View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15025_high_53 (Length: 251)

Name: NF15025_high_53
Description: NF15025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15025_high_53
NF15025_high_53
[»] chr7 (35 HSPs)
chr7 (11-242)||(5615693-5615924)
chr7 (11-242)||(31824362-31824593)
chr7 (11-242)||(13285982-13286213)
chr7 (11-195)||(25441775-25441959)
chr7 (11-242)||(41027183-41027415)
chr7 (11-242)||(12827556-12827788)
chr7 (11-242)||(42594996-42595228)
chr7 (11-242)||(15988866-15989098)
chr7 (34-227)||(40701581-40701775)
chr7 (11-167)||(33090908-33091065)
chr7 (11-161)||(26348338-26348481)
chr7 (11-161)||(26363373-26363516)
chr7 (11-161)||(5382004-5382147)
chr7 (11-161)||(5391642-5391785)
chr7 (11-161)||(5926865-5927008)
chr7 (11-161)||(6544535-6544678)
chr7 (11-161)||(8500779-8500922)
chr7 (11-161)||(8511249-8511392)
chr7 (11-161)||(46496844-46496987)
chr7 (11-161)||(46507456-46507599)
chr7 (11-100)||(9535429-9535518)
chr7 (11-100)||(9545712-9545801)
chr7 (11-100)||(16132103-16132192)
chr7 (11-100)||(16142652-16142741)
chr7 (11-161)||(32098110-32098253)
chr7 (11-161)||(32108547-32108690)
chr7 (12-161)||(43983207-43983349)
chr7 (11-100)||(6534290-6534379)
chr7 (13-212)||(9006586-9006776)
chr7 (11-161)||(11626553-11626696)
chr7 (11-100)||(44897101-44897190)
chr7 (11-100)||(44907504-44907593)
chr7 (11-74)||(42620989-42621052)
chr7 (11-60)||(14944131-14944180)
chr7 (11-60)||(15371724-15371773)
[»] chr4 (32 HSPs)
chr4 (11-242)||(522415-522646)
chr4 (11-242)||(17421519-17421750)
chr4 (11-242)||(26457988-26458219)
chr4 (11-242)||(30651203-30651432)
chr4 (11-242)||(16057867-16058115)
chr4 (11-211)||(41525532-41525730)
chr4 (11-161)||(5293284-5293427)
chr4 (11-161)||(5302943-5303086)
chr4 (11-161)||(16249176-16249319)
chr4 (11-161)||(27680947-27681090)
chr4 (11-161)||(27690602-27690745)
chr4 (11-161)||(6691948-6692091)
chr4 (11-161)||(6702354-6702497)
chr4 (11-161)||(21845833-21845976)
chr4 (11-161)||(21855425-21855568)
chr4 (11-161)||(21901696-21901839)
chr4 (11-161)||(21911288-21911431)
chr4 (11-161)||(40921573-40921716)
chr4 (11-161)||(16253142-16253285)
chr4 (11-100)||(17985060-17985149)
chr4 (11-100)||(18105611-18105700)
chr4 (11-100)||(3487818-3487907)
chr4 (11-100)||(3497141-3497230)
chr4 (11-60)||(6406019-6406068)
chr4 (11-161)||(15668917-15669060)
chr4 (11-114)||(14600899-14601002)
chr4 (11-74)||(16241871-16241934)
chr4 (11-161)||(13403232-13403375)
chr4 (11-60)||(13793255-13793304)
chr4 (11-60)||(26331049-26331098)
chr4 (11-60)||(52498955-52499004)
chr4 (14-58)||(1293182-1293225)
[»] chr1 (21 HSPs)
chr1 (11-242)||(1974902-1975133)
chr1 (9-242)||(1982266-1982499)
chr1 (11-242)||(1989686-1989917)
chr1 (11-242)||(41208168-41208400)
chr1 (11-215)||(52955486-52955689)
chr1 (91-213)||(13403943-13404065)
chr1 (11-212)||(34822706-34822898)
chr1 (11-161)||(16154613-16154756)
chr1 (11-161)||(25019198-25019341)
chr1 (11-161)||(1186608-1186750)
chr1 (85-213)||(19868880-19869008)
chr1 (11-161)||(21458358-21458501)
chr1 (11-155)||(22956292-22956428)
chr1 (11-161)||(21886043-21886186)
chr1 (106-212)||(30210492-30210597)
chr1 (125-212)||(18062516-18062600)
chr1 (11-74)||(2115810-2115873)
chr1 (11-74)||(30549793-30549856)
chr1 (11-60)||(8540075-8540124)
chr1 (125-212)||(21782371-21782455)
chr1 (11-60)||(41544298-41544347)
[»] scaffold0764 (1 HSPs)
scaffold0764 (11-242)||(997-1228)
[»] scaffold0313 (2 HSPs)
scaffold0313 (11-242)||(5381-5612)
scaffold0313 (11-242)||(19538-19769)
[»] chr8 (15 HSPs)
chr8 (11-242)||(14437015-14437246)
chr8 (11-242)||(26362557-26362788)
chr8 (34-213)||(18536262-18536441)
chr8 (41-234)||(12841725-12841919)
chr8 (11-208)||(37295552-37295749)
chr8 (11-212)||(5867578-5867770)
chr8 (11-161)||(21988126-21988269)
chr8 (11-161)||(21997660-21997803)
chr8 (11-161)||(9325222-9325365)
chr8 (11-161)||(21203000-21203143)
chr8 (11-161)||(21213416-21213559)
chr8 (11-161)||(21334028-21334171)
chr8 (11-161)||(791466-791609)
chr8 (11-74)||(37816670-37816733)
chr8 (145-212)||(20098494-20098559)
[»] chr6 (21 HSPs)
chr6 (11-242)||(34764969-34765200)
chr6 (11-242)||(22223788-22224020)
chr6 (11-242)||(22249623-22249855)
chr6 (11-242)||(8563438-8563670)
chr6 (47-242)||(24370554-24370749)
chr6 (11-186)||(9761643-9761817)
chr6 (11-161)||(20912012-20912155)
chr6 (11-100)||(24922188-24922277)
chr6 (11-100)||(24931224-24931313)
chr6 (12-161)||(31357290-31357432)
chr6 (12-161)||(31367018-31367160)
chr6 (9-161)||(16897676-16897821)
chr6 (9-161)||(16908329-16908474)
chr6 (11-161)||(12454783-12454926)
chr6 (11-161)||(3285575-3285718)
chr6 (11-212)||(27787756-27787948)
chr6 (11-161)||(14791333-14791476)
chr6 (12-100)||(18159845-18159933)
chr6 (12-100)||(18169657-18169745)
chr6 (11-51)||(24361891-24361931)
chr6 (34-71)||(28092396-28092433)
[»] chr2 (24 HSPs)
chr2 (11-242)||(27160129-27160360)
chr2 (11-242)||(27170498-27170729)
chr2 (11-242)||(22901725-22901957)
chr2 (11-227)||(22908981-22909198)
chr2 (11-242)||(19341934-19342154)
chr2 (11-237)||(23721565-23721784)
chr2 (13-213)||(40409231-40409430)
chr2 (144-242)||(15475617-15475716)
chr2 (11-161)||(2998803-2998946)
chr2 (11-161)||(4457925-4458068)
chr2 (11-161)||(4467550-4467693)
chr2 (11-161)||(17488420-17488563)
chr2 (11-161)||(45014462-45014605)
chr2 (11-161)||(45024539-45024682)
chr2 (11-161)||(18650948-18651091)
chr2 (11-161)||(18663066-18663209)
chr2 (12-161)||(5337242-5337384)
chr2 (12-161)||(5347095-5347237)
chr2 (11-100)||(9502867-9502956)
chr2 (11-100)||(9514233-9514322)
chr2 (106-171)||(16135423-16135489)
chr2 (11-161)||(24696691-24696834)
chr2 (11-60)||(29423189-29423238)
chr2 (125-161)||(72429-72465)
[»] chr5 (21 HSPs)
chr5 (11-242)||(20947433-20947664)
chr5 (11-242)||(20957822-20958053)
chr5 (11-242)||(19548666-19548898)
chr5 (11-242)||(36316001-36316233)
chr5 (11-161)||(27411878-27412021)
chr5 (11-161)||(32070170-32070313)
chr5 (11-161)||(18361007-18361150)
chr5 (11-161)||(21753173-21753316)
chr5 (11-161)||(21762460-21762603)
chr5 (11-161)||(26192189-26192332)
chr5 (11-161)||(26202793-26202936)
chr5 (11-161)||(33939047-33939190)
chr5 (11-161)||(33949447-33949590)
chr5 (34-161)||(18389964-18390084)
chr5 (11-100)||(8765553-8765642)
chr5 (11-100)||(11411297-11411386)
chr5 (11-212)||(21484223-21484414)
chr5 (135-212)||(31105093-31105168)
chr5 (11-60)||(22244538-22244587)
chr5 (11-60)||(23378771-23378820)
chr5 (11-60)||(31105236-31105285)
[»] chr3 (23 HSPs)
chr3 (11-242)||(49387571-49387802)
chr3 (11-242)||(24873455-24873687)
chr3 (11-219)||(24793114-24793322)
chr3 (14-219)||(17733773-17733980)
chr3 (14-219)||(19035042-19035249)
chr3 (14-242)||(21542479-21542707)
chr3 (34-132)||(29709504-29709602)
chr3 (11-100)||(6422086-6422175)
chr3 (11-161)||(1685446-1685589)
chr3 (11-161)||(5655821-5655964)
chr3 (83-133)||(8435868-8435918)
chr3 (83-133)||(8439413-8439463)
chr3 (11-161)||(8972576-8972719)
chr3 (11-161)||(8983131-8983274)
chr3 (11-161)||(9536865-9537008)
chr3 (11-161)||(9547191-9547334)
chr3 (11-100)||(6432526-6432615)
chr3 (64-142)||(11044673-11044751)
chr3 (11-161)||(12182-12325)
chr3 (11-100)||(4371161-4371250)
chr3 (11-100)||(4380880-4380969)
chr3 (11-74)||(16335636-16335699)
chr3 (11-60)||(55478238-55478287)
[»] scaffold0535 (1 HSPs)
scaffold0535 (11-242)||(1117-1349)
[»] scaffold0811 (1 HSPs)
scaffold0811 (11-242)||(3728-3960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (80-242)||(1237-1399)
[»] scaffold0059 (1 HSPs)
scaffold0059 (64-242)||(40842-41021)
[»] scaffold0004 (1 HSPs)
scaffold0004 (11-220)||(241880-242089)
[»] scaffold0009 (1 HSPs)
scaffold0009 (135-219)||(267239-267322)
[»] scaffold0277 (1 HSPs)
scaffold0277 (11-100)||(19571-19660)
[»] scaffold0254 (1 HSPs)
scaffold0254 (11-161)||(8038-8181)
[»] scaffold0014 (1 HSPs)
scaffold0014 (11-161)||(234184-234327)
[»] scaffold0611 (1 HSPs)
scaffold0611 (11-161)||(8100-8243)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-161)||(93048-93191)
[»] scaffold0142 (1 HSPs)
scaffold0142 (82-210)||(29027-29145)
[»] scaffold0015 (1 HSPs)
scaffold0015 (11-155)||(198888-199024)
[»] scaffold0072 (1 HSPs)
scaffold0072 (64-161)||(28630-28727)
[»] scaffold0057 (1 HSPs)
scaffold0057 (82-209)||(65370-65488)
[»] scaffold0106 (1 HSPs)
scaffold0106 (11-60)||(17482-17531)
[»] scaffold0005 (2 HSPs)
scaffold0005 (11-114)||(216376-216479)
scaffold0005 (11-74)||(310214-310277)
[»] scaffold0234 (1 HSPs)
scaffold0234 (11-74)||(21351-21414)
[»] scaffold0065 (1 HSPs)
scaffold0065 (11-74)||(15658-15721)
[»] scaffold0047 (1 HSPs)
scaffold0047 (11-69)||(74913-74971)
[»] scaffold0406 (1 HSPs)
scaffold0406 (125-212)||(15062-15146)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-60)||(13645-13694)
[»] scaffold0081 (1 HSPs)
scaffold0081 (34-62)||(13146-13174)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 5615693 - 5615924
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5615693 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 5615792  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5615793 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 5615892  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    |||||||||||||||||||| |||||||||||    
T  5615893 tcttagtcatgtacttttcttggctttcattt 5615924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 31824593 - 31824362
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31824593 atgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 31824494  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31824493 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 31824394  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||||||||||||||||||||||||||||||||    
T  31824393 tcttagtcatgtacttttctgggctttcattt 31824362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 13285982 - 13286213
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13285982 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 13286081  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13286082 attcctaatgttttgtacttcaaatgttcatagtattgaatgaacattgaagatgccccttttgactttaatcaaataaatgcctttattccttgattga 13286181  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||||||||||||||||||||||||||| ||||    
T  13286182 tcttagtcatgtacttttctgggcttttattt 13286213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 25441959 - 25441775
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25441959 atgatttgtaagacttgtaattaatataatcaaatcctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatgatattcttaatggaat 25441860  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgctt 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25441859 attcctaatgtcttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgctt 25441775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 41027415 - 41027183
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41027415 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaatatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 41027316  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  41027315 attcctaatgttttgtacttcaaatgttcatagttttgaatgaacattgaagatgccccttttgactttaatcaaataaatgtctttattccttgattga 41027216  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  41027215 tcttagtcaatgtactttactgggcttttattt 41027183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 12827556 - 12827788
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  12827556 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcaacatggaaaacatctaggatgatattcttaatggaat 12827655  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  12827656 attcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgcatttattgcttgattga 12827755  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    ||||| || ||||||||| || |||||| ||||    
T  12827756 tcttattcaatgtactttactaggcttttattt 12827788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 42595228 - 42594996
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  42595228 atgatttgtaagactcttaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagtatggaaaacatctaggatgatattcttaatggaat 42595129  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||    
T  42595128 attcttaattttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgactga 42595029  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||| ||||| ||||||||| ||||    
T  42595028 tcttagtcaatgcactttactgggcttttattt 42594996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 15988866 - 15989098
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  15988866 atgatttgtaagactgttatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcagcatggaaaacatctaggatgatattcttgatggaat 15988965  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15988966 attcctaatgttttgtacttcaaatattcatagtcttgaatgaatattgaagatgccccttttgactttaatcaaataaatgcctttattccttgattga 15989065  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| || |||||| ||||||||| ||||    
T  15989066 tcttagtcaatatactttactgggcttttattt 15989098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 40701775 - 40701581
Alignment:
Q  34 atgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaa 133  Q
    ||||||||||||||||||| ||||||||   ||||||||||  || | ||||||||| ||||||||||| |||||||||||||||| ||||| ||||||     
T  40701775 atgtaatcaaatcctaataatgaaacatcattgaagtgcagtgtgtataacatctagaatgatattcttgatggaatattcctaatattttgcacttcat 40701676  T
Q  134 ttgttcat-agtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttt 227  Q
    | |||||| | |||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40701675 tcgttcataaatcttgaatgaacactgaagatg-tctttttgactttaatcaaataaatgcttttattccttgattgatctaagtcaatgtacttt 40701581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 33091065 - 33090908
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||||| ||||||||||| ||    ||||||||||||||||||||| || ||||    
T  33091065 atgatttgtaagactctcatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcagtatatgtaacatctaggatgatattcttgatagaat 33090966  T
Q  111 attcctaatgttttgtacttcaattgttca-tagtcttaaatgaacattgaagatgcc 167  Q
    |||  |||||||||||||||||| |||||| |||||||||||||||| | ||||||||    
T  33090965 atttataatgttttgtacttcaaatgttcattagtcttaaatgaacaataaagatgcc 33090908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 26348338 - 26348481
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  26348338 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 26348437  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  26348438 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 26348481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 26363373 - 26363516
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  26363373 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 26363472  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  26363473 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 26363516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 5382004 - 5382147
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  5382004 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 5382102  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5382103 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5382147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 5391642 - 5391785
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  5391642 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 5391740  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5391741 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5391785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 5927008 - 5926865
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  5927008 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 5926910  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5926909 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5926865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6544678 - 6544535
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  6544678 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 6544580  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  6544579 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 6544535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8500922 - 8500779
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  8500922 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 8500824  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  8500823 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 8500779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8511392 - 8511249
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  8511392 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 8511294  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  8511293 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 8511249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 46496987 - 46496844
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  46496987 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 46496889  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  46496888 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 46496844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 46507599 - 46507456
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  46507599 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 46507501  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  46507500 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 46507456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9535429 - 9535518
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||||    
T  9535429 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattc 9535518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9545712 - 9545801
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||||    
T  9545712 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattc 9545801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 16132103 - 16132192
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||||    
T  16132103 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattc 16132192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 16142652 - 16142741
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||||    
T  16142652 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattc 16142741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 32098253 - 32098110
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||| ||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  32098253 atgatttgtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 32098154  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  32098153 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 32098110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 32108690 - 32108547
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||| ||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  32108690 atgatttgtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 32108591  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  32108590 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 32108547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 43983349 - 43983207
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || ||    
T  43983349 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaaa 43983251  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  43983250 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 43983207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 6534379 - 6534290
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  6534379 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 6534290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 9006776 - 9006586
Alignment:
Q  13 gatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatat 112  Q
    |||||||||||||   | || |||||||||||||||||||||||||||   |||||| | ||       ||||||||||||||||||||   ||||||||    
T  9006776 gatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagaagtgattgcaacatctaggatgatattctctttggaatat 9006677  T
Q  113 tcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    | |||       ||| ||||| ||||||||||||| ||||||||||||| ||  |||||||||| ||||||   ||||| | |||||| |||||||||||    
T  9006676 ttcta-------gtatttcaagtgttcatagtcttgaatgaacattgaatat--cctttttgacattaatcttgtaaatacctttattgcttgattgatc 9006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 11626553 - 11626696
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||| ||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  11626553 atgatttgtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 11626651  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  11626652 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 11626696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 44897190 - 44897101
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  44897190 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 44897101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 44907593 - 44907504
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  44907593 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 44907504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 42621052 - 42620989
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  42621052 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 42620989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 14944180 - 14944131
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  14944180 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 14944131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 15371773 - 15371724
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  15371773 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 15371724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 522415 - 522646
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  522415 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 522514  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  522515 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 522614  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  522615 tctcagtcatgtacttttctgggctttcattt 522646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 17421519 - 17421750
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17421519 atgatttgtaagacttgtaattgatgtaatcaattcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 17421618  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17421619 attcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatggttttattccttgattga 17421718  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    |||||||||||||||||||| |||||||||||    
T  17421719 tcttagtcatgtacttttctaggctttcattt 17421750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 26458219 - 26457988
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  26458219 atgatttgtaagactcttatttgatgtaatcaactcctaatagtgaaacatttatgaagtgctgcatggaaaacatctaggatgatattcttaatggaat 26458120  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| |||||    
T  26458119 attcctaatgttttgtacttcaaatgttcatagtcttggatgaacattgaagatgctctttttaaatttaatcaaataaatgcctttattccttaattga 26458020  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    |||||||||||||||||| || ||||| ||||    
T  26458019 tcttagtcatgtacttttatgagcttttattt 26457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 30651432 - 30651203
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||||| ||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  30651432 atgatttgtaagactcttatttgatgtaatcaaattctaatagaggaacattgatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 30651333  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
       || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30651332 ---cccaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgcgtttattccttgattga 30651236  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  30651235 tcttagtcaatgtactttactgggcttttattt 30651203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 16058115 - 16057867
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||| |  || || |||||||||||||||||||||| |||||| |||||   ||||||| |||||||||||||||||||||||||||||||    
T  16058115 atgatttgtaagattcttatttgatgtaatcaaatcctaatagtggaacattgatgaaaaacagcatggaaaacatctaggatgatattcttaatggaat 16058016  T
Q  111 attcctaatgttttgtacttcaattgttcatag----------------tcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgct 194  Q
    ||||| ||| ||||||||||||| |||||||||                |||| |||||||||||||||||||||||||||||||||||||||||||||     
T  16058015 attcccaatattttgtacttcaaatgttcatagtcttgaatgaacatagtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgcc 16057916  T
Q  195 tttattccttgattgatcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| ||||    
T  16057915 tttattccttgattgatcctagtcaatgtactttactgggcttttattt 16057867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 41525730 - 41525532
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||| |  | || ||||||| ||||||||||||| ||||||  |||||||||| |||| | ||||| || |||||||||||||  |||||    
T  41525730 atgatttgtaagacatccatttgatgtaattaaatcctaatagtaaaacataaatgaagtgcatcatgtataacatttaagatgatattcttataggaat 41525631  T
Q  111 attcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaat-caaataaatgcttttattccttgatt 208  Q
    |||||||||  |||||| ||||||||||||| |||||| |||| ||| |||| ||||   |||||||||| || ||||||||||  |||| |||||||||    
T  41525630 attcctaat-atttgtaattcaattgttcataagtctttaatgtacaatgaatatgc---ttttgacttttatccaaataaatgtctttaatccttgatt 41525535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 5293284 - 5293427
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  5293284 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 5293383  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5293384 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5293427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 5302943 - 5303086
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  5302943 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 5303042  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5303043 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5303086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 16249319 - 16249176
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  16249319 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 16249220  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  16249219 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 16249176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 27680947 - 27681090
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  27680947 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 27681046  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  27681047 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 27681090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 27690602 - 27690745
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  27690602 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 27690701  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  27690702 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 27690745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6692091 - 6691948
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  6692091 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 6691993  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  6691992 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 6691948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6702497 - 6702354
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  6702497 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 6702399  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  6702398 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 6702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21845976 - 21845833
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21845976 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21845878  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21845877 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21845833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21855568 - 21855425
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21855568 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21855470  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21855469 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21855425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21901839 - 21901696
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21901839 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21901741  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21901740 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21901696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21911431 - 21911288
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21911431 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21911333  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21911332 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21911288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 40921716 - 40921573
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  40921716 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 40921618  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  40921617 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 40921573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 16253285 - 16253142
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||| |     |||||||||||||||||| | |  |||||    
T  16253285 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtaattttaacatctaggatgatattcccttgtggaa 16253186  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  16253185 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 16253142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 17985060 - 17985149
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||||    
T  17985060 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattc 17985149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 18105611 - 18105700
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||||    
T  18105611 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattc 18105700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 3487818 - 3487907
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    |  |||||||||||||||||||    
T  3487818 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgctattaacatctaggatgatattc 3487907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 3497141 - 3497230
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    |  |||||||||||||||||||    
T  3497141 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgctattaacatctaggatgatattc 3497230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 6406019 - 6406068
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||| || || |||||||||||| ||||||||||||||    
T  6406019 atgatttgtaagacttctatttgatgtaatcaaattctaatagtgaaaca 6406068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 15669060 - 15668917
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||       |||||||||||||||||| | |  |||||    
T  15669060 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaa 15668961  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  15668960 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 15668917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 14600899 - 14601002
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtg-aaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaa 109  Q
    ||||||||||||||||||| || |||||||| ||||||||||||| ||||||   |||||||||| |     |||||||||||||||||||  | |||||    
T  14600899 atgatttgtaagacttgtacttgatgtaatc-aatcctaatagtgaaaacataattgaagtgcagtaattgcaacatctaggatgatattcacattggaa 14600997  T
Q  110 tattc 114  Q
    |||||    
T  14600998 tattc 14601002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 16241934 - 16241871
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  16241934 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 16241871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 13403232 - 13403375
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattct-taatggaa 109  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||   ||||||  |||       |||||||||||||||||||  |  |||||    
T  13403232 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagaacagtgattttaacatctaggatgatattcccttttggaa 13403331  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||||||||| ||||||||||||||||||||||||||    
T  13403332 tattccta-------gtacttcaat-gttcatagtcttaaatgaacattgaa 13403375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 13793255 - 13793304
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  13793255 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 13793304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 26331098 - 26331049
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  26331098 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 26331049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 52499004 - 52498955
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  52499004 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 52498955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 1293225 - 1293182
Alignment:
Q  14 atttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaa 58  Q
    |||||||||||||||| || |||||||| ||||||||||||||||    
T  1293225 atttgtaagacttgtacttgatgtaatc-aatcctaatagtgaaa 1293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 1974902 - 1975133
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1974902 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 1975001  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1975002 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 1975101  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  1975102 tctcagtcatgtacttttctgggctttcattt 1975133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 9 - 242
Target Start/End: Original strand, 1982266 - 1982499
Alignment:
Q  9 gaatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatgga 108  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1982266 gaatgatttgtaagacttgtatttgatgtaatcaaatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatgatattcttaatgga 1982365  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgatt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1982366 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgatt 1982465  T
Q  209 gatcttagtcatgtacttttctgggctttcattt 242  Q
    ||||||||||||||||||||||||||||||||||    
T  1982466 gatcttagtcatgtacttttctgggctttcattt 1982499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 1989686 - 1989917
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1989686 atgatttgtaagacttgtatttgatgtaatcaaatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 1989785  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1989786 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 1989885  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||||||||||||||||||||||||||||||||    
T  1989886 tcttagtcatgtacttttctgggctttcattt 1989917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 41208400 - 41208168
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41208400 atgatttgtaagacttgtaatttatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 41208301  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  41208300 attcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgccctttttgactttaattaaataaatgcctttatttcttgattga 41208201  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  41208200 tcttagtcaatgtactttactgggcttttattt 41208168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 52955486 - 52955689
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  52955486 atgatttgtaagactcttatttgatgtaatcaaattctaatagtgaaacatttatgaagtgcagcgtggaaaacatctaggatgatattcttaatggaat 52955585  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||| || || |||||||||||||||||||||||||||| |||||| |||||||||    
T  52955586 attcctaatgttttgtacttcaaatattcatagtcttgaatgaacattaaatataccctttttgactttaatcaaataaatgcctttatt-cttgattga 52955684  T
Q  211 tctta 215  Q
    |||||    
T  52955685 tctta 52955689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 13403943 - 13404065
Alignment:
Q  91 gatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaat-caaata 188  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||| || ||  |||||||||| || ||||||    
T  13403943 gatgatattcttataggagtattcctaatgttttgtacttcaattgttcataagtctttaatgaacaatgaatattcc--ttttgacttttatccaaata 13404040  T
Q  189 aatgcttttattccttgattgatct 213  Q
    ||||| |||| ||||||||||||||    
T  13404041 aatgcctttaatccttgattgatct 13404065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 212
Target Start/End: Complemental strand, 34822898 - 34822706
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||   |||||||||||  |    ||||||||| ||||||||||   | ||||    
T  34822898 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaacaatgaagtgcagtgtttgtaacatctagtatgatattctctttagaat 34822799  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||||||       ||||||||| |||||||||||||||||||||| |||||||  | |||||||| ||||||   ||||| | |||||| |||||||||    
T  34822798 attccta-------gtacttcaaatgttcatagtcttaaatgaacaatgaagat--cttttttgacattaatcttgtaaattcctttattgcttgattga 34822708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 16154756 - 16154613
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  16154756 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 16154657  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  16154656 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 16154613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 25019341 - 25019198
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| | |  || ||    
T  25019341 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattcccttgtgaaa 25019242  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       ||||||||| |||||||||||||||||||||||||||    
T  25019241 tattccta-------gtacttcaa-tgttcatagtcttaaatgaacattgaa 25019198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 1186608 - 1186750
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||||||  | || |||||||||||||||||||||||||||   |||||| ||||       ||||||||||||||||||||   ||||||    
T  1186608 atgatttgtaagacttccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagagattgtaacatctaggatgatattctctttggaat 1186707  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||| |||       ||||||||| |||||||||||||||||||||||||||    
T  1186708 atttcta-------gtacttcaa-tgttcatagtcttaaatgaacattgaa 1186750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 19868880 - 19869008
Alignment:
Q  85 atctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaat- 182  Q
    |||||||||||||||||||  |||||||||||| || |||||| |||| |||||||| |||||| |||||||| |||| |||   ||||||||||| ||     
T  19868880 atctaggatgatattcttagaggaatattcctattg-tttgtaattcatttgttcataagtctttaatgaacaatgaatatg-tttttttgacttttatc 19868977  T
Q  183 caaataaatgcttttattccttgattgatct 213  Q
    ||||||| ||  |||| ||||||||||||||    
T  19868978 caaataagtgtctttaatccttgattgatct 19869008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21458501 - 21458358
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21458501 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21458403  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21458402 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21458358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 22956428 - 22956292
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaa-catttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaa 109  Q
    ||||||||||||||||||| || |||||| ||| |||||||||||||| |||   ||||||||||       |||||||||||||||||||||| |||||    
T  22956428 atgatttgtaagacttgtatttgatgtaaacaa-tcctaatagtgaaaacataactgaagtgcagtgattgcaacatctaggatgatattcttattggaa 22956330  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaac 155  Q
    |||||       || ||||||||| |||||||||||||||||||||    
T  22956329 tattc-------ttagtacttcaa-tgttcatagtcttaaatgaac 22956292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21886186 - 21886043
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||       |||||||||||||||||| | |  |||||    
T  21886186 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaa 21886087  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21886086 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21886043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 30210597 - 30210492
Alignment:
Q  106 ggaatattcctaatgttttgtacttcaattgttcata-gtcttaaatgaacattgaagatgccctttttgactttaatc-aaataaatgcttttattcct 203  Q
    |||||||||||||||||| |||||||| |||||| || ||||| |||||||| |||| ||||   |||||||||| ||| |||||||||  |||| ||||    
T  30210597 ggaatattcctaatgttt-gtacttcatttgttcgtaagtctttaatgaacaatgaatatgca--ttttgacttttatccaaataaatgtctttaatcct 30210501  T
Q  204 tgattgatc 212  Q
    |||||||||    
T  30210500 tgattgatc 30210492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 18062516 - 18062600
Alignment:
Q  125 gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    |||||||||| |||||||||||||||||||||||||| ||  |||||||||| |||| |  |||||||  |||||| ||| |||||||    
T  18062516 gtacttcaat-gttcatagtcttaaatgaacattgaatat--cctttttgacattaaccttataaatgtctttattgcttcattgatc 18062600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 2115873 - 2115810
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  2115873 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 2115810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 30549793 - 30549856
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  30549793 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 30549856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 8540124 - 8540075
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  8540124 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 8540075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 21782455 - 21782371
Alignment:
Q  125 gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    ||||||||| |||| |||||||| ||||||| |||||||   |||||||||| ||| ||   ||||||| |||||| |||||||||||    
T  21782455 gtacttcaagtgtttatagtcttgaatgaaccttgaaga---cctttttgacattattcttgtaaatgcctttattgcttgattgatc 21782371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 41544298 - 41544347
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  41544298 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 41544347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 997 - 1228
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  997 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 1096  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1097 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattga 1196  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  1197 tctcagtcatgtacttttctgggctttcattt 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 5612 - 5381
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5612 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 5513  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5512 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattga 5413  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  5412 tctcagtcatgtacttttctgggctttcattt 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 19769 - 19538
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19769 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 19670  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19669 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattga 19570  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  19569 tctcagtcatgtacttttctgggctttcattt 19538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 14437246 - 14437015
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14437246 atgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttgatggaat 14437147  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14437146 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattctttgattga 14437047  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||||||||||||||||||||||||||||||||    
T  14437046 tcttagtcatgtacttttctgggctttcattt 14437015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 26362557 - 26362788
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26362557 atgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 26362656  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| |    
T  26362657 attcctaatgttttgtacttcaaatgttcatagtcttaaatgaacattgaagatgccctttttgactttaataaaataaatgctcttattctttgattta 26362756  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    |||||||| |||||||||||||||||||||||    
T  26362757 tcttagtcttgtacttttctgggctttcattt 26362788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 34 - 213
Target Start/End: Complemental strand, 18536441 - 18536262
Alignment:
Q  34 atgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaa 133  Q
    |||||||||||| |||||||||||||||  ||||||||||  ||| | || |||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  18536441 atgtaatcaaattctaatagtgaaacatcaatgaagtgcactatgtataagatctaggatgatattcttgatggaatattcataatattttgtacttcaa 18536342  T
Q  134 ttgttcat-agtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatct 213  Q
    |||||||| |||||| ||||| ||||||||||| ||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  18536341 ttgttcataagtcttgaatgatcattgaagatg-cctttttaactttaatcaaataaatgtgtttattctttgattgatct 18536262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 41 - 234
Target Start/End: Original strand, 12841725 - 12841919
Alignment:
Q  41 caaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttca 140  Q
    |||| ||||||||||||||||| ||||||||||| ||    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  12841725 caaagcctaatagtgaaacattgatgaagtgcagtatatgtaacatctagcatgatatccttgatggaatattcctaatgttttgtacttcaaatgttca 12841824  T
Q  141 tagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggc 234  Q
    ||||||| || ||||||| |||||||||||| |||  |||||| ||||||||  |||||| |||||||||||| |||| ||||||||| ||||||    
T  12841825 tagtcttgaaggaacattcaagatgccctttatgaacttaatctaataaatgtctttatttcttgattgatctaagtcaatgtactttactgggc 12841919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 37295749 - 37295552
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||   | || || ||||||||||||||||||||||| || || |||||| |  |    ||||||||||||||||||||||||| |||    
T  37295749 atgatttgtaagactaccatttgatataatcaaatcctaatagtgaaacgttgataaagtgcggtgtatgtaacatctaggatgatattcttaatgaaat 37295650  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgatt 208  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| | |||||||  ||| |||||||||||| ||||||||||||||    
T  37295649 attcctaatgttttgtacttcaaatgtccatagtcttgaatgaacattgaagatgtcatttttgaacttactcaaataaatgcatttattccttgatt 37295552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 5867578 - 5867770
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||   | |||||||||||||||||||||||||||||||  |||||| |||   |    ||| |||||||||||||||||| ||||||    
T  5867578 atgatttgtaagactctcatttaatgtaatcaaatcctaatagtgaaacatcgatgaagggcaatgtttgtaacgtctaggatgatattcttattggaat 5867677  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||||||       ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||  | |||||| ||||||||||||||||    
T  5867678 attccta-------gtacttcaaatgttcatagtcttaaatgaacattgaagat--cctttttgactttaatcctaaaaatgcctttattccttgattga 5867768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 21988126 - 21988269
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  21988126 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacagtaatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 21988225  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21988226 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21988269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 21997660 - 21997803
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  21997660 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacagtaatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 21997759  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21997760 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21997803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 9325222 - 9325365
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  9325222 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 9325320  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  9325321 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 9325365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 21203000 - 21203143
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21203000 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21203098  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21203099 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21203143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 21213416 - 21213559
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21213416 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21213514  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21213515 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21213559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21334171 - 21334028
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21334171 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21334073  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21334072 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21334028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 791609 - 791466
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||       |||||||||||||||||| | |  |||||    
T  791609 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagagattttaacatctaggatgatattcccttgtggaa 791510  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  791509 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 37816733 - 37816670
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || |||||||||||| |||||||||||||||  |||||||||||    
T  37816733 atgatttgtaagactctcatttgatgtaatcaaattctaatagtgaaacatcaatgaagtgcag 37816670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 20098559 - 20098494
Alignment:
Q  145 cttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    ||||||||||||||||| ||  | |||||||| ||||||   |||||||||||||| |||||||||||    
T  20098559 cttaaatgaacattgaatat--cttttttgacattaatcttgtaaatgcttttattgcttgattgatc 20098494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 34765200 - 34764969
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34765200 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 34765101  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34765100 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattga 34765001  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  34765000 tctcagtcatgtacttttctgggctttcattt 34764969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 22223788 - 22224020
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22223788 atgatttgtaagacttttaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 22223887  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  22223888 attcctaattttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttaattga 22223987  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  22223988 tcttagtcaatgtactttactgggcttttattt 22224020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 22249623 - 22249855
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22249623 atgatttgtaagacttttaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 22249722  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  22249723 attcctaattttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttaattga 22249822  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  22249823 tcttagtcaatgtactttactgggcttttattt 22249855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 8563438 - 8563670
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8563438 atgatttgtaagactcttaattgatgtaatcaaatcctaatattgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 8563537  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  8563538 attcctaatgttttgtacttcaaatgttcatagtctagaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgattga 8563637  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  8563638 tcttagtcaatgtactttactgggcttttattt 8563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 47 - 242
Target Start/End: Original strand, 24370554 - 24370749
Alignment:
Q  47 ctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtct 146  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24370554 ctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcatagtct 24370653  T
Q  147 taaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcattt 242  Q
    | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24370654 tgaatgaacattgaagatgccctttttgactttaatcaaataaatgtctttattccttgattgatcttagtcatgtacttttctgggcttttattt 24370749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 9761643 - 9761817
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||| || || || ||||||||||||| ||| ||| ||||||  |||||||||||  || | ||||||||||||||||||||||  |||||    
T  9761643 atgatttgtaagatttctatttgatgtaatcaaatcttaacagtaaaacatcaatgaagtgcagtgtgtataacatctaggatgatattcttagaggaat 9761742  T
Q  111 attcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaatcaaa 186  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||  |||||||||| ||||||    
T  9761743 attcctaatgttttgtacttcaattgttcataagtctttaatgaacaatgaatatgcc--ttttgacttttatcaaa 9761817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 20912155 - 20912012
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  20912155 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 20912056  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  20912055 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 20912012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 24922188 - 24922277
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||| |  || |||||||||||||||||||    
T  24922188 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc 24922277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 24931224 - 24931313
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||| |  || |||||||||||||||||||    
T  24931224 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc 24931313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 31357432 - 31357290
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaat 110  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || |||    
T  31357432 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaat 31357333  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||       |||| |||| |||||||||||||||||||||||||||    
T  31357332 attccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 31357290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 31367160 - 31367018
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaat 110  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || |||    
T  31367160 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaat 31367061  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||       |||| |||| |||||||||||||||||||||||||||    
T  31367060 attccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 31367018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 16897821 - 16897676
Alignment:
Q  9 gaatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatgg 107  Q
    |||||||||||||||||   | || ||||||||||||||||||||||||||| | ||||||  |||    || |||||||||||||||||| |||  ||     
T  16897821 gaatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagaacagtgataataacatctaggatgatattcctttgtga 16897722  T
Q  108 aatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||||       |||| |||| |||||||||||||||||||||||||||    
T  16897721 aatattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 16897676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 16908474 - 16908329
Alignment:
Q  9 gaatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatgg 107  Q
    |||||||||||||||||   | || ||||||||||||||||||||||||||| | ||||||  |||    || |||||||||||||||||| |||  ||     
T  16908474 gaatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagaacagtgataataacatctaggatgatattcctttgtga 16908375  T
Q  108 aatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||||       |||| |||| |||||||||||||||||||||||||||    
T  16908374 aatattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 16908329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 12454926 - 12454783
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  12454926 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 12454828  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  12454827 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 12454783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 3285718 - 3285575
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgata-ttcttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||| |  |  |||||||||||||||| ||| |  || ||    
T  3285718 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaaaactaacatctaggatgatatttccttgtgaaa 3285619  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  3285618 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 3285575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 27787756 - 27787948
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattct-taatggaa 109  Q
    |||||||||||||||   | || ||||||||| |||||||||||||||||   |||||| ||||       |||||||||||||||||||  |  |||||    
T  27787756 atgatttgtaagactaccatttgatgtaatcatatcctaatagtgaaacaacaatgaagagcagtgattgtaacatctaggatgatattcccttttggaa 27787855  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattg 209  Q
    ||||||||       |||||||||| |||||||||||||||||||||||||| ||  |||||||||| |||| |   ||||||| |||||| ||||||||    
T  27787856 tattccta-------gtacttcaat-gttcatagtcttaaatgaacattgaatat--cctttttgacattaaccttgtaaatgcctttattgcttgattg 27787945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 14791476 - 14791333
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||       |||||||||||||||||| | |  |||||    
T  14791476 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaa 14791377  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  14791376 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 14791333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 18159933 - 18159845
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  18159933 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 18159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 18169745 - 18169657
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  18169745 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 18169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 24361891 - 24361931
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaat 51  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  24361891 atgatttgtaagacttttaattgatgtaatcaaatcctaat 24361931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 28092433 - 28092396
Alignment:
Q  34 atgtaatcaaatcctaatagtgaaacatttatgaagtg 71  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  28092433 atgtaatcaaatcctaatagtgaaacatcaatgaagtg 28092396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 27160129 - 27160360
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  27160129 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatctatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 27160228  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27160229 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 27160328  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  27160329 tctcagtcatgtacttttctgggctttcattt 27160360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 27170498 - 27170729
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  27170498 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatctatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 27170597  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27170598 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 27170697  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| ||||||||||||||||||||||||||||    
T  27170698 tctcagtcatgtacttttctgggctttcattt 27170729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 22901957 - 22901725
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  22901957 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatgatattcttaatggaat 22901858  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22901857 attcctaatgttttgtacttcaaatgttcataatcttaaatgaacattgaagatgccctttttgactttaatcaaataaattcatttattccttgattga 22901758  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||| ||||| ||||    
T  22901757 tcttagtcaatgtactttactgagcttttattt 22901725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 22908981 - 22909198
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22908981 atgatttgtaagactcttatttgatgtaatcaaatcctaataatgaaacatttatgaagtggagcatggaaaacatctaggatgatattcttaatggaat 22909080  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  22909081 attcctaattttttatacttcaaatgttcatagtcttgaatgaacattgaagatgccatttttgtctttaatcaaataaatgcctttattccttgattga 22909180  T
Q  211 tcttagtc-atgtacttt 227  Q
    |||||||| |||||||||    
T  22909181 tcttagtcaatgtacttt 22909198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 19342154 - 19341934
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||||| |||||||||| ||||            ||||||||||||||| ||||    
T  19342154 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcaacatg------------gatgatattcttaatagaat 19342067  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  19342066 attcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgacctttttgactttaatcaaataaatgcctttattccttgattga 19341967  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    ||| |||| ||||||||| ||||||||| ||||    
T  19341966 tctcagtcaatgtactttactgggcttttattt 19341934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 23721784 - 23721565
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||| |||| ||||   |||       ||| ||||||||||    
T  23721784 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcaacatggaaaatc-cta-------attattaatggaat 23721693  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||| ||||||| |||||||||||| ||||||||||||||||    
T  23721692 attcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgctcctttggactttagtcaaataaatgcctttattccttgattga 23721593  T
Q  211 tcttagtc-atgtacttttctgggcttt 237  Q
    |||||||| ||||||||| | |||||||    
T  23721592 tcttagtcaatgtactttacggggcttt 23721565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 40409231 - 40409430
Alignment:
Q  13 gatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatat 112  Q
    |||||||||||||   | || |||||||||||  |||||||||||||||  |||||||| || |||   ||||||||||||||||||||| |||||||||    
T  40409231 gatttgtaagactctcatttgatgtaatcaaactctaatagtgaaacatcaatgaagtgtagtatgtgtaacatctaggatgatattcttgatggaatat 40409330  T
Q  113 tcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    |||||||||||  ||||| |||||||||| ||||| |||||||||| ||||||  |||||||||||||||||||||||||  ||||||||||||||||||    
T  40409331 tcctaatgtttcctacttgaattgttcatggtcttgaatgaacattaaagatg-tctttttgactttaatcaaataaatggctttattccttgattgatc 40409429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 15475617 - 15475716
Alignment:
Q  144 tcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcattt 242  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  15475617 tcttgaatgaacattgaagatgctcattttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtacttttctggacttttattt 15475716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 2998803 - 2998946
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  2998803 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 2998902  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  2998903 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 2998946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 4458068 - 4457925
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  4458068 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 4457969  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  4457968 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 4457925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 4467693 - 4467550
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  4467693 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 4467594  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  4467593 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 4467550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 17488563 - 17488420
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgata-ttcttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||| |||||  || ||    
T  17488563 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatatttctttgtgaaa 17488464  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  17488463 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 17488420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 45014605 - 45014462
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  45014605 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 45014506  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  45014505 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 45014462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 45024682 - 45024539
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  45024682 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 45024583  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  45024582 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 45024539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 18651091 - 18650948
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  18651091 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 18650993  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  18650992 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 18650948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 18663209 - 18663066
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  18663209 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 18663111  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  18663110 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 18663066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 5337242 - 5337384
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || ||    
T  5337242 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaaa 5337340  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5337341 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5337384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 5347095 - 5347237
Alignment:
Q  12 tgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    ||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || ||    
T  5347095 tgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaaa 5347193  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5347194 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5347237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9502867 - 9502956
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  9502867 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 9502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9514233 - 9514322
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  9514233 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 9514322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 16135423 - 16135489
Alignment:
Q  106 ggaatattcctaatgttttgtacttcaattgttcata-gtcttaaatgaacattgaagatgcccttt 171  Q
    |||||||| | ||||| ||||||||||| |||| ||| || ||||||||||||||||||||||||||    
T  16135423 ggaatatttcaaatgtattgtacttcaaatgtttataagttttaaatgaacattgaagatgcccttt 16135489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 24696691 - 24696834
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||       |||||||||||||||||| | |  |||||    
T  24696691 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaa 24696790  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  24696791 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 24696834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 29423238 - 29423189
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  29423238 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 29423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 72429 - 72465
Alignment:
Q  125 gtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  72429 gtacttcaagtgttcataatcttaaatgaacattgaa 72465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 20947664 - 20947433
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20947664 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 20947565  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20947564 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 20947465  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| |||||||||||||||| ||| |||||||    
T  20947464 tctcagtcatgtacttttctaggccttcattt 20947433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 20958053 - 20957822
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20958053 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 20957954  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20957953 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 20957854  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    ||| |||||||||||||||| ||| |||||||    
T  20957853 tctcagtcatgtacttttctaggccttcattt 20957822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 19548666 - 19548898
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19548666 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcaacatgaaaaacatctaggatgatattcttaatggaat 19548765  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  19548766 attcctaatgttttgtacttcaaatgttcatagtcttaaatgaacattgaagatgccctttttgacttaaatcaaataaatgtctttattccttgattga 19548865  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| || |||||||||||||||| ||||    
T  19548866 tcttagtcaatatacttttctgggcttttattt 19548898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 36316233 - 36316001
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  36316233 atgatttgtaagactcttatttgatgtaatcaaatcctaatagtggaacatcgatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 36316134  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36316133 attccaaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgtctttattccttgattga 36316034  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||| ||| ||||    
T  36316033 tcttagtcaatgtactttactgggattttattt 36316001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 27412021 - 27411878
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  27412021 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 27411922  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  27411921 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 27411878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 32070313 - 32070170
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    || |||||||||||||||||| |||  || ||    
T  32070313 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaa 32070214  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  32070213 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 32070170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 18361150 - 18361007
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  18361150 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 18361052  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  18361051 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 18361007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21753316 - 21753173
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21753316 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21753218  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21753217 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21762603 - 21762460
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  21762603 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 21762505  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  21762504 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 21762460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 26192189 - 26192332
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  26192189 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 26192287  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  26192288 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 26192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 26202793 - 26202936
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  26202793 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 26202891  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  26202892 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 26202936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 33939190 - 33939047
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  33939190 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 33939092  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  33939091 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 33939047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 33949590 - 33949447
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  33949590 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 33949492  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  33949491 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 33949447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 18390084 - 18389964
Alignment:
Q  34 atgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatggaatattcctaatgttttgtacttc 131  Q
    ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || ||||||||||       |||| ||    
T  18390084 atgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaaatattccta-------gtacatc 18389993  T
Q  132 aattgttcatagtcttaaatgaacattgaa 161  Q
    || |||||||||||||||||||||||||||    
T  18389992 aa-tgttcatagtcttaaatgaacattgaa 18389964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 8765553 - 8765642
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  8765553 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 8765642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 11411297 - 11411386
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||||    
T  11411297 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattc 11411386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 21484223 - 21484414
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtg-aaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaa 109  Q
    ||||||||||||||||||| || |||||||| ||||||||||||| ||||||   ||||||| ||       |||||||| ||||||||||| | |||||    
T  21484223 atgatttgtaagacttgtatttgatgtaatc-aatcctaatagtgaaaacataactgaagtggagtgattgcaacatctaagatgatattctcattggaa 21484321  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattg 209  Q
    |||||| |       ||||||||| ||||||||||||||||||||||||| | ||  ||||||| || |||| |   ||||||| |||||| ||||||||    
T  21484322 tattccca-------gtacttcaa-tgttcatagtcttaaatgaacattgcatat--ccttttttacattaaccttgtaaatgcctttattgcttgattg 21484411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 31105168 - 31105093
Alignment:
Q  135 tgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    ||||||||||||||||||||||||||| ||  |||||||| | ||||||   ||||||  |||||| |||||||||||    
T  31105168 tgttcatagtcttaaatgaacattgaatat--cctttttggcattaatcttgtaaatgactttattgcttgattgatc 31105093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 22244587 - 22244538
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  22244587 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 22244538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 23378771 - 23378820
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    ||||||||||||||||  | || ||||||||||||| |||||||||||||    
T  23378771 atgatttgtaagacttccatttgatgtaatcaaatcgtaatagtgaaaca 23378820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 31105285 - 31105236
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  31105285 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 31105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 49387571 - 49387802
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49387571 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 49387670  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  49387671 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgattga 49387770  T
Q  211 tcttagtcatgtacttttctgggctttcattt 242  Q
    |||||||||||||||||| |||||||||||||    
T  49387771 tcttagtcatgtacttttttgggctttcattt 49387802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 24873455 - 24873687
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24873455 atgatttgtaagacttgtaatttatgtaatcaaatcctaatagtgatacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 24873554  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||||    
T  24873555 attcctaatgttttgtacttcaaatgttcatagtcttaaatgaacattgaagatgtcctctttgacttttatcaaataaatgcctttattccttgattga 24873654  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  24873655 tcttagtcaatgtactttactgggcttttattt 24873687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 24793322 - 24793114
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||| ||||||  || || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24793322 atgatttgcaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatagaaaacatctaggatgatattcttaatggaat 24793223  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  24793222 attcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgattga 24793123  T
Q  211 tcttagtca 219  Q
    |||||||||    
T  24793122 tcttagtca 24793114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 17733980 - 17733773
Alignment:
Q  14 atttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatatt 113  Q
    ||||||||||||  || || ||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||||    
T  17733980 atttgtaagactcttatttgatgtaatcaaatcataatagtgaaacatttatgaagtgtagcatggaaagcatctaggatcatattcttaatggaatatt 17733881  T
Q  114 cctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccct--ttttgactttaatcaaataaatgcttttattccttgattgat 211  Q
    |||||||||||||||||||| |||||||| |||| ||| |||||||||||||||||  |||||||||||| ||||||||||  |||||||||||||||||    
T  17733880 cctaatgttttgtacttcaaatgttcataatcttgaataaacattgaagatgccctttttttgactttaaccaaataaatgtctttattccttgattgat 17733781  T
Q  212 cttagtca 219  Q
    ||||||||    
T  17733780 cttagtca 17733773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 19035249 - 19035042
Alignment:
Q  14 atttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatatt 113  Q
    ||||||||||||  || || ||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||||    
T  19035249 atttgtaagactcttatttgatgtaatcaaatcataatagtgaaacatttatgaagtgtagcatggaaagcatctaggatcatattcttaatggaatatt 19035150  T
Q  114 cctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccct--ttttgactttaatcaaataaatgcttttattccttgattgat 211  Q
    |||||||||||||||||||| |||||||| |||| ||| |||||||||||||||||  |||||||||||| ||||||||||  |||||||||||||||||    
T  19035149 cctaatgttttgtacttcaaatgttcataatcttgaataaacattgaagatgccctttttttgactttaaccaaataaatgtctttattccttgattgat 19035050  T
Q  212 cttagtca 219  Q
    ||||||||    
T  19035049 cttagtca 19035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 21542479 - 21542707
Alignment:
Q  14 atttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatatt 113  Q
    ||||||||||||   | ||||||||||||||||||| ||||| |||||  ||||| || || |||   ||||||||||||||||||| | || |||||||    
T  21542479 atttgtaagactctcatttaatgtaatcaaatcctagtagtgtaacatcaatgaaatgtagtatgtgtaacatctaggatgatattcatgatcgaatatt 21542578  T
Q  114 cctaatgttttgtacttcaattgttc-atagtcttaaatgaacattgaagatgccctttttgactttaat-caaataaatgcttttattccttgattgat 211  Q
    |||||| |||||||||| || ||||| | ||||||||||||||||||||||||||   |||||||||||| ||||||||||| |||||||||| ||||||    
T  21542579 cctaatattttgtactttaaatgttcaaaagtcttaaatgaacattgaagatgcc---tttgactttaatccaaataaatgcctttattcctttattgat 21542675  T
Q  212 cttagtc-atgtacttttctgggctttcattt 242  Q
    || |||| |||||||||||| |||||| ||||    
T  21542676 ctaagtcaatgtacttttctaggcttttattt 21542707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 29709504 - 29709602
Alignment:
Q  34 atgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttca 132  Q
    ||||||| ||||||||||||| |||| || ||||||||||  ||| | |||||||||||||||||| | |  ||||||||| |||||||||||||||||    
T  29709504 atgtaattaaatcctaatagtaaaacgttaatgaagtgcaatatgtataacatctaggatgatattgtgagaggaatattcttaatgttttgtacttca 29709602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 6422175 - 6422086
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||| |  || |||||||||||||||||||    
T  6422175 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc 6422086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 1685446 - 1685589
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  1685446 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 1685544  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  1685545 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 1685589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 5655821 - 5655964
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  5655821 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 5655919  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  5655920 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 5655964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 8435868 - 8435918
Alignment:
Q  83 acatctaggatgatattcttaatggaatattcctaatgttttgtacttcaa 133  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  8435868 acatctaggatgatattcttagaggaatattcctaatgtattgtacttcaa 8435918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 8439413 - 8439463
Alignment:
Q  83 acatctaggatgatattcttaatggaatattcctaatgttttgtacttcaa 133  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  8439413 acatctaggatgatattcttataggaatattcctaatgtattgtacttcaa 8439463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8972719 - 8972576
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  8972719 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 8972621  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  8972620 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 8972576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8983274 - 8983131
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  8983274 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 8983176  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  8983175 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 8983131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 9537008 - 9536865
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  9537008 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 9536910  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  9536909 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 9536865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 9547334 - 9547191
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  9547334 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 9547236  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  9547235 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 9547191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 6432615 - 6432526
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||  |||| |  || |||||||||||||||||||    
T  6432615 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaaaagcagtaataataacatctaggatgatattc 6432526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 11044673 - 11044751
Alignment:
Q  64 atgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata 142  Q
    |||||||| || ||| | |||||||||||||||| |||||   ||||||| |||||||||| || ||||||||||||||    
T  11044673 atgaagtgtagtatgcataacatctaggatgatactcttagaagaatatttctaatgttttatatttcaattgttcata 11044751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 12182 - 12325
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatga--aaaacatctaggatgatatt-cttaatgg 107  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||  ||||    |||||||||||||||||| | |  |||    
T  12182 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagca--atgattttaacatctaggatgatattcccttgtgg 12279  T
Q  108 aatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||||       |||| |||| |||||||||||||||||||||||||||    
T  12280 aatattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 12325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 4371250 - 4371161
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    |  |||||||||||||||||||    
T  4371250 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgctattaacatctaggatgatattc 4371161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 4380969 - 4380880
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    |  |||||||||||||||||||    
T  4380969 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgctattaacatctaggatgatattc 4380880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 16335636 - 16335699
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  16335636 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 16335699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 55478238 - 55478287
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||    
T  55478238 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 55478287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 1117 - 1349
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || || |||||||  | || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  1117 atgatttgtaagactcttatttgatgtaattgagtcttaatagtgaaacattgatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat 1216  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  1217 attcctaatgttttgtacttcaaatgttcatagtcatgaatgaacattgaagatgccctttttgactttaatcaaataaatgcctttattccttgattta 1316  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||||||||| ||||    
T  1317 tcttagtcaatgtactttactgggcttttattt 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 3728 - 3960
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||  || | |||||||||||||| ||||||||||||| | |||||||||| |||| ||||||||||||||||||||||| || ||||    
T  3728 atgatttgtaagactcttattaaatgtaatcaaatcgtaatagtgaaacaatgatgaagtgcatcatggaaaacatctaggatgatattcttgatcgaat 3827  T
Q  111 attcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattga 210  Q
     |||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3828 gttcctaatgttttgtacttcaaatattcatagtcttgaatgaatattgaagatgccctttttgactttaatcaaataaatgcctttattccttgattga 3927  T
Q  211 tcttagtc-atgtacttttctgggctttcattt 242  Q
    |||||||| ||||||||| ||| ||||| ||||    
T  3928 tcttagtcaatgtactttactgagcttttattt 3960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 1399 - 1237
Alignment:
Q  80 aaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgacttt 179  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||     
T  1399 aaaacatctaggatgatattcttgatggaatattcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgccctttttgacttg 1300  T
Q  180 aatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcattt 242  Q
    |||||||||||||  |||||||  |||||||||||||| ||||||||||||| ||||| ||||    
T  1299 aatcaaataaatgtctttattcactgattgatcttagttatgtacttttctgcgcttttattt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 40842 - 41021
Alignment:
Q  64 atgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaaga 163  Q
    ||||||||||  ||||||||||||||||||||||||||||||| | |||| | || |||||||||||||| ||||||||||||| |||||||||||||||    
T  40842 atgaagtgcaatatgaaaaacatctaggatgatattcttaatgaactattgcgaaggttttgtacttcaaatgttcatagtcttgaatgaacattgaaga 40941  T
Q  164 tgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcattt 242  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||| ||||    
T  40942 tgccttttttgactttaatcaaataaatgcttttattccttgattgctcttagtcaatgtactttattgggcttttattt 41021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 241880 - 242089
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaat 110  Q
    |||||||||||||||| || || ||||||||| ||||||||||| | ||||  |||||||| ||  || | ||||||||||||||||||||||  | |||    
T  241880 atgatttgtaagacttctatttgatgtaatcagatcctaatagtaatacatcaatgaagtgtagtgtgtataacatctaggatgatattcttagagaaat 241979  T
Q  111 attcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaat-caaataaatgcttttattccttgatt 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  |||| ||||| || ||||||||||  ||||  ||||||||    
T  241980 attcctaatgttttgtacttcaattgttcataagtcttaaatgaacattgaatatgcc--ttttcacttttatccaaataaatgtgtttaaaccttgatt 242077  T
Q  209 gatcttagtcat 220  Q
     |||| ||||||    
T  242078 aatctaagtcat 242089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 267239 - 267322
Alignment:
Q  135 tgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtca 219  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  267239 tgttcatagtcttta-tgaacattgaagatgccctttttgactttaatcaaataaatacctttattccttgattgatcttagtca 267322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 19571 - 19660
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc 100  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| |||| |  || |||||||||||||||||||    
T  19571 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc 19660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 8038 - 8181
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  8038 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 8136  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  8137 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 8181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 234184 - 234327
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag-catgaaaaacatctaggatgatatt-cttaatgga 108  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||  ||| | |||||||||||||||||| |||  || |    
T  234184 atgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatg-ataacatctaggatgatattcctttgtgaa 234282  T
Q  109 atattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    |||||||||       |||| |||| |||||||||||||||||||||||||||    
T  234283 atattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 234327  T

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Target: scaffold0611 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8243 - 8100
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| |||||||| ||||       |||||||||||||||||| | |  |||||    
T  8243 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaattatgaagagcagtgattttaacatctaggatgatattcccttgtggaa 8144  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  8143 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 8100  T

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Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 93048 - 93191
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatatt-cttaatggaa 109  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||| | |||||| ||||       |||||||||||||||||| | |  |||||    
T  93048 atgatttgtaagactactatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttttggaa 93147  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa 161  Q
    ||||||||       |||| |||| |||||||||||||||||||||||||||    
T  93148 tattccta-------gtacatcaa-tgttcatagtcttaaatgaacattgaa 93191  T

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Target: scaffold0142 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 210
Target Start/End: Original strand, 29027 - 29145
Alignment:
Q  82 aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaa 181  Q
    |||||||||||||||||||| | ||||||||| |||       ||| |||||| |||||||||||||||||||||||||| ||  |||||||||| ||||    
T  29027 aacatctaggatgatattctcattggaatattgcta-------gtatttcaat-gttcatagtcttaaatgaacattgaatat--cctttttgacattaa 29116  T
Q  182 tcaaataaatgcttttattccttgattga 210  Q
     |   ||||||| |||||| |||||||||    
T  29117 ccttgtaaatgcatttattgcttgattga 29145  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 198888 - 199024
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaa-catttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaa 109  Q
    ||||||||||||||||||| || |||||| ||| |||||||||||||| |||   ||||||||||       |||||||||||||||||||||| |||||    
T  198888 atgatttgtaagacttgtatttgatgtaaacaa-tcctaatagtgaaaacataactgaagtgcagtgattgcaacatctaggatgatattcttattggaa 198986  T
Q  110 tattcctaatgttttgtacttcaattgttcatagtcttaaatgaac 155  Q
    ||||| ||       ||||||||| |||||||||||||||||||||    
T  198987 tattcata-------gtacttcaa-tgttcatagtcttaaatgaac 199024  T

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Target: scaffold0072 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 28630 - 28727
Alignment:
Q  64 atgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaa 161  Q
    |||||||||| |||| | ||||||||| |||| ||||||    |||||||||||||| ||||||||||| |||||||| |||||| |||||||| ||||    
T  28630 atgaagtgcaacatgtataacatctagaatgaaattctttgatgaatattcctaatg-tttgtacttcatttgttcataagtctttaatgaacaatgaa 28727  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 65488 - 65370
Alignment:
Q  82 aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaa 181  Q
    |||||||||||||||||||||  | |||||||||||       ||||||||| ||||||||||||| |||||||| |||||||  | |||||||| ||||    
T  65488 aacatctaggatgatattcttgttcgaatattccta-------gtacttcaaatgttcatagtcttgaatgaacactgaagat--cttttttgacattaa 65398  T
Q  182 tcaaataaatgcttttattccttgattg 209  Q
    ||   ||||||  |||||| ||||||||    
T  65397 tcttgtaaatgtatttattgcttgattg 65370  T

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Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 17482 - 17531
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    |||||||||||||||   | ||||||||||||||||||||||||||||||    
T  17482 atgatttgtaagactaccatttaatgtaatcaaatcctaatagtgaaaca 17531  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 216479 - 216376
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtg-aaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaa 109  Q
    ||||||||||||||||||| || |||||||| ||||||||||||| ||||||   |||||||||| |     |||||||||||||||||||  | |||||    
T  216479 atgatttgtaagacttgtacttgatgtaatc-aatcctaatagtgaaaacataattgaagtgcagtaattgcaacatctaggatgatattcacattggaa 216381  T
Q  110 tattc 114  Q
    |||||    
T  216380 tattc 216376  T

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Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 310214 - 310277
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  310214 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 310277  T

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Target: scaffold0234 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 21351 - 21414
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    ||||||||||||| |   |||| ||||||||||||||||||||||||||| | |||||| ||||    
T  21351 atgatttgtaagaataccaattgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 21414  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 15721 - 15658
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcag 74  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | |||||| ||||    
T  15721 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcag 15658  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 74913 - 74971
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaag 69  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | ||||||    
T  74913 atgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaag 74971  T

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Target: scaffold0406 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 15146 - 15062
Alignment:
Q  125 gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc 212  Q
    ||||||||| ||||||||||||| ||||||| ||||||||   ||||||||| ||| ||   ||||||  |||||| |||||||||||    
T  15146 gtacttcaagtgttcatagtcttgaatgaaccttgaagat---ctttttgacattagtcttgtaaatgtctttatttcttgattgatc 15062  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 13694 - 13645
Alignment:
Q  11 atgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 60  Q
    ||||||||||||||||  | || ||||||||||||| |||||||||||||    
T  13694 atgatttgtaagacttccatttgatgtaatcaaatcgtaatagtgaaaca 13645  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 13146 - 13174
Alignment:
Q  34 atgtaatcaaatcctaatagtgaaacatt 62  Q
    |||||||||||||||||||||||||||||    
T  13146 atgtaatcaaatcctaatagtgaaacatt 13174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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