (86-169)||(31995804-31995889)
chr4 (83-153)||(39195170-39195240)
chr4 (121-170)||(1627484-1627533)
chr4 (88-165)||(39447848-39447924)
chr4 (82-146)||(5233557-5233621)
chr4 (87-163)||(24509279-24509355)
chr4 (82-114)||(46634240-46634272)
chr4 (81-149)||(47288200-47288268)
chr4 (82-114)||(53786102-53786134)
chr4 (82-153)||(7632348-7632419)
chr4 (81-152)||(39606086-39606157)
chr4 (122-157)||(42360265-42360300)
chr4 (82-168)||(31090590-31090676)
chr4 (86-156)||(42395928-42395998)
chr4 (122-168)||(50608551-50608597)
chr4 (83-168)||(35897799-35897883)
chr4 (125-170)||(49449093-49449138)
chr4 (81-168)||(20760354-20760441)
chr4 (81-168)||(20766745-20766832)
chr4 (83-139)||(39259080-39259136)
chr4 (82-114)||(42360296-42360328)
[»] chr2 (47 HSPs)
chr2 (83-170)||(43487475-43487562)
chr2 (84-170)||(9207686-9207772)
chr2 (83-170)||(9647228-9647315)
chr2 (83-170)||(18254097-18254184)
chr2 (83-168)||(2076667-2076752)
chr2 (83-170)||(22888705-22888792)
chr2 (86-170)||(6049236-6049320)
chr2 (83-170)||(1248782-1248869)
chr2 (83-170)||(9194337-9194424)
chr2 (83-170)||(9990787-9990874)
chr2 (83-170)||(41195680-41195767)
chr2 (86-170)||(42091393-42091479)
chr2 (83-166)||(42421786-42421869)
chr2 (83-168)||(37737859-37737944)
chr2 (84-169)||(41056636-41056721)
chr2 (83-167)||(9760117-9760201)
chr2 (83-170)||(41042350-41042437)
chr2 (83-169)||(25270470-25270556)
chr2 (83-156)||(32477442-32477515)
chr2 (83-170)||(19633378-19633466)
chr2 (83-170)||(19830279-19830367)
chr2 (83-169)||(3097749-3097835)
chr2 (82-168)||(3838767-3838853)
chr2 (83-169)||(13333058-13333144)
chr2 (83-144)||(21611543-21611604)
chr2 (84-168)||(34944979-34945063)
chr2 (82-168)||(7698269-7698355)
chr2 (83-152)||(8848585-8848654)
chr2 (83-168)||(27490618-27490703)
chr2 (122-170)||(22416309-22416357)
chr2 (83-170)||(7663955-7664041)
chr2 (84-170)||(28494956-28495042)
chr2 (87-168)||(19642696-19642777)
chr2 (122-170)||(6511347-6511395)
chr2 (122-170)||(17388530-17388578)
chr2 (84-150)||(29349622-29349688)
chr2 (83-152)||(18846725-18846794)
chr2 (95-168)||(19108993-19109066)
chr2 (82-170)||(14255399-14255487)
chr2 (81-149)||(32701207-32701275)
chr2 (113-169)||(33273505-33273561)
chr2 (122-170)||(44287369-44287417)
chr2 (83-114)||(22416353-22416384)
chr2 (81-168)||(39147864-39147951)
chr2 (83-170)||(44977387-44977474)
chr2 (119-168)||(7502334-7502383)
chr2 (81-170)||(31415006-31415095)
[»] scaffold0199 (1 HSPs)
scaffold0199 (76-170)||(8764-8858)
[»] scaffold0098 (1 HSPs)
scaffold0098 (81-170)||(49391-49480)
[»] scaffold0056 (1 HSPs)
scaffold0056 (83-170)||(76507-76594)
[»] scaffold0519 (1 HSPs)
scaffold0519 (83-170)||(11878-11965)
[»] scaffold0087 (1 HSPs)
scaffold0087 (80-169)||(53246-53335)
[»] scaffold0067 (1 HSPs)
scaffold0067 (122-170)||(35619-35667)
[»] scaffold0148 (1 HSPs)
scaffold0148 (83-150)||(20789-20856)
[»] scaffold0041 (1 HSPs)
scaffold0041 (122-168)||(10890-10936)
[»] scaffold0184 (1 HSPs)
scaffold0184 (83-169)||(16677-16762)
[»] scaffold0078 (1 HSPs)
scaffold0078 (83-169)||(56082-56167)


Alignment Details
Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 41989561 - 41989717
Alignment:
Q  16 cataagcgtcagcaaatcgaagcctataataatcattacagagcgctatacccaaacattaaaaaatgagttgtgttatttgaacatccatatatgtgat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41989561 cataagcgtcagcaaatcgaagcctataataatcattacagagcgctatacccaaacattaaaaaatgagttgtgttatttgaacatccatatatgtgat 41989660  T
Q  116 aatttttgtgacaaccaaaattttac--aaagaaaatgaggtagtgacacaaaaacc 170  Q
    || |||||||||||||||||||||||  ||| |||||||||||||| ||||||||||    
T  41989661 aacttttgtgacaaccaaaattttacaaaaaaaaaatgaggtagtggcacaaaaacc 41989717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 320 - 414
Target Start/End: Original strand, 41989834 - 41989928
Alignment:
Q  320 atcaaccacacccatatctatcaatcgacaagcgctaattctctcaacaaatttattacatcttctattacacgcaactacacctccattctttt 414  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41989834 atcaaccacacccatatctatcaatcgacacgcgctaattctttcaacaaatttattacatcttctattacacgcaactacacctccattctttt 41989928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 38956501 - 38956591
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  38956501 aaaatgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaa 38956591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 43942815 - 43942743
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43942815 gagttgtgttatttgaacatccatatatgtgataatttttgtggcaaccaaaattttacaaagaaaatgaggt 43942743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 24614204 - 24614291
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  24614204 gagttgtgttatttgaacattcatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaacc 24614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 25192805 - 25192892
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| || |||| |||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25192805 gagttgtgttatttgaatattcatacatgtgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtgacacaaaaacc 25192892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 44895460 - 44895547
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  44895460 gagttatgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 44895547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 32529745 - 32529831
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||| | |||||||    
T  32529745 agttgtgttatttgagcatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaggtagtgataaaaaaacc 32529831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 3937011 - 3937098
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||| |||||||||| || ||||||||||    
T  3937011 gagttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaacc 3937098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 46022155 - 46022241
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  46022155 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 46022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 48062240 - 48062153
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||| | |  ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||    
T  48062240 gagttgtgttatttgaacatccgtttgagtgataatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaacc 48062153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 7701727 - 7701641
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||| ||||| ||||||||||||||| ||||||||||||    
T  7701727 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaagttttataaagaaaatgaggtattgacacaaaaac 7701641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 41189429 - 41189517
Alignment:
Q  83 gagttgtgttatttgaacatccatat--atgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||| |||||  ||||||||| |||| |||||| ||||||||||||||| |||||||||| ||||||||||||    
T  41189429 gagttgtgttatttgaacattcatatatatgtgataacttttatgacaatcaaaattttacaaaggaaatgaggtattgacacaaaaac 41189517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 22918056 - 22918144
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| |||||||| |||||||| |||||| || ||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  22918056 tgagttgtattatttgagcatccatacatgtgacaacttttgcgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaacc 22918144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 46578020 - 46578108
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||| |||  ||| |||||| || ||||||||    
T  46578020 aatgagttgtcttatttgaacatccatatatgtgataatttctatgacaaccaaaattttataaaagaaacgaggtattggcacaaaaa 46578108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 40112842 - 40112929
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||| | || || | |||||| ||||||||||||||| |||| |||||||| ||||||||||    
T  40112842 gagttgtgttatttgaacatccatatatgtaacaacttctctgacaatcaaaattttacaaaggaaataaggtagtggcacaaaaacc 40112929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 43025523 - 43025436
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||| ||||||| |||||||||| || |||||| ||||| |||||||||||||| ||||||| ||||| ||||||||||    
T  43025523 gagttgtgttattcgaacatctatatatgtgacaacttttgtaacaactaaaattttacaaaggaaatgagatagtggcacaaaaacc 43025436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 45851094 - 45851179
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||| ||| | ||||||| ||||||| |||||||||||||| ||||||   |||||||||||||||    
T  45851094 tgagttgtgttatttgaacatccatatctgtcacaatttttttgacaactaaaattttacaaaggaaatga---agtgacacaaaaacc 45851179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 40417959 - 40417870
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||| || |||  || || ||||| |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  40417959 atgagttgtgttatttgaacatctatttatacgacaacttttgagacaaccaaaattttacaaagaaagtgaggtattgacataaaaacc 40417870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 31445501 - 31445416
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||  | ||| ||||||||||||  |||| |||||||||||||||||||||||  | |||||||||||    
T  31445501 gagttgtgttatttgaacatcattttatatgataatttttgcaacaatcaaaattttacaaagaaaatgagtgattgacacaaaaa 31445416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 35072250 - 35072335
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||| ||||||||||| ||| ||| || |||||  ||||||||||||||| ||||||||||||  | |||||||||||    
T  35072250 gagttgtgttatctgaacatccatttatatgacaacttttgaaacaaccaaaattttataaagaaaatgagacattgacacaaaaa 35072335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 35207679 - 35207601
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaa 166  Q
    ||||||||||||||||||||| |||  ||||||||  | |||||||||||||||||||| ||||||| ||| |||||||||    
T  35207679 ttgtgttatttgaacatccatttataggataattt--gagacaaccaaaattttacaaataaaatgaagtattgacacaaa 35207601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 44189197 - 44189285
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||| ||||||||||| | ||| ||| |||||||||| ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||    
T  44189197 atgacttgtgttatttca-cattcatgtatgtgataacttttgtgacaatcaaaaattttcaaaggaaatgagttagtgacacaaaaacc 44189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 42553078 - 42552994
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||| |||| ||  |||||| ||||| || ||||| |||||||||||||||| |||||| || ||||||||||    
T  42553078 ttgtgttatttgaacaaccatttaattgataacttttgagaaaaccataattttacaaagaaaaagaggtattggcacaaaaacc 42552994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 43159459 - 43159547
Alignment:
Q  79 aaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||||||||||||||||| |||| || |||| || |||  ||||||||| || ||||||||||||| |||||| ||| ||||||    
T  43159459 aaatgagttgtgttatttgaacaaccatttaggtgacaactttgatgacaaccataaatttacaaagaaaaagaggtattgatacaaaa 43159547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 3614334 - 3614403
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    ||||| |||||||||||||||||| ||| ||| || |||||  ||||||||||||||||||||| |||||    
T  3614334 gagttatgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagacaatga 3614403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 35098591 - 35098676
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||| |||||| ||| ||| || |||||  ||||||||||||||| | ||||||||||  | |||||||||||    
T  35098591 gagttgtgttatttgaatatccatttatatgacaacttttgaaacaaccaaaattttatatagaaaatgagacattgacacaaaaa 35098676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 38073364 - 38073316
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||||    
T  38073364 tgtgacaaccaaaattttacaaaggaaatgaggtattggcacaaaaacc 38073316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 13401548 - 13401631
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacac 163  Q
    |||||| ||||||||||||||| |||| || |||| |||||||||||||||||  | ||||||||| |||  || |||||||||    
T  13401548 aatgaggtgtgttatttgaacaaccatttaagtgacaatttttgtgacaaccactaatttacaaaggaaaatagatagtgacac 13401631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 35627908 - 35627995
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| | || |   |||||| ||||| || ||||| ||||||| |||||||| |||||| |||||||||||||    
T  35627908 gagttgtgttatttgaacaactatctgattgataacttttgagataaccataattttataaagaaaaagaggtattgacacaaaaacc 35627995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 35600865 - 35600775
Alignment:
Q  73 attaaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacac 163  Q
    |||||| |||||| ||||||||||||||| |||| |  |||| || ||||||||||||||  | |||||||||||||  || |||||||||    
T  35600865 attaaataatgaggtgtgttatttgaacaaccatttgagtgacaacttttgtgacaaccactaatttacaaagaaaagtagatagtgacac 35600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 5174435 - 5174503
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaa 148  Q
    |||||||| ||||||||||||||| || ||| ||||||| | | ||||||||| | |||||||||||||    
T  5174435 aatgagttatgttatttgaacatctatttatttgataatctatttgacaaccatatttttacaaagaaa 5174503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 38347728 - 38347660
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataa-tttttgtgacaaccaaaattttacaaagaaaat 150  Q
    |||||||||||||||||||| ||| ||| | |||| |||||| || || ||||||||||||||||||||    
T  38347728 gagttgtgttatttgaacatacatttatctaataattttttgagataatcaaaattttacaaagaaaat 38347660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 38861240 - 38861192
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| ||||||||||||||| |||| |||||||| ||||||||||    
T  38861240 tgtgacaatcaaaattttacaaagtaaataaggtagtggcacaaaaacc 38861192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 47391214 - 47391298
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||| |||||||| ||||||||| |||| ||||  ||||| ||| |||||| |||| ||||||  || |||||||||||    
T  47391214 agttgtgttagttgaacattcatatatgtaataacttttaagacaatcaatattttataaaggaaatgaaatattgacacaaaaa 47391298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 17002519 - 17002433
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||  | ||| ||| ||| ||||  ||||||||| ||||| ||||||||||||  | |||||||||||||    
T  17002519 gagttgtgttatttgaacatcattttatatgacaatctttgcaacaaccaaa-ttttataaagaaaatgagtgattgacacaaaaacc 17002433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 114
Target Start/End: Complemental strand, 38073391 - 38073360
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtga 114  Q
    ||||||||||||||||||||||||||||||||    
T  38073391 gagttgtgttatttgaacatccatatatgtga 38073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 41018847 - 41018760
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| | | || || |||| || |||| |||||| || || ||||||||||||| |||||| | |||||||||||    
T  41018847 gagttgtgttatttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaacc 41018760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 38944979 - 38944913
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    ||||||||||||| ||||| ||| ||| ||| || ||||  ||||| ||||||||||||||||||||    
T  38944979 agttgtgttatttaaacattcatttatatgacaacttttaagacaatcaaaattttacaaagaaaat 38944913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 22925205 - 22925257
Alignment:
Q  116 aatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||  |||||||||||||||||| |||||| || || |||||||||||    
T  22925205 aatttttgaaacaaccaaaattttacaaggaaaataagatattgacacaaaaa 22925257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 50726133 - 50726221
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  50726133 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttgcaaagaaaatgaggtagtggcacaaaaa 50726221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 26469544 - 26469455
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26469544 atgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 26469455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 35369893 - 35369798
Alignment:
Q  73 attaaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  35369893 attaaaaaatgaggtgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaa 35369798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 649952 - 649865
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  649952 gagttgtgttatttgaacatccacatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 649865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 27464945 - 27465032
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27464945 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 27465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 31088364 - 31088277
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  31088364 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggtagtggcacaaaaacc 31088277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 45333891 - 45333809
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  45333891 ttgtgttatttgaacatctatatatgtgataatttttgtgacaattaaaattttacaaaggaaatgaggtagtgacacaaaaa 45333809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 33100991 - 33100906
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  33100991 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaa 33100906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 44914459 - 44914546
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataattttt-gtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||    
T  44914459 gagttgtgttatttgaacatccatatatgtgacaattttttgcgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaac 44914546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 45121369 - 45121455
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  45121369 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatga-gtagtggcacaaaaacc 45121455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 8350085 - 8350173
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  8350085 atgagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaa-tttacaaaggaaataaggtagtgacacaaaaacc 8350173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 77 - 170
Target Start/End: Original strand, 19055641 - 19055734
Alignment:
Q  77 aaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||| || || ||||||||||    
T  19055641 aaaaaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgagatattgtcacaaaaacc 19055734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 37685516 - 37685427
Alignment:
Q  79 aaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  37685516 aaatgagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaa 37685427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 37700002 - 37700091
Alignment:
Q  79 aaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  37700002 aaatgagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaa 37700091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 3851347 - 3851254
Alignment:
Q  75 taaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||  ||||||||||||||||||||||| || |||| ||||||||||||||||| |||| |||||||||||||||| |||||||    
T  3851347 taaaaaatgagttgt--tatttgaacatccatatatgtgacaacttttatgacaaccaaaattttataaaggaaatgaggtagtgacagaaaaacc 3851254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 21401581 - 21401494
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||||||| || |||||  |||| |||||||||||||||||||||||||| |||||||||||||    
T  21401581 gagttgtgttatttgaacatccatttatgtgacaacttttgaaacaatcaaaattttacaaagaaaatgaggtattgacacaaaaacc 21401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 23645594 - 23645507
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||| ||||||||| | || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23645594 gagttatgttatttgaacatacatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 23645507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 37274921 - 37275008
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||| || |||||| || ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  37274921 gagttgtgttatttgaacatccttacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaacc 37275008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 50932481 - 50932402
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  50932481 tgttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattgacacaaaaa 50932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 2571819 - 2571733
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaatttt-acaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||||  || ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2571819 gagttgtgttatttgaacatccatgcatatgacaacttttgtgacaaccaaaattttaacaaagaaaatgaggtagtgacacaaaaa 2571733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 3981913 - 3982001
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||| |||||| ||  |||||||||| ||||||||||||||||||||||| || |||||||| ||||    
T  3981913 tgagttgtgttatttgaacatccataaatgtgacaacatttgtgacaatcaaaattttacaaagaaaatgagatattgacacaataacc 3982001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 30735181 - 30735256
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagt 158  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  30735181 gagttgtgttatttgaatatccatgtatgtgataatttttgtgacaatcaaaattttataaagtaaatgaggtagt 30735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 44519037 - 44519112
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    |||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||| ||||||||||    
T  44519037 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggta 44519112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 48470822 - 48470735
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| || || |||| |||||    
T  48470822 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatattggcacagaaacc 48470735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 37619728 - 37619642
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||||||||||| |||||||||| || ||||||||    
T  37619728 tgagttatgttatttgaacatccatatatgtgacaacttttattacaaccaaaattttacaaaggaaatgaggtattggcacaaaaa 37619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 15469942 - 15470019
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagt 158  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||| |||| ||||||||||||    
T  15469942 aatgagttgtgttatttgaacattcatatatgtgataa-ttttgtgacaattaaaattttataaaggaaatgaggtagt 15470019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 46907378 - 46907292
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| |||  || || ||||| ||||| |||||||||| ||||||||||||||| ||||||||||||    
T  46907378 gagttgtgttatttgaacatccatttatacgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaac 46907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 18512224 - 18512317
Alignment:
Q  76 aaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||| |||||||||||||| |||||| || ||| |||||||||||  |||||| ||||||||| ||||||||||||||| ||||| ||||||    
T  18512224 aaaaaaagagttgtgttatttcaacatcaatttatatgataatttttaagacaactaaaattttataaagaaaatgaggtattgacataaaaac 18512317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 51571233 - 51571321
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| |||| |   ||| |||||||| |||||||| |||||||||||||||| |||||| |||||||||||||    
T  51571233 tgagttgtgttatttgaacaaccatttgattgacaatttttgggacaaccataattttacaaagaaaaagaggtattgacacaaaaacc 51571321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 52576189 - 52576277
Alignment:
Q  83 gagttgtgttatttgaaca-tccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| | |||||| |||| || ||||||||||||||||||||||||||| ||||||||||  | ||||||||||    
T  52576189 gagttgtgttatttgaacaattcatataggtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaccggcacaaaaacc 52576277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 43775386 - 43775303
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||| || ||||||||||| || |||| |||||| ||||||||||||||||||||||| || ||| ||||||||    
T  43775386 ttgtgttatttgaatattcatatatgtgacaacttttatgacaatcaaaattttacaaagaaaatgagatattgatacaaaaac 43775303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 45640489 - 45640419
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaa 148  Q
    |||| ||||||||||||||||||||| |||||||||| || ||||||  ||||||||||||||||||||||    
T  45640489 aaaaagagttgtgttatttgaacatctatatatgtgacaacttttgttgcaaccaaaattttacaaagaaa 45640419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 31827143 - 31827047
Alignment:
Q  75 taaaaaat-gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| ||||||||||||||||||||| || ||  ||| || |||||  ||||||||||||||||||| |||||||| || |||||||||||||    
T  31827143 taaaaaatagagttgtgttatttgaacatctatttagatgacaacttttgatacaaccaaaattttacaaaaaaaatgagttattgacacaaaaacc 31827047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 9566848 - 9566935
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||  ||| ||| || ||||| |||||||||||||||||| |||||||  |||| |||||||||||||    
T  9566848 gagttgtgttatttgaacattcaattatatgacaacttttgagacaaccaaaattttacatagaaaatagggtattgacacaaaaacc 9566935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 40861154 - 40861237
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| |||||||||  || |||||||||||| ||||||||| |||| |||| || ||||| ||||||||||    
T  40861154 tgtgttatttgaacatctatatatgtgtcaacttttgtgacaactaaaattttataaaggaaataagatagtggcacaaaaacc 40861237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 18434978 - 18434893
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||| ||| || ||  ||| || ||||||||||||||||||||| |||||||||||| ||| || ||||||||    
T  18434978 gagttgtgttatttgaaaatctatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaa 18434893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 19947630 - 19947719
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||  || ||| ||| || ||||| |||||||||||||||| |||||||| |||||| ||  |||||||||    
T  19947630 atgagttgtgttatttgaacatttatttatatgacaacttttgagacaaccaaaattttataaagaaaaggaggtattgggacaaaaacc 19947719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 30570706 - 30570642
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaa 148  Q
    ||||||||||||||||||| ||| ||| ||||||||||||  |||| ||||||||||||||||||    
T  30570706 agttgtgttatttgaacattcatttatatgataatttttgaaacaatcaaaattttacaaagaaa 30570642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 51718518 - 51718599
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||||    |||| || |||||||| ||| |||| ||||||||| |||||| |||||||||||||||    
T  51718518 gagttgtgttatttgaacatccat----gtgacaacttttgtgataactaaaactttacaaaggaaatgaagtagtgacacaaaaa 51718599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 6693335 - 6693293
Alignment:
Q  76 aaaaaatgagttgtgttatttgaacatccatatatgtgataat 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  6693335 aaaaaatgagttgtgttatttgaacattcatatatgtgataat 6693293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 49065253 - 49065339
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||| ||| || ||| ||| ||||||   || ||||||||||||||||||||||||| ||| || ||||||||||    
T  49065253 agttgtgttatttgaatatctatttatatgacaattttaaagataaccaaaattttacaaagaaaatgaagtattggcacaaaaacc 49065339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 26208025 - 26207940
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    |||||||||||||||||||||| || ||  | |||| |||||||| || ||||||||| |||||||||||| ||| ||||| ||||    
T  26208025 tgagttgtgttatttgaacatctatttagattataacttttgtgataatcaaaattttgcaaagaaaatgatgtattgacataaaa 26207940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 8828012 - 8828096
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||  ||  |||||| |||||||| |||||||||||||||| |||  |||||||||| || ||||||||||    
T  8828012 gagttgtgttatttgaacat--atc-atgtgacaatttttgcgacaaccaaaattttataaaagaaatgaggtattggcacaaaaacc 8828096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 3159516 - 3159473
Alignment:
Q  126 acaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  3159516 acaaccaaaattttacaaaggaaatgaggtagtggcacaaaaac 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 6809757 - 6809694
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    |||||||||||||||||| ||| ||| || ||||| |||||||||||||||| | |||||||||    
T  6809757 tgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttatatagaaaatga 6809694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 15082939 - 15083025
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||| |||||| ||||||||| | || |||||| |||| |||| |||||||||| |||||| ||| |||||||||||||    
T  15082939 gagttgtattattcgaacattcatatatgtcaaaacttttgt-acaatcaaacttttacaaaggaaatgaagtattgacacaaaaacc 15083025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 27533414 - 27533457
Alignment:
Q  125 gacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  27533414 gacaaccaaaattttacaaagaaaatgaggtattgacataaaaa 27533457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 48103249 - 48103324
Alignment:
Q  82 tgagttgtgttatttgaa-catccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    ||||||||| |||||||| |||| || ||| ||| || ||||| |||||||||||||||||||||||||| |||||    
T  48103249 tgagttgtgatatttgaaacatctatttatatgacaacttttgagacaaccaaaattttacaaagaaaataaggta 48103324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 50149129 - 50149042
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||  | ||| ||| || |||||  |||| ||||||||||||||||||||||   | |||||||||||||    
T  50149129 gagttgtgttatttgaacatcattttatatgacaacttttgcaacaatcaaaattttacaaagaaaatgattgattgacacaaaaacc 50149042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 50333388 - 50333337
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaatt 137  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||    
T  50333388 ttgtgttatttaaccatccatatatgtgacaacttttgtgacaaccaaaatt 50333337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 50775044 - 50775131
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||  |||| |   ||| || |||||||||||||| |||||||||||||||| || ||  |||||||||||||    
T  50775044 gagttgtgttatttgaacgaccatttgattgacaaattttgtgacaaccataattttacaaagaaaaagatgtgttgacacaaaaacc 50775131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 29359779 - 29359733
Alignment:
Q  124 tgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||    
T  29359779 tgacaaccaaaattttacaaagaaaatgatgtaatggcacaaaaacc 29359733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 30467421 - 30467487
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    ||||||||||||||||||||| |  ||| ||| || |||||||||||| ||| ||||||||||||||    
T  30467421 gagttgtgttatttgaacatctaattatatgacaacttttgtgacaactaaagttttacaaagaaaa 30467487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 41677217 - 41677255
Alignment:
Q  76 aaaaaatgagttgtgttatttgaacatccatatatgtga 114  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  41677217 aaaaaaagagttgtgttatttgaacatccatatatgtga 41677255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 12657367 - 12657318
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagt-gacacaaaaacc 170  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  12657367 tgtgacaaccaaaattttataaaggaaatgaggtagtggacacaaaaacc 12657318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 24981501 - 24981541
Alignment:
Q  129 accaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  24981501 accaaaattttataaagaaaatgaggtattgacacaaaaac 24981541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 2269460 - 2269547
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| || ||  ||| ||| || |||||  |||||||||||||||   ||||||| ||||| |||||||||||||    
T  2269460 gagttgtgttatttgaatattcaattatatgacaacttttgatacaaccaaaattttatttagaaaataaggtattgacacaaaaacc 2269547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 25672525 - 25672439
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||| |||| |||||| | || ||| |||||| |||||  | || |||||||||||||||||||| | ||| ||||||||||||    
T  25672525 gagttgtattatctgaacaactatttatatgataacttttgatataatcaaaattttacaaagaaaataaagtattgacacaaaaac 25672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 43560398 - 43560308
Alignment:
Q  73 attaaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacac 163  Q
    ||||| ||||||| |||||||||||||||  ||| |  |||| |||||||||||||||||  | ||||||| |||||  || |||||||||    
T  43560398 attaataaatgaggtgtgttatttgaacaatcatttgagtgacaatttttgtgacaaccactaatttacaaggaaaagtagatagtgacac 43560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 44517849 - 44517934
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||| ||||   |||||||| ||||| || ||| | || |||||||||||||  | ||| |||||||||||    
T  44517849 gagttgtgttatttgaacaaccattcgtgtgataacttttgggataactataaatttacaaagaaaaatatgtattgacacaaaaa 44517934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 51137547 - 51137624
Alignment:
Q  91 ttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| ||  || ||| ||||||| ||||||| || |||||||||||||||| |||||| || ||||| |||||    
T  51137547 ttatttgaatatttatttatatgataatatttgtgataaacaaaattttacaaagagaatgagatattgacataaaaa 51137624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 4466880 - 4466793
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||| |||| |   ||| ||||||||  ||||||| |||||||||||| |||   |||| |||||||||||    
T  4466880 aatgagttgtgttatttgaacaaccat-ttgatgacaatttttggaacaaccataattttacaaaggaaaaatggtattgacacaaaaa 4466793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 26020970 - 26021046
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaa 165  Q
    |||||||||||||| ||| ||| ||| |  ||||| ||||| |||||||||||||| |||| ||| || ||||||||    
T  26020970 tgttatttgaacattcatttatatgacatcttttgagacaatcaaaattttacaaaaaaaaagagatattgacacaa 26021046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 39712558 - 39712482
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacac 163  Q
    ||||||||||||||| |||| |  ||||||| ||||||||||||||  | ||||||||| |||  || |||||||||    
T  39712558 tgtgttatttgaacaaccatttgagtgataacttttgtgacaaccactaatttacaaaggaaagtagatagtgacac 39712482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 41677251 - 41677299
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||| ||||||||| ||| |||||||||||||  ||||||||||    
T  41677251 tgtgacaactaaaattttataaataaaatgaggtagttgcacaaaaacc 41677299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 36739131 - 36739044
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36739131 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaagaaatgaggtagtgacacaaaaacc 36739044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 7287075 - 7287164
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7287075 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 7287164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 33037703 - 33037618
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33037703 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 33037618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 41321440 - 41321351
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  41321440 atgagttgtgttatttgaatatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaacc 41321351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 28306019 - 28306103
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaa 166  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28306019 tgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaa 28306103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 14051203 - 14051290
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14051203 gagttgtgttattcaaacatccatatatgtgataacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaacc 14051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 18258681 - 18258768
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18258681 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 18258768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 1671725 - 1671638
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  1671725 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtactgacacaaaaacc 1671638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 26791132 - 26791219
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  26791132 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaacc 26791219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 28467336 - 28467428
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||| |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  28467336 aaaaagagttgtgttatctgaacattcatatatgtgacaatttttgtgacaaccaaaattttataaaggaaatgaggcagtgacacaaaaacc 28467428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 5168366 - 5168281
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||| ||||||| ||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  5168366 gagttgtgttatttgaacattcatatatatgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtggcacaaaaa 5168281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 1764406 - 1764320
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||| ||||||||||||| || |||||||    
T  1764406 agttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcataaaaacc 1764320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 14923259 - 14923169
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| |||||||||| || ||| |||| |||||||||||||||||  ||||||||||||| ||||||||||    
T  14923259 aatgagttgtgttatttgaacatcgatatatgtgacaactttcgtgaaaaccaaaattttacaaaagaaatgaggtagtggcacaaaaacc 14923169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 17626169 - 17626083
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  17626169 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 17626083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 8687074 - 8686987
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||| ||||||||||||||| ||||||||||| || |||| | |||| |||||||||||||||||||||||||| |||||||||||||    
T  8687074 gagtagtgttatttgaacattcatatatgtgacaacttttataacaatcaaaattttacaaagaaaatgaggtattgacacaaaaacc 8686987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 13168704 - 13168618
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||| ||||| ||||||||||| || ||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||    
T  13168704 agttgtgttatttcaacattcatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatagtggcacaaaaacc 13168618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 7552855 - 7552940
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||| ||  ||| || ||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  7552855 gagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaa 7552940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 15479653 - 15479573
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgaca 162  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||  ||||||||||||| ||||||||||| |||||    
T  15479653 tgagttgtgttatttgaacatccataaatgtgacaacttttgtgacaattaaaattttacaaaaaaaatgaggtattgaca 15479573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 1274540 - 1274454
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || |||| || |||||||||||||||||||  |||||| || |||||||||||||    
T  1274540 gagttgtgttatttgaacatccatatatgtgacaacttttatg-caaccaaaattttacaaagggaatgagatattgacacaaaaacc 1274454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 7076464 - 7076543
Alignment:
Q  91 ttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||| ||| || ||||||||||    
T  7076464 ttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaagtaatggcacaaaaacc 7076543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 2972511 - 2972422
Alignment:
Q  79 aaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||| |||||||||||||||||  |||||||||| || ||||||||||| |||||||| || ||| |||||||||| |||||||||||    
T  2972511 aaatgacttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaatttcacgaaggaaatgaggtattgacacaaaaa 2972422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 13310063 - 13309979
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||| ||||||||||||||||||||| | |||||||||||    
T  13310063 ttgtgttatttgaacatccatttagatgacaatttttgagacaatcaaatttttacaaagaaaatgaggtattaacacaaaaacc 13309979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 35634723 - 35634811
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaa-gaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||| ||||||||  || || ||||||||||    
T  35634723 gagttgtgttatttgaacatccatatatgtgacaacttttatgataaccaaaattttacaaaggaaaatgaattattggcacaaaaacc 35634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 3565267 - 3565194
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    |||||||||||||||||||||||  |  |||| || ||||| ||||||||||||||||||||||||||||||||    
T  3565267 gagttgtgttatttgaacatccacttgagtgacaacttttgagacaaccaaaattttacaaagaaaatgaggta 3565194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 22972300 - 22972213
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||| | | || ||||| |||||| ||||||||||||||||||| ||||| | | |||||||||    
T  22972300 gagttgtgttatttgaacatccatttatataacaacttttgagacaactaaaattttacaaagaaaataaggtattaatacaaaaacc 22972213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 39591863 - 39591776
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| || ||| ||| ||  ||||||||||||||| ||||||||||||||||||  | ||||||| |||||    
T  39591863 gagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaacc 39591776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 39592255 - 39592168
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| || ||| ||| ||  ||||||||||||||| ||||||||||||||||||  | ||||||| |||||    
T  39592255 gagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaacc 39592168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 35646527 - 35646479
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  35646527 tgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaacc 35646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 33599147 - 33599061
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||  ||||||||||| |||| ||| ||||||||||| ||||||| | || ||||||||||||| ||| || ||||||||||    
T  33599147 atgagttgcattatttgaacaaccatttatatgataatttttatgacaactataaatttacaaagaaaaagagatattgacacaaaa 33599061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 39054768 - 39054701
Alignment:
Q  85 gttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    |||||||||||||||||||||| ||  ||| || |||||||| || ||||||||| ||||||||||||    
T  39054768 gttgtgttatttgaacatccatttagatgacaacttttgtgataatcaaaattttgcaaagaaaatga 39054701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 42175101 - 42175021
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaa 166  Q
    |||||||||||||||||||| |||||||||  || |||| |||||  |||||||||| |||| ||||  ||||||||||||||    
T  42175101 agttgtgttatttgaacatcgatatatgtgtcaacttttatgacagtcaaaattttataaaggaaat--ggtagtgacacaaa 42175021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 42475560 - 42475627
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||| |||| ||| |||||    
T  42475560 gagttgtgttatttgaacaaccatttatgtgataatttatgggacaatcaaaaatttataaaaaaaat 42475627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 19844198 - 19844285
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||   || |   |||||||||||  |||||||| |||||||||||||||| |||||| || |||| |||||    
T  19844198 gagttgtgttatttgaacaaatatttgattgataatttttaagacaaccataattttacaaagaaaaagaggtattggcacacaaacc 19844285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 25560906 - 25560992
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||| | | || ||  |||||||||||| |||||||| ||||||| |||||||| ||| || |||||||||||||    
T  25560906 gagttgtattatttgaataactatttaattgataatttttgggacaaccataattttataaagaaaa-gagatattgacacaaaaacc 25560992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 27488062 - 27488003
Alignment:
Q  91 ttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    ||||||||||||| || | | |||||||||||| || ||| |||||||||||||||||||    
T  27488062 ttatttgaacatctatttttatgataatttttgagataactaaaattttacaaagaaaat 27488003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 1079879 - 1079924
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||  ||||||||||||||||||||||||| || |||||||    
T  1079879 tgtgacaattaaaattttacaaagaaaatgaggtattggcacaaaa 1079924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 21156172 - 21156104
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    ||||||||||||||||||||||  | ||| ||||||   |||  |||| ||||||||||||||||||||    
T  21156172 tgagttgtgttatttgaacatcattttatatgataacccttgcaacaaacaaaattttacaaagaaaat 21156104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 33958147 - 33958234
Alignment:
Q  83 gagttgtgttatttgaacatccatatatg-tgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||| || |||| || | ||| || |||| ||||||||| || ||||||||||||| ||| || |||||||||||||    
T  33958147 gagttgtgttatttga-caaccatttaaggtgacaacttttatgacaaccataaatttacaaagaaaaagagatattgacacaaaaacc 33958234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 39807652 - 39807688
Alignment:
Q  134 aattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||| |||||||||| |||||||||||||    
T  39807652 aattttacaaaggaaatgaggtactgacacaaaaacc 39807688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 42356972 - 42357059
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42356972 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 42357059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 32924169 - 32924256
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32924169 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 32924256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 46624090 - 46624003
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46624090 gagttgtgttatttgaacatccatacatgtgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaacc 46624003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 36670895 - 36670989
Alignment:
Q  76 aaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  36670895 aaaaattgagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaatgaaatgaggtagtggcacaaaaacc 36670989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 41309300 - 41309215
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41309300 gagttgtgttatttgaacatccatatatgcgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaa 41309215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 27541390 - 27541477
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27541390 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 27541477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 52254026 - 52254113
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  52254026 gagttgtgtcatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaacc 52254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 19149175 - 19149086
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||    
T  19149175 atgagttgtgttatttgaacatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgagttagtggcacaaaaacc 19149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 52939834 - 52939747
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  52939834 gagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 52939747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 5244415 - 5244325
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  5244415 aatgaggtgtgttatttgaacatttatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 5244325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 5114261 - 5114176
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||| || ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  5114261 gagttgtgttatttgaacatctatttatgtgacaatttttatgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaa 5114176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 13735917 - 13735836
Alignment:
Q  79 aaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtga 160  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||||||||    
T  13735917 aaatgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttgcaaaggaaatgaggtagtga 13735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 16969452 - 16969539
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||| || |||||    
T  16969452 atgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgaggtagtggcataaaaa 16969539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 33939421 - 33939334
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||| |||||| |||||||||||||||||    
T  33939421 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattattcaaaggaaatgaagtagtgacacaaaaacc 33939334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 38926811 - 38926724
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| |||||||||| || ||| ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  38926811 gagttgtgttatttgaacatctatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaataaggtagtgacacaaaaacc 38926724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 35597344 - 35597258
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  35597344 agttgtgttatttgaatattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaacc 35597258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 44856141 - 44856051
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||| ||||||||||||| ||||||||    
T  44856141 aaaaagagttgtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaa 44856051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 47472512 - 47472426
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  47472512 gagttatgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaac 47472426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 7934158 - 7934073
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||| |||||||| ||||    
T  7934158 tgagttgtgttatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggatatgagatagtgacaaaaaa 7934073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 37503633 - 37503720
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  37503633 atgagttgtgttatttgaacatttatatatgtgataacttttgtgacaaccaaaattttgcaaaggaaatgagatattgacacaaaaa 37503720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 21217695 - 21217609
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  21217695 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 21217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 37056945 - 37057031
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  37056945 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaatattttacaaagaaaatgaggtattgacacaaaaac 37057031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 42358529 - 42358611
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||| |||||||||||    
T  42358529 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtattgacacaaaaa 42358611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 23592640 - 23592555
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  23592640 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 23592555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 13348022 - 13348109
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||| ||| ||| || ||||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  13348022 gagttatgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaaacc 13348109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 44413283 - 44413370
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||  |||||||||||||| |||||||||| || ||||||||||    
T  44413283 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattggcacaaaaacc 44413370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 35376969 - 35377054
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||| ||  ||| || |||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  35376969 gagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaa 35377054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 44383372 - 44383287
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||| ||| ||| || ||||| ||||| |||||||||| ||||||||||||||| |||||||||||    
T  44383372 gagttgtgttatttgaacatccatttatatgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaa 44383287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 288910 - 288822
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||| |||||||||||||| || | |||| |||| ||||||||||||||  ||||||| ||||||||||||||||    
T  288910 tgagttgtgttatttgaaaatccatatatgtgacaactattgtaacaatcaaaattttacaaaagaaatgagatagtgacacaaaaacc 288822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 26014995 - 26014908
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||| |||||| ||| |||||| || ||||||||||||||||||||||||||| ||||||||||  | ||||||||||    
T  26014995 gagttgtgttatttaaacatctatacatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaagggcacaaaaacc 26014908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 37302729 - 37302642
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||||||||||| || ||| || ||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||    
T  37302729 gagttgtcttatttgaacatccatacatttgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtggcacaaaaacc 37302642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 44813319 - 44813232
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||| ||||||||||||||| |||| |||||||| ||||||||||    
T  44813319 gagttgtgtgatttgaacatctatatatgtgacaacttttgtggcaatcaaaattttacaaaggaaattaggtagtggcacaaaaacc 44813232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 31157565 - 31157638
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    ||||||||||||||||||||||||||||||||||| || |||||| | ||||||||||||||| |||| |||||    
T  31157565 gagttgtgttatttgaacatccatatatgtgataacttctgtgactatcaaaattttacaaaggaaattaggta 31157638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 52326202 - 52326129
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    |||||||||||||||||||||||||||| ||| || |||| |||||| ||||||||||||||| ||||||||||    
T  52326202 gagttgtgttatttgaacatccatatatatgacaacttttatgacaatcaaaattttacaaaggaaatgaggta 52326129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 8847289 - 8847206
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||| | || |||||||| || |||||||||||||| ||||||||||| || ||||||||||    
T  8847289 ttgtgttatttgaacatccatatatgt-acaacttttgtgataatcaaaattttacaaataaaatgaggtattggcacaaaaacc 8847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 24256660 - 24256744
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||| ||| |||||||||| || |||||||||||  |||||||||||||| |||||||||| ||| |||||||    
T  24256660 agttgtgttatttgaaaatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaaa 24256744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 55151605 - 55151692
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||  |||||||||| || |||||| ||||  |||||||||||||| |||||| ||| |||||||||||||    
T  55151605 gagttgtgttatttgaacatttatatatgtgacaacttttgttacaattaaaattttacaaaggaaatgaagtattgacacaaaaacc 55151692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 20547901 - 20547963
Alignment:
Q  106 tatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  20547901 tatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaa 20547963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 51982282 - 51982196
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||| |||||| ||| | | |||||||| |||||| ||||||||| ||||||||| ||||| ||||||||||||    
T  51982282 gagttgtgttatttgaaaatccatttatataacaatttttgagacaactaaaattttataaagaaaataaggtattgacacaaaaac 51982196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 7668068 - 7668141
Alignment:
Q  75 taaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaa 148  Q
    ||||||| || |||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||| ||||    
T  7668068 taaaaaaagaattgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttgcaaggaaa 7668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 23600775 - 23600703
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    ||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||| |||    
T  23600775 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgangta 23600703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 28539629 - 28539697
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    ||||||||||||||||||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||    
T  28539629 agttgtgttatttgaacatccatttagatgataacttttgtgataaccaaaattttgcaaagaaaatga 28539697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 41505635 - 41505587
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41505635 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 41505587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 44445482 - 44445407
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgag 153  Q
    |||| ||||| ||||||||||||||| |||||||| | || |||| ||||||||||||||||| ||||||||||||    
T  44445482 aaaaagagttatgttatttgaacatcgatatatgtaacaacttttatgacaaccaaaattttataaagaaaatgag 44445407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 49780628 - 49780715
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| | | || || |||||||||||| ||||||||| || ||||||||||||| |||||| || ||||||||||    
T  49780628 gagttgtgttatttgaataactatttaagtgataatttttatgacaaccataaatttacaaagaaaaggaggtattggcacaaaaacc 49780715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 25641471 - 25641557
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||| |||||||||||||||| ||| ||| || ||||| |||||||||| ||||||| ||||||| ||||| || |||||||||    
T  25641471 gagttgtattatttgaacatccatttatatgacaacttttgagacaaccaaagttttacatagaaaataaggtattggcacaaaaac 25641557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 11630642 - 11630725
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||| ||| ||| ||| |||||||| |||||  ||||||||||||||||||||| ||| ||| | |||||||    
T  11630642 tgtgttatttgaacattcatttatatgacaatttttgagacaattaaaattttacaaagaaaatgaagtattgatataaaaacc 11630725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 14226593 - 14226680
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||  ||  ||||| | |||||||  ||||| ||||||||||||||||||||||  || |||||||||||||    
T  14226593 gagttgtgttatttgaacaatcaattatgtaacaatttttaagacaatcaaaattttacaaagaaaatgaaatattgacacaaaaacc 14226680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 35201323 - 35201409
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||| ||  ||| || ||||| |||||  |||||| |||||||||||| || || |||||||||||||    
T  35201323 agttgtgttatttgaacatccatttaaatgacaacttttgagacaattaaaattatacaaagaaaataagatattgacacaaaaacc 35201409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 42478142 - 42478056
Alignment:
Q  83 gagttgtgttatttgaacatccat--atatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||||||||  ||| ||| ||||  ||||||||| ||||||||    
T  42478142 gagttgtgttatttgaacatccatatatatatgataacttttgtgacaaccaaaa--ttaaaaaaaaaaaaaggtagtgatacaaaaac 42478056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 42889175 - 42889081
Alignment:
Q  76 aaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||| |||||||||||||| |||||| || ||  ||| || |||||  | |||||||||||||||||||||||||| || || ||||||||||    
T  42889175 aaaaaaggagttgtgttatttaaacatctatttagatgacaacttttgatataaccaaaattttacaaagaaaatgagttattggcacaaaaacc 42889081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 50559101 - 50559166
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    |||||||||||||||||| | || ||||||||||||||| ||||||||| || |||| ||||||||    
T  50559101 agttgtgttatttgaacaactatttatgtgataatttttatgacaaccataaatttataaagaaaa 50559166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 39630505 - 39630577
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggt 155  Q
    ||||| ||||||||||||||| || ||| | |||||||||  ||||| |||||||||||||||||||| ||||    
T  39630505 gagttttgttatttgaacatctatttatataataatttttaagacaatcaaaattttacaaagaaaattaggt 39630577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 44413849 - 44413897
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| ||||||||||||||||||||||| || |||||||||||||    
T  44413849 tgtgacaatcaaaattttacaaagaaaatgagatattgacacaaaaacc 44413897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 49087038 - 49087082
Alignment:
Q  126 acaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||| |||||||||||||||| |||||||||||||    
T  49087038 acaaccaaaatttttcaaagaaaatgaggtattgacacaaaaacc 49087082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 33791699 - 33791742
Alignment:
Q  124 tgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  33791699 tgacaaccaaaatttcacaaagaaaatgaggtattgacacaaaa 33791742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 44463538 - 44463455
Alignment:
Q  85 gttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||| |  ||| |||||| ||||| || || ||||||||||||||||||||| | || ||| |||||||    
T  44463538 gttgtgttatttgaacatcaaattatatgataacttttgagataatcaaaattttacaaagaaaatgtgatattgatacaaaaa 44463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 45711363 - 45711414
Alignment:
Q  119 ttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  45711363 ttttgtaacaaccaaaattttacaaagaaaatgaagtattgacacaataacc 45711414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 45000200 - 45000159
Alignment:
Q  129 accaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  45000200 accaaaattttacaaaggaaatgaggtagtggcacaaaaacc 45000159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 50318316 - 50318361
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  50318316 tgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaa 50318361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 41505663 - 41505631
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtga 114  Q
    |||||||||||||||||||||||||||||||||    
T  41505663 tgagttgtgttatttgaacatccatatatgtga 41505631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 45693924 - 45693879
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaacca 132  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||||    
T  45693924 tgtgttatttgaacaaccatttgagtgataatttttgtgacaacca 45693879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 42768388 - 42768300
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  42768388 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaactaaaattttacaaaggaaatgaggcagtgacacaaaaacc 42768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 32501087 - 32501169
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32501087 ttgtgttatttgaacatccatatatgtgagaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 32501169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 22719624 - 22719536
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| |||||||||||| || |||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  22719624 tgagttgtgttatttgaacagccatatatgtgacaacttttgtgataaccaaaattttacaaagaaaatgaggtagttgcacaaaaacc 22719536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 34186790 - 34186703
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  34186790 gagttgtgttatttgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaacc 34186703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 36251503 - 36251425
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  36251503 tgttatttgaacatccatatatgtgataactttcgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaa 36251425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 37449303 - 37449400
Alignment:
Q  73 attaaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||  ||||||||||    
T  37449303 attataaaaagagttgtgttatttgaatatccatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtagcacaaaaacc 37449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 5277393 - 5277473
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5277393 tgttatttgaacatccatacatgtgacaatttatgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaac 5277473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 12898817 - 12898904
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| ||||| | ||||||||    
T  12898817 gagttatgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcgcaaaaacc 12898904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 27325941 - 27325854
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||||||||||| ||||||||||    
T  27325941 gagttgtgttatttgaacatccatatatgtgacaactttcgtgataatcaaaattttacaaaggaaatgaggtagtggcacaaaaacc 27325854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 29025443 - 29025356
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||| ||||||||| ||| ||| || ||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  29025443 gagttgtgttatttaaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaacc 29025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 36660339 - 36660425
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||| ||| |||||||| ||||    
T  36660339 agttgtgttatttgaacatccataaatgtgataacttttgtgacaatcaaaattttataaagaaaatgaagtattgacacaataacc 36660425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 4054172 - 4054261
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||| ||||||||  ||||||||||||||||||||||||    
T  4054172 atgagttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaactttacaaatgaaatgaggtagtgacacaaaaacc 4054261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 11253430 - 11253517
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||||||| ||| || ||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  11253430 gagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaacc 11253517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 43397960 - 43397877
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  43397960 tgtgttaattgaacatccatacatgtgacagcttttgtgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaacc 43397877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 7272035 - 7271946
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||| |||||||||||| |||||| || ||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||    
T  7272035 atgagttgtgttatatgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaagaaatgagatagtgacacaaaaacc 7271946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 24479406 - 24479323
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaa 166  Q
    |||||||||||||||| ||| ||||||| |||||| |||||||||||| |||||||||||||| ||||||| || |||||||||    
T  24479406 gagttgtgttatttgagcattcatatatatgataacttttgtgacaactaaaattttacaaaggaaatgagatattgacacaaa 24479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 34639716 - 34639629
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||| ||  |||||||||||| || || |||||||||||||| |||||||||||||||||||| ||||    
T  34639716 gagttatgttatttgaacatccatttacatgataatttttgagagaatcaaaattttacaaataaaatgaggtagtgacacaataacc 34639629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 37133750 - 37133835
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||| ||||||||| ||  ||| || ||||||||||||||||||||||||||||||||||  || |||||||||||    
T  37133750 gagttgtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaa 37133835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 32133505 - 32133425
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacaca 164  Q
    ||||||||||||||||||||||| ||| |||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||    
T  32133505 agttgtgttatttgaacatccatttatatgataaattttgagataaccaaaattttacaaataaaataaggtattgacaca 32133425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 36816507 - 36816589
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||| |||||||||| || |||||||| || ||||||||| |||||||||||| ||| | |||||||||    
T  36816507 ttgtgttatttgaacatctatatatgtgacaacttttgtgataatcaaaattttgcaaagaaaatgacgtattaacacaaaaa 36816589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 10839370 - 10839437
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    |||| ||||||||||||||||||| | | |||||||||||| |||||| |||||||||||||||||||    
T  10839370 gagtagtgttatttgaacatccatttttatgataatttttgagacaactaaaattttacaaagaaaat 10839437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 13106663 - 13106578
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||| |||| || |||| || |||| | ||||||| || ||||||||||||| |||||| |||||||||||    
T  13106663 gagttgtgttatttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaaagaggtattgacacaaaaa 13106578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 7598892 - 7598805
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| ||  ||| ||| || ||||| ||||||||||| |||||| ||||||| ||||| ||||| |||||||    
T  7598892 tgagttgtgttatttgaacattcaattatatgaaaacttttgagacaaccaaaa-tttacatagaaaataaggtattgacataaaaacc 7598805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 23754593 - 23754681
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||   | ||| ||| ||  ||||  ||||||||||||||||||||||||||||  | |||||||||||||    
T  23754593 tgagttgtgttatttgaacattattttatatgacaacctttgcaacaaccaaaattttacaaagaaaatgagtgattgacacaaaaacc 23754681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 31249451 - 31249499
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||    
T  31249451 tgtgacaaccaaaattttacaaaggaaatgaggtagtggtacaaaaacc 31249499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 10692614 - 10692552
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaag 145  Q
    ||||||| |||||||||||||||||||||||  || || | |||||| |||||||||||||||    
T  10692614 gagttgtattatttgaacatccatatatgtgtcaacttctctgacaatcaaaattttacaaag 10692552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 32752597 - 32752503
Alignment:
Q  73 attaaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||| ||||||||||||||||||| |||| |   ||||||||| || ||||| ||    |||||||||||||||||| | ||||||||||    
T  32752597 attaaaaaaagagttgtgttatttgaacaaccatttcaatgataatttatgggacaatcattgatttacaaagaaaatgaggaattgacacaaaa 32752503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 5740672 - 5740760
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| |||| |    || || ||||  |||||||| |||||||||||||||| ||||||  ||||||||||||    
T  5740672 tgagttgtgttatttgaacagccattttatagacaacttttaggacaaccataattttacaaagaaaaagaggtatcgacacaaaaacc 5740760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 12734897 - 12734984
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||| |||||||||||||||   || | | ||||||||| ||||||||| |||| ||||||| |||||  ||||| |||||||||||    
T  12734897 atgagatgtgttatttgaacaataatttgtatgataatttatgtgacaactaaaaatttacaatgaaaagtaggtattgacacaaaaa 12734984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 10731690 - 10731644
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||| ||||||||||||||| |||||| ||| |||||||||||    
T  10731690 tgtgacaatcaaaattttacaaaggaaatgaagtattgacacaaaaa 10731644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 21526162 - 21526252
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatat-atgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    |||| |||||||||||||| |||| |||| | || ||| || ||||| |||||||| ||||| |||||||||| |||||| || |||||||    
T  21526162 aaaaagagttgtgttatttaaacaaccatttgatttgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaa 21526252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 144150 - 144211
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    |||||||| |||| |||| | | ||||||||||||||| ||||| || ||||||||||||||    
T  144150 tgttatttcaacaaccatttctatgataatttttgtgataaccataaatttacaaagaaaat 144211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 36969562 - 36969627
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaa 148  Q
    |||||||||||||||||||||||| | | ||| || || || |||||||| | |||||||||||||    
T  36969562 gagttgtgttatttgaacatccatttgtttgacaacttatgcgacaaccatatttttacaaagaaa 36969627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 2883330 - 2883286
Alignment:
Q  124 tgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||| ||||||||||||||||||||| ||| | |||||||||    
T  2883330 tgacaactaaaattttacaaagaaaatgaagtattaacacaaaaa 2883286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 3151236 - 3151280
Alignment:
Q  124 tgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||| ||||||||||||||||||||| ||| | |||||||||    
T  3151236 tgacaactaaaattttacaaagaaaatgaagtattaacacaaaaa 3151280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 36514451 - 36514539
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||| |||||| |||||||| |||| | |||||||||||||| || ||||  ||||||||||| ||||  ||||| ||| || ||||||    
T  36514451 tgaggtgtgttgtttgaacaaccatttgtgtgataatttttgggagaaccgtaattttacaaaaaaaaataggtattgatacgaaaacc 36514539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 32316816 - 32316903
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32316816 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaacc 32316903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 552977 - 552889
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  552977 tgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 552889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 33430250 - 33430337
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33430250 gagttgtgttatttggacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 33430337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 15974791 - 15974704
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  15974791 gagttgtgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaagtagtaacacaaaaacc 15974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 18737460 - 18737542
Alignment:
Q  88 gtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  18737460 gtgttatttgaacatccatgtatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgtcacaaaaacc 18737542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 31077979 - 31077890
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| || |||| |||||| || ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  31077979 atgagttgtgttatttgaatattcatacatgtgacaacttttgtgacaaccaaaattttacaaaggaagtgaggtagtgacacaaaaacc 31077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 26595532 - 26595445
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||| ||| || |||||  ||||||||||||||||||||||||||||||| |||||||||||||    
T  26595532 gagttgtgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtattgacacaaaaacc 26595445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 16199633 - 16199547
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  16199633 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 16199547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 13689882 - 13689967
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||| ||||||||| |||| |||||||||| |||||||||||    
T  13689882 gagttgtgttatttgaacatccatatatgtgacaatttttacgacaactaaaattttataaaggaaatgaggtattgacacaaaaa 13689967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 14818117 - 14818028
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||  |||||| ||| || |||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  14818117 atgagttgtgttatttgaacatttatatatatgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaaaacc 14818028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 1156903 - 1156816
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||  |||| ||||||| ||||| ||||||||||    
T  1156903 gagttgtgttatttgaacatccatatatttgataacttttgtgacaatcaaaattttgtaaaggaaatgagatagtggcacaaaaacc 1156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 34047570 - 34047483
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||| || || ||||||||||    
T  34047570 gagttttgttatttgaacatccataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaaagagatattggcacaaaaacc 34047483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 11612370 - 11612298
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    |||||||||||||||| ||  |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  11612370 agttgtgttatttgaatatttatatatgtgataatttttgtgataatcaaaattttacaaagaaaatgaggta 11612298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 22079449 - 22079536
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||||| ||  |||  | ||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  22079449 atgagttgtgttatttgaacatccatttagatgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaa 22079536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 5694038 - 5694124
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||| ||||| ||| ||||||| || ||||| ||||||| ||||||||||||| |||||||||| |||||||||||    
T  5694038 tgagttgtgttatttaaacattcatgtatgtgacaacttttgagacaacctaaattttacaaaggaaatgaggtattgacacaaaaa 5694124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 277174 - 277089
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||| ||||| | | ||  ||| |||||||||||||||||||||||||||||||||||||  || |||||||||||    
T  277174 gagttgtgttatttaaacattcctttagatgacaatttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaa 277089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 4820550 - 4820465
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||| | || ||  |||||| ||||| ||||| |||||||||||||||||||||||| | |||||||||||    
T  4820550 gagttgtgttatttgaacaactatttacatgataacttttgagacaatcaaaattttacaaagaaaatgaggcattgacacaaaaa 4820465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 5080465 - 5080541
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||||||||||||||||            |||||||||||||||| |||||||||||||||||||||||    
T  5080465 atgagttgtgttatttgaacatccatatatgtgataa------------ccaaaattttacaaaggaaatgaggtagtgacacaaaaac 5080541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 30457688 - 30457601
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||| || ||||||||| ||| ||| || ||||| || ||||||||||| ||| ||||||||||||| |||||||||||||    
T  30457688 gagttgtgttaattcaacatccatttatatgacaacttttgagataaccaaaatttcacatagaaaatgaggtattgacacaaaaacc 30457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 2241942 - 2242000
Alignment:
Q  112 tgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||| ||||||||||||||||||  |||||||||||||||| | |||||||||||||    
T  2241942 tgataacttttgtgacaaccaaaataatacaaagaaaatgaggcattgacacaaaaacc 2242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 11014890 - 11014963
Alignment:
Q  95 ttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| || ||| |||||| ||||| ||||| ||||||||||  |||||||||||||| |||||||||||    
T  11014890 ttgaacatctatttatatgataacttttgagacaatcaaaattttatgaagaaaatgaggtattgacacaaaaa 11014963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 17551265 - 17551353
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||| || | | ||| |   ||||||||||||||||||| | ||||||||||||| | |||||||||||||    
T  17551265 atgagttgtgttatttgaacatctatttttatgacagcatttgtgacaaccaaaattt-ataaagaaaatgagggattgacacaaaaacc 17551353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 21968776 - 21968866
Alignment:
Q  77 aaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||| ||||||||||||||||| |||||| ||| ||||||  |||| |||||| |||| ||||| || ||||||||||| || |||||||||    
T  21968776 aaaaaagagttgtgttatttgaagatccatttatttgataa--tttgagacaacaaaaaatttacgaataaaatgaggtattggcacaaaaac 21968866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 30423443 - 30423524
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    |||||||||||||||||| || |||||||||| |||||  |||| ||||  |||| ||||||||||||||| ||| ||||||    
T  30423443 ttgtgttatttgaacatctatttatgtgataacttttgatacaatcaaagctttataaagaaaatgaggtattgatacaaaa 30423524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 33603168 - 33603253
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||| ||||||||||||| ||| ||| || ||||  ||    |||||||||||||||||||||||||| |||||||||||    
T  33603168 gagttgtgttttttgaacatccatttatatgacaacttttaagattgtcaaaattttacaaagaaaatgaggtattgacacaaaaa 33603253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 8098524 - 8098572
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  8098524 tgtgacaaccaaaattttagaaaggaaataaggtagtgacacaaaaacc 8098572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 3853206 - 3853280
Alignment:
Q  94 tttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| ||| ||| ||| || ||||| |||||| || ||||||||||||||||||| || |||||||||||    
T  3853206 tttgaacattcatttatatgacaacttttgagacaacaaagattttacaaagaaaatgagatattgacacaaaaa 3853280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 31883191 - 31883276
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||| ||||||||||| | || |   ||| |||||||| |||||||| |||||||||||||||| |||||  |||||||||||    
T  31883191 gagttgtattatttgaacaactatttgattgacaatttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaa 31883276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 3552046 - 3552125
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaa 165  Q
    |||||||||||||||| |||| |   |||||| |||||||| || || || |||||||||||||| ||||| ||||||||    
T  3552046 ttgtgttatttgaacaaccatttggatgataacttttgtgataatcataaatttacaaagaaaataaggtattgacacaa 3552125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 10826682 - 10826620
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    ||||||||||||||| |||| |  ||||||| ||||||||||||||  | |||||||||||||    
T  10826682 tgtgttatttgaacaaccatttgagtgataacttttgtgacaaccactaatttacaaagaaaa 10826620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 33657067 - 33657006
Alignment:
Q  88 gtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    |||||||||||||| | ||  ||||||  |||||||||||||||| |||||||||| |||||    
T  33657067 gtgttatttgaacaactattcatgtgaccatttttgtgacaaccataattttacaacgaaaa 33657006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 32442593 - 32442537
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaatttta 140  Q
    ||||||||||||| ||||||||| ||| | |||||||||| |||||  |||||||||    
T  32442593 agttgtgttatttcaacatccatctatatcataatttttgagacaattaaaatttta 32442537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 26732408 - 26732321
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26732408 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaacc 26732321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 43175172 - 43175080
Alignment:
Q  78 aaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  43175172 aaaatgagttgtgttatttgaacatccatatatgtgacaacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaacc 43175080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 26724860 - 26724947
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  26724860 gagttgtgttatttgaacatccatatatgtgataacttttgtaacaactaaaattttacaaaggaaatgaggtagtgacacaaaaacc 26724947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 38376376 - 38376463
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  38376376 atgagttgtgttatttgaacatctatatatgtgataatttttgtgacaatcaaaattttacaaagaaaatgagatagtggcacaaaaa 38376463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 51986225 - 51986138
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  51986225 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 51986138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 53801646 - 53801733
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  53801646 tgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaac 53801733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 23369220 - 23369307
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  23369220 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggtagtggcacaaaaacc 23369307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 44539917 - 44539830
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  44539917 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgtcacaaaaacc 44539830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 37997433 - 37997352
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  37997433 tgtgctatttgaacatctatatatgtgataatttttgttacaaccaaaattttacaaagaaaatgaggtattgacacaaaaa 37997352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 10250406 - 10250490
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  10250406 ttgtgttatttgaacatccatatatgcgacaacttttgtgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaacc 10250490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 26492190 - 26492103
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||    
T  26492190 gagttgtgttatttgaacatctatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaagtagtggcacaaaaacc 26492103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 29175408 - 29175321
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  29175408 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagtaaatgagctattgacacaaaaacc 29175321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 37297231 - 37297145
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  37297231 gagttgtgttatttgaacatccatatatttgacaacttttgtgacaaccaaaattttac-aaggaaatgaggtagtgacacaaaaacc 37297145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 46213157 - 46213066
Alignment:
Q  79 aaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||||| ||||||||||||  ||||||||||    
T  46213157 aaatgagttgtgttatttgaaaatccatatatgtgaaaacttttgtaacaaccaaaattttacaaaggaaatgaggtagttgcacaaaaacc 46213066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 31641453 - 31641538
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  31641453 gagttgtgttatttgaacattcatatacgtgataacttttgtgacaaccaaaattttataaaggaaataaggtagtgacacaaaaa 31641538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 39440667 - 39440582
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  39440667 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaatcaaaattttagaaaggaaatgaggtagtgacacaaaaa 39440582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 27050978 - 27051061
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  27050978 tgtgttatttgaacattcataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgagatattgacacaaaaacc 27051061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 11068868 - 11068786
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  11068868 ttgtgttatttgaacattcatatatgtgacaacttttgtggcaaccaaaattttacaaaggaaatgaggcagtgacacaaaaa 11068786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 38382504 - 38382418
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  38382504 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 38382418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 47182024 - 47181938
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  47182024 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 47181938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 48402085 - 48402171
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  48402085 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 48402171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 39478620 - 39478535
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||  || ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39478620 gagttgtgtttattaaacatccatatatatgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaa 39478535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 24575742 - 24575826
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||||||||| |||| |||||||||| || ||||||||||    
T  24575742 ttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaacc 24575826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 27965168 - 27965083
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||||||||  || | ||||||||||||||||||||||||    
T  27965168 gagttgtgttatttgaacatccatatatgtgacaacttctgtgacaaccaaaatttt--aatggaaatgaggtagtgacacaaaaacc 27965083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 36178089 - 36178002
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||  |||||||||    
T  36178089 gagttgtgttatttgaacatttatatatgtgataacttttgtgacaactaaaattttataaaggaaatgaggtagtggtacaaaaacc 36178002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 42853760 - 42853673
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| |  |||| |||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||    
T  42853760 gagttgtgttatttgaacatccatttgagtgacaatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaacc 42853673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 15175729 - 15175643
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||| |||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||||| |  |||||||||    
T  15175729 gagttgtattatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattagcacaaaaac 15175643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 56363933 - 56364017
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    |||||||||||||||||||||||| ||  ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  56363933 gagttgtgttatttgaacatccatttacatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaa 56364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 38134528 - 38134449
Alignment:
Q  91 ttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||| |||| |||||| || |||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  38134528 ttatttgaacattcatacatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggcagtgacacaaaaacc 38134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 26907969 - 26908055
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||| ||| | ||||| ||||| |||||||||    
T  26907969 tgagttgtgttatttgaatatccatatatgtgataatttttatgacaattaaaattttataaaaataatgaagtagtaacacaaaaa 26908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 34616744 - 34616658
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||||| || ||| ||| || ||||| |||||||||||||||| |||||||||||| || ||||||||||||    
T  34616744 gagttgtgttatttgaacatctatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagatattgacacaaaaac 34616658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 5622641 - 5622554
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||| ||| |||||||| | || |||||||| ||| |||||||||||||| ||||||||||||  ||||||||||    
T  5622641 gagttgtgttatttgaagatctatatatgtcacaacttttgtgataactaaaattttacaaaggaaatgaggtagttgcacaaaaacc 5622554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 19473836 - 19473931
Alignment:
Q  75 taaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| || |||||||||||||| || ||| ||| ||| || ||||| ||||| |||||||||||||||||||||| ||| |||||||||||||    
T  19473836 taaaaaaagatttgtgttatttgaagatgcatttatatgacaacttttgagacaatcaaaattttacaaagaaaatgaagtattgacacaaaaacc 19473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 56474656 - 56474742
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||  |  | | |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  56474656 agttgtgttatttgaacatctattcacataacaatttttgagacaaccaaaactttacaaagaaaatgaggtattgacacaaaaacc 56474742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 39655007 - 39654922
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||| | || ||  |||||||||||  |||||||| || |||||||||||||||||||| |||||||||||    
T  39655007 gagttgtgttatttgaacaactatttagatgataatttttaagacaaccataaatttacaaagaaaatgaggtattgacacaaaaa 39654922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 29531533 - 29531581
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29531533 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 29531581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 2575678 - 2575765
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||| || ||| ||| || |||||||||||| ||| ||||||||||||||||||  | ||||||| |||||    
T  2575678 gagttgtgttatttgaacatctatttatatgacaacttttgtgacaactaaagttttacaaagaaaatgagagattgacacacaaacc 2575765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 40348972 - 40348890
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||     |||| || ||||||||||| |||||||||  |||||||||||| ||||||||||||||||    
T  40348972 gagttgtgttatttgaacattca-----gtgacaacttttgtgacaatcaaaattttttaaagaaaatgagatagtgacacaaaaacc 40348890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 45083149 - 45083086
Alignment:
Q  89 tgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    |||||||||||||||||||||||||| || |||| | |||| |||||||||| |||||||||||    
T  45083149 tgttatttgaacatccatatatgtgacaacttttattacaatcaaaattttataaagaaaatga 45083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 46634244 - 46634198
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  46634244 tgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaa 46634198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 50831643 - 50831728
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||| |||| |   ||| || ||||| |||||||| |||||||||||||||| |||||  |||||||||||    
T  50831643 gagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaa 50831728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 2268434 - 2268482
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||    
T  2268434 tgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaacc 2268482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 38510659 - 38510731
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggt 155  Q
    |||||||||||||||| |||||  |||||||  |||||||||||||||| |||||||||| |||| |||| ||||    
T  38510659 atgagttgtgttatttcaacatttatatatg--ataatttttgtgacaatcaaaattttataaaggaaataaggt 38510731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 42491257 - 42491170
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| |||| |   ||| || ||||| |||||||| ||||| |||||||||| |||||| || ||||||||||    
T  42491257 gagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaaacc 42491170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 50721632 - 50721719
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||  | ||| ||| ||  ||||  ||||| ||||||||||||||||||||||  | |||||||||||||    
T  50721632 gagttgtgttatttgaacatcattttatatgacaacctttgcaacaactaaaattttacaaagaaaatgagtgattgacacaaaaacc 50721719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 19232022 - 19232088
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    ||||||||||||||||||| |||  ||||||| |||||||   |||||||||||||| |||||||||    
T  19232022 gagttgtgttatttgaacaaccaattatgtgacaatttttagtacaaccaaaattttgcaaagaaaa 19232088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 31995804 - 31995889
Alignment:
Q  86 ttgtgttatttgaacatccat--atatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||| ||||  |||| | | || ||||| |||||  ||||||||| ||||||||||||||| ||||||||||||    
T  31995804 ttgtgttatttgaacaaccatttatatataacaacttttgagacaattaaaattttagaaagaaaatgaggtattgacacaaaaac 31995889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 39195240 - 39195170
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgag 153  Q
    ||||||||||||||||||||| || ||| ||| ||  ||||||| || |||| ||||||||||||||||||    
T  39195240 gagttgtgttatttgaacatctatttatatgacaacatttgtgataatcaaagttttacaaagaaaatgag 39195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 1627484 - 1627533
Alignment:
Q  121 ttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||| || |||||||||||||||||||| || ||||||||||    
T  1627484 ttgtgacaaccataaatttacaaagaaaatgaggtattggcacaaaaacc 1627533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 39447924 - 39447848
Alignment:
Q  88 gtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaa 165  Q
    |||||||| ||||| |||| |||||||||| | | | || || |||||||||||||||||||||||||| ||||||||    
T  39447924 gtgttattcgaacaaccatttatgtgataactct-gagataatcaaaattttacaaagaaaatgaggtattgacacaa 39447848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 5233557 - 5233621
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaga 146  Q
    |||||||||||||||||||||| || ||||| | || |||||  |||| ||||||||||||||||    
T  5233557 tgagttgtgttatttgaacatctatttatgtaacaacttttgaaacaatcaaaattttacaaaga 5233621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 24509279 - 24509355
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacac 163  Q
    ||||||||||||||| | || |  ||||||||||||||||||||||  | |||||||||||||  || |||||||||    
T  24509279 tgtgttatttgaacaactatttgagtgataatttttgtgacaaccactaatttacaaagaaaaatagatagtgacac 24509355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 46634272 - 46634240
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtga 114  Q
    |||||||||||||||||||||||||||||||||    
T  46634272 tgagttgtgttatttgaacatccatatatgtga 46634240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 47288268 - 47288200
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    ||||| ||||||||||||| | |||| | ||||||||||||||  ||||||| || |||||||||||||    
T  47288268 atgagatgtgttatttgaataaccatttgtgtgataatttttggaacaaccataaatttacaaagaaaa 47288200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 53786102 - 53786134
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtga 114  Q
    |||||||||||||||||||||||||||||||||    
T  53786102 tgagttgtgttatttgaacatccatatatgtga 53786134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 7632348 - 7632419
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgag 153  Q
    ||||||||||||||||||||||  | ||| ||| ||  ||||  ||||||||||||||||||| ||||||||    
T  7632348 tgagttgtgttatttgaacatcattttatatgacaacctttgcaacaaccaaaattttacaaataaaatgag 7632419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 39606157 - 39606086
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    ||||||||| ||||||||||||  |||||||||| || ||||  || ||||||||||||| |||| ||||||    
T  39606157 atgagttgtattatttgaacatttatatatgtgacaacttttacgataaccaaaattttataaaggaaatga 39606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 157
Target Start/End: Complemental strand, 42360300 - 42360265
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtag 157  Q
    |||||||||||||||||||||||| |||||||||||    
T  42360300 tgtgacaaccaaaattttacaaaggaaatgaggtag 42360265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 31090590 - 31090676
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||   |||||  ||||||||| |||||||| |||  | |||||||||||    
T  31090590 tgagttgtgatatttaaacatccatttatatgataattttgaagacaattaaaattttaaaaagaaaacgagacattgacacaaaaa 31090676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 42395928 - 42395998
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    |||||||||||||||||| |  ||| |||||||||||| || ||  ||| ||||||||| |||||||||||    
T  42395928 ttgtgttatttgaacatctacttatatgataatttttgagataattaaagttttacaaaaaaaatgaggta 42395998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 50608551 - 50608597
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||    
T  50608551 tgtgacaactaaaattttacaaaggaaatgagatattgacacaaaaa 50608597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 35897883 - 35897799
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||| || |||||||||| |||| ||| |||||| ||||| |||||| | | |||||||| |||||||| ||| |||||||||||    
T  35897883 gagttatgctatttgaacaaccatttatatgataacttttgggacaactata-ttttacaatgaaaatgaagtattgacacaaaaa 35897799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 49449093 - 49449138
Alignment:
Q  125 gacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||||    
T  49449093 gacaatcaaaattttacaaagaaaatgaggtattagcacaaaaacc 49449138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 20760441 - 20760354
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataat-ttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| ||||||||||| |||| |   ||||||| ||||| |||||||| ||||||| ||| |||| |||||| |||||||||||    
T  20760441 atgagttgtattatttgaacaaccatttgattgataattttttgggacaaccataattttataaa-aaaaagaggtattgacacaaaaa 20760354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 20766832 - 20766745
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataat-ttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||| ||||||||||| |||| |   ||||||| ||||| |||||||| ||||||| ||| |||| |||||| |||||||||||    
T  20766832 atgagttgtattatttgaacaaccatttgattgataattttttgggacaaccataattttataaa-aaaaagaggtattgacacaaaaa 20766745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 39259136 - 39259080
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaatttt 139  Q
    ||||||||||||||||| |||||| ||  ||| ||||||||||||||  ||||||||    
T  39259136 gagttgtgttatttgaatatccatttagatgacaatttttgtgacaattaaaatttt 39259080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 42360328 - 42360296
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtga 114  Q
    ||||||||||||||||||||| |||||||||||    
T  42360328 tgagttgtgttatttgaacattcatatatgtga 42360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 43487562 - 43487475
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  43487562 gagttgtgttatttgaacatccatatatgtgacaatttttgtaacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 43487475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 9207772 - 9207686
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9207772 agttgtgttatttgaacatctatatatgtgataatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 9207686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 9647315 - 9647228
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  9647315 gagttgtgttatttgaacattcatatatgcgataacttttgtgacaaccaaaattttacaaaggaaatgaagtagtgacacaaaaacc 9647228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 18254097 - 18254184
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  18254097 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaacc 18254184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 2076752 - 2076667
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2076752 gagttgtgttatttgaacatcaatagatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaa 2076667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 22888705 - 22888792
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||| || ||||||||||    
T  22888705 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaacc 22888792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 6049236 - 6049320
Alignment:
Q  86 ttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||| || ||||||||||    
T  6049236 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaacc 6049320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 1248869 - 1248782
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||  |||||||||||||| ||||||||||||| ||||||||||    
T  1248869 gagttgtgttatttgaacatccatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaggtagtggcacaaaaacc 1248782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 9194424 - 9194337
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||  |||||||||| || ||||||||||    
T  9194424 gagttgtgttatttgaacattcatatatgtaacaatttttgtgacaaccaaaattttacaaaagaaatgaggtaatggcacaaaaacc 9194337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 9990874 - 9990787
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||| ||||||  |||||||||    
T  9990874 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaattaaaattttacaaaggaaatgaagtagtggtacaaaaacc 9990787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 41195767 - 41195680
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  41195767 gagttgtgttatttgaacattcatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaacc 41195680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 42091393 - 42091479
Alignment:
Q  86 ttgtgttatttgaacatccatatat--gtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42091393 ttgtgttatttgaacatctatatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaacc 42091479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 42421786 - 42421869
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaa 166  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  42421786 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaa 42421869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 37737859 - 37737944
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  37737859 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacaaccaaaactttacaaaggaaatgagatattgacacaaaaa 37737944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 41056636 - 41056721
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  41056636 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 41056721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 9760201 - 9760117
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaa 167  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| | ||| ||||||||||||| |||||||    
T  9760201 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaatttttccaaggaaatgaggtagtggcacaaaa 9760117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 41042437 - 41042350
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||||| || ||||| |||||||    
T  41042437 gagttctgttatttgaacatccatatatgtgacaatttttatgacaaccaaaattttataaaggaaatgagatattgacataaaaacc 41042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 25270470 - 25270556
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||| | |||||||||||||||| ||||||||||||||| ||||||||||||    
T  25270470 gagttgtgttatttgaacatccatttatatgacaactttcgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 25270556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 32477515 - 32477442
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggta 156  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||| ||||||||||    
T  32477515 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggta 32477442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 19633466 - 19633378
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgt-gataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||||||  |||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  19633466 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaacc 19633378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 19830367 - 19830279
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgt-gataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||||||  |||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  19830367 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaacc 19830279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 3097749 - 3097835
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||| ||| ||| || ||||| |||||||||||||||| |||||||||||| || | ||||||||||    
T  3097749 gagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagttatttacacaaaaac 3097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 3838767 - 3838853
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||| |||||||||| || |||||||| ||  |||||||||||||| |||||| | |||||||||||||    
T  3838767 tgagttgtgttatttgaacatctatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaagcagtgacacaaaaa 3838853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 13333058 - 13333144
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||||||||||||| || ||| ||| || ||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  13333058 gagttgtgttatttgaacatcgatttatatgacaacttttgagacaaccaaaattttataaagaaaatgatgtattgacacaaaaac 13333144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 21611543 - 21611604
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaa 144  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  21611543 gagttgtgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttacaaa 21611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 34944979 - 34945063
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||| ||||| || ||||||||||| || ||| ||||||||||||||||||||||  ||||||||||||| ||||||||    
T  34944979 agttgtgttaattgaatattcatatatgtgacaactttcgtgacaaccaaaattttacaaaagaaatgaggtagtggcacaaaaa 34945063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 7698355 - 7698269
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||| ||||||| ||| ||||||||| |||||||| ||  |||||||||||||| |||| |||||||| ||||||||    
T  7698355 tgagttgtgttattagaacatctatacatgtgataacttttgtgataattaaaattttacaaaggaaattaggtagtggcacaaaaa 7698269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 8848585 - 8848654
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    ||||||||||||||||||||| || ||  |||||||||||||||||| ||||||||| ||||||||||||    
T  8848585 gagttgtgttatttgaacatctatttagatgataatttttgtgacaatcaaaattttgcaaagaaaatga 8848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 27490618 - 27490703
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||||||||||||||||| |   ||| || ||||||||||| |||||||||||||||||||||| ||| | |||||||||    
T  27490618 gagttgtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaa 27490703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 22416357 - 22416309
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  22416357 tgtgacaaccaaaattttacaaagaaaatgaggcagtggcacaaaaacc 22416309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 7663955 - 7664041
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||  ||| || |||| ||||||  ||||||||| || ||||||||||||| |||||| |||||||||||||    
T  7663955 gagttgtgttatttgaacaatcatttaggtgacaatttta-tgacaaccataaatttacaaagaaaaagaggtattgacacaaaaacc 7664041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 28495042 - 28494956
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||| |||| ||  | | || |||||||||||||| || |||||| ||||||| ||||| |||||||||||||    
T  28495042 agttgtgttatttgaacaaccatttaaattacaacttttgtgacaaccataaatttacacagaaaattaggtattgacacaaaaacc 28494956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 19642777 - 19642696
Alignment:
Q  87 tgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||||| ||||||||| ||| ||| || ||||| |||||||| |||||| |||||||||||| | | |||||||||||    
T  19642777 tgtgttatttaaacatccatttatatgagaacttttgagacaaccacaattttgcaaagaaaatgaagcattgacacaaaaa 19642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 6511395 - 6511347
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  6511395 tgtgacaatcaaaattttataaaggaaatgaggtagtgacacaaaaacc 6511347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 17388530 - 17388578
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  17388530 tgtgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaacc 17388578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 29349688 - 29349622
Alignment:
Q  84 agttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    |||| |||||||| ||||||||| ||  ||| || ||||||||||| ||||||||||||||||||||    
T  29349688 agttatgttatttcaacatccatttagatgacaacttttgtgacaatcaaaattttacaaagaaaat 29349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 18846794 - 18846725
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatga 152  Q
    ||||| |||||||||||||||||| ||  ||| ||||||| |||||| ||||||||| |||| |||||||    
T  18846794 gagttatgttatttgaacatccatttagatgacaatttttatgacaatcaaaattttgcaaaaaaaatga 18846725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 19108993 - 19109066
Alignment:
Q  95 ttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||| ||||||||||| || |||||||||||| ||  |||| ||||| |||||| |||||| ||||||||    
T  19108993 ttgaacattcatatatgtgacaacttttgtgacaacaaattttttgcaaaggaaatgaagtagtggcacaaaaa 19109066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 14255487 - 14255399
Alignment:
Q  82 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||| ||||||||||||||| |||| |||| || || ||||| |||||||| || |||||||||||||  ||||| | ||||| |||||    
T  14255487 tgaggtgtgttatttgaacaaccatttatgcgacaacttttgggacaaccataaatttacaaagaaaagtaggtattaacacataaacc 14255399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 32701275 - 32701207
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaa 149  Q
    ||||||||||||||||||||| |||| ||| |||||| ||||| | |||||| || |||||||| ||||    
T  32701275 atgagttgtgttatttgaacaaccatttatatgataacttttggggcaaccataagtttacaaaaaaaa 32701207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 33273505 - 33273561
Alignment:
Q  113 gataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||||||||   ||||||||||||||| |||||||||||| || ||||||||||||    
T  33273505 gataattttttaaacaaccaaaattttataaagaaaatgagatattgacacaaaaac 33273561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 44287369 - 44287417
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||| ||||    
T  44287369 tgtgacaaccaaaattttacaaaggaaatgaggttgtggcacaataacc 44287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 114
Target Start/End: Complemental strand, 22416384 - 22416353
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtga 114  Q
    ||||||||||||||||||||||||||||||||    
T  22416384 gagttgtgttatttgaacatccatatatgtga 22416353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 39147951 - 39147864
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||| ||||||||||||||| |||| |   ||| || ||||| ||||| || || |||||||| ||||||||||| |||||||||||    
T  39147951 atgagatgtgttatttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaaaaatgaggtattgacacaaaaa 39147864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 44977387 - 44977474
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||||||||||||| |||| |    || || || || |||||||| || ||||||||||||||| |||| |||||||||||||    
T  44977387 gagttgtgttatttgaacaaccatttgaacgaaaacttatgagacaaccataaatttacaaagaaaatggggtattgacacaaaaacc 44977474  T

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Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 7502334 - 7502383
Alignment:
Q  119 ttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    ||||| |||||||| ||||||| |||||||| |||||| |||||||||||    
T  7502334 ttttgggacaaccataattttataaagaaaaagaggtattgacacaaaaa 7502383  T

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Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 31415095 - 31415006
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||||| |||||||||||  ||| |   |||||| ||||| |||||||| ||||||| |||||||  ||| || |||||||||||||    
T  31415095 atgagttgtattatttgaacaatcattttattgataacttttgagacaaccataattttaaaaagaaagagagatattgacacaaaaacc 31415006  T

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Target: scaffold0199 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 8858 - 8764
Alignment:
Q  76 aaaaaatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||| |||||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8858 aaaaaaagagttgtgttatttgaacatccatatatctgacaacttttatgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 8764  T

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Target: scaffold0098 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 49480 - 49391
Alignment:
Q  81 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  49480 atgagttatgttatttgaacatccatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 49391  T

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Target: scaffold0056 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 76507 - 76594
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  76507 gagttgtgttattttaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacc 76594  T

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Target: scaffold0519 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 11965 - 11878
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    ||||||| ||||||||||||| ||| || ||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  11965 gagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaacc 11878  T

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Target: scaffold0087 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 53246 - 53335
Alignment:
Q  80 aatgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    |||||||||||||||||||||||  || ||| |||||| ||||  ||||||||||| |||| |||||||||||| || ||||||||||||    
T  53246 aatgagttgtgttatttgaacatttatttatatgataagtttttagacaaccaaaaatttataaagaaaatgagatattgacacaaaaac 53335  T

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Target: scaffold0067 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 35667 - 35619
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaacc 170  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35667 tgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaacc 35619  T

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Target: scaffold0148 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 20789 - 20856
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaat 150  Q
    |||||||||||||||||||||||| ||  ||||||||||||||| || ||||||||| ||| ||||||    
T  20789 gagttgtgttatttgaacatccatttaaatgataatttttgtgataatcaaaattttgcaaggaaaat 20856  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 10890 - 10936
Alignment:
Q  122 tgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 168  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||    
T  10890 tgtgacaatcaaaattttataaagaaaatgaggtagtaacacaaaaa 10936  T

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Target: scaffold0184 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 16677 - 16762
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||| |||||||||||||||||| ||| ||| || ||||  ||||| ||| |||| ||||||||||||||||| ||  ||||||||    
T  16677 gagttctgttatttgaacatccatttatatgacaacttttaagacaatcaacattt-acaaagaaaatgaggtattggtacaaaaac 16762  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 56167 - 56082
Alignment:
Q  83 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaac 169  Q
    ||||| |||||||||||||||||| ||| ||| || ||||  ||||| ||| |||| ||||||||||||||||| ||  ||||||||    
T  56167 gagttctgttatttgaacatccatttatatgacaacttttaagacaatcaacattt-acaaagaaaatgaggtattggtacaaaaac 56082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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