View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15026_low_5 (Length: 591)
Name: NF15026_low_5
Description: NF15026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15026_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 511; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 10 - 553
Target Start/End: Original strand, 36799071 - 36799614
Alignment:
| Q |
10 |
gcataggtaggtgattaattaggataaagaaaataataataatatcaagcaataattgagtagcttaataaactagctcagaacttcatatgcttcaaag |
109 |
Q |
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| T |
36799071 |
gcataggtaggtgattaattaggataaagaaaataataataatatcaagcaataattgagtagcttaataaactagctcagaacttcatatgcttcaaag |
36799170 |
T |
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| Q |
110 |
atgctactaaactcttattannnnnnngatgaaccaaactcttattattgtttctttacattttaatcataaactattaattaacatattggtttaatat |
209 |
Q |
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| T |
36799171 |
atgctaccaaactcttattatttttttgatgaaccaaactcttattattgtttctttacattttaatcataaactattaattaacatattggtttaatat |
36799270 |
T |
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| Q |
210 |
aatgatttttgtacgtgccttaacagctttgggtggctctgatcctttcttggatccacttgtttgcggagaaactaaatccatgctagcctataaataa |
309 |
Q |
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| T |
36799271 |
aatgatttttgtacgtgccttaacagctttgggtggctctgatcctttcttggatccacttgtttgcggagaaactaaatccatgctagcctataaataa |
36799370 |
T |
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| Q |
310 |
ttaattaaaaacatattaatatgaagtgtaacaaaataagagagtagtgtgtaacacaattcatcgtgaaataattattaactacaccttagaattggac |
409 |
Q |
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| T |
36799371 |
ttaattaaaaacacattaatatgaagtgtaacaaaataagagagtagtgtgtaacacaattcatcgtgaaataattattaactacaccttagaattggac |
36799470 |
T |
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| Q |
410 |
gatgatggctctacatgcataggctgagaaggaaaaatgttaagagttggtggcctcattcctgatgttgaattctctgtggagacgcaaatatttacca |
509 |
Q |
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| T |
36799471 |
gatgatggctctacatgcataggctgagaaggaaaaatgttaagagttggtggcctcattcctgatgttgaattctctgtggagatgcaaatatttacca |
36799570 |
T |
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| Q |
510 |
aattcagcaacattaaatagttatgtatgtataacataaaaata |
553 |
Q |
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| T |
36799571 |
aattcagcaacattaaatagttatgtatgtataacataaaaata |
36799614 |
T |
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