View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15025_high_18 (Length: 432)
Name: NF15025_high_18
Description: NF15025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15025_high_18 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37573016 - 37573093
Alignment:
| Q |
1 |
aggttgcatgaaaatgttatgtgatgagactatatatagtactagtgct-cgtgtattcatcatttgaaaatgttaac |
77 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
37573016 |
aggttgcatgaaaatgttatgtgatgagactatatatagtactagtgctacgtgtattcatcatttgaaaatgttaac |
37573093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 37573135 - 37573164
Alignment:
| Q |
88 |
tattataagcatatcatcacacacatacat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37573135 |
tattataagcatatcatcacacacatacat |
37573164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University