View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15024_high_60 (Length: 202)
Name: NF15024_high_60
Description: NF15024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15024_high_60 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 49631489 - 49631674
Alignment:
| Q |
1 |
tttctccctttacagatttgaaggaagcaatattattacatttcctgtacagattttggtataagtttggtttgttttatttcctttcatgaaatgctgg |
100 |
Q |
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| T |
49631489 |
tttctccctttacagatttgaaggaagcaatattattacatttcctgtacagattttggtataagtttgatttgttttatttcctttcatgaaatgctgg |
49631588 |
T |
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| Q |
101 |
tgcttttttcttcctctcccgttcttttctgggtggaggaccggcatttctcttgagaattagaaatagactttcaacttgatccc |
186 |
Q |
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||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49631589 |
tgcttttttcttcctctaccgtccttttctgggtggaggaccggcatttctcttgagaattagaaatagactttcaacttgatccc |
49631674 |
T |
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