View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15027_low_2 (Length: 272)
Name: NF15027_low_2
Description: NF15027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15027_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 45387108 - 45386947
Alignment:
| Q |
4 |
tagcatatcatagagtactactatagaggtgtactttagcagtagtatacaaaagcgagagagaaggcaaagacggcataagtgatagttgcacgaagct |
103 |
Q |
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| T |
45387108 |
tagcatatcatagagtagtactatagaggtgtactttagcagtagtatacaaaagcgagagagaaggcaaagacggcataagtgatagttgcacgaagct |
45387009 |
T |
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| Q |
104 |
tatcttagaggcagattccttttgtgaaacttgaagccatgggagaggtttttaatgataac |
165 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
45387008 |
tatcttagaggcagattccttttgtgaaacttgaagccatgggagaggtttctaatgataac |
45386947 |
T |
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