View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15025_high_61 (Length: 228)
Name: NF15025_high_61
Description: NF15025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15025_high_61 |
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Alignment Details
Target: chr4 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 6089362 - 6089230
Alignment:
| Q |
1 |
tggatctatgatttatggtggtggaggtgtgattcaagggttggttgaaggaggaggaggaagtggtggttcagttccatttactggatatgcttctgtt |
100 |
Q |
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| T |
6089362 |
tggatctatgatttatggtggtggaggtgtgattcaaggtttggttgaaggaggagga---agtggtggttcagttccatttactggatatgcttctgtt |
6089266 |
T |
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| Q |
101 |
ttgaaggattctaggtttttgaaaccagctcaagaa |
136 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
6089265 |
ttgaaggattctaggtttttgaaaccagctcaagaa |
6089230 |
T |
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