View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15024_high_53 (Length: 237)
Name: NF15024_high_53
Description: NF15024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15024_high_53 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7615970 - 7616194
Alignment:
| Q |
1 |
tttagatttttctagtcatatgaactagaatattctttgtctctagct---tttcttgtaatctattacttgcatttttcatgtcaatacttacactttt |
97 |
Q |
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|||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7615970 |
tttagatttttctaatcatatgaactagaatattcttcgtctctagctaattttcttgtaatctattacttgcatttttcatgtcaatacttacactttt |
7616069 |
T |
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| Q |
98 |
atgaaggatgaagtttaaaataagttagcattctggcacccaatgaatttaatgaagaaaaaaggaatccaaaccactagtatctttggttgcaaaggag |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7616070 |
atgaaggatgaagtttaaaataagttagcattctggcacccaataaatttaatgaagaaaaaaggaatccaaaccactagtatctttggttgcaaaggag |
7616169 |
T |
|
| Q |
198 |
caactcaagttgacaacatggttat |
222 |
Q |
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||||||||||||||||||||||||| |
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| T |
7616170 |
caactcaagttgacaacatggttat |
7616194 |
T |
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