View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15026_low_2 (Length: 690)

Name: NF15026_low_2
Description: NF15026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15026_low_2
NF15026_low_2
[»] chr5 (51 HSPs)
chr5 (511-673)||(26716290-26716454)
chr5 (511-673)||(26986030-26986194)
chr5 (528-673)||(17138191-17138338)
chr5 (498-673)||(26691621-26691797)
chr5 (498-673)||(26961353-26961529)
chr5 (498-673)||(1795397-1795574)
chr5 (539-673)||(43357696-43357832)
chr5 (511-642)||(30284577-30284708)
chr5 (498-642)||(32707801-32707944)
chr5 (511-673)||(5612379-5612543)
chr5 (498-642)||(39690733-39690876)
chr5 (511-642)||(32624894-32625025)
chr5 (511-673)||(3934724-3934889)
chr5 (577-672)||(27938242-27938339)
chr5 (498-642)||(1639753-1639895)
chr5 (511-641)||(21251482-21251613)
chr5 (511-642)||(9792336-9792467)
chr5 (561-640)||(34032436-34032515)
chr5 (511-637)||(5722004-5722130)
chr5 (511-624)||(11906235-11906349)
chr5 (511-639)||(14836398-14836523)
chr5 (563-670)||(18001905-18002014)
chr5 (498-642)||(30777491-30777635)
chr5 (511-642)||(41392682-41392813)
chr5 (498-637)||(33829758-33829892)
chr5 (511-673)||(42366044-42366204)
chr5 (560-642)||(7629125-7629206)
chr5 (528-642)||(32728679-32728793)
chr5 (498-635)||(30918383-30918519)
chr5 (529-609)||(3701233-3701313)
chr5 (562-637)||(26794979-26795054)
chr5 (511-635)||(10656837-10656960)
chr5 (502-635)||(15066147-15066280)
chr5 (533-629)||(9653804-9653900)
chr5 (498-640)||(12852124-12852254)
chr5 (569-673)||(11694284-11694384)
chr5 (528-626)||(5986054-5986152)
chr5 (550-626)||(19102451-19102527)
chr5 (536-606)||(1920878-1920948)
chr5 (535-609)||(12190426-12190500)
chr5 (527-604)||(22774587-22774664)
chr5 (619-673)||(25749731-25749787)
chr5 (562-621)||(6243162-6243219)
chr5 (557-609)||(19321436-19321488)
chr5 (551-609)||(27085421-27085479)
chr5 (570-635)||(7977317-7977382)
chr5 (511-592)||(41233396-41233477)
chr5 (559-595)||(25749740-25749776)
chr5 (571-608)||(1920971-1921008)
chr5 (511-592)||(35746271-35746352)
chr5 (559-595)||(18001913-18001949)
[»] chr8 (42 HSPs)
chr8 (494-672)||(32424922-32425101)
chr8 (498-642)||(36483440-36483583)
chr8 (498-642)||(34901352-34901495)
chr8 (511-642)||(22201307-22201438)
chr8 (511-642)||(32759390-32759521)
chr8 (511-669)||(37372276-37372437)
chr8 (498-642)||(12580523-12580666)
chr8 (498-642)||(16384622-16384765)
chr8 (514-669)||(20182394-20182550)
chr8 (510-670)||(27968119-27968283)
chr8 (510-670)||(28025105-28025269)
chr8 (498-642)||(37668587-37668730)
chr8 (511-642)||(4245957-4246088)
chr8 (511-642)||(45217190-45217321)
chr8 (511-670)||(27886207-27886368)
chr8 (511-670)||(27944865-27945026)
chr8 (498-635)||(6028492-6028628)
chr8 (498-642)||(13422213-13422356)
chr8 (498-637)||(43771679-43771817)
chr8 (498-635)||(2872888-2873023)
chr8 (498-635)||(32877442-32877578)
chr8 (528-672)||(38388701-38388847)
chr8 (498-635)||(5818288-5818424)
chr8 (498-635)||(25022130-25022266)
chr8 (511-672)||(29355640-29355804)
chr8 (511-673)||(3891979-3892145)
chr8 (498-642)||(28876535-28876679)
chr8 (511-607)||(23265666-23265762)
chr8 (548-629)||(10349298-10349379)
chr8 (511-642)||(32638836-32638957)
chr8 (561-627)||(24100178-24100244)
chr8 (545-626)||(42949181-42949262)
chr8 (588-639)||(32764-32814)
chr8 (562-637)||(30804725-30804795)
chr8 (618-672)||(7411726-7411782)
chr8 (511-576)||(19436291-19436356)
chr8 (511-576)||(19572440-19572505)
chr8 (588-637)||(40412508-40412557)
chr8 (570-637)||(12357954-12358022)
chr8 (570-637)||(12359082-12359150)
chr8 (511-602)||(19948006-19948097)
chr8 (571-621)||(27109165-27109215)
[»] chr2 (43 HSPs)
chr2 (498-673)||(2319280-2319456)
chr2 (511-673)||(8482854-8483018)
chr2 (511-672)||(35342334-35342498)
chr2 (498-673)||(44156602-44156779)
chr2 (511-672)||(21104499-21104662)
chr2 (511-670)||(4561805-4561967)
chr2 (511-669)||(34146197-34146357)
chr2 (560-673)||(3563906-3564021)
chr2 (528-663)||(35996677-35996813)
chr2 (511-673)||(1005530-1005693)
chr2 (503-609)||(40497388-40497494)
chr2 (511-635)||(6497626-6497750)
chr2 (498-642)||(7876719-7876862)
chr2 (511-673)||(14217087-14217255)
chr2 (498-642)||(22484272-22484415)
chr2 (498-637)||(38602297-38602435)
chr2 (511-635)||(4170479-4170603)
chr2 (498-668)||(28746598-28746765)
chr2 (511-672)||(31236124-31236287)
chr2 (498-642)||(33324823-33324966)
chr2 (498-673)||(1776373-1776549)
chr2 (498-642)||(7807344-7807487)
chr2 (511-642)||(4355342-4355473)
chr2 (498-637)||(40308872-40309010)
chr2 (572-673)||(14824216-14824320)
chr2 (511-628)||(25933582-25933699)
chr2 (498-626)||(16561805-16561932)
chr2 (511-637)||(6124190-6124316)
chr2 (511-609)||(37134301-37134399)
chr2 (511-626)||(18300989-18301104)
chr2 (511-673)||(12206042-12206205)
chr2 (498-607)||(24585535-24585642)
chr2 (511-670)||(3545520-3545682)
chr2 (511-609)||(22570954-22571052)
chr2 (539-639)||(33738107-33738205)
chr2 (498-642)||(45159279-45159411)
chr2 (511-602)||(43214589-43214682)
chr2 (595-669)||(9293216-9293282)
chr2 (559-595)||(3563974-3564010)
chr2 (570-642)||(20536841-20536913)
chr2 (511-593)||(5588124-5588206)
chr2 (587-669)||(10573587-10573671)
chr2 (570-642)||(40536308-40536381)
[»] scaffold2089 (4 HSPs)
scaffold2089 (309-438)||(625-753)
scaffold2089 (1-75)||(928-1002)
scaffold2089 (100-146)||(877-923)
scaffold2089 (261-312)||(765-815)
[»] chr7 (58 HSPs)
chr7 (511-669)||(44960076-44960236)
chr7 (529-673)||(23970063-23970209)
chr7 (511-640)||(33454084-33454213)
chr7 (498-642)||(40095652-40095795)
chr7 (510-672)||(21409404-21409567)
chr7 (498-642)||(11829691-11829834)
chr7 (498-642)||(27353923-27354066)
chr7 (498-642)||(38263001-38263144)
chr7 (498-642)||(48163410-48163553)
chr7 (514-669)||(44269743-44269899)
chr7 (527-673)||(40041409-40041556)
chr7 (511-642)||(16850800-16850931)
chr7 (510-637)||(23311735-23311862)
chr7 (511-642)||(27555339-27555470)
chr7 (511-663)||(35159879-35160033)
chr7 (511-662)||(38064609-38064763)
chr7 (572-673)||(554827-554930)
chr7 (498-642)||(34238160-34238303)
chr7 (511-637)||(11058366-11058490)
chr7 (511-642)||(34122587-34122718)
chr7 (494-673)||(24956249-24956429)
chr7 (498-635)||(1043048-1043184)
chr7 (498-642)||(25969399-25969543)
chr7 (511-642)||(9250390-9250523)
chr7 (511-635)||(27398024-27398148)
chr7 (600-672)||(1400206-1400280)
chr7 (560-652)||(26973116-26973210)
chr7 (511-637)||(18113914-18114040)
chr7 (511-637)||(26773687-26773813)
chr7 (511-637)||(49015045-49015167)
chr7 (511-614)||(8056332-8056431)
chr7 (497-642)||(36202758-36202892)
chr7 (498-642)||(42897004-42897136)
chr7 (572-670)||(21179911-21180011)
chr7 (564-641)||(47720143-47720220)
chr7 (529-621)||(1363003-1363095)
chr7 (511-642)||(26845866-26845997)
chr7 (498-642)||(39520802-39520934)
chr7 (498-595)||(23079057-23079153)
chr7 (559-673)||(38064728-38064843)
chr7 (511-581)||(4291526-4291596)
chr7 (572-637)||(7416689-7416754)
chr7 (498-626)||(19510525-19510652)
chr7 (562-608)||(19820868-19820914)
chr7 (571-662)||(19820881-19820974)
chr7 (570-629)||(47238600-47238659)
chr7 (571-609)||(27688013-27688051)
chr7 (562-635)||(8028762-8028835)
chr7 (569-642)||(36660550-36660622)
chr7 (642-672)||(15878362-15878392)
chr7 (619-670)||(36757956-36758009)
chr7 (619-670)||(36767480-36767533)
chr7 (562-595)||(15878372-15878405)
chr7 (559-595)||(1400216-1400252)
chr7 (570-626)||(16564365-16564421)
chr7 (511-543)||(16564427-16564459)
chr7 (511-543)||(16601203-16601235)
chr7 (570-626)||(16601241-16601297)
[»] chr1 (48 HSPs)
chr1 (511-673)||(9781659-9781823)
chr1 (511-672)||(41675927-41676090)
chr1 (501-673)||(29167955-29168128)
chr1 (511-669)||(32381010-32381160)
chr1 (502-642)||(1036468-1036607)
chr1 (498-642)||(6916844-6916987)
chr1 (498-642)||(20409524-20409667)
chr1 (498-642)||(38330432-38330575)
chr1 (498-642)||(52895683-52895826)
chr1 (511-642)||(14167101-14167234)
chr1 (511-635)||(2364694-2364818)
chr1 (498-642)||(28949211-28949354)
chr1 (572-672)||(38218461-38218563)
chr1 (498-642)||(1043232-1043375)
chr1 (511-642)||(38948749-38948880)
chr1 (511-629)||(34432366-34432484)
chr1 (570-672)||(24590062-24590166)
chr1 (511-635)||(8132200-8132324)
chr1 (511-669)||(9528784-9528940)
chr1 (498-642)||(13012962-13013105)
chr1 (545-670)||(24851525-24851652)
chr1 (511-635)||(28659277-28659401)
chr1 (498-642)||(37104125-37104268)
chr1 (511-635)||(10822419-10822545)
chr1 (511-637)||(40776012-40776138)
chr1 (527-670)||(48715165-48715310)
chr1 (511-637)||(3426865-3426991)
chr1 (527-673)||(34096490-34096637)
chr1 (498-635)||(37346825-37346961)
chr1 (485-634)||(30323708-30323856)
chr1 (562-673)||(29861869-29861978)
chr1 (511-635)||(43189672-43189796)
chr1 (498-670)||(3708219-3708392)
chr1 (498-628)||(5984232-5984361)
chr1 (511-670)||(33039630-33039790)
chr1 (560-637)||(12158778-12158853)
chr1 (511-620)||(25256633-25256742)
chr1 (511-595)||(2472871-2472955)
chr1 (511-673)||(10763678-10763834)
chr1 (527-635)||(31653379-31653487)
chr1 (570-642)||(36367672-36367744)
chr1 (551-609)||(2222982-2223040)
chr1 (572-637)||(9092467-9092533)
chr1 (538-626)||(14334204-14334292)
chr1 (569-607)||(2364811-2364849)
chr1 (563-609)||(4812033-4812079)
chr1 (643-672)||(36551535-36551564)
chr1 (569-637)||(41027921-41027989)
[»] chr6 (28 HSPs)
chr6 (511-672)||(19128170-19128333)
chr6 (511-642)||(8356975-8357106)
chr6 (498-642)||(1036796-1036939)
chr6 (501-642)||(31195839-31195979)
chr6 (498-673)||(26327160-26327335)
chr6 (498-670)||(234311-234487)
chr6 (511-668)||(6707983-6708142)
chr6 (511-672)||(11105303-11105466)
chr6 (511-642)||(32130629-32130760)
chr6 (498-642)||(3212482-3212625)
chr6 (511-672)||(13607723-13607886)
chr6 (524-642)||(7188749-7188867)
chr6 (511-620)||(32017994-32018103)
chr6 (570-663)||(7254996-7255092)
chr6 (562-670)||(31079669-31079780)
chr6 (498-626)||(25834482-25834609)
chr6 (498-609)||(27083990-27084100)
chr6 (569-673)||(10894456-10894564)
chr6 (511-629)||(3299158-3299276)
chr6 (511-620)||(22989326-22989435)
chr6 (511-620)||(23798962-23799071)
chr6 (511-592)||(13061325-13061406)
chr6 (514-625)||(26560827-26560928)
chr6 (569-635)||(21113557-21113623)
chr6 (559-601)||(31079736-31079778)
chr6 (572-609)||(10894586-10894623)
chr6 (559-595)||(7255055-7255091)
chr6 (511-575)||(29892983-29893047)
[»] chr4 (42 HSPs)
chr4 (551-672)||(24793669-24793792)
chr4 (498-673)||(40694075-40694251)
chr4 (511-672)||(2586353-2586516)
chr4 (498-674)||(36511869-36512047)
chr4 (511-669)||(37992473-37992634)
chr4 (498-642)||(8064079-8064222)
chr4 (511-672)||(17892265-17892428)
chr4 (498-642)||(19738702-19738845)
chr4 (498-642)||(52122839-52122982)
chr4 (570-673)||(31946163-31946268)
chr4 (570-672)||(36943745-36943849)
chr4 (538-672)||(754215-754350)
chr4 (511-642)||(52721281-52721412)
chr4 (511-637)||(21637682-21637808)
chr4 (511-672)||(3109243-3109406)
chr4 (498-642)||(53322342-53322485)
chr4 (511-642)||(5834847-5834978)
chr4 (511-670)||(46431873-46432034)
chr4 (498-669)||(47607115-47607290)
chr4 (538-670)||(726496-726629)
chr4 (511-634)||(5325699-5325822)
chr4 (498-628)||(41145617-41145744)
chr4 (498-673)||(1176986-1177158)
chr4 (511-642)||(42472539-42472670)
chr4 (556-670)||(42630424-42630541)
chr4 (511-637)||(55901114-55901240)
chr4 (511-620)||(27981913-27982022)
chr4 (562-642)||(39957632-39957712)
chr4 (527-634)||(4400501-4400608)
chr4 (511-637)||(21058850-21058978)
chr4 (498-642)||(38492239-38492372)
chr4 (511-595)||(51858849-51858933)
chr4 (557-637)||(49069243-49069323)
chr4 (498-642)||(3403555-3403688)
chr4 (498-626)||(28377001-28377128)
chr4 (570-642)||(14795078-14795150)
chr4 (545-595)||(44521994-44522044)
chr4 (498-554)||(14795028-14795083)
chr4 (583-629)||(31226042-31226088)
chr4 (511-576)||(24296515-24296580)
chr4 (585-642)||(52572280-52572336)
chr4 (511-591)||(51674875-51674955)
[»] chr3 (73 HSPs)
chr3 (498-670)||(13748388-13748560)
chr3 (498-672)||(28968515-28968691)
chr3 (498-673)||(55268953-55269125)
chr3 (562-672)||(47642074-47642186)
chr3 (511-673)||(6134319-6134483)
chr3 (511-673)||(21157666-21157830)
chr3 (513-673)||(25700779-25700942)
chr3 (545-673)||(19421467-19421597)
chr3 (538-672)||(7899656-7899793)
chr3 (511-670)||(22289661-22289822)
chr3 (527-673)||(45347331-45347479)
chr3 (511-673)||(41742009-41742173)
chr3 (498-642)||(7327717-7327860)
chr3 (511-609)||(983211-983309)
chr3 (535-673)||(39663999-39664137)
chr3 (511-673)||(20510093-20510257)
chr3 (511-642)||(28882648-28882779)
chr3 (511-642)||(37996781-37996912)
chr3 (511-637)||(28704744-28704870)
chr3 (511-637)||(30226437-30226562)
chr3 (511-673)||(38889023-38889180)
chr3 (498-670)||(30787501-30787675)
chr3 (498-642)||(35389755-35389898)
chr3 (498-642)||(40497335-40497478)
chr3 (529-673)||(42229709-42229845)
chr3 (512-637)||(3983715-3983841)
chr3 (498-635)||(42464884-42465020)
chr3 (498-626)||(52121185-52121312)
chr3 (511-634)||(52684218-52684341)
chr3 (511-673)||(19879040-19879194)
chr3 (498-635)||(48122830-48122966)
chr3 (498-642)||(1679668-1679811)
chr3 (498-673)||(2122709-2122890)
chr3 (52-146)||(6418291-6418384)
chr3 (53-138)||(6822463-6822548)
chr3 (513-637)||(22310724-22310848)
chr3 (562-637)||(10225137-10225212)
chr3 (510-637)||(52505808-52505934)
chr3 (511-592)||(29915878-29915959)
chr3 (511-592)||(29965031-29965112)
chr3 (562-642)||(2567368-2567448)
chr3 (53-132)||(7575908-7575987)
chr3 (570-637)||(5271545-5271611)
chr3 (511-637)||(25937039-25937165)
chr3 (511-642)||(47750859-47750991)
chr3 (78-143)||(6552162-6552226)
chr3 (570-673)||(19349541-19349642)
chr3 (498-642)||(22611354-22611487)
chr3 (562-635)||(45532957-45533030)
chr3 (570-635)||(53192564-53192629)
chr3 (56-144)||(6471854-6471941)
chr3 (56-144)||(6749803-6749890)
chr3 (78-146)||(7588769-7588835)
chr3 (557-637)||(21382307-21382387)
chr3 (570-673)||(13353132-13353238)
chr3 (562-637)||(15768995-15769070)
chr3 (561-662)||(48334019-48334124)
chr3 (100-146)||(6510781-6510827)
chr3 (559-640)||(25322444-25322525)
chr3 (584-662)||(48333101-48333181)
chr3 (570-634)||(1528568-1528631)
chr3 (561-609)||(48333147-48333195)
chr3 (1-40)||(7588676-7588715)
chr3 (570-609)||(53165512-53165551)
chr3 (536-626)||(33239992-33240082)
chr3 (402-474)||(6750040-6750109)
chr3 (537-598)||(28548126-28548187)
chr3 (559-608)||(48334088-48334137)
chr3 (76-144)||(6584761-6584828)
chr3 (1-37)||(6950278-6950314)
chr3 (402-446)||(6950544-6950588)
chr3 (559-595)||(13353143-13353179)
chr3 (559-595)||(47642140-47642176)
[»] scaffold0285 (1 HSPs)
scaffold0285 (511-673)||(13267-13430)
[»] scaffold0640 (1 HSPs)
scaffold0640 (498-642)||(8062-8205)
[»] scaffold0250 (1 HSPs)
scaffold0250 (498-642)||(5517-5660)
[»] scaffold0177 (1 HSPs)
scaffold0177 (562-635)||(25518-25591)
[»] scaffold0445 (2 HSPs)
scaffold0445 (93-146)||(8776-8829)
scaffold0445 (318-366)||(9028-9076)
[»] scaffold0037 (1 HSPs)
scaffold0037 (498-634)||(27769-27894)
[»] scaffold0425 (1 HSPs)
scaffold0425 (78-146)||(5129-5196)
[»] scaffold0060 (1 HSPs)
scaffold0060 (498-642)||(30414-30557)
[»] scaffold0240 (1 HSPs)
scaffold0240 (511-626)||(10617-10732)
[»] scaffold0112 (1 HSPs)
scaffold0112 (562-635)||(42053-42126)
[»] scaffold0005 (2 HSPs)
scaffold0005 (570-642)||(44581-44653)
scaffold0005 (498-554)||(44648-44703)


Alignment Details
Target: chr5 (Bit Score: 110; Significance: 4e-55; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 26716290 - 26716454
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| | ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  26716290 aaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtatccgaagattaaattttatt 26716389  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||    
T  26716390 tttttaaaaaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctg 26716454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 26986030 - 26986194
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| | ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  26986030 aaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtatccgaagattaaattttatt 26986129  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||    
T  26986130 tttttaaaaaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctg 26986194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 528 - 673
Target Start/End: Complemental strand, 17138338 - 17138191
Alignment:
Q  528 gtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatta 627  Q
    |||||||||||||||| ||||| ||||  || ||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||    
T  17138338 gtatcccctgcgtatcctgcaccgataattgcctgatacttcccgatacgtatcaggagaatatccgaagattaaattttatttttttaaaaagtaatta 17138239  T
Q  628 tctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  17138238 tctgatacttcccgatacgtatcaggagagtatccgataattatcctg 17138191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 26691621 - 26691797
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| | |||||| || ||||||||||||||||  ||||| |||| ||||||||||||| |||||||||||||  |||||||||||||    
T  26691621 ccccgatacttcaaaa-tagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccgaag 26691719  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||  ||||||||||| ||||| |||| |||||||||    
T  26691720 attaaattttattttttttaaaaataattatccgatacttcccgatacgtatcaggatagtatgcgataattatcctg 26691797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 26961353 - 26961529
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| | |||||| || ||||||||||||||||  ||||| |||| ||||||||||||| |||||||||||||  |||||||||||||    
T  26961353 ccccgatacttcaaaa-tagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccgaag 26961451  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||  ||||||||||| ||||| |||| |||||||||    
T  26961452 attaaattttattttttttaaaaataattatccgatacttcccgatacgtatcaggatagtatgcgataattatcctg 26961529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 1795397 - 1795574
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| || |||||||||| |||||| ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||    
T  1795397 ccccgatacttcaaaa-tggttgacgtatcgtatcccctccgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaag 1795495  T
Q  598 attaaatttta-tgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||| | ||||| ||||||||||||| |||||||||||  ||||||||| | |||||||||| |||||||||    
T  1795496 attaaattttatttttttttaaaaataattatccgatacttcccgatacgtatcagaaaagtatccgataattatcctg 1795574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 539 - 673
Target Start/End: Complemental strand, 43357832 - 43357696
Alignment:
Q  539 gtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttc 638  Q
    ||||| ||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  43357832 gtatcctgcaccgatacctgtctgatactttccgatacgtattaaaagagtatccgaagattaaattttatttttttaaaaaataattatccgatacttc 43357733  T
Q  639 ccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||  ||||||||||| |||||| ||| |||||||||    
T  43357732 ccgatacgtatcaggaaagtatctgataattatcctg 43357696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 30284708 - 30284577
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||     
T  30284708 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatccgaagattaaattttatt 30284609  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||   |||||||||||||| ||||||||||||    
T  30284608 ttaaaaaaaaataattatccgatacttcccga 30284577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 32707944 - 32707801
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  32707944 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 32707846  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  32707845 attaaattttatttttttaaaaaataattatctgatactttccga 32707801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 5612543 - 5612379
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||| | ||| | ||| |||| ||||| ||| | ||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  5612543 aaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtatccgaagattaaattttatt 5612444  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||||||| ||||||||| |  |||||||||||||||||| ||| |||||||||    
T  5612443 tttttaaaaaataattatccgatacttcctgatacgtatcaggagagtatctgataattatcctg 5612379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 39690876 - 39690733
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| | |||||||||| | ||||||||| ||     
T  39690876 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaat 39690778  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  39690777 attaaattttatttttttaaaaaataattatccgatactttccga 39690733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 32624894 - 32625025
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||| ||||||||||  |||| ||| | ||||||| |||||||||||  ||||||||||| || ||||||||||||     
T  32624894 aaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctgcccgatacttcccgatacgtattcgaagagtatccaaatattaaattttatt 32624993  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||||||||||| ||||||| ||||    
T  32624994 tttttaaaaaataattatccgatactttccga 32625025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 3934889 - 3934724
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||   |||||||||||||||  |||| |||| ||  ||||||||| |||||||||||||| |||||||||||||||||||||||||     
T  3934889 aaaatggatgacgtattatatcccctgcgtatcccgcaccgatacctacctgatacttaccgatacgtatcaggagagtatccgaagattaaattttatt 3934790  T
Q  611 tttttaaaa-aataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||| |||| ||||||||||  |||||| |||  |||||||| ||||||||||||| |||||||||    
T  3934789 ttttaaaaataataattatccaatactttccgatacgtatcatgagagtatccgataattatcctg 3934724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 577 - 672
Target Start/End: Original strand, 27938242 - 27938339
Alignment:
Q  577 gtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttccc--gacgtatcaggagagtatccgatcattatcct 672  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||   |||||||||||||||||||||| ||||||||    
T  27938242 gtatcagaagagtatccgaagattaaattttatttttttaaaaaataattatccgatacttcccaatacgtatcaggagagtatccgataattatcct 27938339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 1639895 - 1639753
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| ||||||||||| ||     
T  1639895 ccccgatacttcaaaa-tggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaat 1639797  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||||||||| ||||| ||||||    
T  1639796 attaaattttat-ttttaaaaaaataattatccgatacgtcccga 1639753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 511 - 641
Target Start/End: Original strand, 21251482 - 21251613
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaatttta-t 609  Q
    |||||||||||| ||||||||| ||| | |||  |||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| | |    
T  21251482 aaaatggatgacgtaccgtatctcctacttattctgcaccaatatctgtctgatactttccgatacgtatcaggagagtatccgaatattaaatttaatt 21251581  T
Q  610 gtttttaaaaaataattatctgatacttcccg 641  Q
     ||||| ||||||||||| ||||||| |||||    
T  21251582 ttttttgaaaaataattacctgatacgtcccg 21251613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 9792336 - 9792467
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||| ||||| ||||  |||| ||| | ||||||| ||||||||||||   ||||||||| || ||||||||||||     
T  9792336 aaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctgcccgatacttcccgatacgtatccagagagtatccaaatattaaattttatt 9792435  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||||||||||  |||| ||||||    
T  9792436 tttttaaaaaataattatccaatacatcccga 9792467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 561 - 640
Target Start/End: Original strand, 34032436 - 34032515
Alignment:
Q  561 tgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttccc 640  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  34032436 tgatacttcccgatacgtatcaggagagtatccgaagattaatttttattttttaaaaaaataattatctgatacttccc 34032515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 5722004 - 5722130
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| || ||||||||||||||||| ||||||||||  || | |||||||  | |||| |||||| | |||||||||||||||||||||||     
T  5722004 aaaattgatgacgtatcgtatcccctgcgtatcctgcactgatacatgcccgatacttctcaatacatatcaggaaagtatccgaagattaaattttatt 5722103  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||  ||||||||||||||||||||||    
T  5722104 tttaaaaaaaataattatctgatactt 5722130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 624
Target Start/End: Original strand, 11906235 - 11906349
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||| ||||||||||| ||||| |||||||||| ||||||| |||||||||||| | |||||||||||| ||||||||||||     
T  11906235 aaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccgaatattaaattttatt 11906334  T
Q  611 ttt-ttaaaaaataa 624  Q
    ||| |||||||||||    
T  11906335 tttcttaaaaaataa 11906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 639
Target Start/End: Original strand, 14836398 - 14836523
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||| |||| ||  |||||||||||||||| ||||  ||||| |||| |||| |||||||||||||||||||||||||||||| ||||| ||||       
T  14836398 aaaatggttgacgtattgtatcccctgcgtatcctgcatcgatatttgtccgatattttccgatacgtatcagaagagtatccgaatattaattttt--- 14836494  T
Q  611 tttttaaaaaataattatctgatacttcc 639  Q
    ||||| | |||||||||||||||||||||    
T  14836495 ttttttataaataattatctgatacttcc 14836523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 563 - 670
Target Start/End: Complemental strand, 18002014 - 18001905
Alignment:
Q  563 atactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatcc 660  Q
    |||||| ||||||| |||||| |||||||  |||||||||||||||| ||||| ||||||||||||||||||||| |||  |||||||| ||||||||||    
T  18002014 atacttcccgatacatatcaggagagtatttgaagattaaattttattttttttaaaaataattatctgatactttccgatacgtatcaagagagtatcc 18001915  T
Q  661 gatcattatc 670  Q
    ||| ||||||    
T  18001914 gataattatc 18001905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 30777635 - 30777491
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||||| |||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  30777635 ccccgatacttcaaaa-tggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 30777537  T
Q  598 attaaatttta-tgtttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||| | |||||| |||||||||||| ||||||| ||||    
T  30777536 attaaattttattttttttataaaataattatccgatactttccga 30777491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 41392813 - 41392682
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||| ||||| |  |||||||| || ||||||||||||     
T  41392813 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatccaaatattaaattttatt 41392714  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||   |||||||||| ||||||||||| ||||    
T  41392713 ttaaaaaaaaataataatctgatactttccga 41392682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 637
Target Start/End: Original strand, 33829758 - 33829892
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||  || ||||||||| |||||||||||| | ||||||||| ||     
T  33829758 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagagtatccaaat 33829856  T
Q  598 attaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||| | ||||    ||||||||||| |||||||    
T  33829857 attaaattttttttttt----aaataattatccgatactt 33829892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 42366204 - 42366044
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||  ||| |||||||||||||||| |||||||||| ||| | |||| || || |||| |||||| ||| |||||||||||||| | ||||     
T  42366204 aaaatagatgatgtactgtatcccctgcgtatcctgcactgatacctgcccgatatttcccaatacctatcaggagaatatccgaagattaattattatt 42366105  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||    |||||||||||  ||||||||||  | |||||||||||||||||||| |||||||||    
T  42366104 tttt----aaataattatccaatacttcccgatatgtatcaggagagtatccgataattatcctg 42366044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 642
Target Start/End: Original strand, 7629125 - 7629206
Alignment:
Q  560 ctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||| |||  |||||| ||||||||||||||||||||    
T  7629125 ctgatacttcccgatacgtatcaggagagtatctgaagattaaattttat-tttgaaaaaaaaaattatctgatacttcccga 7629206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 528 - 642
Target Start/End: Complemental strand, 32728793 - 32728679
Alignment:
Q  528 gtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatta 627  Q
    |||||||||||||||||||||  |||| ||| | ||||||| |||||||||||| | ||||||||| || |||| ||||||| |||| ||||||||||||    
T  32728793 gtatcccctgcgtatcttgcatcgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattagattttattttttaaaaaaataatta 32728694  T
Q  628 tctgatacttcccga 642  Q
    ||  |||| ||||||    
T  32728693 tccaatacgtcccga 32728679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 30918383 - 30918519
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||  |||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||  | ||||||||  ||     
T  30918383 ccccgatacttcaaaa-tggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtattcggagagtatcaaaat 30918481  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    ||||| ||||||  |||||||||||||||||| |||||    
T  30918482 attaatttttattgttttaaaaaataattatccgatac 30918519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 3701233 - 3701313
Alignment:
Q  529 tatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||||||||| ||||| |||||||||||||||||| | |||| || |||| |||||||| ||||||||||||||||    
T  3701233 tatcccctgcgtatcctgcaccgatatctgtctgatacttcctgatatgtttcaggagagtatctgaagattaaattttat 3701313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 562 - 637
Target Start/End: Complemental strand, 26795054 - 26794979
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||||||||||| | ||||||||| || |||||||||||| |||| |||||||||||||| |||||||    
T  26795054 gatactttccgatacgtatccggagagtatccaaatattaaattttattttttaaaaaaataattatccgatactt 26794979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 635
Target Start/End: Original strand, 10656837 - 10656960
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||| |||| ||| | |||||||  ||||||||||| | ||||||||| || |||||  |||||     
T  10656837 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcgggagagtatccaaatattaa--tttatt 10656934  T
Q  611 tttttaa-aaaataattatctgatac 635  Q
    ||||||| ||||||||| ||||||||    
T  10656935 tttttaagaaaataattttctgatac 10656960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 502 - 635
Target Start/End: Original strand, 15066147 - 15066280
Alignment:
Q  502 catacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagatta 601  Q
    |||||||||||| | |||||  || |||||||| || ||||  ||||| |||||||| | |||| ||||||||||||||| |||||||||| || |||||    
T  15066147 catacttcaaaa-tagatgatgtatcgtatcccatgtgtattctgcaccgatatctgcccgatattttccgatacgtatcggaagagtatcagatgatta 15066245  T
Q  602 aattttatgtt-tttaaaaaataattatctgatac 635  Q
    |||||||| || |||  ||||||||||||||||||    
T  15066246 aattttattttatttttaaaataattatctgatac 15066280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 533 - 629
Target Start/End: Original strand, 9653804 - 9653900
Alignment:
Q  533 ccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatc 629  Q
    ||||||||||  ||||| ||||| || | ||||||| |||||||||||| |||||||||  || ||||||||||||| ||||| |||||||||||||    
T  9653804 ccctgcgtattctgcaccgatatttgcccgatacttcccgatacgtatcggaagagtattggatgattaaattttattttttttaaaaataattatc 9653900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 498 - 640
Target Start/End: Original strand, 12852124 - 12852254
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||           ||| | |||||||||| | ||||||||| ||     
T  12852124 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgata-----------cttcctgatacgtatccggagagtatccaaat 12852211  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttccc 640  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||    
T  12852212 attaaattttatttttttaaaaaataattatccgatacatccc 12852254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 673
Target Start/End: Original strand, 11694284 - 11694384
Alignment:
Q  569 tccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcat 666  Q
    |||||||||||||||||||||||||||||||    |||||| |||||   |||||||||||||||||||||||  |||||||| |||| |||| ||| ||    
T  11694284 tccgatacgtatcagaagagtatccgaagat----ttttattttttt--taaataattatctgatacttcccgatacgtatcaagagaatatctgataat 11694377  T
Q  667 tatcctg 673  Q
    |||||||    
T  11694378 tatcctg 11694384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 528 - 626
Target Start/End: Complemental strand, 5986152 - 5986054
Alignment:
Q  528 gtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    ||||| |||||||||| ||||  ||||| |||| ||||||||| |||||||||  | ||||||||| || |||||||||||| |||| |||||||||||    
T  5986152 gtatctcctgcgtatcctgcatcgatatatgtccgatactttctgatacgtattgggagagtatccaaatattaaattttattttttaaaaaaataatt 5986054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 550 - 626
Target Start/End: Complemental strand, 19102527 - 19102451
Alignment:
Q  550 tgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    ||||||||||| ||||  | |||||||||||||||||||||| |||  |||||||||||| ||||||||||| ||||    
T  19102527 tgatatctgtccgatatgtcccgatacgtatcagaagagtatacgacaattaaattttatttttttaaaaaaaaatt 19102451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 536 - 606
Target Start/End: Original strand, 1920878 - 1920948
Alignment:
Q  536 tgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattt 606  Q
    |||||||| ||||| ||||||||  |||||||| |||||||||||  | ||||||||||||||||||||||    
T  1920878 tgcgtatcatgcaccgatatctgcatgatacttcccgatacgtattgggagagtatccgaagattaaattt 1920948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 12190426 - 12190500
Alignment:
Q  535 ctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||| |||||||||||||||| |||||||   |||||||||||| ||||||| |  ||||||||||||||    
T  12190426 ctgcgtatcctgcactgatatctgtccgatacttcttgatacgtatcaggagagtattcagagattaaattttat 12190500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 604
Target Start/End: Original strand, 22774587 - 22774664
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaat 604  Q
    |||||||||||| |||| ||||| |||||||| | ||||||||||||||||||||   ||||||||| || |||||||    
T  22774587 cgtatcccctgcatatcctgcaccgatatctgcccgatactttccgatacgtatcgagagagtatccaaatattaaat 22774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 619 - 673
Target Start/End: Original strand, 25749731 - 25749787
Alignment:
Q  619 aaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||    
T  25749731 aaataattatctgatactttccgatacgtatcaggagagtatccgataattatcctg 25749787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 621
Target Start/End: Complemental strand, 6243219 - 6243162
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaa 621  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||  |||||||||||    
T  6243219 gatactttccgatacgtatccggagagtatccgaatattaaatttta--tttttaaaaaa 6243162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 19321436 - 19321488
Alignment:
Q  557 tgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||||||| | |||||  |||||||||||||||||||||||||||||||||    
T  19321436 tgtctgatacatcccgatgtgtatcagaagagtatccgaagattaaattttat 19321488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 609
Target Start/End: Original strand, 27085421 - 27085479
Alignment:
Q  551 gatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||  ||||||||||||||||||||||  |||||||||| | ||||||||||||    
T  27085421 gatatctgcatgatactttccgatacgtatcaagagagtatccggaaattaaattttat 27085479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 635
Target Start/End: Original strand, 7977317 - 7977382
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||  | ||||||||  || |||||||||||| ||||||||||||||||||| |||||    
T  7977317 ccgatacgtattcggagagtatctaaatattaaattttatttttttaaaaaataattatccgatac 7977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 592
Target Start/End: Original strand, 41233396 - 41233477
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatc 592  Q
    |||||||||||| || |||||  ||| |||||| ||||  ||||  |||||||||||| |||||||||||||| ||||||||    
T  41233396 aaaatggatgacgtatcgtatttcctacgtatcctgcaacgatacatgtctgatacttcccgatacgtatcaggagagtatc 41233477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 595
Target Start/End: Original strand, 25749740 - 25749776
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    ||||||||||||||||||||||||| |||||||||||    
T  25749740 tctgatactttccgatacgtatcaggagagtatccga 25749776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 1920971 - 1921008
Alignment:
Q  571 cgatacgtatcagaagagtatccgaagattaaatttta 608  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  1920971 cgatacctatcaggagagtatccgaagattaaatttta 1921008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 592
Target Start/End: Complemental strand, 35746352 - 35746271
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatc 592  Q
    ||||| |||||| ||  ||||| ||| |||||| ||||  |||| ||| || ||||||||||||||||||||| ||||||||    
T  35746352 aaaatagatgacgtattgtatctcctacgtatcatgcatcgatacctgcctaatactttccgatacgtatcaggagagtatc 35746271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 595
Target Start/End: Complemental strand, 18001949 - 18001913
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    ||||||||||||||||||||||||  |||||||||||    
T  18001949 tctgatactttccgatacgtatcaagagagtatccga 18001913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 494 - 672
Target Start/End: Original strand, 32424922 - 32425101
Alignment:
Q  494 aagccccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatcc 593  Q
    ||||| || ||||||||||| |||||||| ||||||||||| |||||||| ||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  32424922 aagcctccgatacttcaaaa-tggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgtctgatacttcacgatacgtatcagaagagtatcc 32425020  T
Q  594 gaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||    
T  32425021 gaagattaaattttatttttaaaaaaaataattatccgatacttcccgatatgtatcaggagagtatccgatcattatcct 32425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 36483440 - 36483583
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| ||||||||||| ||     
T  36483440 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaagagtatccaaat 36483538  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||||||||| ||||| ||||||    
T  36483539 attaaattttattttttaaaaaaataattatccgatacgtcccga 36483583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 34901495 - 34901352
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  34901495 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 34901397  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  34901396 attaaattttatttttttaaaaaataattatccgatactttccga 34901352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 22201438 - 22201307
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||| || ||||||||||||     
T  22201438 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatccaaatattaaattttatt 22201339  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||||||||||| ||||||| ||||    
T  22201338 tttttaaaaaataattatccgatactttccga 22201307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 32759390 - 32759521
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  32759390 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaattttatt 32759489  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||||||||||| ||||||| ||||    
T  32759490 tttttaaaaaataattatccgatactttccga 32759521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 511 - 669
Target Start/End: Original strand, 37372276 - 37372437
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || |||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||     
T  37372276 aaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttatt 37372375  T
Q  611 ttttta-aaaaataattatctgatacttccc--gacgtatcaggagagtatccgatcattat 669  Q
    |    | || |||||||||  ||||||||||   |||||||||||||||||||||| |||||    
T  37372376 taaaaataataataattattcgatacttcccaatacgtatcaggagagtatccgataattat 37372437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 12580666 - 12580523
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| | |||||  ||||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| | ||||||||| ||     
T  12580666 ccccgatacttcaaaa-tagatgatgtaccgtatctcctgcgtatcctgcaccgataactgtctgatacttcccgatacgtatccggagagtatccaaat 12580568  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||    
T  12580567 attaaattttatttttttaaaatataattatctgatactttccga 12580523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 16384622 - 16384765
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||| ||||| ||||| |||| ||| | ||||||| |||||||||||| ||||||||||| ||     
T  16384622 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaat 16384720  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||||||||| ||||||| ||||    
T  16384721 attaaattttattttttaaaaaaataattatccgatactttccga 16384765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 514 - 669
Target Start/End: Original strand, 20182394 - 20182550
Alignment:
Q  514 atggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgttt 613  Q
    ||||||||| ||| ||||||| ||| |||| |||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||  |||    
T  20182394 atggatgacgtacggtatcccgtgcatatcctgcact-atatctgtctgatacttttcgatacgtatcagtagagtatctgaagattaaattttaatttt 20182492  T
Q  614 ttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    | |||||||||||| | |||||||||||  |||||||| || |||||| ||| |||||    
T  20182493 taaaaaaataattaaccgatacttcccgatacgtatcaagaaagtatctgataattat 20182550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 510 - 670
Target Start/End: Original strand, 27968119 - 27968283
Alignment:
Q  510 aaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaaga--gtatccgaagattaaatttt 607  Q
    |||||| |||||| ||  |||| |||||| |||| ||||| |||| ||| ||||||||| |||||||||||||| |||  |||||||||||||||| |||    
T  27968119 aaaaatagatgacgtattgtattccctgcatatcctgcaccgatacctggctgatacttcccgatacgtatcaggagatcgtatccgaagattaaagttt 27968218  T
Q  608 atgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    || |||| ||||||||||||||||||||||| ||  || ||||||||||||||||||| ||||||    
T  27968219 attttttaaaaaaataattatctgatacttctcgatacatatcaggagagtatccgataattatc 27968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 510 - 670
Target Start/End: Original strand, 28025105 - 28025269
Alignment:
Q  510 aaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaaga--gtatccgaagattaaatttt 607  Q
    |||||| |||||| ||  |||| |||||| |||| ||||| |||| ||| ||||||||| |||||||||||||| |||  |||||||||||||||| |||    
T  28025105 aaaaatagatgacgtattgtattccctgcatatcctgcaccgatacctggctgatacttcccgatacgtatcaggagatcgtatccgaagattaaagttt 28025204  T
Q  608 atgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    || |||| ||||||||||||||||||||||| ||  || ||||||||||||||||||| ||||||    
T  28025205 attttttaaaaaaataattatctgatacttctcgatacatatcaggagagtatccgataattatc 28025269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 37668587 - 37668730
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||| |||||||||||||||||  ||||||||||||||||| ||||||| |||  | | | ||||| ||     
T  37668587 ccccgatacttcaaaa-tggatgacgtaccgtattccctgcgtatcttgcaccaatatctgtctgatacttcccgatacatatacggataatatccaaat 37668685  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  37668686 attaaattttatttttttaaaaaataattatccgatacgtcccga 37668730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 4245957 - 4246088
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| ||||||||||||||| |||| ||||| |||| ||| | ||||||| |||||||||||| ||||||||||| || ||||||||||||     
T  4245957 aaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaatattaaattttatt 4246056  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| |||||||||||||| ||||| ||||||    
T  4246057 ttttaaaaaaataattatccgatacatcccga 4246088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 45217321 - 45217190
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||||| |||  |||||||||||||||| ||||| |||| ||||| |||| ||||||||||||||| | ||||||||| || ||||||||||||     
T  45217321 aaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagtatccaaatattaaattttatt 45217222  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| |||||||||||||| ||||| ||||||    
T  45217221 ttttaaaaaaataattatccgatacatcccga 45217190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 670
Target Start/End: Original strand, 27886207 - 27886368
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||| |||||| |||| ||||| |||| |||  |||||||| |||||||||||||| ||||||||||||||||||| |||||     
T  27886207 aaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtatccgaagattaaagtttatt 27886306  T
Q  611 tttttaaaaaataattatctgatacttccc--gacgtatcaggagagtatccgatcattatc 670  Q
    |||  |||||||| |||||||||||||| |   || ||||||||||||||||||| ||||||    
T  27886307 tttaaaaaaaatagttatctgatacttctcaatacatatcaggagagtatccgataattatc 27886368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 670
Target Start/End: Original strand, 27944865 - 27945026
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||| |||||| |||| ||||| |||| |||  |||||||| |||||||||||||| ||||||||||||||||||| |||||     
T  27944865 aaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtatccgaagattaaagtttatt 27944964  T
Q  611 tttttaaaaaataattatctgatacttccc--gacgtatcaggagagtatccgatcattatc 670  Q
    |||  |||||||| |||||||||||||| |   || ||||||||||||||||||| ||||||    
T  27944965 tttaaaaaaaatagttatctgatacttctcaatacatatcaggagagtatccgataattatc 27945026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 6028492 - 6028628
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| | ||||||||||||||| |||| | ||||||||| ||     
T  6028492 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagtatccaaat 6028590  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| |||| | ||||||||| || |||||    
T  6028591 attaaattttattttttaagaaaataattttccgatac 6028628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 13422213 - 13422356
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||||||||||||||| |||| ||||| |||| ||| ||||||||| |||||||||||  | ||||||||| ||     
T  13422213 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagtatccaaat 13422311  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| || ||||||||||||||||  |||||| ||||    
T  13422312 attaaattttattttgttaaaaaataattatccaatactttccga 13422356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 498 - 637
Target Start/End: Complemental strand, 43771817 - 43771679
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||  |||| ||||||| | |||||||||| | ||||||||| ||     
T  43771817 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatccaaat 43771719  T
Q  598 attaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||| |||  |||||||||||||| |||||||    
T  43771718 attaaattttatttttaaaaaaaataattatccgatactt 43771679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 498 - 635
Target Start/End: Complemental strand, 2873023 - 2872888
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  2873023 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 2872925  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    || ||||||||| |||||||||||| |||||| |||||    
T  2872924 atgaaattttat-tttttaaaaaatgattatccgatac 2872888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 32877442 - 32877578
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  32877442 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaaat 32877540  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| |||| ||||||||||| || |||||    
T  32877541 attaaattttattttttaaaaaaataattttccgatac 32877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 528 - 672
Target Start/End: Original strand, 38388701 - 38388847
Alignment:
Q  528 gtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatta 627  Q
    |||||| ||||||||| ||||| |||| ||||| |||||||  |||||||| |||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  38388701 gtatcctctgcgtatcctgcaccgatacctgtccgatacttctcgatacgtgtcaggaaagtatccgaagattaaattttatttttttaaaaaacaatta 38388800  T
Q  628 tctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    ||  |||||||| |  || |||||| ||||||| |||| ||||||||    
T  38388801 tccaatacttcctgatacttatcagaagagtattcgataattatcct 38388847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 498 - 635
Target Start/End: Complemental strand, 5818424 - 5818288
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||| | |||||||| ||||| |||| |||  ||||| || |||||| ||||||| |||||||| ||||    
T  5818424 ccccgatacttcaaaa-tggatgacgtatcgtatcacttgcgtatcctgcaccgatacctgcatgatatttcccgatatgtatcaggagagtatctgaag 5818326  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| |||  ||||||||||||||||||||    
T  5818325 attaaattttatttttaaaaaaaataattatctgatac 5818288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 25022130 - 25022266
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||| ||||| |||| ||| | ||||||| | |||||||||| | ||||||||| ||     
T  25022130 ccccaatacttcaaaa-tggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagtatccaaat 25022228  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| |||| | ||||||||| || |||||    
T  25022229 attaaattttattttttaagaaaataattttccgatac 25022266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 29355640 - 29355804
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||||||||| | ||||||||| ||||| ||||  |||| |||  |||||||| |||||||||| ||| ||||||||||||||||||||||||      
T  29355640 aaaatggatgacatatcatatcccctgggtatcctgcatcgatagctgcttgatacttcccgatacgtagcaggagagtatccgaagattaaattttaat 29355739  T
Q  611 tttttaaaaaa-taattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||| |||||| ||||||   |||||||||||  |||||| |||| |||||| ||| ||||||||    
T  29355740 ttttaaaaaaagtaattagtcgatacttcccgatacgtataaggaaagtatctgataattatcct 29355804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 3891979 - 3892145
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaatttta-- 608  Q
    |||||||||||| ||   |||| ||| |||||| ||||| ||||  ||||||||||||||| |||||||||   ||||||| |||||||||||||||       
T  3891979 aaaatggatgacgtattatatctcctacgtatcatgcaccgatacttgtctgatactttccaatacgtatcgagagagtattcgaagattaaatttttgt 3892078  T
Q  609 tgtttttaaaaaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatcctg 673  Q
    | |||||   |||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||    
T  3892079 ttttttttttaaataattatctgatacttctcgatacgtatcaggagagtatccgataattatcctg 3892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 28876679 - 28876535
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||| ||||| |||| ||| | |||||||  |||||||||||   ||||||||| ||     
T  28876679 ccccgatacttcaaaa-tggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatccagagagtatccaaat 28876581  T
Q  598 attaaattttatgtttt-taaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||  |||||||||||||| ||||||| ||||    
T  28876580 attaaattttattttttaaaaaaaataattatccgatactttccga 28876535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 607
Target Start/End: Original strand, 23265666 - 23265762
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaatttt 607  Q
    ||||| || ||||||||||||| |||||||||  ||||||||||||||||  ||| || |||||||||||||| |||||||||||||||||| ||||    
T  23265666 aaaatagacgacataccgtatctcctgcgtattctgcactgatatctgtccaatatttcccgatacgtatcaggagagtatccgaagattaattttt 23265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 548 - 629
Target Start/End: Original strand, 10349298 - 10349379
Alignment:
Q  548 actgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatc 629  Q
    |||||||| ||||||||||||  ||||||||||||| | |||||| |||||||||||||||| ||||||||||| |||||||    
T  10349298 actgatatatgtctgatacttctcgatacgtatcaggaaagtatctgaagattaaattttatttttttaaaaaacaattatc 10349379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 32638957 - 32638836
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| |          ||||||||||| | ||||||||| || ||||||||||||     
T  32638957 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcc----------cgatacgtatccggagagtatccaaatattaaattttatt 32638868  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| |||||||||||||||||||||| ||||    
T  32638867 ttttaaaaaaataattatctgatactttccga 32638836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 561 - 627
Target Start/End: Complemental strand, 24100244 - 24100178
Alignment:
Q  561 tgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatta 627  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  24100244 tgatattttccgatatgtatcaggagagtatccgaagattaaattttaattttttaaaaaataatta 24100178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 545 - 626
Target Start/End: Original strand, 42949181 - 42949262
Alignment:
Q  545 tgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    ||||| ||||||||||||||||||| ||||||||||| | ||||||||| || |||||||||||| |||| | |||||||||    
T  42949181 tgcaccgatatctgtctgatacttttcgatacgtatcgggagagtatccaaatattaaattttattttttaagaaaataatt 42949262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 639
Target Start/End: Original strand, 32764 - 32814
Alignment:
Q  588 gtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcc 639  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32764 gtatccgaagattaaattttat-ttttttaaaaataattatctgatacttcc 32814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 637
Target Start/End: Complemental strand, 30804795 - 30804725
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||     || ||||||||||||||||||||||    
T  30804795 gatactttccgatacgtatcaggagagtatccgaatattaattttt-----ttaaaaaaataattatctgatactt 30804725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 672
Target Start/End: Original strand, 7411726 - 7411782
Alignment:
Q  618 aaaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatcct 672  Q
    |||||||||||| |||||||| |||  | ||||||||||||||||||||||||||||    
T  7411726 aaaataattatccgatacttctcgatacatatcaggagagtatccgatcattatcct 7411782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 576
Target Start/End: Original strand, 19436291 - 19436356
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatac 576  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||| ||| | ||||||| |||||||    
T  19436291 aaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatacttcccgatac 19436356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 576
Target Start/End: Original strand, 19572440 - 19572505
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatac 576  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||| ||| | ||||||| |||||||    
T  19572440 aaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatacttcccgatac 19572505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 637
Target Start/End: Original strand, 40412508 - 40412557
Alignment:
Q  588 gtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    ||||||||| |||||||||||| |||| |||||||||||||| |||||||    
T  40412508 gtatccgaatattaaattttattttttaaaaaaataattatccgatactt 40412557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 637
Target Start/End: Original strand, 12357954 - 12358022
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgttttt-aaaaaataattatctgatactt 637  Q
    |||||||||||||| | ||||||| || |||||||||||| ||||| |||||| ||||||| |||||||    
T  12357954 ccgatacgtatcagcatagtatccaaatattaaattttatttttttaaaaaaacaattatccgatactt 12358022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 637
Target Start/End: Original strand, 12359082 - 12359150
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgttttt-aaaaaataattatctgatactt 637  Q
    |||||||||||||| | ||||||| || |||||||||||| ||||| |||||| ||||||| |||||||    
T  12359082 ccgatacgtatcagcatagtatccaaatattaaattttatttttttaaaaaaacaattatccgatactt 12359150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 602
Target Start/End: Complemental strand, 19948097 - 19948006
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaa 602  Q
    |||||||||||| || | ||||||||||||||| ||||| |||| |||   ||||||| |||||||||| | | ||||||||| || |||||    
T  19948097 aaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgctcgatacttcccgatacgtaccgggagagtatccaaatattaa 19948006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 621
Target Start/End: Complemental strand, 27109215 - 27109165
Alignment:
Q  571 cgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaa 621  Q
    |||||||||||||||||||||  ||||||||  |||||| |||||||||||    
T  27109215 cgatacgtatcagaagagtatttgaagattattttttatttttttaaaaaa 27109165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 7e-51; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 2319280 - 2319456
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||| ||||  ||  |||||||| | ||||||||||||||||||||||||||    
T  2319280 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcttgcaccgatacttgcttgatacttcctgatacgtatcagaagagtatccgaag 2319378  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||  |||||||||||||||||||||| |||||||||    
T  2319379 attaaattttatttttttaaaaaataattatccgatacgtcccgatacgtatcaggagagtatccgataattatcctg 2319456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 8483018 - 8482854
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||| ||||| || |||||||  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8483018 aaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatt 8482919  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||||||| |||||||| ||  || |||||| |||| ||||||| |||||||||    
T  8482918 tttttaaaaaataattatccgatacttcgcgatacatatcagaagagcatccgataattatcctg 8482854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 35342334 - 35342498
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||| ||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||     
T  35342334 aaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatacttcccgatacgtatcaaaagagtatccgaagattaaattttatt 35342433  T
Q  611 ttt-ttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||   ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35342434 tttaaaaaaaaataattatctgatacttcccgatacgtatcaggagagtatccgatcattatcct 35342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 44156602 - 44156779
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||  ||||  |||||||||||| |||||||||||||| |||||||||||||    
T  44156602 ccccgatacttcaaaa-tggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatccgaag 44156700  T
Q  598 attaaatttta-tgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||| | ||||||||||||||||||| ||||||||| |  |||||||||||  ||||||||| |||||||||    
T  44156701 attaaattttattttttttaaaaaataattatccgatacttcctgatacgtatcaggatggtatccgataattatcctg 44156779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 21104499 - 21104662
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||||| | |||||||||||||||||||| ||      
T  21104499 aaaatggatgacgtatcgtatcctctgcgtatcttgcaccgatatctgtctgatatttcccgatacgtatcaaaggagtatccgaagattaaattatact 21104598  T
Q  611 tttttaaaaaataattatctgatacttccc--gacgtatcaggagagtatccgatcattatcct 672  Q
    ||||| ||||||||||||| |||| |||||   ||||||||||| |||||||||||||||||||    
T  21104599 ttttttaaaaataattatccgatatttccctatacgtatcaggaaagtatccgatcattatcct 21104662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 511 - 670
Target Start/End: Original strand, 4561805 - 4561967
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||| || || ||||| ||||| |||| ||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  4561805 aaaatggatgacgtatcgtattccttgtgtatcctgcaccgatacctgcccgatacttcccgatacatatcagaagagtatccgaagattaaattttatt 4561904  T
Q  611 ttttt-aaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  4561905 tttttaaaaaaataattatctgatacttcccgatacgtatcaggagagtatccgataattatc 4561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 669
Target Start/End: Original strand, 34146197 - 34146357
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||  ||||||||  ||||| |||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||     
T  34146197 aaaatggatgacgtatcgtatcttctgcgtattctgcaccgatatctgcctgatacttcccgatacgtatcaggagagtatccaaagattaaattttatt 34146296  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    |||  |||||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  34146297 tttaaaaaaaataattatccgatacttcctgatacgtatcaggagagtatccgataattat 34146357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 560 - 673
Target Start/End: Original strand, 3563906 - 3564021
Alignment:
Q  560 ctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagta 657  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||| ||||||    
T  3563906 ctgatacttcccgatacgtatcaggagagtatccgaagattaaattttatttctttaaaaaataattatctgatacttcccgatacgtatcagaagagta 3564005  T
Q  658 tccgatcattatcctg 673  Q
    |||||| |||||||||    
T  3564006 tccgataattatcctg 3564021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 528 - 663
Target Start/End: Original strand, 35996677 - 35996813
Alignment:
Q  528 gtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatta 627  Q
    |||||||||||||||||||||| |||| ||||  |||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  35996677 gtatcccctgcgtatcttgcaccgatacctgttcgatacttttcgatacgtatcaggagagtattcgaagattaaattttat-tttttaaaaaataatta 35996775  T
Q  628 tctgatacttcccg--acgtatcaggagagtatccgat 663  Q
    || |||||||||||  ||||||||||| ||||| ||||    
T  35996776 tccgatacttcccgatacgtatcaggaaagtattcgat 35996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 1005530 - 1005693
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||     
T  1005530 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgtc-gatacttcccgatacgtattagaagagtatctgaagattaaattttatt 1005628  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    | |||   ||||||||||||||||||||| |  ||||||||| |||||||| ||| |||||||||    
T  1005629 tattttttaaataattatctgatacttcctgatacgtatcagaagagtatctgataattatcctg 1005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 503 - 609
Target Start/End: Complemental strand, 40497494 - 40497388
Alignment:
Q  503 atacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaa 602  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  40497494 atactttaaaaatggatgacgtaccttatcccctgcgtatcttgcagtgatacctgtctgatacttcccgatacgtatcaggagagtatccaaagattaa 40497395  T
Q  603 attttat 609  Q
    |||||||    
T  40497394 attttat 40497388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 635
Target Start/End: Complemental strand, 6497750 - 6497626
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||||| | ||||||||| || ||||||||||||     
T  6497750 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtatccaaatattaaattttatt 6497651  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    |||| |||||||||||||| |||||    
T  6497650 ttttaaaaaaataattatccgatac 6497626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 7876719 - 7876862
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  7876719 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 7876817  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||||||||| ||||||| ||||    
T  7876818 attaaattttattttttaaaaaaataattatccgatactttccga 7876862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 14217255 - 14217087
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||||||||||||||  ||||| ||||||||| ||||||||||||||||||||| | ||||||||  ||||||||||||| |     
T  14217255 aaaatggatgacgtattgtatcccctgcgtattctgcaccgatatctgtttgatactttccgatacgtatctggagagtatctaaagattaaattttttt 14217156  T
Q  611 tttttaa----aaaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatcctg 673  Q
    |||||      |||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||||    
T  14217155 tttttttttttaaaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctg 14217087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 22484272 - 22484415
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||  |||||||| ||||||||||| ||||  |||||||||| ||||||| |||||||||||| | ||||||||| ||     
T  22484272 ccccgatacttcaaaa-tggatgatgtaccgtattccctgcgtatcctgcatcgatatctgtccgatacttcccgatacgtatccggagagtatccaaat 22484370  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  22484371 attaaattttatttttttaaaaaataattatccgatacatcccga 22484415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 498 - 637
Target Start/End: Complemental strand, 38602435 - 38602297
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  38602435 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 38602337  T
Q  598 attaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||| |||  ||||||||||||||||||||||    
T  38602336 attaaattttatttttaaaaaaaataattatctgatactt 38602297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 635
Target Start/End: Complemental strand, 4170603 - 4170479
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  4170603 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagtatccaaatattaaattttatt 4170504  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    |||  |||||||||||||| |||||    
T  4170503 tttaaaaaaaataattatccgatac 4170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 668
Target Start/End: Complemental strand, 28746765 - 28746598
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| || ||||||||||||||||| ||||| |||| ||| | |||||||| |||||||||||||||||||||||||||    
T  28746765 ccccgatacttcaaaa-tggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttttcgatacgtatcagaagagtatccgaag 28746667  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatta 668  Q
    ||||| |||| | ||||    ||||||||||| |||||||||||  |||||||| || |||||||||| ||||    
T  28746666 attaatttttttttttt----aaataattatccgatacttcccgatacgtatcaagaaagtatccgataatta 28746598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 672
Target Start/End: Complemental strand, 31236287 - 31236124
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||| || ||  |||||||||||||||| |||||  | | |||  ||||| || |||||||||||||| ||||||||||||||||||||||||      
T  31236287 aaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggagagtatccgaagattaaattttaat 31236188  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    ||||||||||||||| | | |||||||||||  |||||||||||||||||| ||| ||||||||    
T  31236187 tttttaaaaaataatcagccgatacttcccgatacgtatcaggagagtatctgataattatcct 31236124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 33324823 - 33324966
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  33324823 ccccgatacttcaaaa-tggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 33324921  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||    
T  33324922 attaaattttatttttaaaaaaaataattatctgatactttccga 33324966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 498 - 673
Target Start/End: Complemental strand, 1776549 - 1776373
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| || |||||||| |||||||  ||||| |||| ||| | |||  |||||||||||||||||||||||||||||||    
T  1776549 ccccgatacttcaaaa-tggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgatcatttccgatacgtatcagaagagtatccgaag 1776451  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| |||| |||||| ||| ||  |||||||||||  ||||||||| | |||||| ||| |||||||||    
T  1776450 attaaattttattttttaaaaaaaaaatcattcgatacttcccgatacgtatcagaaaagtatctgataattatcctg 1776373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 7807487 - 7807344
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||||||||||||||||| || |||| ||||  ||||||| |||||||||||| | | ||||||| ||     
T  7807487 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagtatccaaat 7807389  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||||||||||||| |||| ||||||| ||||    
T  7807388 attaaattttatttttttaaaaaataactatccgatactttccga 7807344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 4355342 - 4355473
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||| ||||||||||  ||||| |||| |||  |||||||| |||||||||||||| ||||||| | |||||||||||||||     
T  4355342 aaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagtatgcaaagattaaattttatt 4355441  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| ||||| |||||||| ||||||||||||    
T  4355442 ttttaaaaaactaattatccgatacttcccga 4355473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 498 - 637
Target Start/End: Complemental strand, 40309010 - 40308872
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| | |||||| ||||||||||| |||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  40309010 ccccgatacttcaaaa-tagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 40308912  T
Q  598 attaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||| |||  |||||||||||||| |||||||    
T  40308911 attaaattttatttttaaaaaaaataattatccgatactt 40308872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 572 - 673
Target Start/End: Original strand, 14824216 - 14824320
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttatgtt-tttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatta 668  Q
    |||||||||||||||||||||||||||||||||||||| ||    |||||||||||||| |||| ||||||  |||||||||||||||||||||| ||||    
T  14824216 gatacgtatcagaagagtatccgaagattaaattttattttaaaaaaaaaataattatccgatatttcccgatacgtatcaggagagtatccgataatta 14824315  T
Q  669 tcctg 673  Q
    |||||    
T  14824316 tcctg 14824320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 25933582 - 25933699
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||  || ||||||||||||||||| |||||  |||||| ||||||||||  ||||||  ||||| |||||||||||||||||||||| ||     
T  25933582 aaaatggatgatgtatcgtatcccctgcgtatcatgcaccaatatctatctgatacttctcgatacagatcaggagagtatccgaagattaaatttaatt 25933681  T
Q  611 tttttaaaaaataattat 628  Q
    |||| |||||||||||||    
T  25933682 ttttgaaaaaataattat 25933699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 626
Target Start/End: Original strand, 16561805 - 16561932
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||||||||||| |||||||  ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  16561805 ccccgatacttcaaaa-tggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 16561903  T
Q  598 attaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| |||||| |||||||||    
T  16561904 attaaattttatttttttataaaataatt 16561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 6124190 - 6124316
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||||||||| ||||| ||||| ||||  |||| ||||||| | |||||||||| | ||||||||| || ||||||||||||     
T  6124190 aaaatggatgacgtattgtatcccctgtgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatccaaatattaaattttatt 6124289  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||| |||||||||||||| |||||||    
T  6124290 ttttaaaaaaataattatccgatactt 6124316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 609
Target Start/End: Complemental strand, 37134399 - 37134301
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||| |||||| |||||||||| ||||||||| ||||||||||||||  |||||||| |||||||||||||  |||||||  ||||||||||||||||    
T  37134399 aaaatagatgacgtaccgtatcctctgcgtatcctgcactgatatctgcttgatacttcccgatacgtatcaagagagtatatgaagattaaattttat 37134301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 511 - 626
Target Start/End: Original strand, 18300989 - 18301104
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||| ||||  ||||| |||| |||||||||||||  ||||||||||| | ||||||||| || ||||||||||||     
T  18300989 aaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagtatccaaatattaaattttatt 18301088  T
Q  611 tttttaaaaaataatt 626  Q
    |||| | |||||||||    
T  18301089 ttttaagaaaataatt 18301104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 12206042 - 12206205
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||  ||| ||||||||||  |||| ||| |||||| ||| | ||||||||||| ||||||| |||||||||||||||||     
T  12206042 aaaatggatgacgtatcgtatcatctgtgtatcttgcatcgatacctgcctgatatttttcaatacgtatcaggagagtattcgaagattaaattttat- 12206140  T
Q  611 tttttaaaaaataattatctgat--acttcccgacgtatcaggagagtatccgatcattatcctg 673  Q
    ||   ||| |||||||||| |||  | |||   |||||||| ||||||||||||| |||||||||    
T  12206141 ttaaaaaataataattatccgataaatttcgatacgtatcatgagagtatccgataattatcctg 12206205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 607
Target Start/End: Original strand, 24585535 - 24585642
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||  || |||||||| |||||||| ||||| |||| ||||||||||||| | |||||||||||| || |||||| |||    
T  24585535 ccccgatacttcaaaa-tggatgatgtatcgtatccc-tgcgtatcctgcaccgatacctgtctgatacttccagatacgtatcaggagtgtatccaaag 24585632  T
Q  598 attaaatttt 607  Q
    ||||| ||||    
T  24585633 attaattttt 24585642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 511 - 670
Target Start/End: Complemental strand, 3545682 - 3545520
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||   | |||||  ||||| ||||  ||||||||||||  ||||| ||||||| |||| ||||||||||||||||||||     
T  3545682 aaaatggatgacgtatcgtatcttttacgtattctgcaccgatacttgtctgatacttctcgatatgtatcaggagagcatccgaagattaaattttatt 3545583  T
Q  611 tttttaaaa-aataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    ||   |||| |||||||||| ||| |||||||  || ||||| ||||||||| ||| ||||||    
T  3545582 ttaaaaaaataataattatcagatgcttcccgatacatatcaagagagtatctgataattatc 3545520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 609
Target Start/End: Original strand, 22570954 - 22571052
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||| |||||| |||||||||| ||||||||| ||||| |||| ||| | ||||||| | |||||||||| |  |||||||| || ||||||||||||    
T  22570954 aaaatagatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggggagtatccaaatattaaattttat 22571052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 639
Target Start/End: Complemental strand, 33738205 - 33738107
Alignment:
Q  539 gtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttc 638  Q
    ||||| ||||||||||| |||||||||  | |||||||||||||||  ||||| |||  |||||||||||  |||  |||||||||||||| ||||||||    
T  33738205 gtatcctgcactgatatatgtctgataagtcccgatacgtatcagagaagtattcgataattaaatttta--tttaaaaaaaataattatccgatacttc 33738108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 45159411 - 45159279
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||||| ||||||||||||||  ||||||| |          ||||||||||| ||||||||| ||||     
T  45159411 ccccgatacttcaaaa-tggatgacgtatcgtatcccttgcgtatcttgcaccaatatctgcc----------cgatacgtatctgaagagtattcgaat 45159323  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||| ||||| ||||||| ||||    
T  45159322 attaaattttat-ttttaaaaaaatacttatccgatactttccga 45159279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 602
Target Start/End: Original strand, 43214589 - 43214682
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatac--gtatcagaagagtatccgaagattaa 602  Q
    |||||||||||| || |||||||| || ||||| ||||  |||||||| | ||||||| |||||||   |||||| ||||||||||||||||||    
T  43214589 aaaatggatgacgtatcgtatcccatgtgtatcctgcatcgatatctgaccgatacttcccgatacatatatcaggagagtatccgaagattaa 43214682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 669
Target Start/End: Original strand, 9293216 - 9293282
Alignment:
Q  595 aagattaaattttatgtttttaaaaaataattatctgatacttcccgacgtatcaggagagtatccgatcattat 669  Q
    ||||||| ||||||| |||||||||||||||||||||||        |||||||||||||||||| |||||||||    
T  9293216 aagattatattttatttttttaaaaaataattatctgat--------acgtatcaggagagtatctgatcattat 9293282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 595
Target Start/End: Original strand, 3563974 - 3564010
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3563974 tctgatacttcccgatacgtatcagaagagtatccga 3564010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 642
Target Start/End: Original strand, 20536841 - 20536913
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||| || |||||||||||| |||  ||||||||| | || ||||| ||||||    
T  20536841 ccgatacgtatcggaagagtatccaaatattaaattttatttttaaaaaaaataaatttccgatacgtcccga 20536913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 593
Target Start/End: Original strand, 5588124 - 5588206
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatcc 593  Q
    |||||||||||| || ||||||| ||  ||||||||||| |||| |||||| |||||| | ||||| |||||  |||||||||    
T  5588124 aaaatggatgacgtatcgtatcctctttgtatcttgcaccgatacctgtctcatacttcctgatacatatcatgagagtatcc 5588206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 587 - 669
Target Start/End: Original strand, 10573587 - 10573671
Alignment:
Q  587 agtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcc--cgacgtatcaggagagtatccgatcattat 669  Q
    |||||| ||| |||||||||||| ||||||||||| ||||||   ||||||||    ||||||| |||||||||||||| |||||    
T  10573587 agtatctgaaaattaaattttatttttttaaaaaagaattattcaatacttccatatacgtatctggagagtatccgataattat 10573671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 570 - 642
Target Start/End: Original strand, 40536308 - 40536381
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtt-tttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||||||||| ||  |||||||||||| || |||   ||||||||||| ||||||||||||    
T  40536308 ccgatacgtatcggaagagtatcagatcattaaattttattttattttttaaataattatccgatacttcccga 40536381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089 (Bit Score: 94; Significance: 2e-45; HSPs: 4)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 309 - 438
Target Start/End: Complemental strand, 753 - 625
Alignment:
Q  309 aaatgaaggtatcaactgagagagcatatataatatggatagacttagaggaagcacaacaacaagatattaatgatgaagtttggtttggtaagaaaat 408  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  753 aaatcaaggtatcaactgactgagcatatataatatggatagacttagaggaagcacaacaacgagatagtaatgataaagtttgg-ttggtaagaaaat 655  T
Q  409 gaatgagatgatgtaccttttgttatcaac 438  Q
     |||||||||||||||||||||||||||||    
T  654 aaatgagatgatgtaccttttgttatcaac 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1002 - 928
Alignment:
Q  1 tacctgtaagtgtgagaacaaacaagctaagatctttgtcnnnnnnnccaccaaactgagatctgccaaggaaat 75  Q
    |||||| |||||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||||    
T  1002 tacctgaaagtgtgagaacaaacaaactaagatctttgtaaaaaaaaccaccaaactgagatctgccaaggaaat 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 923 - 877
Alignment:
Q  100 aaaatatgtgaaatatgaaatttgagtaacaacggaaataaagagta 146  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||    
T  923 aaaaaatgtgaaatatgaaatttgagtaacaacgtaaattaagagta 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 815 - 765
Alignment:
Q  261 tctgccaaagatagacttaagaggaagcaatgcaagatatcaatgatgaaat 312  Q
    |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  815 tctggcaaagaaagactta-gaggaagcaatccaagatatcaatgatgaaat 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 669
Target Start/End: Complemental strand, 44960236 - 44960076
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| |||||||| | ||||||||||||| |||||| ||||||||||||||||| |||||||||||||||     
T  44960236 aaaatggatgacgtatcgtatcccctgcgtatcctgcactgacacctgtctgatacttcccgatatgtatcagaagagtatccaaagattaaattttatt 44960137  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    ||||  ||||||||||||| |||||||||||  || ||||||| ||||||||||| |||||    
T  44960136 ttttgtaaaaataattatcggatacttcccgatacatatcaggggagtatccgataattat 44960076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 529 - 673
Target Start/End: Complemental strand, 23970209 - 23970063
Alignment:
Q  529 tatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattat 628  Q
    ||||||||||||||| ||||  |||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||     
T  23970209 tatcccctgcgtatcatgcatcgatatctgtctgatacttcctgatacgtattagaagagtatctgaagattaaattttattttcttaaaaaataattac 23970110  T
Q  629 ctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    | ||||||| |||  |||||||||||||||||||||| |||||||||    
T  23970109 ccgatactttccgatacgtatcaggagagtatccgataattatcctg 23970063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 640
Target Start/End: Original strand, 33454084 - 33454213
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||||||||| |||| |||||||  ||||||||||||| | |||||||||||||||||||||||     
T  33454084 aaaatggatgacgtatcgtatcccctgcgtatcctgcactgatatatgtcagatacttctcgatacgtatcaggaaagtatccgaagattaaattttatt 33454183  T
Q  611 tttttaaaaaataattatctgatacttccc 640  Q
    |||| |||||||||||| ||||||||||||    
T  33454184 ttttaaaaaaataattagctgatacttccc 33454213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 40095652 - 40095795
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  40095652 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 40095750  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  40095751 attaaattttatttttttaaaaaataattatccgatactttccga 40095795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 510 - 672
Target Start/End: Original strand, 21409404 - 21409567
Alignment:
Q  510 aaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||||||| || |||||| ||||  |||| |||||||||| ||| ||||||| | |||||||||||||| ||||||||| |||||||||||||||    
T  21409404 aaaaatggatgacgtatcgtatctcctgtatatcctgcactgatacctgcctgatacatcccgatacgtatcaggagagtatccaaagattaaattttat 21409503  T
Q  610 gtttttaaaaaataattatctgatacttcc--cgacgtatcaggagagtatccgatcattatcct 672  Q
     ||||| ||||||||||||| |||||||||    |||||||||||||||||| ||| ||||||||    
T  21409504 -ttttttaaaaataattatcggatacttcctaatacgtatcaggagagtatctgataattatcct 21409567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 11829691 - 11829834
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| ||||||||| || ||||||||| | ||||||||| ||     
T  11829691 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagtatccaaat 11829789  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||| ||||||| ||||    
T  11829790 attaaattttatttttaaaaaaaataattatccgatactttccga 11829834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 27353923 - 27354066
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  27353923 ccccgatacttcaaaa-tggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 27354021  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  27354022 attaaattttatttttttaaaaaataattatccgatactttccga 27354066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 38263001 - 38263144
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||| | ||||||||| ||||  |||| ||| | |||||||||||||||||||| | ||||||||| ||     
T  38263001 ccccgatacttcaaaa-tggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggagagtatccaaat 38263099  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  38263100 attaaattttatttttttaaaaaataattatctgatactttccga 38263144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 48163410 - 48163553
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  48163410 ccccgatacttcaaaa-tgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 48163508  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  48163509 attaaattttatttttttaaaaaataattatccgatactttccga 48163553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 514 - 669
Target Start/End: Original strand, 44269743 - 44269899
Alignment:
Q  514 atggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgttt 613  Q
    ||||||||| ||| ||||||| ||| |||| |||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||  |||    
T  44269743 atggatgacgtacggtatcccgtgcatatcctgcact-atatctgtctgatacttttcgatacgtatcagtagagtatctgaagattaaattttaatttt 44269841  T
Q  614 ttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    | |||||||||||| | |||||||||||  |||||||| || |||||| ||| |||||    
T  44269842 taaaaaaataattaaccgatacttcccgatacgtatcaagaaagtatctgataattat 44269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 527 - 673
Target Start/End: Original strand, 40041409 - 40041556
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||| ||| |||||| || |||||||  ||||||||||||   |||||||||||| ||||||||||||||||||||||||| |||  |||||||||||    
T  40041409 cgtatctcctacgtatcctgtactgatacatgtctgatacttcttgatacgtatcaggagagtatccgaagattaaattttat-tttaaaaaaaataatt 40041507  T
Q  627 atctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||| |||| ||||||  |||||||||||||||||||||| |||||||||    
T  40041508 atccgatatttcccgatacgtatcaggagagtatccgataattatcctg 40041556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 16850800 - 16850931
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||| ||||| ||||| ||||| ||||  || | |||||||||||||||||||| ||||||||||| || ||||||||||||     
T  16850800 aaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaagagtatccaaatattaaattttatt 16850899  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| |||||||||||||| ||||||| ||||    
T  16850900 ttttaaaaaaataattatccgatactttccga 16850931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 510 - 637
Target Start/End: Original strand, 23311735 - 23311862
Alignment:
Q  510 aaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||| |||||  ||||||||||| || ||||| ||||| ||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  23311735 aaaaatagatgatgtaccgtatcccatgtgtatcctgcaccgatatatgtctgatacttcccgatatgtatcaggagagtatccgaagattaaattttat 23311834  T
Q  610 gtttttaaaaaataattatctgatactt 637  Q
     ||||| ||||| |||||||| ||||||    
T  23311835 tttttttaaaaacaattatctaatactt 23311862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 27555470 - 27555339
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||| | ||||||||  ||||| |||| ||||| ||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  27555470 aaaatggatgacgtaccgtattctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtatccaaatattaaattttatt 27555371  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||||||||||| ||||||| ||||    
T  27555370 tttttaaaaaataattatccgatactttccga 27555339  T

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Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 663
Target Start/End: Original strand, 35159879 - 35160033
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||  || |||||||||||| |||  ||||| ||||  ||||| |||||| |||||||||||||| |||||||||||||||||||||||||     
T  35159879 aaaatggatgatgtatcgtatcccctgcatattctgcaccgatacttgtctaatacttcccgatacgtatcaggagagtatccgaagattaaattttatt 35159978  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgat 663  Q
    ||   ||||||||||||||||||| ||||||  || |||||| ||||||||||||    
T  35159979 ttaaaaaaaaataattatctgatagttcccgatacatatcagaagagtatccgat 35160033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 662
Target Start/End: Original strand, 38064609 - 38064763
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||||||||| |||||| | |||||||| |||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||| |||     
T  38064609 aaaatggatgacataacgtatctcatgcgtatcatgcactgatacctgaccgatactttccgatacgtatcaggagagtatccgaagattaaattatatt 38064708  T
Q  611 t--ttttaaaaaataattatctgatacttcc-cgacgtatcaggagagtatccga 662  Q
    |  ||||  | || |||||||||||||||||   |||||||| ||||||||||||    
T  38064709 ttattttttataaaaattatctgatacttccgatacgtatcaagagagtatccga 38064763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 572 - 673
Target Start/End: Complemental strand, 554930 - 554827
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||  | |||||||||||||||||||| |||||    
T  554930 gatacgtatcaggagagtattcgaagattaaattttattttttttaaaaataattatccgatacttcccgataagtatcaggagagtatccgataattat 554831  T
Q  670 cctg 673  Q
    ||||    
T  554830 cctg 554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 34238160 - 34238303
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||  ||||| |||| ||| | |||||||||||||||||||  | ||||||||| ||     
T  34238160 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagtatccaaat 34238258  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||| ||||||| ||||    
T  34238259 attaaattttatttttaaaaaaaataattatccgatactttccga 34238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 11058366 - 11058490
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||  | |||||||| ||  |||||||||||      
T  11058366 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgtctgatactttcagatacgtattgggagagtatcagattattaaatttta-- 11058463  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||  ||||||||| ||||||||||||    
T  11058464 tttaaaaaaaataagtatctgatactt 11058490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 34122718 - 34122587
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  34122718 aaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaattttatt 34122619  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||| |||||||||||||  |||| ||||||    
T  34122618 ttttttaaaaataattatccaatacatcccga 34122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 494 - 673
Target Start/End: Original strand, 24956249 - 24956429
Alignment:
Q  494 aagccccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatcc 593  Q
    |||||||  ||||||||||| || ||||| || |||||||||| | |||| |||| |||||  || |||||||||||||||||||||||  |||||||||    
T  24956249 aagccccagatacttcaaaattg-atgacgtatcgtatcccctacatatcatgcattgatacatgcctgatactttccgatacgtatcaagagagtatcc 24956347  T
Q  594 gaagattaaattttatgtttttaaaaaataattatctgatacttcc--cgacgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||||||| ||    ||||||||||||| |||||||||    |||||||| ||||||||| ||| |||||||||    
T  24956348 gaagattaaattttattttaaagaaaaataattatccgatacttcctaatacgtatcaagagagtatctgataattatcctg 24956429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 498 - 635
Target Start/End: Complemental strand, 1043184 - 1043048
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| ||||  |||| ||| |||||||||||||||||||||| | ||||||||| ||     
T  1043184 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatccaaat 1043086  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| |||| | ||||||||| || |||||    
T  1043085 attaaattttattttttaagaaaataattttccgatac 1043048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 25969399 - 25969543
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  25969399 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 25969497  T
Q  598 attaaatttta-tgtttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||| | |||||| |||||||||||| ||||||| ||||    
T  25969498 attaaattttattttttttataaaataattatccgatactttccga 25969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 9250523 - 9250390
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  9250523 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaattttatt 9250424  T
Q  611 tttttaa--aaaataattatctgatacttcccga 642  Q
    ||||| |  |||||||||||| ||||||| ||||    
T  9250423 ttttttattaaaataattatccgatactttccga 9250390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 635
Target Start/End: Complemental strand, 27398148 - 27398024
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||| |||||||||||||||| |||||||||| |||   |||||||||| ||| ||||| | ||||||||| || ||||||||||||     
T  27398148 aaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatccaaatattaaattttatt 27398049  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    |||  |||||||||||||| |||||    
T  27398048 tttaaaaaaaataattatccgatac 27398024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 600 - 672
Target Start/End: Complemental strand, 1400280 - 1400206
Alignment:
Q  600 taaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1400280 taaattttattttttttaaaaataattatctgatacttcccgatacgtatcaggagagtatccgatcattatcct 1400206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 652
Target Start/End: Original strand, 26973116 - 26973210
Alignment:
Q  560 ctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcagga 652  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| | |||||   ||||||||||| |||||||||||  |||||||||||    
T  26973116 ctgatacttttcgatacgtatcagaagagtatccgaagattaaatttttttttttttttaaataattatccgatacttcccgatacgtatcagga 26973210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 637
Target Start/End: Complemental strand, 18114040 - 18113914
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||| ||||| ||  ||||| ||||| |||||||| ||||||||| | |||| ||||||| |||||||| ||||||||||||||||     
T  18114040 aaaatggatgacgtaccatatcctctatgtatcctgcaccgatatctgcctgatacttcctgatatgtatcaggagagtatctgaagattaaattttatt 18113941  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||  ||||||||| |||| |||||||    
T  18113940 tttaaaaaaaataagtatccgatactt 18113914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 637
Target Start/End: Complemental strand, 26773813 - 26773687
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| || |||||||| |||||||| ||||| |||||||| | |||||||  ||||||||||| | ||||||||| || ||||||||||||     
T  26773813 aaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcgggagagtatccaaatattaaattttatt 26773714  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||| | ||||||||| ||||||||||    
T  26773713 ttttaagaaaataattttctgatactt 26773687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 637
Target Start/End: Complemental strand, 49015167 - 49015045
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||||||||||||| | || ||||| | ||| |||| ||||||||     ||||||||||||||||||||||||| | |||||||||||||     
T  49015167 aaaatggatgacataccgtatctcatgtgtatcatacaccgatacctgtctgaa----tccgatacgtatcagaagagtatccaacgattaaattttatt 49015072  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    ||||| ||||| ||||||| |||||||    
T  49015071 ttttttaaaaacaattatccgatactt 49015045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 614
Target Start/End: Complemental strand, 8056431 - 8056332
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||||||||||  ||||||||||| || |||    ||||| |||||||||||||||||||| |||||||| ||||||||||||||||     
T  8056431 aaaatggatgacgtaccgtatcctttgcgtatcttgtaccgat----gtctggtactttccgatacgtatcaggagagtatctgaagattaaattttatt 8056336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 642
Target Start/End: Complemental strand, 36202892 - 36202758
Alignment:
Q  497 ccccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaa 596  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||  ||| |          ||||||||||| | ||||||||| ||    
T  36202892 cccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctgcc----------cgatacgtatccggagagtatccaaa 36202804  T
Q  597 gattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
     |||||||||||| ||||||||||||||||||||||||||| ||||    
T  36202803 tattaaattttatttttttaaaaaataattatctgatactttccga 36202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 42897004 - 42897136
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||           ||| |||||||||||| | ||||||||| ||     
T  42897004 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgata-----------cttcccgatacgtatccggagagtatccaaat 42897091  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  42897092 attaaattttatttttttaaaaaataattatccgatactttccga 42897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 572 - 670
Target Start/End: Original strand, 21179911 - 21180011
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    |||| ||||||| ||||||||||||||||||||||||| ||   ||| |||||||||| |||||||||||  |||||||||||||||||| ||| |||||    
T  21179911 gatatgtatcaggagagtatccgaagattaaattttattttaaaaaataataattatccgatacttcccgatacgtatcaggagagtatctgataattat 21180010  T
Q  670 c 670  Q
    |    
T  21180011 c 21180011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 564 - 641
Target Start/End: Complemental strand, 47720220 - 47720143
Alignment:
Q  564 tactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg 641  Q
    ||||| |||||||||||| | |||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||    
T  47720220 tacttcccgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatacgtcccg 47720143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 621
Target Start/End: Complemental strand, 1363095 - 1363003
Alignment:
Q  529 tatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaa 621  Q
    ||||||||| ||||||||||||||||  ||  ||||||||  ||||||||||||| |||||||||||| || ||||||||| |||||||||||    
T  1363095 tatcccctgtgtatcttgcactgatacatgcttgatacttctcgatacgtatcaggagagtatccgaatatgaaattttatttttttaaaaaa 1363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 26845997 - 26845866
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||  ||||||||| | |||||||| ||||| |||| ||| |  |||||| |||||||||||  | ||||||||| || ||||||||||||     
T  26845997 aaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatacctgcccaatacttcccgatacgtatttggagagtatccaaatattaaattttatt 26845898  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||  |||||||||||||| ||||||| ||||    
T  26845897 tttaaaaaaaataattatccgatactttccga 26845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 39520802 - 39520934
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||           ||| |||||||||||| | ||||||||| ||     
T  39520802 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgata-----------cttcccgatacgtatccggagagtatccaaat 39520889  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||||    
T  39520890 attaaattttattttttttaaaaataattatccgatacatcccga 39520934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 595
Target Start/End: Complemental strand, 23079153 - 23079057
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| || |  |||| ||  | ||||||| |||||||||||||| |||||||||||    
T  23079153 ccccgatacttcaaaa-tggatgacataccgtatcccctgcgtatcctggatcgatacctacccgatacttcccgatacgtatcaggagagtatccga 23079057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 38064728 - 38064843
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttccc--gacgtatcaggagagt 656  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||| |||| ||| || ||||||| |||| |||||   ||||||| |||| ||    
T  38064728 tctgatactt-ccgatacgtatcaagagagtatccgaagattaaattttattttttaaaataaaaattatcagatatttcccaatacgtatctggagggt 38064826  T
Q  657 atccgatcattatcctg 673  Q
    ||| ||| |||||||||    
T  38064827 atctgataattatcctg 38064843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 4291526 - 4291596
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatc 581  Q
    |||||||||||  |||||||||||||||||||| ||||| |||| ||||| ||||||| ||||||||||||    
T  4291526 aaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatc 4291596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 637
Target Start/End: Original strand, 7416689 - 7416754
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||| ||||||||||||||||||||||||| || ||  |||| |||||||||||||||    
T  7416689 gatacgtatcaggagagtatccgaagattaaattttattttattttaaaacaattatctgatactt 7416754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 626
Target Start/End: Original strand, 19510525 - 19510652
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||| ||||| ||||||||||  || | ||||||| | |||| ||||| |  |||||||| ||     
T  19510525 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgtgtatcatgcactgatacatgcccgatacttcctgatatgtatcgggtgagtatccaaat 19510623  T
Q  598 attaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| |||| | |||||||||    
T  19510624 attaaattttattttttaagaaaataatt 19510652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 608
Target Start/End: Complemental strand, 19820914 - 19820868
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaatttta 608  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19820914 gatactttccgatatgtatcaggagagtatccgaagattaaatttta 19820868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 662
Target Start/End: Complemental strand, 19820974 - 19820881
Alignment:
Q  571 cgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccga 662  Q
    |||||||||| | |||||||||  ||||||||||||||| ||   |||||||||||||| ||||||| |||  | |||||||||||||||||||    
T  19820974 cgatacgtattaaaagagtatctaaagattaaattttattttaaaaaaaaataattatccgatactttccgatatgtatcaggagagtatccga 19820881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 629
Target Start/End: Complemental strand, 47238659 - 47238600
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatc 629  Q
    |||||| ||||| | ||||||||| || |||||||||||| |||||||||||||||||||    
T  47238659 ccgatatgtatctggagagtatccaaatattaaattttatttttttaaaaaataattatc 47238600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 609
Target Start/End: Complemental strand, 27688051 - 27688013
Alignment:
Q  571 cgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  27688051 cgatacgtataagaagagtatccgaagattaaattttat 27688013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 635
Target Start/End: Original strand, 8028762 - 8028835
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    ||||||| | |||||||||| | ||||||||| || |||||||||||| |||| ||||||||||| || |||||    
T  8028762 gatacttcctgatacgtatcgggagagtatccaaatattaaattttatattttaaaaaaataattttccgatac 8028835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 642
Target Start/End: Original strand, 36660550 - 36660622
Alignment:
Q  569 tccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||||   ||||||| | || |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  36660550 tccgatacgtatccagagagtattcaaatattaaattttat-tttttaaaaaataattatccgatacgtcccga 36660622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 642 - 672
Target Start/End: Complemental strand, 15878392 - 15878362
Alignment:
Q  642 acgtatcaggagagtatccgatcattatcct 672  Q
    |||||||||||||||||||||||||||||||    
T  15878392 acgtatcaggagagtatccgatcattatcct 15878362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 670
Target Start/End: Complemental strand, 36758009 - 36757956
Alignment:
Q  619 aaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatc 670  Q
    |||||||||||  |||||||||||  ||||||||||||||||||||| ||||||    
T  36758009 aaataattatccaatacttcccgatacgtatcaggagagtatccgataattatc 36757956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 619 - 670
Target Start/End: Complemental strand, 36767533 - 36767480
Alignment:
Q  619 aaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatc 670  Q
    |||||||||||  |||||||||||  ||||||||||||||||||||| ||||||    
T  36767533 aaataattatccaatacttcccgatacgtatcaggagagtatccgataattatc 36767480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 595
Target Start/End: Complemental strand, 15878405 - 15878372
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||||||||||||||| |||||||||||    
T  15878405 gatactttccgatacgtatcaggagagtatccga 15878372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 595
Target Start/End: Complemental strand, 1400252 - 1400216
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||| |||||||||||||| |||||||||||    
T  1400252 tctgatacttcccgatacgtatcaggagagtatccga 1400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 570 - 626
Target Start/End: Complemental strand, 16564421 - 16564365
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| | ||||||||| || |||||||||||| |||| | |||||||||    
T  16564421 ccgatacgtatcgggagagtatccaaatattaaattttattttttaataaaataatt 16564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 543
Target Start/End: Complemental strand, 16564459 - 16564427
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatc 543  Q
    |||||||||||| ||||||||||||||||||||    
T  16564459 aaaatggatgacgtaccgtatcccctgcgtatc 16564427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 543
Target Start/End: Original strand, 16601203 - 16601235
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatc 543  Q
    |||||||||||| ||||||||||||||||||||    
T  16601203 aaaatggatgacgtaccgtatcccctgcgtatc 16601235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 570 - 626
Target Start/End: Original strand, 16601241 - 16601297
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| | ||||||||| || |||||||||||| |||| | |||||||||    
T  16601241 ccgatacgtatcgggagagtatccaaatattaaattttattttttaataaaataatt 16601297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 9781659 - 9781823
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||| |||| || ||||||||||||||||| ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||| |     
T  9781659 aaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaagattaatttttttt 9781758  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||  |||||||||||| |||||||||||  ||||||||||| |||||||||| |||||||||    
T  9781759 tttttttaaaataattatccgatacttcccgatacgtatcaggaaagtatccgataattatcctg 9781823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 511 - 672
Target Start/End: Complemental strand, 41676090 - 41675927
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||||||||| |||||||||| ||||| |||| ||||| ||||||| |  ||| ||||  |||||||||||||||||||||||||||     
T  41676090 aaaatggatgacgtaccgtatctcctgcgtatcatgcaccgatacctgtccgatacttcctaatatgtattggaagagtatccgaagattaaattttatt 41675991  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||||||||||||||||||  ||||||||||  || ||||||||||||||||||||||||||||    
T  41675990 tttttaaaaaataattatccaatacttcccgatacttatcaggagagtatccgatcattatcct 41675927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 501 - 673
Target Start/End: Original strand, 29167955 - 29168128
Alignment:
Q  501 ccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagatt 600  Q
    ||||||||||||| |||||||| || | ||||||||||||||| ||||| |||| |||  |||||||| ||| |||||||||| ||||||||||||||||    
T  29167955 ccatacttcaaaa-tggatgacgtatcatatcccctgcgtatcctgcaccgatacctgcatgatacttcccgttacgtatcaggagagtatccgaagatt 29168053  T
Q  601 aaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||| || |||||||||||||||||||||||||||||||  |||||| ||||||||| || || |||||||||    
T  29168054 aaatttaatttttttaaaaaataattatctgatacttcccgatacgtatgaggagagtacccaataattatcctg 29168128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 669
Target Start/End: Complemental strand, 32381160 - 32381010
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||||| |||||||||||||||| |||| |||||  |||| |||||||||||| || ||||||||||| |||||||||||||||||||||||||     
T  32381160 aaaatggatgatataccgtatcccctgcatatcatgcaccaatatttgtctgatacttcccaatacgtatcaggagagtatccgaagattaaattttatt 32381061  T
Q  611 tttttaaaaaataattatctgatacttcccgacgtatcaggagagtatccgatcattat 669  Q
    ||||||||||||||||||| |||        |||||||||||||||||||||| |||||    
T  32381060 tttttaaaaaataattatccgat--------acgtatcaggagagtatccgataattat 32381010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 502 - 642
Target Start/End: Original strand, 1036468 - 1036607
Alignment:
Q  502 catacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagatta 601  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||| || ||||    
T  1036468 catacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatccaaatatta 1036566  T
Q  602 aattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  1036567 aattttattttttaaaaaaataattatctgatactttccga 1036607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 6916987 - 6916844
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  6916987 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 6916889  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  6916888 attaaattttatttttttaaaaaataattatccgatactttccga 6916844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 20409667 - 20409524
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  20409667 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 20409569  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  20409568 attaaattttatttttttaaaaaataattatccgatacatcccga 20409524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 38330432 - 38330575
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  38330432 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 38330530  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  38330531 attaaattttatttttttaaaaaataattatccgatactttccga 38330575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 52895826 - 52895683
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  52895826 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 52895728  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  52895727 attaaattttatttttttaaaaaataattatccgatactttccga 52895683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 14167101 - 14167234
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || |||||| |||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||     
T  14167101 aaaatggatgacttatcgtatcacctgcgtatcctgcaccgatatctgtctgatacttcctgatacgtatcagaagagtatccgaagattaaattttatt 14167200  T
Q  611 t--ttttaaaaaataattatctgatacttcccga 642  Q
    |  ||||  |||||||||||  ||||||||||||    
T  14167201 ttattttttaaaataattattcgatacttcccga 14167234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 635
Target Start/End: Original strand, 2364694 - 2364818
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||| || |||| ||||||||||||||| ||||  |||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||     
T  2364694 aaaatggataacgtaccatatcccctgcgtatcctgcatcgatacctgcccaatactttccgatacgtatcagaagagtatccgaagattaaattttatt 2364793  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    ||||| ||||||||||||| |||||    
T  2364794 ttttttaaaaataattatccgatac 2364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 28949354 - 28949211
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| | |||||||||| | ||||||||| ||     
T  28949354 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaat 28949256  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  28949255 attaaattttatttttttaaaaaataattatccgatactttccga 28949211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 572 - 672
Target Start/End: Original strand, 38218461 - 38218563
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||  || ||| |||||||||||||||||||||    
T  38218461 gatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataattattcgatacttcccgatacatattaggagagtatccgatcattat 38218560  T
Q  670 cct 672  Q
    |||    
T  38218561 cct 38218563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 1043232 - 1043375
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  1043232 ccccgatacttcaaaa-tggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 1043330  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||    
T  1043331 attaaattttatttttaaaaaaaataattatctgatactttccga 1043375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 38948749 - 38948880
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||||||| |  ||||||  ||||||||||| ||||| ||||| || ||||||||||||     
T  38948749 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccaatacttctcgatacgtatccgaagaatatccaaatattaaattttatt 38948848  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||||||||||  ||||||| ||||    
T  38948849 tttttaaaaaataattatacgatactttccga 38948880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 629
Target Start/End: Complemental strand, 34432484 - 34432366
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||||||||||||||| ||||||| |||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||     
T  34432484 aaaatggatgacgtattgtatcccctgcgtatcatgcactggtatctgcctgatacttcctgatacgtatcaggagagtatccgaagattaaattttatt 34432385  T
Q  611 tttttaaaaaataattatc 629  Q
    |||  ||| ||||||||||    
T  34432384 tttaaaaataataattatc 34432366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 570 - 672
Target Start/End: Complemental strand, 24590166 - 24590062
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatt 667  Q
    |||||||||||||  |||||||  |||||||||||||||| |||||||||||||||||||||||||||||||  || ||||| |||||||||||||||||    
T  24590166 ccgatacgtatcaagagagtatttgaagattaaattttatttttttaaaaaataattatctgatacttcccgatacatatcaagagagtatccgatcatt 24590067  T
Q  668 atcct 672  Q
    |||||    
T  24590066 atcct 24590062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 511 - 635
Target Start/End: Original strand, 8132200 - 8132324
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||  |||  ||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  8132200 aaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggagagtatccaaatattaaattttatt 8132299  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    ||||||||||||||||||| |||||    
T  8132300 tttttaaaaaataattatccgatac 8132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 511 - 669
Target Start/End: Complemental strand, 9528940 - 9528784
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  ||||||| || ||||||||||| |||| |||| |||||||| |||||||||||| | | |||||| ||||||||| |||        
T  9528940 aaaatggatgacgtattgtatcccttgtgtatcttgcaccgatacctgtttgatacttcccgatacgtatcgggatagtatctgaagattaatttt---- 9528845  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    ||||| |||||||||||||||||||||||||  |||||| ||||||||||||||| |||||    
T  9528844 ttttttaaaaataattatctgatacttcccgatacgtattaggagagtatccgataattat 9528784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 13013105 - 13012962
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  13013105 ccccaatacttcaaaa-tggatgacatatcgtatcccctgtgtatcatgcactgatacctgcccgatacttcccgatacgtatcgggagagtatccaaat 13013007  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| | ||||||||| || ||||| ||||||    
T  13013006 attaaattttattttttaagaaaataattttccgatacgtcccga 13012962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 545 - 670
Target Start/End: Original strand, 24851525 - 24851652
Alignment:
Q  545 tgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--a 642  Q
    ||||| |||| ||||||||||||| |  |||| |||||  ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||  |    
T  24851525 tgcaccgatacctgtctgatacttcctaatacatatcaagagagtatccaaagattaaattttatttttttaaaaaataattatccgatacttcccgata 24851624  T
Q  643 cgtatcaggagagtatccgatcattatc 670  Q
    || |||||||||||||||||| ||||||    
T  24851625 cgcatcaggagagtatccgataattatc 24851652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 511 - 635
Target Start/End: Complemental strand, 28659401 - 28659277
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||| |||| ||||||||||| ||||| ||||  || | |||||||||||||||||||| | ||||||||| || ||||||||||||     
T  28659401 aaaatggatgacgtacggtattccctgcgtatcatgcaccgatacatgcccgatactttccgatacgtatccggagagtatccaaatattaaattttatt 28659302  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    ||||||||||||||||||| |||||    
T  28659301 tttttaaaaaataattatccgatac 28659277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 37104125 - 37104268
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| ||||| |||| ||| | ||||||| | |||||||||| | ||||||||| ||     
T  37104125 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaat 37104223  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||||||||| ||||||| ||||    
T  37104224 attaaattttattttttaaaaaaataattatccgatactttccga 37104268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 511 - 635
Target Start/End: Original strand, 10822419 - 10822545
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcact-gatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||||||||| || | ||| ||||||||||| |||||  |||||||||||||||||| ||||||| | |||| |||||||||||||||||||||||||    
T  10822419 aaaatggatgacgtatcatattccctgcgtatcctgcacccgatatctgtctgatacttcccgatacatctcaggagagtatccgaagattaaattttat 10822518  T
Q  610 gtttttaaaa-aataattatctgatac 635  Q
     ||||||||| |||||||||| |||||    
T  10822519 ttttttaaaataataattatccgatac 10822545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 40776012 - 40776138
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||| ||| ||  |||||||||||||||| |||||  |||||||  ||||||||  |||||||||||||  ||||||||||||||||||||||||     
T  40776012 aaaatggaagacgtaatgtatcccctgcgtatcctgcaccaatatctgcatgatacttctcgatacgtatcaggcgagtatccgaagattaaattttatt 40776111  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    ||||||||||| ||||||| |||||||    
T  40776112 tttttaaaaaacaattatccgatactt 40776138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 527 - 670
Target Start/End: Complemental strand, 48715310 - 48715165
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||| |||||||||| | ||| |||| | | | ||||||| |||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||    
T  48715310 cgtatctcctgcgtatcctacaccgataccggcccgatacttcccgatacgtatcaggagagtgtccgaagattaaattttattgttttaaaaaataatt 48715211  T
Q  627 atctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    ||| |||||||||||  || ||||| ||||||||| ||| ||||||    
T  48715210 atcagatacttcccgatacatatcaagagagtatctgataattatc 48715165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 3426865 - 3426991
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||||||||||||||| ||||| ||||  |||| ||||||| | |||||||||| | ||||||||| || ||||||||||||     
T  3426865 aaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatccaaatattaaattttatt 3426964  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||| |||||||||||||| |||||||    
T  3426965 ttttaaaaaaataattatccgatactt 3426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 527 - 673
Target Start/End: Complemental strand, 34096637 - 34096490
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    ||||||||||||||||| ||||| ||||||||   |||||||||  ||||| |||||||||||||| |||||||||| ||| | |||||   ||||||||    
T  34096637 cgtatcccctgcgtatcctgcaccgatatctgcgcgatactttctaatacgcatcagaagagtatctgaagattaaacttt-ttttttttttaaataatt 34096539  T
Q  627 atctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||| |||||||||||  ||||||||||| ||||||| || |||||||||    
T  34096538 atccgatacttcccgatacgtatcaggaaagtatccaataattatcctg 34096490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 498 - 635
Target Start/End: Complemental strand, 37346961 - 37346825
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| |  |||||||| ||     
T  37346961 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggggagtatccaaat 37346863  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| |||| | ||||||||| || |||||    
T  37346862 attaaattttattttttaagaaaataattttccgatac 37346825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 485 - 634
Target Start/End: Original strand, 30323708 - 30323856
Alignment:
Q  485 ttccctataaagccccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcaga 584  Q
    |||||| |||||||||  ||||||||||| ||||||||  | ||||| | ||| ||||| |||||||||||||| | ||||||| |||||||||||| |     
T  30323708 ttccctgtaaagccccg-atacttcaaaa-tggatgacgcaacgtattctctgtgtatcctgcactgatatctgcccgatacttcccgatacgtatctgg 30323805  T
Q  585 agagtatccgaagattaaattttatgttttt-aaaaaataattatctgata 634  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||| ||||    
T  30323806 agagtatccaaatattaaattttatttttttaaaaaaataattatccgata 30323856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 562 - 673
Target Start/End: Original strand, 29861869 - 29861978
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatc 659  Q
    ||||||||||||||||||||||||||||||||||||||    |||||| |||||   ||||||||||| |||||||| ||  ||||||||||| ||||||    
T  29861869 gatactttccgatacgtatcagaagagtatccgaagat----ttttattttttttttaaataattatccgatacttctcgatacgtatcaggaaagtatc 29861964  T
Q  660 cgatcattatcctg 673  Q
    |||| |||||||||    
T  29861965 cgataattatcctg 29861978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 635
Target Start/End: Original strand, 43189672 - 43189796
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||  |||||||||||||||||||| ||||| |||| ||| | |||||||  ||||||||||||| ||||||||| || |||||||||| |     
T  43189672 aaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcaggagagtatccaaatattaaattttttt 43189771  T
Q  611 tttttaaaaaataattatctgatac 635  Q
    |||| | ||||||||| || |||||    
T  43189772 ttttaagaaaataattttccgatac 43189796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 670
Target Start/End: Complemental strand, 3708392 - 3708219
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||| |||| |||| | |||  |||  || | |||||||| ||||||||||||| ||||||| ||||     
T  3708392 ccccgatacttcaaaa-tggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatacttttcgatacgtatcaggagagtattcgaat 3708294  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    ||||||||||   ||||||||| ||||||||  |||||||| ||  ||||||||||||||||||| || ||||||    
T  3708293 attaaatttttattttttaaaatataattattcgatacttctcgatacgtatcaggagagtatccaataattatc 3708219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 498 - 628
Target Start/End: Original strand, 5984232 - 5984361
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||  ||||| ||||  ||  |||||||| || ||||||||| | ||||||||| ||     
T  5984232 ccccgatacttcaaaa-tggatgacgtactgtatcccctgcgtattctgcaccgatacatgcttgatacttcccaatacgtatctggagagtatccaaat 5984330  T
Q  598 attaaattttatgtttttaaaaaataattat 628  Q
    |||||||||||| |||| |||||||||||||    
T  5984331 attaaattttattttttaaaaaaataattat 5984361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 670
Target Start/End: Original strand, 33039630 - 33039790
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||| |||||  ||||||| |||||||| ||||| |||| ||||   |||||  ||||||  |||||  |||||||||||| |||||||| |||     
T  33039630 aaaatggataacatattgtatcccttgcgtatcctgcaccgatacctgttcaatactccccgatatatatcaagagagtatccgaaaattaaattatat- 33039728  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    ||   |||||||||||||| |||||||||||  |||||| ||||||||||||||| ||||||    
T  33039729 ttaaaaaaaaataattatccgatacttcccgatacgtatgaggagagtatccgataattatc 33039790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 637
Target Start/End: Original strand, 12158778 - 12158853
Alignment:
Q  560 ctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  12158778 ctgatactttcc-atacatatcagaagattatccgaagattaaattttat-tttttaaaaaacaattatccgatactt 12158853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 620
Target Start/End: Original strand, 25256633 - 25256742
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||| |||||| ||||||||  ||||| |||| ||||| ||||||| |||||||||||| | ||||||| | || ||||||||||||     
T  25256633 aaaatggatgacgtactgtatcctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtattcaaatattaaattttatt 25256732  T
Q  611 tttttaaaaa 620  Q
    ||||| ||||    
T  25256733 ttttttaaaa 25256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 2472955 - 2472871
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccga 595  Q
    ||||| |||||| || |||||||||||| |||| ||||| | || ||| |||||||||||||||||||||||| |||||||||||    
T  2472955 aaaatagatgacgtatcgtatcccctgcatatcctgcaccggtacctgcctgatactttccgatacgtatcaggagagtatccga 2472871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 10763678 - 10763834
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||| |||| || ||||||||||||  ||| |||||  ||||||| | |||| |||  ||||||||||||||||||||||||||||||| |||| |     
T  10763678 aaaatggttgacgtatcgtatcccctgc--atcctgcaccaatatctgcccgatattttttgatacgtatcagaagagtatccgaagattaatttttttt 10763775  T
Q  611 tttttaaaaaataattatctgatacttcccg-acgtatcaggagagtatccgatcattatcctg 673  Q
    |||     ||||||||||| ||||||||| | ||||||||| | |||||| ||| |||||||||    
T  10763776 ttt-----aaataattatccgatacttccggtacgtatcagaaaagtatctgataattatcctg 10763834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 527 - 635
Target Start/End: Complemental strand, 31653487 - 31653379
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||||| || ||||| ||||| |||||||| | ||||||| |||||||||||| | ||||||||| || |||||||||||| |||| | |||||||||    
T  31653487 cgtatcccttgtgtatcatgcaccgatatctgcccgatacttcccgatacgtatcgggagagtatccaaatattaaattttattttttaagaaaataatt 31653388  T
Q  627 atctgatac 635  Q
     || |||||    
T  31653387 ttccgatac 31653379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 570 - 642
Target Start/End: Complemental strand, 36367744 - 36367672
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| | ||||||||| || |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  36367744 ccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatactttccga 36367672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 551 - 609
Target Start/End: Complemental strand, 2223040 - 2222982
Alignment:
Q  551 gatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  2223040 gatacctgtctgatattttccgatacgtatcaggagagtatctgaagattaaattttat 2222982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 572 - 637
Target Start/End: Complemental strand, 9092533 - 9092467
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttatgt-ttttaaaaaataattatctgatactt 637  Q
    |||||||||||| ||||||||||||||||||||||||| | ||| |||||| |||||||||||||||    
T  9092533 gatacgtatcaggagagtatccgaagattaaattttatttatttaaaaaaacaattatctgatactt 9092467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 626
Target Start/End: Original strand, 14334204 - 14334292
Alignment:
Q  538 cgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| |||| ||||| ||||||  |||||||||||  | ||||||||| || |||||||||||| |||| | |||||||||    
T  14334204 cgtatcttgcaccgatacctgtccgatactccccgatacgtattgggagagtatccaaatattaaattttattttttaagaaaataatt 14334292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 2364811 - 2364849
Alignment:
Q  569 tccgatacgtatcagaagagtatccgaagattaaatttt 607  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  2364811 tccgatacgtatcagaagagtattcgaagattaattttt 2364849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 609
Target Start/End: Original strand, 4812033 - 4812079
Alignment:
Q  563 atactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||| || ||||||| ||||||||||||| ||||||||||||    
T  4812033 atactttccaattcgtatcaaaagagtatccgaaaattaaattttat 4812079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 643 - 672
Target Start/End: Original strand, 36551535 - 36551564
Alignment:
Q  643 cgtatcaggagagtatccgatcattatcct 672  Q
    ||||||||||||||||||||||||||||||    
T  36551535 cgtatcaggagagtatccgatcattatcct 36551564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 569 - 637
Target Start/End: Complemental strand, 41027989 - 41027921
Alignment:
Q  569 tccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    ||||||||||||  | |||||||||||  |||||||||||| |||| |||||| |||| || |||||||    
T  41027989 tccgatacgtattgggagagtatccgacaattaaattttattttttaaaaaaacaattgtccgatactt 41027921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 19128170 - 19128333
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||| |||| || ||||||||||| ||||| |||||  ||| | | | ||||||||||||||||||||||||||||||||||||||||||||||||     
T  19128170 aaaatggttgacgtatcgtatcccctgtgtatcctgcaccaatacccgcccgatactttccgatacgtatcagaagagtatccgaagattaaattttatt 19128269  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    ||||| ||||||||||||| |||||||||||  ||||||||||| |||||||||| ||||||||    
T  19128270 ttttttaaaaataattatccgatacttcccgatacgtatcaggaaagtatccgataattatcct 19128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 8356975 - 8357106
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||||| ||||||| |||||||||||| ||||||||||| || ||||||||||||     
T  8356975 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatccaaatattaaattttatt 8357074  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| |||||||||||||| ||||||| ||||    
T  8357075 ttttaaaaaaataattatccgatactttccga 8357106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 1036939 - 1036796
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  1036939 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 1036841  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  1036840 attaaattttatttttttaaaaaataattatccgatactttccga 1036796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 501 - 642
Target Start/End: Complemental strand, 31195979 - 31195839
Alignment:
Q  501 ccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagatt 600  Q
    ||||||||||||| |||||||| || ||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| || |||    
T  31195979 ccatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatatt 31195881  T
Q  601 aaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||| |||| |||||||||||||| ||||||| ||||    
T  31195880 aaattttattttttaaaaaaataattatccgatactttccga 31195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 26327160 - 26327335
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||| |||| ||||| ||||| |||| ||| | ||||||| ||||||||||| ||| ||||||||||||    
T  26327160 ccccgatacttcaaaa-tggatgacgtatcgtatctcctgtgtatcctgcaccgatacctgcccgatacttcccgatacgtataaga-gagtatccgaag 26327257  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| |||  |||||||||||||| |||||||||||  || |||| | ||||||| |||| |||||||||    
T  26327258 attaaattttatttttaaaaaaaataattatccgatacttcccgatacttatctgaagagtattcgatgattatcctg 26327335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 670
Target Start/End: Original strand, 234311 - 234487
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| || |||||| |||||||||| ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||    
T  234311 ccccgatacttcaaaa-tggttgacgtatcgtatctcctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaag 234409  T
Q  598 attaa---attttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    |||||    |||| | |||||  |||||||||||| |||||||||||  | || |||||| |||||||||| ||||||    
T  234410 attaactttttttttttttttttaaaataattatccgatacttcccgatatgtttcaggaaagtatccgataattatc 234487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 511 - 668
Target Start/End: Complemental strand, 6708142 - 6707983
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||||||  |||||||||| ||||| ||||| |||| ||  |||||||||||| ||| ||||||| |||||||||||||||||||| ||||     
T  6708142 aaaatggatgacatattgtatcccctgtgtatcatgcaccgataccttcctgatactttccaatatgtatcaggagagtatccgaagattaaatattatt 6708043  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatta 668  Q
    ||   |||||||||||||| |||||||||||  || |||||| ||||||| |||| ||||    
T  6708042 ttaaaaaaaaataattatccgatacttcccgatacttatcagaagagtattcgataatta 6707983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 11105303 - 11105466
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||| |  |||||||| ||||  ||||  |||  ||||||||| |||||||||||||||| ||| |||||||||||||||||     
T  11105303 aaaatggatgacgtaccgtattctttgcgtatcctgcatcgatacatgttcgatactttctgatacgtatcagaagaatattcgaagattaaattttatt 11105402  T
Q  611 tttttaaaaaataattatctgatacttcc--cgacgtatcaggagagtatccgatcattatcct 672  Q
    ||||||||||||||||||  |||||||||    || |||||  |||||||||||||||||||||    
T  11105403 tttttaaaaaataattattcgatacttccgtatacatatcaaaagagtatccgatcattatcct 11105466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 32130760 - 32130629
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||| ||||| |||||||||||||||||||| |||||||||| ||||  |||| || |||||||||||||| ||||||||| || ||||||||||||     
T  32130760 aaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagtatccaaatattaaattttatt 32130661  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| | ||||||||| || ||||| ||||||    
T  32130660 ttttaagaaaataattttccgatacgtcccga 32130629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 3212482 - 3212625
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||| || || ||||| ||||| |||||||| | ||||||| |||||||||||| | ||||||||| ||     
T  3212482 ccccgatacttcaaaa-tggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagagtatccaaat 3212580  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||||| |||||||||||| ||||| ||||||    
T  3212581 attaaattttatttttttataaaataattatccgatacgtcccga 3212625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 511 - 672
Target Start/End: Complemental strand, 13607886 - 13607723
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||| |||| |||| |||||||||| ||| || ||| |||| |||||||||||| |||||||||||||||||| |||  |     
T  13607886 aaaatggatgacgtatcgtatcctctgcatatcctgcactgatacctgcctaataatttctgatacgtatcaggagagtatccgaagattaactttattt 13607787  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    | ||| | |||||||||| ||||||||||||  ||||||||||| |||||  ||| ||||||||    
T  13607786 tattttataaataattatatgatacttcccgatacgtatcaggatagtatatgataattatcct 13607723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 524 - 642
Target Start/End: Complemental strand, 7188867 - 7188749
Alignment:
Q  524 taccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaata 623  Q
    |||||||||||||||||||| ||||| |||| ||| ||||||||| | |||||||||| | ||||||||| || |||||||||||| |||  ||||||||    
T  7188867 taccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcctgatacgtatccggagagtatccaaatattaaattttatttttaaaaaaaata 7188768  T
Q  624 attatctgatacttcccga 642  Q
    |||||| ||||| ||||||    
T  7188767 attatccgatacatcccga 7188749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 620
Target Start/End: Original strand, 32017994 - 32018103
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||| |||||||| | |||||||||| ||||||||| | |||||||  ||| ||||||||||||     
T  32017994 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcccgatactttcctatacgtatccgtagagtatatgaatattaaattttatt 32018093  T
Q  611 tttttaaaaa 620  Q
    ||||||||||    
T  32018094 tttttaaaaa 32018103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 570 - 663
Target Start/End: Original strand, 7254996 - 7255092
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgttttta-aaaaataattatctgatacttcccg--acgtatcaggagagtatccgat 663  Q
    |||||||||||||||||||||||||||||||||||||||| |    | || ||||||||||||||||||||||  ||||||||||||||||||||||    
T  7254996 ccgatacgtatcagaagagtatccgaagattaaattttatttaaaaataataataattatctgatacttcccgatacgtatcaggagagtatccgat 7255092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 31079669 - 31079780
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtt-tttaaaaaataattatctgatacttcccg--acgtatcaggagagtat 658  Q
    |||||||  ||||| ||||||| | ||||||  ||||||||||||||| || ||| |||||||||||||||||||||||||  |||||||||||||||||    
T  31079669 gatacttctcgataagtatcaggatagtatcttaagattaaattttattttattttaaaaataattatctgatacttcccgatacgtatcaggagagtat 31079768  T
Q  659 ccgatcattatc 670  Q
    ||||| ||||||    
T  31079769 ccgatgattatc 31079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 498 - 626
Target Start/End: Complemental strand, 25834609 - 25834482
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||  |||||||| || |||||||| |||||||| ||||||||||  || |||||| ||  ||||||||||||| | ||||||| ||     
T  25834609 ccccgatacttcaaat-tggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtatccaaat 25834511  T
Q  598 attaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| |||| | |||||||||    
T  25834510 attaaattttattttttaataaaataatt 25834482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 27083990 - 27084100
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| ||||| |||| |||    |||||| || |||||||| || ||||||||| |||    
T  27083990 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgctcaatacttcccaatacgtataaggagagtatccaaag 27084088  T
Q  598 attaaattttat 609  Q
    ||||||||||||    
T  27084089 attaaattttat 27084100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 569 - 673
Target Start/End: Complemental strand, 10894564 - 10894456
Alignment:
Q  569 tccgatacgtatcagaagagtatccgaagattaaattt--tatgtttttaaaaaataattatctgatacttcc--cgacgtatcaggagagtatccgatc 664  Q
    ||||||||||||||| ||||||||||||||||||||||  | | |||||  ||| |||||||  |||||||||    ||||||||||||||||||||||     
T  10894564 tccgatacgtatcaggagagtatccgaagattaaattttgtttttttttttaaattaattattcgatacttcctaatacgtatcaggagagtatccgata 10894465  T
Q  665 attatcctg 673  Q
    |||||||||    
T  10894464 attatcctg 10894456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 629
Target Start/End: Original strand, 3299158 - 3299276
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||  |||||||||| |||| |||| ||||| |||| |||  ||||| ||||||||||||||| | |||||||   |||||||||||||||     
T  3299158 aaaatagatgatgtaccgtatcctctgcatatcctgcaccgatacctgcatgatattttccgatacgtatctggagagtatttaaagattaaattttatt 3299257  T
Q  611 tttttaaaaaataattatc 629  Q
    || ||| ||| ||||||||    
T  3299258 ttattataaagtaattatc 3299276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 620
Target Start/End: Complemental strand, 22989435 - 22989326
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||||||  | ||| | |||||||  ||||| |||||||  |||||||||||| ||||||||| | | |||||| || |||||||||||||     
T  22989435 aaaatggatgacatattgcatctcttgcgtattctgcacagatatctacctgatactttcctatacgtatcgggatagtatcagatgattaaattttatt 22989336  T
Q  611 tttttaaaaa 620  Q
    ||||| ||||    
T  22989335 tttttcaaaa 22989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 620
Target Start/End: Original strand, 23798962 - 23799071
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||||||  | ||| | |||||||  ||||| |||||||  |||||||||||| ||||||||| | | |||||| || |||||||||||||     
T  23798962 aaaatggatgacatattgcatctcttgcgtattctgcacagatatctacctgatactttcctatacgtatcgggatagtatcagatgattaaattttatt 23799061  T
Q  611 tttttaaaaa 620  Q
    ||||| ||||    
T  23799062 tttttcaaaa 23799071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 592
Target Start/End: Complemental strand, 13061406 - 13061325
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatc 592  Q
    |||||| ||||| |||| ||| | ||||||||| ||||  |||||||| ||||||||||| ||||||||| || ||||||||    
T  13061406 aaaatgaatgacgtaccatattctctgcgtatcctgcatcgatatctgcctgatactttctgatacgtattaggagagtatc 13061325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 625
Target Start/End: Original strand, 26560827 - 26560928
Alignment:
Q  514 atggatgacataccgtatcccctgcgtatcttgcactgatatctgtc-tgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtt 612  Q
    ||||||||| |||  ||| | ||||||||||||||| |||||||||| ||||||||||||||         |||||||||||||||||||||||||  ||    
T  26560827 atggatgacgtactatattctctgcgtatcttgcaccgatatctgtcttgatactttccgat---------aagagtatccgaagattaaatttta--tt 26560915  T
Q  613 tttaaaaaataat 625  Q
    || ||||||||||    
T  26560916 ttaaaaaaataat 26560928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 635
Target Start/End: Complemental strand, 21113623 - 21113557
Alignment:
Q  569 tccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||| ||||||| |||||||||||| ||||||||||||| |||  ||| ||||||| | ||||||    
T  21113623 tccgatgcgtatcaaaagagtatccgatgattaaattttatttttaaaaataataattgtttgatac 21113557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 601
Target Start/End: Original strand, 31079736 - 31079778
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccgaagatta 601  Q
    |||||||||| |||||||||||||| ||||||||||| |||||    
T  31079736 tctgatacttcccgatacgtatcaggagagtatccgatgatta 31079778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 609
Target Start/End: Complemental strand, 10894623 - 10894586
Alignment:
Q  572 gatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  10894623 gatacgtatcaggagagtatccaaagattaaattttat 10894586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 595
Target Start/End: Original strand, 7255055 - 7255091
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||| |||||||||||||| |||||||||||    
T  7255055 tctgatacttcccgatacgtatcaggagagtatccga 7255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 29892983 - 29893047
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgata 575  Q
    |||||||||||  ||| |||||||||||||||| ||||  |||||||||| |||| || ||||||    
T  29892983 aaaatggatgatgtactgtatcccctgcgtatcctgcatcgatatctgtccgatatttcccgata 29893047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 2e-42; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 551 - 672
Target Start/End: Complemental strand, 24793792 - 24793669
Alignment:
Q  551 gatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttccc--gacgtatc 648  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||   |||||||    
T  24793792 gatacctgtctaatacttttcgatacgtatcagaagagtatccgaagattaaattttattttttaaaaaaataattatctgatacttcccaatacgtatc 24793693  T
Q  649 aggagagtatccgatcattatcct 672  Q
    ||||||||||||||||||||||||    
T  24793692 aggagagtatccgatcattatcct 24793669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 40694075 - 40694251
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||  || |||||||| |||||||  ||||| |||| |||  |||||||| |||||||||||||| |||||||| ||||    
T  40694075 ccccgatacttcaaaa-tggatgatgtatcgtatcccatgcgtattctgcaccgatacctgattgatacttcccgatacgtatcaggagagtatctgaag 40694173  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| |||||| ||||||||||||||||||||||||  |||||| |||||||||||| || |||||||||    
T  40694174 attaaattttatttttttataaaataattatctgatacttcccgatacgtatgaggagagtatccaataattatcctg 40694251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 2586353 - 2586516
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||| ||||| | ||| || | ||| | |||||||||| ||||||||||||||||||||||||||||||| ||| |     
T  2586353 aaaatggatgacgtaccgtatcccctgagtatccttcaccgacacctgcccgatactttccaatacgtatcagaagagtatccgaagattaaaatttgtt 2586452  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||||||||||||||||||  ||||||||||  || || |||||||||||| ||||||||||||    
T  2586453 tttttaaaaaataattatcctatacttcccgatacataccaggagagtatctgatcattatcct 2586516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 498 - 674
Target Start/End: Complemental strand, 36512047 - 36511869
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| ||  ||||||| |||||||| ||| | ||||  || | ||||||||||||||||||||||||||||||||||||    
T  36512047 ccccgatacttcaaaa-tggttgacgtattgtatcccgtgcgtatcctgcgccgatacttgcccgatactttccgatacgtatcagaagagtatccgaag 36511949  T
Q  598 attaaattttatgtttttaa-aaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctga 674  Q
    |||||||||||| ||||||| |||||||||||| ||||||||| |  ||||||||||| |||||||||| ||||||||||    
T  36511948 attaaattttatttttttaaaaaaataattatccgatacttcctgatacgtatcaggaaagtatccgataattatcctga 36511869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 511 - 669
Target Start/End: Complemental strand, 37992634 - 37992473
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||| ||| ||  ||||||| |||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  37992634 aaaatggaagacgtattgtatcccttgcggatcttgcaccgatacatgtctgatactttccgatacgtatcagaagagtatccaaagattaaattttatt 37992535  T
Q  611 tttttaa-aaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    ||||||| |||||||||||| |||| ||||||  || ||||||||||||||| ||| |||||    
T  37992534 tttttaaaaaaataattatccgataattcccgatacatatcaggagagtatctgatgattat 37992473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 8064222 - 8064079
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | |||||||||||||||||||| | ||||||||  ||     
T  8064222 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaat 8064124  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  8064123 attaaattttatttttttaaaaaataattatccgatactttccga 8064079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 17892265 - 17892428
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||| ||| ||||||||| | |||||||| | ||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||||||||||     
T  17892265 aaaatggacgacgtaccgtatctcatgcgtatcatacaccgatacctgcccgatacttcccgatatgtatcagaagagtatccgaagattaaattttatt 17892364  T
Q  611 tttttaaaaaataattatctgatacttccc--gacgtatcaggagagtatccgatcattatcct 672  Q
    ||   ||||||||||||| |||||||||||   ||||||||||||||||||| |||||||||||    
T  17892365 ttaaaaaaaaataattatatgatacttcccaatacgtatcaggagagtatccaatcattatcct 17892428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 19738702 - 19738845
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  19738702 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 19738800  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  19738801 attaaattttatttttttaaaaaataattatccgatactttccga 19738845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 52122982 - 52122839
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  52122982 ccccgatacttcaaaa-tggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 52122884  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  52122883 attaaattttatttttttaaaaaataattatctgatactttccga 52122839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 570 - 673
Target Start/End: Complemental strand, 31946268 - 31946163
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatt 667  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||  |||||||||||||||||||||| |||    
T  31946268 ccgatacgtatcagaagagtatccgaagattaaattttatttttaaaaaaaataattatccgatacttcccgatacgtatcaggagagtatccgataatt 31946169  T
Q  668 atcctg 673  Q
    ||||||    
T  31946168 atcctg 31946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 570 - 672
Target Start/End: Original strand, 36943745 - 36943849
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatt 667  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |  |||||||||||||||||| |||||||    
T  36943745 ccgatacgtatcagaagagtatccgaagattaaaatttattttttttaaaaataattatctgatacttcctgatacgtatcaggagagtatctgatcatt 36943844  T
Q  668 atcct 672  Q
    |||||    
T  36943845 atcct 36943849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 538 - 672
Target Start/End: Original strand, 754215 - 754350
Alignment:
Q  538 cgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||||| || ||| | |||| |||| |||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||  ||||||    
T  754215 cgtatcttgcactgttacctgcccgataatttctgatacgtatcagaacagtatccgaagatt-aattttatcattttaaaaaataattatcatatactt 754313  T
Q  638 cccg--acgtatcaggagagtatccgatcattatcct 672  Q
    || |  |||||||||||||||||||||||||||||||    
T  754314 cctgatacgtatcaggagagtatccgatcattatcct 754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 52721281 - 52721412
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| || ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||  | ||||||||| || ||||||||||||     
T  52721281 aaaatagatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccgatacgtattcggagagtatccaaatattaaattttatt 52721380  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||||| |||||||||||| ||||||| ||||    
T  52721381 tttttataaaataattatccgatactttccga 52721412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 21637682 - 21637808
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| | || || |||||  ||||  |||| ||||| || ||| |||||| |||||||||||||| |||||||||||||||||||||||||     
T  21637682 aaaatggatgacgtcccataccccctatgtattctgcattgatacctctcttatacttcccgatacgtatcaggagagtatccgaagattaaattttatt 21637781  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    ||||||||||| |||||||||||||||    
T  21637782 tttttaaaaaacaattatctgatactt 21637808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 511 - 672
Target Start/End: Complemental strand, 3109406 - 3109243
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||| ||||||||||| |  |||||||  || || |||| ||||  |||| ||| ||||||||||||||||| ||  |||||||||||||||||     
T  3109406 aaaatggatcacataccgtattctttgcgtattctgtaccgatacctgttcgatatttttcgatacgtatcagaagattaatcgaagattaaattttatt 3109307  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||| || ||||||||||| |||||||| ||  ||||||| ||||||||||| |||||||||||    
T  3109306 ttttaaacaaataattatccgatacttctcgatacgtatccggagagtatccaatcattatcct 3109243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 53322342 - 53322485
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||||  |||||||| |||||||||| | |   ||||||| |||||||||||| | ||||||||| ||     
T  53322342 ccccgatacttcaaaa-tggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagtatccaaat 53322440  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  53322441 attaaattttatttttttaaaaaataattatccgatactttccga 53322485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 642
Target Start/End: Original strand, 5834847 - 5834978
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| | ||| ||| |||||||||||| | ||||||||| || ||||||||||||     
T  5834847 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagtatccaaatattaaattttatt 5834946  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| | ||||||||| || ||||| ||||||    
T  5834947 ttttaagaaaataattttccgatacgtcccga 5834978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 670
Target Start/End: Complemental strand, 46432034 - 46431873
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||| ||||||| || ||||||| |||| |||| ||||  |||| ||| ||||||||| |||||||||||||  ||||||||| |||||||||||||||     
T  46432034 aaaacggatgacgtatcgtatcctctgcatatcctgcaacgatacctgactgatacttcccgatacgtatcaagagagtatccaaagattaaattttatt 46431935  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    ||   |||||||||||||| |||||||  ||  | |||||||||||||||||||| ||||||    
T  46431934 ttaaaaaaaaataattatccgatacttttcgatatgtatcaggagagtatccgataattatc 46431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 498 - 669
Target Start/End: Original strand, 47607115 - 47607290
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||||||||||| |||||| |||||||||| ||||| |||||||| |||||| || | |||||||||||| |||| ||| ||||    
T  47607115 ccccgatacttcaaaa-tggatgacatatcgtatctcctgcgtatcctgcac-gatatctgcctgatatttcctgatacgtatcaggagagcatctgaag 47607212  T
Q  598 attaaattttatgt----ttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattat 669  Q
    |||||||||||| |      | || ||| |||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  47607213 attaaattttatttaaaaaataaataaaaaattatctgatacttcccgatacgtatcaggatagtatccgataattat 47607290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 538 - 670
Target Start/End: Complemental strand, 726629 - 726496
Alignment:
Q  538 cgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||| | || ||| | |||| |||| |||||||||||||| ||||||| |||||||| ||||||  ||||||||| ||||||||  ||||||    
T  726629 cgtatcttgcaccgttacctgcccgataatttctgatacgtatcagaacagtatccaaagattaa-ttttattattttaaaaagtaattatcatatactt 726531  T
Q  638 cccga--cgtatcaggagagtatccgatcattatc 670  Q
    || ||  ||||||||||||||||||||||||||||    
T  726530 cctgatacgtatcaggagagtatccgatcattatc 726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 511 - 634
Target Start/End: Complemental strand, 5325822 - 5325699
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| || ||||||||||||     
T  5325822 aaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaattttatt 5325723  T
Q  611 tttttaaaaaataattatctgata 634  Q
    |||  |||||||||||||| ||||    
T  5325722 tttaaaaaaaataattatccgata 5325699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 498 - 628
Target Start/End: Original strand, 41145617 - 41145744
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||| ||||  |||| ||||| |||||||||||||||||||  | ||||||||| ||     
T  41145617 ccccgatacttcaaaa-tggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagtatccaaat 41145715  T
Q  598 attaaattttatgtttttaaaaaataattat 628  Q
    |||||||||||  ||||||||||| ||||||    
T  41145716 attaaatttta--tttttaaaaaaaaattat 41145744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 1176986 - 1177158
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| | | |||| || |||||||||| |||||| |||||  ||| ||| | |||||||||||||| ||||||||||||||||||||     
T  1176986 ccccgatacttcaaaa-tagttgacgtatcgtatcccctacgtatcctgcacccatacctgcccgatactttccgatatgtatcagaagagtatccgaaa 1177084  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
     ||   |||||| |||||   ||||||||||| |||||||||||  ||||||||||| |||||||||| |||||||||    
T  1177085 ttt---ttttat-ttttttttaaataattatccgatacttcccgatacgtatcaggaaagtatccgataattatcctg 1177158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 42472670 - 42472539
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||| |||| ||||||||||| ||||| ||||  || | ||||||| || ||||||||| | ||||||||| || ||||||||||||     
T  42472670 aaaatggatgacgtactgtattccctgcgtatcctgcaccgatacttgcccgatacttcccaatacgtatccggagagtatccaaatattaaattttatt 42472571  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||  |||||||||||||| ||||| ||||||    
T  42472570 tttaaaaaaaataattatccgatacatcccga 42472539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 670
Target Start/End: Complemental strand, 42630541 - 42630424
Alignment:
Q  556 ctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaa-aataattatctgatacttcccg--acgtatcagga 652  Q
    ||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||| ||   |||| |||||||||| ||||||||| |  ||||||||||     
T  42630541 ctgtccgatattttccgatacgtatcaggagaatatccgaagattaaattttattttaaaaaaataataattatccgatacttcctgatacgtatcaggt 42630442  T
Q  653 gagtatccgatcattatc 670  Q
    ||||||||||| ||||||    
T  42630441 gagtatccgataattatc 42630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 637
Target Start/End: Complemental strand, 55901240 - 55901114
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| || ||||||||||| ||||| ||||| ||||  |  | |||||||  ||||||||||||| | | |||||||||||||||||||||     
T  55901240 aaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacatacccgatacttctcgatacgtatcaggaaaatatccgaagattaaattttatt 55901141  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||  ||||||||||||||||||||||    
T  55901140 tttaaaaaaaataattatctgatactt 55901114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 620
Target Start/End: Original strand, 27981913 - 27982022
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || |||||| |||||| ||| | ||| ||||||||||||||||||| ||||||||||||  |||||||  ||||||| || |||||     
T  27981913 aaaatggatgacgtatcgtatctcctgcgcatcctccaccgatatctgtctgatacttttcgatacgtatcaagagagtatttgaagattgaaatttatt 27982012  T
Q  611 tttttaaaaa 620  Q
    ||||||||||    
T  27982013 tttttaaaaa 27982022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 562 - 642
Target Start/End: Original strand, 39957632 - 39957712
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||  ||||||||||| | |||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  39957632 gatacttctcgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatactttccga 39957712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 634
Target Start/End: Original strand, 4400501 - 4400608
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||| |||| ||||| || || ||||  |||||||||||| |||||||||||||| |||||||| ||| |||||||||||| |||  |||||||||||    
T  4400501 cgtatctcctgtgtatcatgaaccgatacttgtctgatacttcccgatacgtatcaggagagtatcagaatattaaattttatttttaaaaaaaataatt 4400600  T
Q  627 atctgata 634  Q
    ||| ||||    
T  4400601 atccgata 4400608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 21058850 - 21058978
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaat--ttta 608  Q
    |||||| ||||| || ||||||| ||| ||||| ||||| ||||  ||||||||| || |||||||||||| | ||||||||| ||||||||||  ||||    
T  21058850 aaaatgaatgacgtagcgtatccactgtgtatcctgcaccgatacatgtctgatatttcccgatacgtatctggagagtatccaaagattaaattattta 21058949  T
Q  609 tgtttttaaaaaataattatctgatactt 637  Q
    | ||||| ||||| ||||||| |||||||    
T  21058950 ttttttttaaaaacaattatccgatactt 21058978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 38492372 - 38492239
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||| ||||| |||| ||| |          ||||||||||| | ||||||||| ||     
T  38492372 ccccgatacttcaaaa-tggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcc----------cgatacgtatccggagagtatccaaat 38492284  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  38492283 attaaattttatttttttaaaaaataattatccgatacatcccga 38492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 595
Target Start/End: Original strand, 51858849 - 51858933
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatc-ttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||||| || |||||| |||||||||| |||||| |||| ||||||||||||| |||||||||||||| |||||||||||    
T  51858849 aaaatggatgacgtatcgtatctcctgcgtatccttgcac-gatacctgtctgatacttcccgatacgtatcaggagagtatccga 51858933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 49069243 - 49069323
Alignment:
Q  557 tgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    ||||| |||||||| |||| |||| || ||||||| ||||||||||||||||| ||||||||||| ||||||| |||||||    
T  49069243 tgtctaatactttctgatatgtattaggagagtattcgaagattaaattttatttttttaaaaaacaattatccgatactt 49069323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 3403688 - 3403555
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||| ||||| |||||||||||          ||| |||||||||||| | ||||||||| ||     
T  3403688 ccccaatacttcaaaa-tggatgacgtaccgtatcccctgtgtatcctgcactgatat----------cttcccgatacgtatccggagagtatccaaat 3403600  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||   |||||||||||||| ||||||| ||||    
T  3403599 attaaattttattttaaaaaaaaataattatccgatactttccga 3403555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 626
Target Start/End: Original strand, 28377001 - 28377128
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || |||||| |||| ||||| ||||| |||| ||  | |||||||| ||||||||| | | ||||||||| ||     
T  28377001 ccccgatacttcaaaa-tggatgacgtatcgtatctcctgtgtatcctgcaccgatacctacccgatacttttcgatacgtaccgggagagtatccaaat 28377099  T
Q  598 attaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| |||| | |||||||||    
T  28377100 attaaattttattttttaagaaaataatt 28377128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 642
Target Start/End: Original strand, 14795078 - 14795150
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| | ||||||||| || |||||||||| |  |||||||||||||||||| ||||| ||||||    
T  14795078 ccgatacgtatccggagagtatccaaatattaaatttttttcttttaaaaaataattatccgatacatcccga 14795150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 44522044 - 44521994
Alignment:
Q  545 tgcactgatatctgtctgatactttccgatacgtatcagaagagtatccga 595  Q
    ||||| ||||||||| ||||| ||||||||||||||||| |||||||||||    
T  44522044 tgcaccgatatctgtttgatattttccgatacgtatcaggagagtatccga 44521994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 554
Target Start/End: Original strand, 14795028 - 14795083
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgata 554  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||    
T  14795028 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgata 14795083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 629
Target Start/End: Original strand, 31226042 - 31226088
Alignment:
Q  583 gaagagtatccgaagattaaattttatgtttttaaaaaataattatc 629  Q
    ||||||||||| || |||||||||||| |||| ||||||||||||||    
T  31226042 gaagagtatccaaatattaaattttattttttcaaaaaataattatc 31226088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 576
Target Start/End: Original strand, 24296515 - 24296580
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatac 576  Q
    |||||||||||| |||||||||  ||||||||| | ||| ||||  ||||||||||||| ||||||    
T  24296515 aaaatggatgacgtaccgtatcatctgcgtatcatacaccgatacttgtctgatacttttcgatac 24296580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 642
Target Start/End: Original strand, 52572280 - 52572336
Alignment:
Q  585 agagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||| || |||||||||||| |||| |||||||||||||| ||||||| ||||    
T  52572280 agagtatccaaatattaaattttat-ttttaaaaaaataattatccgatactttccga 52572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 591
Target Start/End: Original strand, 51674875 - 51674955
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtat 591  Q
    ||||| |||||| || |||||| ||||| |||  ||||||||||  |||| ||||||||||||||  |||||||| |||||    
T  51674875 aaaatagatgacgtatcgtatctcctgcatattctgcactgatacttgtccgatactttccgatatatatcagaaaagtat 51674955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 6e-42; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 498 - 670
Target Start/End: Complemental strand, 13748560 - 13748388
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||| |||| || ||||||| ||||||||| ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||    
T  13748560 ccccgatacttcaaaa-tggttgacgtatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaag 13748462  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    |||||||||||| |||||  ||||||||||||||||||||||||  ||||||||| | |||||||||| ||||||    
T  13748461 attaaattttat-tttttttaaaataattatctgatacttcccgatacgtatcagaaaagtatccgataattatc 13748388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 498 - 672
Target Start/End: Original strand, 28968515 - 28968691
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||| |||||  | |||||| ||||| |||| ||| | ||||||| ||||||||||||||||||||||||||||    
T  28968515 ccccgatacttcaaaa-tggatgacgtaccatatcctttacgtatcctgcaccgatacctgcccgatacttcccgatacgtatcagaagagtatccgaag 28968613  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagt-atccgatcattatcct 672  Q
    |||||||||||| |||  |||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||    
T  28968614 attaaattttatttttaaaaaaaataattatccgatacttcccgatacgtatcaggagagtaatccgatcattatcct 28968691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 498 - 673
Target Start/End: Complemental strand, 55269125 - 55268953
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| ||||  ||||     ||||||||| |||||||||||||| |||||||||||||    
T  55269125 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcatcgata----cctgatacttcccgatacgtatcaggagagtatccgaag 55269031  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||||||| ||||||||||||||||||| |||||||||||  ||| ||||||| |||||||||| |||||||||    
T  55269030 attaaattttatttttttaaaaaataattatccgatacttcccgatacgcatcaggatagtatccgataattatcctg 55268953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 562 - 672
Target Start/End: Original strand, 47642074 - 47642186
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatc 659  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||  ||||||||||||||||||    
T  47642074 gatacttcccaatacgtatcagaagagtatccgaagattaaattttattttataaaaaaataattatctgatacttcccgatacgtatcaggagagtatc 47642173  T
Q  660 cgatcattatcct 672  Q
    |||||||||||||    
T  47642174 cgatcattatcct 47642186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 6134483 - 6134319
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| ||||| ||||  |  ||||||||| |||||| ||||||| |||||||||||||||||||| ||||     
T  6134483 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacatacctgatacttcccgatatgtatcaggagagtatccgaagattaaatattatt 6134384  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||| |||||||||||||| |||||||||||  |  |||||||||||||| |||| |||||||||    
T  6134383 ttttaaaaaaataattatccgatacttcccgatatttatcaggagagtattcgataattatcctg 6134319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 21157830 - 21157666
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||| | ||| | ||| |||| ||||| ||| | ||||||||| |||||||| ||| |||||||||||||||||||||||||     
T  21157830 aaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtatccgaagattaaattttatt 21157731  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||||||| ||||||||| |  |||||||||||||||||| ||| |||||||||    
T  21157730 tttttaaaaaataattatccgatacttcctgatacgtatcaggagagtatctgataattatcctg 21157666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 513 - 673
Target Start/End: Original strand, 25700779 - 25700942
Alignment:
Q  513 aatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtt 612  Q
    ||||||||| |||  |||||| ||||||||| ||||| |||| ||| ||||||||| |  ||||||||||| ||||||||||||||||||||||||| ||    
T  25700779 aatggatgatatattgtatcctctgcgtatcctgcaccgatacctgcctgatacttcctaatacgtatcaggagagtatccgaagattaaattttatttt 25700878  T
Q  613 -tttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
     |||  |||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||    
T  25700879 atttttaaaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctg 25700942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 545 - 673
Target Start/End: Original strand, 19421467 - 19421597
Alignment:
Q  545 tgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--a 642  Q
    ||||| |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||  |    
T  19421467 tgcaccgatacctgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaagtaattatccgatacttcccgata 19421566  T
Q  643 cgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||| ||||  ||| |||||||||    
T  19421567 cgtatcaggagcgtatatgataattatcctg 19421597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 538 - 672
Target Start/End: Complemental strand, 7899793 - 7899656
Alignment:
Q  538 cgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgttttta-aaaaataattatctgatact 636  Q
    |||||| |||||  |||||||  ||||| || |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  7899793 cgtatcctgcacctatatctgcttgatatttcccgatacgtatcagaagagtatccgaagattaaattttatttttttacaaaaataattatccgatact 7899694  T
Q  637 tcccg--acgtatcaggagagtatccgatcattatcct 672  Q
    |||||  ||||||| |||||||||| ||||||||||||    
T  7899693 tcccgatacgtatcgggagagtatctgatcattatcct 7899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 511 - 670
Target Start/End: Complemental strand, 22289822 - 22289661
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||||||||||||| |||||  ||| |||  |||||||| | |||||||||||| |||||||||||||||||||||||||     
T  22289822 aaaatggatgacgtatcgtatcccctgcgtatcctgcaccaatacctgcatgatacttcctgatacgtatcaggagagtatccgaagattaaattttatt 22289723  T
Q  611 tttttaaaaaataattatctgatacttcc--cgacgtatcaggagagtatccgatcattatc 670  Q
    | ||||||||||||| ||||||||||| |    |||||||||||||||||| ||| ||||||    
T  22289722 tctttaaaaaataatcatctgatactttctaatacgtatcaggagagtatctgataattatc 22289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 527 - 673
Target Start/End: Original strand, 45347331 - 45347479
Alignment:
Q  527 cgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaatttta-tgtttttaaaaaataat 625  Q
    |||||||||||| |||| |||||||||| ||| | |||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  45347331 cgtatcccctgc-tatcctgcactgatacctgcccgatacttttcgatacgtatccgaagagtatccgaagattaaattttattttttttaaaaaataat 45347429  T
Q  626 tatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||| ||||||||| |  ||||||||||| |||||| ||| |||||||||    
T  45347430 tatccgatacttcctgatacgtatcaggaaagtatctgataattatcctg 45347479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 41742173 - 41742009
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||  |||||| ||| ||||| ||||| |||| ||  ||||||||| ||||||| |||| | |||||||||||||||||||||||||     
T  41742173 aaaatggatgacgtattgtatcctctgtgtatcctgcaccgataccttcctgatacttcccgatacatatctggagagtatccgaagattaaattttatt 41742074  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||  |||||||||||||| | |||||||||  |||||||||||||||||||||| |||||||||    
T  41742073 tttaaaaaaaataattatccggtacttcccgatacgtatcaggagagtatccgataattatcctg 41742009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 7327717 - 7327860
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | | ||||||| ||     
T  7327717 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagtatccaaat 7327815  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  7327816 attaaattttatttttttaaaaaataattatccgatacatcccga 7327860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 511 - 609
Target Start/End: Original strand, 983211 - 983309
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  983211 aaaatggatgacgtatcgtatcccctgtgtattttgcactgatatctgtctgatacttcccgatacgtatcaggagagtatccaaagattaaattttat 983309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 535 - 673
Target Start/End: Original strand, 39663999 - 39664137
Alignment:
Q  535 ctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgata 634  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||||||||| ||||| |||||||||| |||||| |||||    |||||||||||||||    
T  39663999 ctgcgtatcctgcaccgatacctgtccgatactttccgatacgtatcagaatagtattcgaagattaatttttattttttt--ttaataattatctgata 39664096  T
Q  635 cttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||||||  ||||||||||| |||||||||| |||||||||    
T  39664097 cttcccgatacgtatcaggaaagtatccgataattatcctg 39664137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 20510257 - 20510093
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||||||||||  | |||||||| ||||||||||| || |||| |||| ||||||||||| ||||||||||  ||| |||| ||||||||||||||||     
T  20510257 aaaatggatgacgcatcgtatcccgtgcgtatcttgtaccgatacctgtttgatactttccaatacgtatcaagagaatatctgaagattaaattttatt 20510158  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||  ||||||||||||||||||||||||||  || |||||| | ||||| |||| |||||||||    
T  20510157 tttaaaaaaaataattatctgatacttcccgatacttatcagaaaagtattcgataattatcctg 20510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 28882779 - 28882648
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||| || | |||||||||||||||||||| | ||||||||| || ||||||||||||     
T  28882779 aaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatccaaatattaaattttatt 28882680  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    |||| | ||||||||| || ||||||| ||||    
T  28882679 ttttaagaaaataattttccgatactttccga 28882648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 37996912 - 37996781
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| || | ||| | |||| || |||||||||||| | ||||||||| || ||||||||||||     
T  37996912 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagtatccaaatattaaattttatt 37996813  T
Q  611 tttttaaaaaataattatctgatacttcccga 642  Q
    ||||||||||||||||||| ||||||| ||||    
T  37996812 tttttaaaaaataattatccgatactttccga 37996781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 28704744 - 28704870
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| ||||||||||||||| |||| |||||||||| || || |||||||||| ||| ||||| | ||||||||  || ||||||||||||     
T  28704744 aaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagtatcaaaatattaaattttatt 28704843  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    ||||||||||||||||||| |||||||    
T  28704844 tttttaaaaaataattatccgatactt 28704870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 637
Target Start/End: Original strand, 30226437 - 30226562
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||| ||||||||| ||||| |||| ||| | ||||||||| |||||||||||  |||||||||||||||||||||||||     
T  30226437 aaaatggatgacttatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttctgatacgtatcaagagagtatccgaagattaaattttat- 30226535  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    ||||||||||  |||||||||||||||    
T  30226536 tttttaaaaaccaattatctgatactt 30226562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 38889180 - 38889023
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || ||||||| || || ||| ||||| |||||||| |||||| ||||||||||||||||| ||||||| |||||||||      ||     
T  38889180 aaaatggatgacgtatcgtatcctctacg-atcctgcaccgatatctgcctgataatttccgatacgtatcaggagagtattcgaagatta------att 38889088  T
Q  611 tttttaaaaaataattatctgatacttcccga--cgtatcaggagagtatccgatcattatcctg 673  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||||||||||| |||||||||    
T  38889087 ttttttaaaaataattatttgatacttcccgatgcgtatcaggagagtatccgataattatcctg 38889023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 670
Target Start/End: Complemental strand, 30787675 - 30787501
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| | |||||| || ||||||||||||||||| || |||||||  ||| ||| ||||  ||||||||||||| |||||||||||||    
T  30787675 ccccgatacttcaaaa-tcgatgacgtatcgtatcccctgcgtatcctgtactgatacttgtttgacacttctcgatacgtatcaggagagtatccgaag 30787577  T
Q  598 attaaattttatgtttttaaaa-aataattatctgatacttcccg--acgtatcaggagagtatccgatcattatc 670  Q
    |||||||||||| ||   |||| ||||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  30787576 attaaattttattttaaaaaaataataattatcctatacttcccgatacatatcaggagagtatccgataattatc 30787501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 35389755 - 35389898
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  35389755 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaaat 35389853  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| | ||||||||| || ||||| ||||||    
T  35389854 attaaattttattttttaagaaaataattttccgatacatcccga 35389898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 40497335 - 40497478
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||  || | ||||||| |||||||||||| | ||||||||| ||     
T  40497335 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagtatccaaat 40497433  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||| ||||||| ||||    
T  40497434 attaaattttatttttaaaaaaaataattatccgatactttccga 40497478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 673
Target Start/End: Original strand, 42229709 - 42229845
Alignment:
Q  529 tatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattat 628  Q
    ||||||||||||||| ||||| |||| ||| | ||||||| | ||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||    
T  42229709 tatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcagaagagtatccgaaaattaaattttatttttaaaaaaaataattat 42229808  T
Q  629 ctgatacttcccgacgtatcaggagagtatccgatcattatcctg 673  Q
    | |||        |||||||||||||||||||||| |||||||||    
T  42229809 ccgat--------acgtatcaggagagtatccgataattatcctg 42229845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 512 - 637
Target Start/End: Original strand, 3983715 - 3983841
Alignment:
Q  512 aaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgt 611  Q
    ||||||||||| ||| |||||| | | ||||| ||||| ||||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||| |    
T  3983715 aaatggatgacgtactgtatcctccgtgtatcctgcaccgatacttgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttattt 3983814  T
Q  612 tttt-aaaaaataattatctgatactt 637  Q
    |||| |||||| ||||||| |||||||    
T  3983815 ttttaaaaaaagaattatccgatactt 3983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 498 - 635
Target Start/End: Complemental strand, 42465020 - 42464884
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||| |||||| ||||||||| ||||| |||| ||| | ||||||| |||||||||||| ||||||||||| ||     
T  42465020 ccccgatacttcaaaa-tggatgacgtactgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaat 42464922  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    ||||| ||||||  |||||||||||||||||| |||||    
T  42464921 attaatttttattgttttaaaaaataattatccgatac 42464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 498 - 626
Target Start/End: Original strand, 52121185 - 52121312
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||| |||||| ||| ||||| |||||||  ||||||||||| | ||||||||| ||     
T  52121185 ccccgatacttcaaaa-tggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagtatccaaat 52121283  T
Q  598 attaaattttatgtttttaaaaaataatt 626  Q
    |||||||||||| |||| |||||||||||    
T  52121284 attaaattttattttttaaaaaaataatt 52121312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 634
Target Start/End: Original strand, 52684218 - 52684341
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    ||||| |||||| || |||||| | |||||||| ||||| |||| ||||| ||||||||||||||||||| || |||||||||||| ||||||||||||     
T  52684218 aaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatccgaatattaaattttatt 52684317  T
Q  611 tttttaaaaaataattatctgata 634  Q
    |||  |||||||||||||| ||||    
T  52684318 tttaaaaaaaataattatccgata 52684341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 673
Target Start/End: Complemental strand, 19879194 - 19879040
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| ||| |          ||||| |||| || |||||||||||||||| ||||||||     
T  19879194 aaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcc----------cgatatgtataaggagagtatccgaagattcaattttatt 19879105  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    |||| |||||||||||||| |||||||||||  |||||||| |||||||| |||| |||||||||    
T  19879104 ttttaaaaaaataattatccgatacttcccgatacgtatcatgagagtattcgataattatcctg 19879040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 48122830 - 48122966
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||||||||||||||| |||| ||||| ||||  || | |||| || ||||||||||||   ||||||||| ||     
T  48122830 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagagtatccaaat 48122928  T
Q  598 attaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  48122929 attaaattttatttttttaaaaaataattatccgatac 48122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 1679811 - 1679668
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||||| || |||||||||| |||| |||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  1679811 ccccgatacttcaaaa-tggataacgtaccgtatccactgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 1679713  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||| ||||| ||||||    
T  1679712 attaaattttatttttaaaaaaaataattatccgatacatcccga 1679668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 2122709 - 2122890
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccct---gcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccg 594  Q
    |||| ||||||||||| |||||||| ||  |||||||||   ||||||| ||||| ||||  || ||||||||| |||||||||||||| |||| |||||    
T  2122709 ccccgatacttcaaaa-tggatgacgtattgtatcccctcctgcgtatcatgcaccgatacttgcctgatacttcccgatacgtatcaggagagaatccg 2122807  T
Q  595 aagattaaattttatgtt--tttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||||||||||||| ||     |||||| |||||||||||||||| ||  ||||||||| ||| |||||||| |||||||||    
T  2122808 aagattaaattttattttaaaaaaaaaaagaattatctgatacttcgcgatacgtatcagtagactatccgataattatcctg 2122890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 6418384 - 6418291
Alignment:
Q  52 caaactgagatctgccaaggaaatgtagaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagagta 146  Q
    |||||| |||||||||||||||||  ||||  |||||||| | ||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  6418384 caaacttagatctgccaaggaaatagagaactatttagag-gcaatataaaatatgtgaaatatgaaatttgagtaacaatggaaattaagagta 6418291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 6822548 - 6822463
Alignment:
Q  53 aaactgagatctgccaaggaaatgtagaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaat 138  Q
    |||||||||||||||||||||||  ||||||||| |||| |||||||||||||||| |||||||| ||||||| || |||||||||    
T  6822548 aaactgagatctgccaaggaaataaagaaagattcagagggaaatataaaatatgtcaaatatgagatttgagcaaaaacggaaat 6822463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 513 - 637
Target Start/End: Original strand, 22310724 - 22310848
Alignment:
Q  513 aatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtt 612  Q
    |||||||||| |||||||||||||| ||||| ||||| |||| ||| ||||||||| ||||||||||||   ||||||||  || |||||||||||| ||    
T  22310724 aatggatgacgtaccgtatcccctgtgtatcctgcaccgatacctgcctgatacttcccgatacgtatcgatagagtatcaaaatattaaattttatttt 22310823  T
Q  613 tttaaaaaataattatctgatactt 637  Q
    || | ||||||||| || |||||||    
T  22310824 ttaagaaaataattttccgatactt 22310848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 562 - 637
Target Start/End: Complemental strand, 10225212 - 10225137
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||||||||||| | ||||||||| || |||||||||||| |||| |||||||||||||| |||||||    
T  10225212 gatactttccgatacgtatccggagagtatccaaatattaaattttattttttaaaaaaataattatccgatactt 10225137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 637
Target Start/End: Complemental strand, 52505934 - 52505808
Alignment:
Q  510 aaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||||||  ||| ||||||| |||||||| ||||| |||| | | | |||| || |||||||||||| ||||||||||| || ||||||||||||    
T  52505934 aaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgataccggcccgatatttcccgatacgtatccgaagagtatccaaatattaaattttat 52505836  T
Q  610 gtttttaaaaaataattatctgatactt 637  Q
     |||  |||||||||||||| |||||||    
T  52505835 ttttcaaaaaaataattatccgatactt 52505808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 592
Target Start/End: Original strand, 29915878 - 29915959
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatc 592  Q
    ||||| |||||| || ||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||| | ||||||    
T  29915878 aaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtctgatacttcccgatacgtatcaggatagtatc 29915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 592
Target Start/End: Original strand, 29965031 - 29965112
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatc 592  Q
    ||||| |||||| || ||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||| | ||||||    
T  29965031 aaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtctgatacttcccgatacgtatcaggatagtatc 29965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 642
Target Start/End: Complemental strand, 2567448 - 2567368
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    ||||||| ||||||||||||   |||||||||||| |||||||||||| |||| |||||||||||||| ||||||| ||||    
T  2567448 gatacttcccgatacgtatccagagagtatccgaatattaaattttattttttaaaaaaataattatccgatactttccga 2567368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 7575908 - 7575987
Alignment:
Q  53 aaactgagatctgccaaggaaatgtagaaagatttagagcgaaatataaa-atatgtgaaatatgaaatttgagtaacaac 132  Q
    ||||||||||||| ||||||||| ||||||||||||||| | |||| ||| | ||||||||||||||||||||||||||||    
T  7575908 aaactgagatctgacaaggaaatatagaaagatttagag-gcaataaaaataaatgtgaaatatgaaatttgagtaacaac 7575987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 570 - 637
Target Start/End: Original strand, 5271545 - 5271611
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||||| ||||||| |||||||    
T  5271545 ccgatacgtatcaggagagtatccggagattaaattttatttttttaaaaaa-aattatccgatactt 5271611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 637
Target Start/End: Complemental strand, 25937165 - 25937039
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || |||||| |||||||||| | |||  |||  || | |||||||||||||||||||| | ||||||||  || ||||||||||||     
T  25937165 aaaatggatgacgtatcgtatctcctgcgtatcctacaccaatacatgcccgatactttccgatacgtatctggagagtatctaaatattaaattttatt 25937066  T
Q  611 tttttaaaaaataattatctgatactt 637  Q
    |||  ||||| |||||||| |||||||    
T  25937065 tttaaaaaaattaattatccgatactt 25937039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 642
Target Start/End: Complemental strand, 47750991 - 47750859
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatc--agaagagtatccgaagattaaatttta 608  Q
    |||||||||||| |||  ||||| ||||||||| ||||| |||| |||   |||||||| | ||||||||   |||||||||||  |  |||||||||||    
T  47750991 aaaatggatgacgtactatatcctctgcgtatcctgcaccgatagctgctcgatacttttcaatacgtatattagaagagtatcaaatcattaaatttta 47750892  T
Q  609 tgtttttaaaaaataattatctgatacttcccga 642  Q
    | |||||||||| |||||||||||||||||||||    
T  47750891 tatttttaaaaa-taattatctgatacttcccga 47750859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 6552226 - 6552162
Alignment:
Q  78 agaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaaga 143  Q
    |||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  6552226 agaaagatttagag-gcaatataaaaaatatgaaatatgaaatttgagtaacaacggaaattaaga 6552162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 673
Target Start/End: Complemental strand, 19349642 - 19349541
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcatt 667  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||     |||||||||  |||||||||||  ||||||||||| || ||||||| |||    
T  19349642 ccgatacgtatcagaagagtatacgaagattaaattttttttttt----caataattattcgatacttcccgatacgtatcaggaaagaatccgataatt 19349547  T
Q  668 atcctg 673  Q
    ||||||    
T  19349546 atcctg 19349541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 22611487 - 22611354
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| || ||||| |||| ||| |          ||||||||||| | ||||||||| ||     
T  22611487 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtttcctgcaccgatacctgcc----------cgatacgtatccggagagtatccaaat 22611399  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| |||||||||||||| ||||||| ||||    
T  22611398 attaaattttattttttaaaaaaataattatccgatactttccga 22611354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 45533030 - 45532957
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    ||||||| |||||||||||| ||||||||||| || |||||||||||| |||  |||||||||||||| |||||    
T  45533030 gatacttcccgatacgtatccgaagagtatccaaatattaaattttatttttaaaaaaaataattatccgatac 45532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 635
Target Start/End: Original strand, 53192564 - 53192629
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    |||||||||||| | ||||||||| || |||||||||||| ||||||||||||||||||| |||||    
T  53192564 ccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatccgatac 53192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 6471941 - 6471854
Alignment:
Q  56 ctgagatctgccaaggaaatgtagaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagag 144  Q
    ||||||||||||||||||||  | ||| |||||||| | |||||||||||||| |||||||||||| ||||| ||||| |||| |||||    
T  6471941 ctgagatctgccaaggaaataaaaaaatatttagag-gcaatataaaatatgtcaaatatgaaattagagtaccaacgaaaattaagag 6471854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 6749803 - 6749890
Alignment:
Q  56 ctgagatctgccaaggaaatgtagaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagag 144  Q
    ||||||||||||||||||||  | ||| |||||||| | |||||||||||||| |||||||||||| ||||| ||||| |||| |||||    
T  6749803 ctgagatctgccaaggaaataaaaaaatatttagag-gcaatataaaatatgtcaaatatgaaattagagtaccaacgaaaattaagag 6749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 7588769 - 7588835
Alignment:
Q  78 agaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagagta 146  Q
    |||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||| |||||||    
T  7588769 agaaagatttagag-gaaatataaaatatg-gcaacatgaaatttgagtaacaacggaaattaagagta 7588835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 21382387 - 21382307
Alignment:
Q  557 tgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||||| | ||||||||||||| ||||||||  | |||||||||||||| ||||||||||| |||| || |||||||    
T  21382387 tgtctgatacgtcccgatacgtatcaaaagagtatttggagattaaattttatttttttaaaaaacaattgtccgatactt 21382307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 570 - 673
Target Start/End: Complemental strand, 13353238 - 13353132
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataa-ttatctgatacttcccg--acgtatcaggagagtatccgatcat 666  Q
    |||||||||||||  || ||||||||||| |||||||||| |    |||||| || |||||||||||||||||  |||||||||||||||||||||| ||    
T  13353238 ccgatacgtatcaagagcgtatccgaagaataaattttatttaaaaaaaaaaaaatttatctgatacttcccgatacgtatcaggagagtatccgataat 13353139  T
Q  667 tatcctg 673  Q
     ||||||    
T  13353138 aatcctg 13353132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 637
Target Start/End: Original strand, 15768995 - 15769070
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatactt 637  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||  || |||| |||||| ||||||| |||||||    
T  15768995 gatacttttcgatacgtatcacaagagtatccgaaaattaaattaaattttttaaaaaaacaattatccgatactt 15769070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 662
Target Start/End: Original strand, 48334019 - 48334124
Alignment:
Q  561 tgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttt--taaaaaataattatctgatacttcccg--acgtatcaggagagt 656  Q
    ||||| || ||||||| ||| | |||||||| ||||||||||||||||| ||||   |||||||||||||||||||||||| |  |||||||| || |||    
T  48334019 tgatatttcccgatacatattaaaagagtattcgaagattaaattttattttttaaaaaaaaataattatctgatacttcctgatacgtatcaagaaagt 48334118  T
Q  657 atccga 662  Q
    ||||||    
T  48334119 atccga 48334124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 6510827 - 6510781
Alignment:
Q  100 aaaatatgtgaaatatgaaatttgagtaacaacggaaataaagagta 146  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||    
T  6510827 aaaaaatgtgaaatatgaaatttgagtaaaaacggaaataaagagta 6510781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 640
Target Start/End: Complemental strand, 25322525 - 25322444
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttccc 640  Q
    ||||||||||| ||||||||||| ||||||||||  |  |||||||||||| || ||  |||||||||||| ||||||||||    
T  25322525 tctgatacttttcgatacgtatcggaagagtatcaaaccattaaattttattttattttaaaataattatccgatacttccc 25322444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 662
Target Start/End: Original strand, 48333101 - 48333181
Alignment:
Q  584 aagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccga 662  Q
    |||||||| ||||||||||||||||| ||   ||||||||||||| |||||||||| |  ||||||||||| |||||||||    
T  48333101 aagagtattcgaagattaaattttatattaaaaaaaaataattatttgatacttcctgatacgtatcaggaaagtatccga 48333181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 634
Target Start/End: Original strand, 1528568 - 1528631
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgata 634  Q
    |||||||||||| | ||||||||| || |||||||||||| |||| |||||||||||||| ||||    
T  1528568 ccgatacgtatccggagagtatccaaatattaaattttat-ttttaaaaaaataattatccgata 1528631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 48333147 - 48333195
Alignment:
Q  561 tgatactttccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    |||||||| | |||||||||||| | |||||||||||||||||||||||    
T  48333147 tgatacttcctgatacgtatcaggaaagtatccgaagattaaattttat 48333195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7588676 - 7588715
Alignment:
Q  1 tacctgtaagtgtgagaacaaacaagctaagatctttgtc 40  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  7588676 tacctgaaagtgtgagaacaaacaaactaagatctttgtc 7588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 53165551 - 53165512
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttat 609  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  53165551 ccgatacgtatcagaagagcatccgaagattatattttat 53165512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 626
Target Start/End: Original strand, 33239992 - 33240082
Alignment:
Q  536 tgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataatt 626  Q
    |||||||| ||||  |||| ||| | ||||||| |||||||||||| | ||||||||| || |||| ||||||| |||| | |||||||||    
T  33239992 tgcgtatcctgcatcgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatattatattttattttttaagaaaataatt 33240082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 474
Target Start/End: Original strand, 6750040 - 6750109
Alignment:
Q  402 agaaaatgaatgagatgatgtaccttttgttatcaacggattgaagacgtatatacgcgtctttccacacacc 474  Q
    |||||||||||||||| |||||  |||||| |||||| ||||||| |  |||||||||||||||| |||||||    
T  6750040 agaaaatgaatgagataatgtaatttttgt-atcaactgattgaaca--tatatacgcgtctttctacacacc 6750109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 598
Target Start/End: Original strand, 28548126 - 28548187
Alignment:
Q  537 gcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaaga 598  Q
    |||||| ||| |||||||||||  ||||||||  | ||||||||||| ||||||||||||||    
T  28548126 gcgtattttgtactgatatctgcatgatacttctctatacgtatcaggagagtatccgaaga 28548187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 48334088 - 48334137
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccgaagattaaatttta 608  Q
    |||||||||| | |||||||||||  | ||||||||||||||||||||||    
T  48334088 tctgatacttcctgatacgtatcaagaaagtatccgaagattaaatttta 48334137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 6584828 - 6584761
Alignment:
Q  76 gtagaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagag 144  Q
    ||||| |||||||||| |||||||||||||||  ||||| |||||||||||| ||| | |||| |||||    
T  6584828 gtagagagatttagag-gaaatataaaatatgccaaatacgaaatttgagtaccaaagtaaattaagag 6584761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6950278 - 6950314
Alignment:
Q  1 tacctgtaagtgtgagaacaaacaagctaagatcttt 37  Q
    |||||| |||||||||||||||||| |||||||||||    
T  6950278 tacctgaaagtgtgagaacaaacaaactaagatcttt 6950314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 6950544 - 6950588
Alignment:
Q  402 agaaaatgaatgagatgatgtaccttttgttatcaacggattgaa 446  Q
    |||||||||||||||| ||||||||||| | |||||| |||||||    
T  6950544 agaaaatgaatgagataatgtaccttttttgatcaactgattgaa 6950588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 595
Target Start/End: Complemental strand, 13353179 - 13353143
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||| |||||||||||||| |||||||||||    
T  13353179 tctgatacttcccgatacgtatcaggagagtatccga 13353143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 595
Target Start/End: Original strand, 47642140 - 47642176
Alignment:
Q  559 tctgatactttccgatacgtatcagaagagtatccga 595  Q
    |||||||||| |||||||||||||| |||||||||||    
T  47642140 tctgatacttcccgatacgtatcaggagagtatccga 47642176  T

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Target: scaffold0285 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 673
Target Start/End: Original strand, 13267 - 13430
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||| || |||||| |||||||||| ||||| |||| ||||| ||||||| |||||||||||||  |||||||| ||||||||||||||||     
T  13267 aaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatacctgtcagatacttcccgatacgtatcaagagagtatctgaagattaaattttat- 13365  T
Q  611 tttttaaaaaataattatctgatacttcccg--acgtatcaggagagtatccgatcattatcctg 673  Q
    ||||| ||||||||||||| ||| ||||| |  || |||||| ||||||| |||| |||||||||    
T  13366 ttttttaaaaataattatccgatgcttcctgatacttatcagaagagtattcgataattatcctg 13430  T

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Target: scaffold0640 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 8205 - 8062
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  8205 ccccgatacttcaaaa-tggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaat 8107  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||    
T  8106 attaaattttatttttaaaaaaaataattatctgatactttccga 8062  T

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Target: scaffold0250 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 498 - 642
Target Start/End: Original strand, 5517 - 5660
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||| ||| |||||||||||||||||||| ||||| |||| ||| | ||||||| |||||||||||| | ||||||||| ||     
T  5517 ccccgatacttcaaaa-tggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaaat 5615  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| |||| | ||||||||| || ||||||| ||||    
T  5616 attaaattttattttttaagaaaataattttccgatactttccga 5660  T

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Target: scaffold0177 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 25591 - 25518
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    ||||||| |||||||||||| | ||||||||| || |||||||||||| |||||||||||||||||||||||||    
T  25591 gatacttcccgatacgtatccggagagtatccaaatattaaattttatttttttaaaaaataattatctgatac 25518  T

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Target: scaffold0445 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 8776 - 8829
Alignment:
Q  93 gaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagagta 146  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  8776 gaaatataaaaaatgtgaaatatgaaatttgagtaacaacggaaattaagagta 8829  T

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Target: scaffold0445; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 9028 - 9076
Alignment:
Q  318 tatcaactgagagagcatatataatatggatagacttagaggaagcaca 366  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||    
T  9028 tatcaactgactgaccatatataatatggatagacttagaggaagcaca 9076  T

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Target: scaffold0037 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 634
Target Start/End: Complemental strand, 27894 - 27769
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| |||||||| ||||||||||||||| |||| ||||| |||| |||||          ||||||||||| | ||||||||| ||     
T  27894 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcatatcctgcaccgatacctgtc----------cgatacgtatccgcagagtatccaaat 27806  T
Q  598 attaaattttatgtttttaaaaaataattatctgata 634  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  27805 attaaattttatttttttaaaaaataattatccgata 27769  T

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Target: scaffold0425 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 5196 - 5129
Alignment:
Q  78 agaaagatttagagcgaaatataaaatatgtgaaatatgaaatttgagtaacaacggaaataaagagta 146  Q
    |||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  5196 agaaagatttagag-gcaatataaaaaatatgaaatatgaaatttgagtaacaacggaaattaagagta 5129  T

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Target: scaffold0060 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 498 - 642
Target Start/End: Complemental strand, 30557 - 30414
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaag 597  Q
    |||| ||||||||||| ||||| || ||||||||  |||||||||| | ||| |||| ||| | ||||||| | |||||||||| | ||||||||| ||     
T  30557 ccccgatacttcaaaa-tggataacgtaccgtatttcctgcgtatcctacaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaat 30459  T
Q  598 attaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| ||   |||||||||||||| ||||||| ||||    
T  30458 attaaattttattttaaaaaaaaataattatccgatactttccga 30414  T

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Target: scaffold0240 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 626
Target Start/End: Original strand, 10617 - 10732
Alignment:
Q  511 aaaatggatgacataccgtatcccctgcgtatcttgcactgatatctgtctgatactttccgatacgtatcagaagagtatccgaagattaaattttatg 610  Q
    |||||||||||  |||| ||||||||||||||| ||||| ||||  || | |||||||  ||||||||||||| |||||||| ||||||||||| |||      
T  10617 aaaatggatgatgtaccatatcccctgcgtatcatgcaccgatacttgcccgatacttctcgatacgtatcaggagagtatcagaagattaaatgttact 10716  T
Q  611 tttttaaaaaataatt 626  Q
    ||||| ||||| ||||    
T  10717 ttttttaaaaacaatt 10732  T

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Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 635
Target Start/End: Complemental strand, 42126 - 42053
Alignment:
Q  562 gatactttccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatac 635  Q
    ||||||| ||||||||||||   ||||||||| || |||||||||||| |||| |||||||||||||| |||||    
T  42126 gatacttcccgatacgtatctagagagtatccaaatattaaattttattttttaaaaaaataattatccgatac 42053  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 642
Target Start/End: Complemental strand, 44653 - 44581
Alignment:
Q  570 ccgatacgtatcagaagagtatccgaagattaaattttatgtttttaaaaaataattatctgatacttcccga 642  Q
    |||||||||||| | ||||||||| || |||||||||| |  |||||||||||||||||| ||||| ||||||    
T  44653 ccgatacgtatccggagagtatccaaatattaaatttttttcttttaaaaaataattatccgatacatcccga 44581  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 554
Target Start/End: Complemental strand, 44703 - 44648
Alignment:
Q  498 cccccatacttcaaaaatggatgacataccgtatcccctgcgtatcttgcactgata 554  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||    
T  44703 ccccgatacttcaaaa-tggatgacgtaccgtatcccctgcgtatcctgcaccgata 44648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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