View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15026_low_13 (Length: 391)
Name: NF15026_low_13
Description: NF15026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15026_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 11 - 367
Target Start/End: Original strand, 3175493 - 3175849
Alignment:
| Q |
11 |
ctctttagttcctgataattttattcaaaataaatgcaaataagaaattaattagtagatttttaaataaaacattttggagaagtataactttttatta |
110 |
Q |
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| T |
3175493 |
ctcttaagttcctgataattttattcaaaataaatgcaaataagaaattaattagtagatttttaaataaaacattttggagaagtataactttttatta |
3175592 |
T |
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| Q |
111 |
gtaacagtgacactaacaaccattttacaactgtctcgtatacgatttgaattttgtctcttaaatatacaaagtcaaacgtttaggattgaaccgacac |
210 |
Q |
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| T |
3175593 |
gtaacggtgacactaacaaccatgttacaactgtctcgtataagatttgaattttttcgcttaaatatacaaagtcaaacgtttagcattgaaccgacac |
3175692 |
T |
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| Q |
211 |
ctcatagacgaaaatatcactaatgagttttnnnnnnntttagtgggggtttgaatgttgttccttaaagctactatgttaagatttttccacttatact |
310 |
Q |
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| T |
3175693 |
ctcagagacgaaaatatcactaatgagttttaaaaaaatttagtggggatttgaatgctgttccttaaagctactatgttaagatttttccacttatact |
3175792 |
T |
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| Q |
311 |
ttatagacaaaatgtaataaaaacattgtatttttgaaccccagatcattcatatat |
367 |
Q |
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| T |
3175793 |
ttatagacaaaatgtaataaaaacattgtatttttgaactccggttcattcatatat |
3175849 |
T |
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