View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15026_high_20 (Length: 267)
Name: NF15026_high_20
Description: NF15026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15026_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 4613111 - 4613348
Alignment:
| Q |
18 |
aaatttcatatcgacaatgattagagtttcatttgactgttctgtcttggctcttgggttttgaatttcgagtcaacatttcttttctcatgattcagag |
117 |
Q |
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| T |
4613111 |
aaatttcatatcgacaatgattagagtttcatttgactgttctgtcttggctcttgggttttgaatttcgagtcaacatttcttttctcatgattcagag |
4613210 |
T |
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| Q |
118 |
cttaaactgaacaaaaacatcattccaatttctatctagtataattaaggggtaatatagacaatgcatattatttgacagaataatattaacctcatcc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4613211 |
cttaaactgaacaaaaacatcattccaatttctatctagtataattaaggggtaatatagacaatgcatattatttgacagaataatattaacctcatcc |
4613310 |
T |
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| Q |
218 |
tcactattttcgtgcagtgtgtcgataatatctgtgct |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
4613311 |
tcactattttcgtgcagtgtgtcgataatatctgtgct |
4613348 |
T |
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