View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1502_high_9 (Length: 211)
Name: NF1502_high_9
Description: NF1502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1502_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 7044358 - 7044538
Alignment:
| Q |
15 |
aagaacaaaagaagcttctggttagcaacaaataacaaagatatttcgagaaaaatataacttggacaatgcacacaaacctccagaactccaatccaag |
114 |
Q |
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| T |
7044358 |
aagaacaaaagaagcttctggttagcaacaaataacaaagatatttcgagaaaaatataactcggacaatgcacacaaacctccagaactccaatccaag |
7044457 |
T |
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| Q |
115 |
agcaaatttgctgtcaatgtaatcaaccacgaaaagaaccaattggcaagtgttgcaaaacttccggcaaggcctttgatg |
195 |
Q |
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| T |
7044458 |
agcaaatttgctgtcaatgtaatcaaccacgaaaagaaccaattggcaagtgttgcaaaacttccggcaaggcctttgatg |
7044538 |
T |
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