View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15029_high_15 (Length: 210)
Name: NF15029_high_15
Description: NF15029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15029_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 42841007 - 42841204
Alignment:
| Q |
1 |
tcacacgatcataaccaacttgataataatgggcccaccaatcattcgaagaatgattaggtttaaccaaaggaataaacttgaattcctcggtagtcgg |
100 |
Q |
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| T |
42841007 |
tcacacgatcataac-aacttgataataatgggcccaccaatcattcgaagaatgattaggtttaaccaaaggaataaacttgaagtcctcggtagtcgg |
42841105 |
T |
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| Q |
101 |
gttccacaatataaatcttgtatctctatcttcaatgtcatgatatttgagacaaagagtgccattaaaactatgagaacgcacaatttcataacctat |
199 |
Q |
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| T |
42841106 |
gttccacaatataaatcttgtatctctatcttcaatgttatgatatttgagacaaagagtgccattaaaactaagagaaagcacaatttcgaaacctat |
42841204 |
T |
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