View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15024_high_45 (Length: 266)
Name: NF15024_high_45
Description: NF15024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15024_high_45 |
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Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 47716212 - 47715977
Alignment:
| Q |
12 |
agagatatcagagaaagtaacgaaaccgaaacctctagggattcgggtggtgcggtcaaaagagatggtggagtgcaaaacgtcaccgtatttggtgaaa |
111 |
Q |
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| T |
47716212 |
agagatatcagagaaagtaacgaaaccgaaacctctagggattcgggtggtgcggtcaaaagagatggtggagtgcaaaacgtcaccgtatttggtgaaa |
47716113 |
T |
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| Q |
112 |
tggtgtttgagagtgtcttcagtggtttcgcgagaaatgccacctacgaagagcttggctttatcagaatccattttgaaattcatggtactgtagatga |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47716112 |
tggtgtttgagagtgtcttcagtggtttcgcgagaaatgccacctacgaagagcttggctttatcagaatccattttgaaattcatggtactgtagatga |
47716013 |
T |
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| Q |
212 |
aaccctaaatccccaaatcaattggaaacccttact |
247 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
47716012 |
aaccctaaatccccaaatcaattggaaacccttact |
47715977 |
T |
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