View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15030_low_9 (Length: 277)

Name: NF15030_low_9
Description: NF15030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15030_low_9
NF15030_low_9
[»] chr8 (77 HSPs)
chr8 (18-269)||(23286271-23286522)
chr8 (108-203)||(12670250-12670357)
chr8 (108-203)||(30454097-30454204)
chr8 (108-165)||(13160728-13160786)
chr8 (108-165)||(45071291-45071349)
chr8 (108-165)||(36720822-36720881)
chr8 (108-165)||(19729368-19729425)
chr8 (108-165)||(28817676-28817735)
chr8 (108-165)||(29877120-29877179)
chr8 (112-165)||(44530179-44530234)
chr8 (110-165)||(5689659-5689716)
chr8 (108-165)||(24365109-24365169)
chr8 (108-153)||(20869560-20869605)
chr8 (108-162)||(29521738-29521794)
chr8 (108-165)||(5135339-5135398)
chr8 (65-109)||(30454233-30454277)
chr8 (108-165)||(35261705-35261764)
chr8 (66-109)||(7136667-7136710)
chr8 (66-109)||(12670386-12670429)
chr8 (66-109)||(35261633-35261676)
chr8 (108-204)||(23000227-23000327)
chr8 (64-109)||(2626471-2626516)
chr8 (108-165)||(26954158-26954220)
chr8 (64-105)||(39461138-39461179)
chr8 (112-165)||(8483988-8484043)
chr8 (65-109)||(13160655-13160699)
chr8 (65-109)||(17823529-17823573)
chr8 (61-109)||(24245400-24245448)
chr8 (65-109)||(28817764-28817808)
chr8 (65-109)||(36720749-36720793)
chr8 (122-165)||(44742568-44742612)
chr8 (122-165)||(2626564-2626607)
chr8 (108-165)||(6760848-6760909)
chr8 (112-165)||(7136577-7136634)
chr8 (122-165)||(8897814-8897857)
chr8 (122-165)||(12625932-12625975)
chr8 (108-154)||(18164821-18164868)
chr8 (66-109)||(20869634-20869677)
chr8 (108-165)||(20869949-20870010)
chr8 (160-203)||(26102609-26102652)
chr8 (65-108)||(40605044-40605087)
chr8 (108-165)||(43942350-43942411)
chr8 (66-109)||(44530103-44530146)
chr8 (122-164)||(10857871-10857913)
chr8 (127-165)||(26457776-26457814)
chr8 (64-109)||(25250474-25250519)
chr8 (122-162)||(389687-389727)
chr8 (108-165)||(17823602-17823661)
chr8 (108-153)||(39461058-39461105)
chr8 (62-109)||(6760773-6760819)
chr8 (122-165)||(11000999-11001042)
chr8 (160-203)||(12625982-12626025)
chr8 (109-166)||(17250924-17250985)
chr8 (70-109)||(20284211-20284250)
chr8 (70-109)||(21070840-21070879)
chr8 (160-203)||(27468092-27468135)
chr8 (66-109)||(29521823-29521866)
chr8 (160-203)||(35261771-35261814)
chr8 (160-203)||(39460994-39461037)
chr8 (162-204)||(17823670-17823712)
chr8 (122-165)||(20284119-20284164)
chr8 (122-165)||(21070747-21070792)
chr8 (75-109)||(28407379-28407413)
chr8 (66-108)||(45071219-45071261)
chr8 (83-112)||(8897899-8897928)
chr8 (112-166)||(22598187-22598243)
chr8 (170-203)||(27037650-27037683)
chr8 (162-203)||(31457266-31457307)
chr8 (122-155)||(36918166-36918199)
chr8 (66-103)||(42840863-42840900)
chr8 (112-154)||(44781567-44781611)
chr8 (167-203)||(6760923-6760959)
chr8 (108-153)||(16225045-16225092)
chr8 (160-204)||(16225113-16225157)
chr8 (65-109)||(18164897-18164941)
chr8 (167-203)||(20870024-20870060)
chr8 (112-164)||(35105953-35106008)
[»] chr3 (88 HSPs)
chr3 (122-203)||(4495676-4495757)
chr3 (108-204)||(31831247-31831344)
chr3 (108-203)||(31592897-31593004)
chr3 (112-203)||(54032571-54032664)
chr3 (108-203)||(1217138-1217245)
chr3 (109-203)||(15797271-15797377)
chr3 (118-203)||(34771364-34771461)
chr3 (108-204)||(39203564-39203672)
chr3 (108-165)||(22122967-22123024)
chr3 (132-203)||(43956472-43956543)
chr3 (108-165)||(22609814-22609872)
chr3 (108-165)||(47624090-47624148)
chr3 (108-194)||(7696901-7696994)
chr3 (108-165)||(6411872-6411930)
chr3 (108-165)||(16735489-16735547)
chr3 (108-165)||(26869755-26869813)
chr3 (112-165)||(40272862-40272917)
chr3 (109-160)||(9276313-9276366)
chr3 (108-165)||(54484738-54484798)
chr3 (64-109)||(8247827-8247872)
chr3 (65-109)||(7697023-7697067)
chr3 (108-165)||(12914085-12914144)
chr3 (65-109)||(16735416-16735460)
chr3 (108-165)||(26573175-26573234)
chr3 (65-109)||(40272950-40272994)
chr3 (108-165)||(10795473-10795534)
chr3 (66-109)||(10870089-10870132)
chr3 (108-165)||(13628840-13628901)
chr3 (66-109)||(13730742-13730785)
chr3 (108-165)||(14987005-14987066)
chr3 (160-203)||(30452909-30452952)
chr3 (108-162)||(45620881-45620938)
chr3 (108-165)||(45786264-45786325)
chr3 (108-165)||(46421085-46421146)
chr3 (66-109)||(46421175-46421218)
chr3 (108-165)||(49013523-49013584)
chr3 (109-165)||(52428527-52428585)
chr3 (66-109)||(52926348-52926391)
chr3 (110-165)||(33926133-33926190)
chr3 (108-165)||(34420693-34420753)
chr3 (66-106)||(6411962-6412002)
chr3 (65-109)||(9607178-9607222)
chr3 (61-109)||(12914173-12914221)
chr3 (69-109)||(21874999-21875039)
chr3 (110-203)||(26292382-26292487)
chr3 (66-109)||(4495802-4495845)
chr3 (160-203)||(6242285-6242328)
chr3 (108-165)||(13730652-13730713)
chr3 (108-165)||(29366770-29366831)
chr3 (122-165)||(31904907-31904950)
chr3 (122-165)||(353399-353444)
chr3 (64-106)||(1217064-1217106)
chr3 (160-202)||(22122918-22122960)
chr3 (67-109)||(25517311-25517353)
chr3 (67-109)||(29366860-29366902)
chr3 (108-163)||(8247739-8247798)
chr3 (64-105)||(9276248-9276289)
chr3 (130-163)||(52926271-52926304)
chr3 (112-165)||(53996615-53996671)
chr3 (122-162)||(7943054-7943094)
chr3 (65-109)||(22609742-22609785)
chr3 (110-165)||(33235581-33235639)
chr3 (65-109)||(39203491-39203535)
chr3 (108-166)||(43114917-43114979)
chr3 (112-165)||(45948888-45948943)
chr3 (160-203)||(10484616-10484659)
chr3 (110-166)||(19731052-19731110)
chr3 (110-166)||(19751628-19751686)
chr3 (164-203)||(24851301-24851340)
chr3 (112-165)||(45139526-45139583)
chr3 (160-203)||(47624213-47624256)
chr3 (160-203)||(54484805-54484848)
chr3 (161-203)||(516527-516569)
chr3 (122-164)||(8410918-8410960)
chr3 (64-109)||(13628930-13628976)
chr3 (161-203)||(24577950-24577992)
chr3 (161-203)||(24578040-24578082)
chr3 (160-201)||(353351-353392)
chr3 (108-154)||(516457-516505)
chr3 (65-109)||(5173858-5173903)
chr3 (65-98)||(12525385-12525418)
chr3 (69-106)||(23871418-23871455)
chr3 (162-203)||(40390357-40390398)
chr3 (112-165)||(54374395-54374451)
chr3 (108-165)||(55401224-55401284)
chr3 (108-153)||(9607251-9607298)
chr3 (167-203)||(13730602-13730638)
chr3 (81-109)||(26869698-26869726)
[»] scaffold0015 (1 HSPs)
scaffold0015 (108-203)||(48634-48741)
[»] chr7 (81 HSPs)
chr7 (108-203)||(21172009-21172116)
chr7 (108-203)||(32758287-32758394)
chr7 (108-203)||(42391100-42391207)
chr7 (108-204)||(10693072-10693180)
chr7 (112-204)||(48735121-48735225)
chr7 (108-166)||(2662984-2663042)
chr7 (69-165)||(35787319-35787416)
chr7 (108-202)||(42476899-42477005)
chr7 (112-203)||(31591109-31591212)
chr7 (108-165)||(38604553-38604611)
chr7 (108-165)||(2541069-2541128)
chr7 (108-165)||(23419724-23419783)
chr7 (108-162)||(11741821-11741875)
chr7 (108-165)||(19265841-19265899)
chr7 (112-165)||(33871960-33872014)
chr7 (108-166)||(19426938-19426998)
chr7 (108-166)||(42798695-42798755)
chr7 (64-109)||(48735259-48735304)
chr7 (65-109)||(2541158-2541202)
chr7 (112-165)||(11617638-11617693)
chr7 (108-165)||(27629660-27629719)
chr7 (65-109)||(32758214-32758258)
chr7 (122-165)||(7879680-7879723)
chr7 (110-164)||(13805130-13805185)
chr7 (66-109)||(22699108-22699151)
chr7 (108-162)||(34626261-34626316)
chr7 (66-109)||(42798623-42798666)
chr7 (66-109)||(43557426-43557469)
chr7 (66-109)||(47077991-47078034)
chr7 (108-165)||(47716485-47716546)
chr7 (67-109)||(5180295-5180337)
chr7 (67-109)||(18326989-18327031)
chr7 (108-165)||(40463903-40463961)
chr7 (66-108)||(46354148-46354190)
chr7 (111-165)||(28362195-28362251)
chr7 (64-109)||(35334952-35334997)
chr7 (64-109)||(42495973-42496018)
chr7 (64-109)||(42805476-42805521)
chr7 (114-165)||(18512503-18512555)
chr7 (122-162)||(19266492-19266532)
chr7 (66-106)||(21172148-21172188)
chr7 (64-108)||(34626346-34626390)
chr7 (108-165)||(48123534-48123593)
chr7 (122-165)||(8148995-8149038)
chr7 (122-165)||(14099056-14099099)
chr7 (122-165)||(14409073-14409116)
chr7 (70-109)||(14732960-14732999)
chr7 (108-165)||(42805550-42805611)
chr7 (108-165)||(43557498-43557559)
chr7 (112-165)||(46354224-46354281)
chr7 (110-165)||(1408485-1408542)
chr7 (108-202)||(18747512-18747621)
chr7 (108-154)||(16341304-16341352)
chr7 (132-165)||(27889366-27889399)
chr7 (108-165)||(47077905-47077962)
chr7 (65-109)||(42476826-42476870)
chr7 (66-109)||(2663069-2663112)
chr7 (66-109)||(7193039-7193082)
chr7 (122-166)||(22699017-22699063)
chr7 (122-165)||(28078182-28078225)
chr7 (112-162)||(32233188-32233239)
chr7 (122-165)||(35334866-35334909)
chr7 (160-203)||(42798761-42798804)
chr7 (67-109)||(8149084-8149126)
chr7 (64-106)||(12473256-12473298)
chr7 (162-196)||(21566530-21566564)
chr7 (161-203)||(36602540-36602582)
chr7 (165-202)||(11741890-11741927)
chr7 (112-154)||(12473334-12473378)
chr7 (69-106)||(29140501-29140538)
chr7 (108-165)||(29907445-29907505)
chr7 (162-203)||(32233135-32233176)
chr7 (72-109)||(40463837-40463874)
chr7 (73-109)||(10693209-10693245)
chr7 (81-109)||(11617726-11617754)
chr7 (81-109)||(19427027-19427055)
chr7 (66-106)||(21447544-21447584)
chr7 (69-109)||(25198679-25198719)
chr7 (65-109)||(28078269-28078313)
chr7 (133-165)||(36267868-36267900)
chr7 (167-203)||(42805625-42805661)
[»] chr6 (36 HSPs)
chr6 (108-203)||(1354757-1354864)
chr6 (108-203)||(1346990-1347097)
chr6 (108-203)||(25557751-25557858)
chr6 (108-203)||(26097186-26097293)
chr6 (110-165)||(28007656-28007711)
chr6 (108-165)||(23240874-23240931)
chr6 (112-165)||(1941885-1941940)
chr6 (66-109)||(1346918-1346961)
chr6 (66-109)||(1354893-1354936)
chr6 (108-165)||(12221965-12222026)
chr6 (108-165)||(29355905-29355966)
chr6 (68-109)||(3815215-3815256)
chr6 (64-109)||(8409195-8409240)
chr6 (122-166)||(33138875-33138919)
chr6 (64-109)||(9161075-9161120)
chr6 (108-165)||(9161149-9161209)
chr6 (64-109)||(14975218-14975263)
chr6 (160-204)||(10734904-10734948)
chr6 (108-165)||(18277243-18277302)
chr6 (66-109)||(1941809-1941852)
chr6 (160-203)||(12892101-12892144)
chr6 (112-160)||(13905034-13905084)
chr6 (70-109)||(24734591-24734630)
chr6 (168-203)||(25997749-25997784)
chr6 (66-109)||(33922966-33923009)
chr6 (136-166)||(3815126-3815156)
chr6 (66-108)||(6024187-6024229)
chr6 (66-108)||(15866176-15866218)
chr6 (112-154)||(7947433-7947477)
chr6 (76-109)||(12222055-12222088)
chr6 (122-151)||(14341134-14341163)
chr6 (108-153)||(6024259-6024306)
chr6 (111-148)||(8409272-8409311)
chr6 (122-165)||(15865907-15865948)
chr6 (122-165)||(15866089-15866130)
chr6 (129-165)||(32579474-32579510)
[»] chr5 (63 HSPs)
chr5 (108-203)||(32703450-32703557)
chr5 (108-203)||(35710339-35710446)
chr5 (108-165)||(7368424-7368481)
chr5 (108-165)||(8170034-8170091)
chr5 (108-165)||(41014345-41014403)
chr5 (108-162)||(2838805-2838860)
chr5 (108-164)||(16880698-16880756)
chr5 (108-165)||(7097810-7097868)
chr5 (112-165)||(19142993-19143047)
chr5 (121-204)||(34154813-34154908)
chr5 (64-109)||(41014271-41014316)
chr5 (108-165)||(24448916-24448975)
chr5 (65-109)||(38879534-38879578)
chr5 (66-109)||(1565385-1565428)
chr5 (160-203)||(16028624-16028667)
chr5 (66-109)||(24448844-24448887)
chr5 (122-165)||(43574648-43574691)
chr5 (109-165)||(13801817-13801877)
chr5 (108-165)||(22907915-22907973)
chr5 (110-165)||(4619154-4619213)
chr5 (108-165)||(29334421-29334481)
chr5 (108-145)||(37024626-37024663)
chr5 (69-109)||(4619244-4619284)
chr5 (160-204)||(30877563-30877607)
chr5 (66-106)||(35710267-35710307)
chr5 (65-109)||(37024692-37024736)
chr5 (69-109)||(43334159-43334199)
chr5 (66-109)||(8170120-8170163)
chr5 (66-109)||(19438703-19438746)
chr5 (108-165)||(20135630-20135691)
chr5 (108-165)||(27328778-27328839)
chr5 (108-165)||(38879607-38879668)
chr5 (122-165)||(41425990-41426033)
chr5 (67-109)||(2838733-2838775)
chr5 (160-202)||(19438758-19438800)
chr5 (122-165)||(43334245-43334290)
chr5 (125-162)||(22600499-22600536)
chr5 (160-200)||(7368488-7368528)
chr5 (165-201)||(11462922-11462958)
chr5 (65-109)||(22600407-22600451)
chr5 (65-109)||(23974734-23974777)
chr5 (69-109)||(27328709-27328749)
chr5 (64-104)||(41956884-41956924)
chr5 (112-165)||(208977-209032)
chr5 (122-165)||(3771381-3771424)
chr5 (160-203)||(10943845-10943887)
chr5 (160-203)||(16957406-16957449)
chr5 (160-203)||(38879675-38879718)
chr5 (162-192)||(22861680-22861710)
chr5 (71-109)||(31299591-31299629)
chr5 (137-166)||(1405244-1405273)
chr5 (162-203)||(1405281-1405322)
chr5 (112-164)||(1850670-1850723)
chr5 (160-201)||(13774957-13774998)
chr5 (124-165)||(30006369-30006410)
chr5 (160-204)||(1565524-1565567)
chr5 (108-163)||(5873374-5873430)
chr5 (122-162)||(9794431-9794471)
chr5 (160-204)||(12575659-12575703)
chr5 (65-109)||(22187238-22187282)
chr5 (69-109)||(22861804-22861844)
chr5 (167-203)||(41014417-41014453)
chr5 (122-154)||(42924895-42924927)
[»] chr1 (89 HSPs)
chr1 (108-203)||(38478282-38478389)
chr1 (108-203)||(34725098-34725205)
chr1 (108-203)||(35253187-35253294)
chr1 (110-203)||(19414490-19414595)
chr1 (108-165)||(32632607-32632665)
chr1 (108-165)||(12126887-12126944)
chr1 (108-163)||(23768372-23768429)
chr1 (108-165)||(31382264-31382322)
chr1 (108-199)||(45812541-45812644)
chr1 (122-200)||(10378738-10378828)
chr1 (108-165)||(47214560-47214617)
chr1 (108-165)||(46248003-46248062)
chr1 (122-165)||(4349703-4349746)
chr1 (112-165)||(11596566-11596620)
chr1 (112-203)||(24564397-24564492)
chr1 (65-109)||(34725234-34725278)
chr1 (108-165)||(41319856-41319915)
chr1 (66-109)||(18944620-18944663)
chr1 (108-165)||(18944692-18944753)
chr1 (66-109)||(22930205-22930248)
chr1 (108-165)||(30395776-30395837)
chr1 (65-108)||(34714599-34714642)
chr1 (66-108)||(10668197-10668239)
chr1 (64-109)||(14617013-14617058)
chr1 (108-203)||(14617087-14617196)
chr1 (108-154)||(17470407-17470455)
chr1 (64-109)||(19932890-19932935)
chr1 (68-109)||(40424721-40424762)
chr1 (125-165)||(15505632-15505672)
chr1 (108-165)||(18724595-18724654)
chr1 (65-109)||(41319944-41319988)
chr1 (112-165)||(46991857-46991912)
chr1 (122-161)||(4430080-4430119)
chr1 (122-165)||(6983861-6983904)
chr1 (66-109)||(20004230-20004273)
chr1 (122-165)||(21910699-21910742)
chr1 (108-154)||(22324942-22324989)
chr1 (112-164)||(25468314-25468368)
chr1 (108-165)||(27201696-27201757)
chr1 (66-109)||(32632694-32632737)
chr1 (108-165)||(33223033-33223092)
chr1 (108-165)||(35005172-35005233)
chr1 (66-109)||(45812673-45812716)
chr1 (66-109)||(46248091-46248134)
chr1 (66-109)||(46991781-46991824)
chr1 (66-109)||(47214488-47214531)
chr1 (160-203)||(50606518-50606561)
chr1 (108-203)||(50760240-50760335)
chr1 (110-165)||(6925151-6925208)
chr1 (122-165)||(18742007-18742052)
chr1 (71-109)||(18742099-18742137)
chr1 (122-165)||(19932803-19932848)
chr1 (161-203)||(23796581-23796623)
chr1 (123-165)||(43768205-43768247)
chr1 (72-109)||(30395866-30395903)
chr1 (115-165)||(44485159-44485211)
chr1 (71-108)||(45402077-45402114)
chr1 (160-204)||(4349753-4349797)
chr1 (65-109)||(8197019-8197063)
chr1 (69-109)||(23768458-23768498)
chr1 (69-109)||(25290143-25290183)
chr1 (65-109)||(27474257-27474301)
chr1 (122-165)||(31442439-31442483)
chr1 (122-165)||(1517361-1517404)
chr1 (108-165)||(10668274-10668335)
chr1 (108-165)||(20004140-20004201)
chr1 (108-158)||(21723733-21723784)
chr1 (110-154)||(35117829-35117875)
chr1 (66-109)||(38478418-38478461)
chr1 (161-203)||(20004090-20004132)
chr1 (67-109)||(21723642-21723684)
chr1 (108-165)||(22930119-22930176)
chr1 (108-159)||(23796514-23796567)
chr1 (108-165)||(27474330-27474388)
chr1 (108-146)||(44745854-44745892)
chr1 (108-165)||(45402143-45402204)
chr1 (122-163)||(46859131-46859173)
chr1 (161-191)||(47214625-47214655)
chr1 (117-165)||(2435836-2435885)
chr1 (111-165)||(8197095-8197151)
chr1 (66-107)||(10163736-10163777)
chr1 (162-203)||(20999850-20999891)
chr1 (112-165)||(27136701-27136757)
chr1 (163-203)||(10668345-10668385)
chr1 (163-203)||(16120834-16120874)
chr1 (161-201)||(22325009-22325049)
chr1 (65-109)||(27201623-27201667)
chr1 (108-165)||(34149010-34149069)
chr1 (122-154)||(50812005-50812037)
[»] chr2 (73 HSPs)
chr2 (107-203)||(21779261-21779369)
chr2 (108-165)||(9671207-9671264)
chr2 (108-204)||(23397792-23397900)
chr2 (108-165)||(12023969-12024027)
chr2 (108-165)||(36871519-36871577)
chr2 (108-165)||(8455366-8455425)
chr2 (122-165)||(10546205-10546248)
chr2 (122-165)||(22371096-22371139)
chr2 (108-162)||(25249791-25249846)
chr2 (108-165)||(14444755-14444813)
chr2 (108-166)||(11514462-11514522)
chr2 (108-160)||(27573647-27573700)
chr2 (108-166)||(40762283-40762343)
chr2 (65-109)||(14530271-14530315)
chr2 (112-165)||(17623594-17623649)
chr2 (112-165)||(17668032-17668087)
chr2 (65-109)||(25079856-25079900)
chr2 (112-165)||(32781338-32781393)
chr2 (65-109)||(39189559-39189603)
chr2 (66-109)||(8455454-8455497)
chr2 (66-109)||(12024056-12024099)
chr2 (108-166)||(30826063-30826122)
chr2 (108-165)||(99315-99372)
chr2 (68-109)||(11514392-11514433)
chr2 (68-109)||(17896215-17896256)
chr2 (64-109)||(22371009-22371054)
chr2 (108-166)||(23145747-23145807)
chr2 (64-109)||(23397718-23397763)
chr2 (108-166)||(23557537-23557597)
chr2 (108-154)||(24200686-24200734)
chr2 (108-165)||(4516401-4516460)
chr2 (111-165)||(10543727-10543785)
chr2 (112-165)||(21377123-21377178)
chr2 (65-109)||(21779397-21779441)
chr2 (122-162)||(25632551-25632591)
chr2 (122-165)||(5450328-5450371)
chr2 (66-109)||(9671134-9671177)
chr2 (66-109)||(17705449-17705492)
chr2 (122-165)||(17896302-17896345)
chr2 (67-109)||(10543653-10543695)
chr2 (67-109)||(14544018-14544060)
chr2 (67-109)||(24200763-24200805)
chr2 (64-109)||(25249875-25249920)
chr2 (72-109)||(27573581-27573618)
chr2 (160-204)||(14530412-14530456)
chr2 (160-204)||(40416870-40416914)
chr2 (66-109)||(7214488-7214531)
chr2 (160-203)||(9671271-9671314)
chr2 (160-203)||(10543792-10543835)
chr2 (160-203)||(10546255-10546298)
chr2 (108-165)||(14530344-14530405)
chr2 (160-203)||(22371204-22371247)
chr2 (122-165)||(24890453-24890496)
chr2 (122-165)||(25079767-25079810)
chr2 (122-165)||(25641543-25641586)
chr2 (66-109)||(27466268-27466311)
chr2 (108-158)||(30864474-30864525)
chr2 (160-203)||(34080193-34080236)
chr2 (160-199)||(39189508-39189547)
chr2 (122-165)||(39914355-39914398)
chr2 (122-165)||(44643565-44643608)
chr2 (66-108)||(26684761-26684803)
chr2 (161-203)||(44643616-44643658)
chr2 (122-159)||(2003592-2003629)
chr2 (108-150)||(7214560-7214604)
chr2 (108-154)||(15296468-15296516)
chr2 (108-162)||(19977767-19977823)
chr2 (68-109)||(19977852-19977893)
chr2 (160-201)||(41409954-41409995)
chr2 (129-165)||(13245145-13245181)
chr2 (122-162)||(39499283-39499323)
chr2 (122-166)||(40416920-40416964)
chr2 (122-154)||(44449445-44449477)
[»] scaffold0168 (2 HSPs)
scaffold0168 (108-203)||(30605-30712)
scaffold0168 (66-109)||(30533-30576)
[»] chr4 (86 HSPs)
chr4 (112-203)||(20225014-20225117)
chr4 (108-203)||(48598825-48598932)
chr4 (108-165)||(9832363-9832420)
chr4 (111-201)||(29207900-29208002)
chr4 (108-165)||(47528580-47528637)
chr4 (108-165)||(5648285-5648343)
chr4 (108-203)||(11054148-11054255)
chr4 (108-199)||(39077800-39077903)
chr4 (108-164)||(6430677-6430734)
chr4 (108-165)||(17043444-17043503)
chr4 (108-165)||(5306714-5306772)
chr4 (108-165)||(49796824-49796882)
chr4 (108-203)||(54175090-54175200)
chr4 (108-165)||(8473672-8473729)
chr4 (108-165)||(47443983-47444042)
chr4 (108-203)||(30639406-30639514)
chr4 (108-162)||(40915855-40915910)
chr4 (108-165)||(7909331-7909389)
chr4 (63-109)||(48598961-48599007)
chr4 (108-165)||(20639708-20639768)
chr4 (65-109)||(5648212-5648256)
chr4 (65-109)||(6430763-6430807)
chr4 (65-109)||(20224937-20224981)
chr4 (108-161)||(51865092-51865147)
chr4 (108-159)||(10277813-10277864)
chr4 (66-109)||(10660358-10660401)
chr4 (66-109)||(10874503-10874546)
chr4 (122-165)||(19027890-19027933)
chr4 (66-109)||(20405047-20405090)
chr4 (66-109)||(23501747-23501790)
chr4 (160-203)||(38786701-38786744)
chr4 (66-109)||(55766604-55766647)
chr4 (66-108)||(55830860-55830902)
chr4 (64-109)||(5306801-5306846)
chr4 (112-165)||(9987884-9987939)
chr4 (65-109)||(14590790-14590834)
chr4 (69-109)||(16911519-16911559)
chr4 (69-109)||(18969698-18969738)
chr4 (108-203)||(23501813-23501924)
chr4 (108-165)||(25629075-25629134)
chr4 (65-109)||(30639333-30639377)
chr4 (108-165)||(35567196-35567255)
chr4 (66-109)||(11054284-11054327)
chr4 (66-109)||(13256535-13256578)
chr4 (108-165)||(16911588-16911649)
chr4 (66-109)||(21646918-21646961)
chr4 (164-199)||(28494247-28494282)
chr4 (108-163)||(30496374-30496429)
chr4 (122-165)||(30690226-30690269)
chr4 (160-203)||(32484325-32484368)
chr4 (66-109)||(47528666-47528709)
chr4 (110-153)||(13256463-13256508)
chr4 (122-164)||(14590880-14590922)
chr4 (112-165)||(41018844-41018898)
chr4 (121-166)||(17079700-17079745)
chr4 (64-108)||(5313133-5313177)
chr4 (160-204)||(11394944-11394988)
chr4 (160-204)||(11404671-11404715)
chr4 (108-165)||(14983860-14983919)
chr4 (108-153)||(16408665-16408712)
chr4 (73-109)||(16408741-16408777)
chr4 (69-109)||(17315436-17315476)
chr4 (160-204)||(20225168-20225212)
chr4 (122-154)||(25343229-25343261)
chr4 (112-165)||(37494881-37494936)
chr4 (160-204)||(38755907-38755951)
chr4 (108-164)||(39029111-39029170)
chr4 (160-204)||(40553936-40553980)
chr4 (160-204)||(44363129-44363173)
chr4 (108-165)||(47441580-47441639)
chr4 (163-202)||(8473621-8473660)
chr4 (122-165)||(12711499-12711542)
chr4 (160-203)||(16408601-16408644)
chr4 (125-165)||(20225119-20225161)
chr4 (108-165)||(21646990-21647051)
chr4 (160-203)||(35532084-35532127)
chr4 (71-109)||(30352729-30352767)
chr4 (123-165)||(55766516-55766558)
chr4 (108-166)||(7385525-7385585)
chr4 (170-203)||(19028013-19028046)
chr4 (129-165)||(20908686-20908723)
chr4 (64-109)||(29879635-29879680)
chr4 (121-166)||(16494258-16494305)
chr4 (112-165)||(25463152-25463207)
chr4 (122-165)||(30581515-30581559)
chr4 (112-165)||(54967051-54967105)
[»] scaffold0057 (6 HSPs)
scaffold0057 (108-165)||(43685-43742)
scaffold0057 (108-165)||(24822-24881)
scaffold0057 (64-109)||(24905-24950)
scaffold0057 (112-165)||(46861-46916)
scaffold0057 (160-203)||(43750-43793)
scaffold0057 (160-203)||(46923-46966)
[»] scaffold0223 (1 HSPs)
scaffold0223 (108-204)||(11157-11265)
[»] scaffold0187 (6 HSPs)
scaffold0187 (108-165)||(10100-10157)
scaffold0187 (108-165)||(20428-20485)
scaffold0187 (69-109)||(10186-10226)
scaffold0187 (69-109)||(20514-20554)
scaffold0187 (65-109)||(8898-8942)
scaffold0187 (65-109)||(19226-19270)
[»] scaffold0036 (1 HSPs)
scaffold0036 (122-166)||(35066-35110)
[»] scaffold1176 (1 HSPs)
scaffold1176 (112-165)||(1637-1690)
[»] scaffold0258 (3 HSPs)
scaffold0258 (108-165)||(13074-13132)
scaffold0258 (68-109)||(13161-13202)
scaffold0258 (67-111)||(17505-17549)
[»] scaffold0180 (1 HSPs)
scaffold0180 (128-203)||(24133-24220)
[»] scaffold0024 (1 HSPs)
scaffold0024 (64-109)||(83827-83872)
[»] scaffold0311 (1 HSPs)
scaffold0311 (112-165)||(10840-10895)
[»] scaffold0005 (2 HSPs)
scaffold0005 (65-109)||(226544-226588)
scaffold0005 (122-164)||(226456-226498)
[»] scaffold0867 (1 HSPs)
scaffold0867 (115-166)||(3718-3770)
[»] scaffold0049 (1 HSPs)
scaffold0049 (108-165)||(59003-59064)
[»] scaffold0018 (2 HSPs)
scaffold0018 (74-107)||(73001-73034)
scaffold0018 (122-158)||(72924-72960)
[»] scaffold0167 (1 HSPs)
scaffold0167 (112-165)||(23629-23684)


Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 77)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 269
Target Start/End: Complemental strand, 23286522 - 23286271
Alignment:
Q  18 tcatatacttttgtgagattaaattgaatagttgtacatgttcttgatgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgacagcctctt 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23286522 tcatatacttttgtgagattaaattgaatagttgtacatgtttttgatgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgacagcctctt 23286423  T
Q  118 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgccctttagttgtacatgttt 217  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23286422 gtgtaaaacagggtaaagctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgccctttagttgtacatgttt 23286323  T
Q  218 ttgatgattaatcatgctttgcatctttcagattacattagtggtgatgtcc 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23286322 ttgatgattaatcatgctttgcatctttcagattacattagtgttgatgtcc 23286271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 12670357 - 12670250
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  12670357 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 12670258  T
Q  196 tgcccttt 203  Q
    | ||||||    
T  12670257 tacccttt 12670250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 30454204 - 30454097
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  30454204 acagcctcttgtgtaaaacaaggtaaggctgcgtacgatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 30454105  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  30454104 tgcccttt 30454097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 13160728 - 13160786
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13160728 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 13160786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 45071291 - 45071349
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45071291 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 45071349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 36720822 - 36720881
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  36720822 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 36720881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 19729368 - 19729425
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  19729368 acagtctcttatgtaaaacagggtaaggctgtgtacaatacaccaaatggtgggaccc 19729425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 28817735 - 28817676
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  28817735 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacccaatggtgggaccc 28817676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 29877120 - 29877179
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  29877120 acagccttttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 29877179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 44530179 - 44530234
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44530179 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 44530234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 5689659 - 5689716
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  5689659 agcctcttgtgtaaaaagcagggtaaggctgcgtacaatacaccaaatggtggaaccc 5689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 24365169 - 24365109
Alignment:
Q  108 acagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||    
T  24365169 acagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaatggtgggaccc 24365109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 20869605 - 20869560
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaa 153  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  20869605 acagcctcttgtgtaaaacagggtaaggctgtgtacaatacaccaa 20869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 29521794 - 29521738
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  29521794 acagcctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 29521738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 5135398 - 5135339
Alignment:
Q  108 acagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  5135398 acagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaatggtgggaccc 5135339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 30454277 - 30454233
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  30454277 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 30454233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 35261705 - 35261764
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| |||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  35261705 acagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccc 35261764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 7136710 - 7136667
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 7136667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 12670429 - 12670386
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 12670386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 35261633 - 35261676
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 35261676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 23000327 - 23000227
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc---tgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||||| || ||||||| | | |||||||||||||||||||||||||     |  ||||||||||| |||||||||||| ||||||||    
T  23000327 acagcctcttgtgtaaaaacacggtaaggttccatacaatacaccaaatggtgggaccccttcccggatgcgggagctttagtgcaccgggttgcccttt 23000228  T
Q  204 a 204  Q
    |    
T  23000227 a 23000227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 2626471 - 2626516
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  2626471 atgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgac 2626516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 26954158 - 26954220
Alignment:
Q  108 acagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||||    
T  26954158 acagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 26954220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 39461179 - 39461138
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatg 105  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  39461179 atgaggggtaaccttggcgcaactggtaaagttgttgtcatg 39461138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 8484043 - 8483988
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||    
T  8484043 cctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaattggtgggaccc 8483988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 13160655 - 13160699
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgac 13160699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 17823529 - 17823573
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  17823529 tgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgac 17823573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 24245400 - 24245448
Alignment:
Q  61 ttgatgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  24245400 ttgaagaggggtaaccttggggcaactggtaaagttgttgtcatgtgac 24245448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 28817808 - 28817764
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  28817808 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 28817764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 36720749 - 36720793
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| || ||||||||||||||||||||||||||    
T  36720749 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgac 36720793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 44742612 - 44742568
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  44742612 aaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccc 44742568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 2626564 - 2626607
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  2626564 aaaacagggtaagactgcgtacaatacaccaaatgatgggaccc 2626607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 6760848 - 6760909
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||  |||||||||||||    
T  6760848 acagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccc 6760909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 7136634 - 7136577
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  7136634 cctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccc 7136577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 8897857 - 8897814
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  8897857 aaaatagggtaaggctacgtacaatacaccaaatggtgggaccc 8897814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 12625932 - 12625975
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  12625932 aaaacagggtaagactgcatacaatacaccaaatggtgggaccc 12625975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 18164868 - 18164821
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaa 154  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  18164868 acagcctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaa 18164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 20869677 - 20869634
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgac 20869634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 20869949 - 20870010
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  20869949 acagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 20870010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 26102609 - 26102652
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  26102609 ggaccctgcttatgcgggagctctagtgcaccgggttgcccttt 26102652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 40605087 - 40605044
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  40605087 tgaggggtaactttggcgcaactggtaaagttgttgtcatgtga 40605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 43942350 - 43942411
Alignment:
Q  108 acagcctcttgtgt--aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||  ||||||||||||||    
T  43942350 acagcctcttatgtcaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 43942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 44530103 - 44530146
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgac 44530146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 10857871 - 10857913
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  10857871 aaaacagggtaaggctgcgcacaatacaccaattggtgggacc 10857913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 26457776 - 26457814
Alignment:
Q  127 agggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  26457776 agggtaaggctgcgtacaatacaccaattggtgggaccc 26457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 25250474 - 25250519
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||    
T  25250474 atgagaggtaaccttggcacaactggtaaagttgttgtcatgtgac 25250519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 389687 - 389727
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  389687 aaaacagggtaaggttgcgtacaatacaccaaatgatggga 389727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 17823602 - 17823661
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  |||| |||| ||||||| ||||||||||||||||| ||||    
T  17823602 acagcctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaaatggtggaaccc 17823661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 39461105 - 39461058
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 153  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  39461105 acagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaa 39461058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 6760773 - 6760819
Alignment:
Q  62 tgatgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6760773 tgatgaggggtaac-ttggcgcaactggtaaagttgttgtcatatgac 6760819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 11001042 - 11000999
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| | |||||||| ||||||||||||||||||||||||||    
T  11001042 aaaacaagataaggctgtgtacaatacaccaaatggtgggaccc 11000999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 12625982 - 12626025
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  12625982 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 12626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 17250985 - 17250924
Alignment:
Q  109 cagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccct 166  Q
    |||||||||||||||||  |||| |||||| |||||||||||||||  ||||||||||||||    
T  17250985 cagcctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccct 17250924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 20284250 - 20284211
Alignment:
Q  70 ggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgac 20284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 21070879 - 21070840
Alignment:
Q  70 ggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgac 21070840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 27468135 - 27468092
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  27468135 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 27468092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 29521866 - 29521823
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgac 29521823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 35261771 - 35261814
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  35261771 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 35261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 39461037 - 39460994
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  39461037 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 39460994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 17823670 - 17823712
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||||||| |||||| |||||||||||| |||||||||    
T  17823670 accctgcatatgcaggagctttagtgcaccgggttgcccttta 17823712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 20284164 - 20284119
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||    
T  20284164 aaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccc 20284119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 21070792 - 21070747
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||    
T  21070792 aaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccc 21070747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 28407379 - 28407413
Alignment:
Q  75 ccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||| |||||||||||||||||||||||||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgac 28407413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 45071219 - 45071261
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||||||| ||  ||||||||||||||||||||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtga 45071261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 112
Target Start/End: Complemental strand, 8897928 - 8897899
Alignment:
Q  83 caactggtaaagttgttgtcatgtgacagc 112  Q
    ||||||||||||||||||||||||||||||    
T  8897928 caactggtaaagttgttgtcatgtgacagc 8897899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 22598187 - 22598243
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||  ||||||||||||  |||||||||||||| ||||| ||||||    
T  22598187 cctcttgtgtaaaaaacagggtaaggctatgtacaatacaccaattggtgagaccct 22598243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 27037650 - 27037683
Alignment:
Q  170 tatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||| |||||||||||||||||||||||    
T  27037650 tatgcgggagttctagtgcaccgggctgcccttt 27037683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 31457266 - 31457307
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||| ||||||||||||||||||||||||  ||||||||    
T  31457266 accctgcgtatgcgggagctctagtgcaccggattgcccttt 31457307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 36918166 - 36918199
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaat 155  Q
    ||||||||||||||||| ||||||||||||||||    
T  36918166 aaaacagggtaaggctgtgtacaatacaccaaat 36918199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 42840863 - 42840900
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtca 103  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  42840863 gaggggtaaccttggcgcaactagtaaagttgttgtca 42840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 44781611 - 44781567
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||    
T  44781611 cctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaa 44781567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 6760923 - 6760959
Alignment:
Q  167 gcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  6760923 gcatatgcgggagctttagtgcaccgggttgcccttt 6760959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 16225045 - 16225092
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 153  Q
    |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  16225045 acagcctcttatgtaaaaaacagggtaagactgcgtacaatacaccaa 16225092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 16225113 - 16225157
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||||| ||||||||||||||| |||||||||||| || ||||||    
T  16225113 ggaccccgcatatgcgggagctttagtgcaccgggttgtccttta 16225157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 18164941 - 18164897
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| |||| |||||| ||| ||||||||||||||||||    
T  18164941 tgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgac 18164897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 20870024 - 20870060
Alignment:
Q  167 gcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  20870024 gcatatgcgggagctttagtgcaccgggttgcccttt 20870060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 35105953 - 35106008
Alignment:
Q  112 cctcttgtgtaaaacagggt--aaggctgcgtacaatacacca-aatggtgggacc 164  Q
    |||||||||||||| || ||  ||||||||||||||||||||| ||||||||||||    
T  35105953 cctcttgtgtaaaagagagtgtaaggctgcgtacaatacaccagaatggtgggacc 35106008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 4495757 - 4495676
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  4495757 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4495676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 31831247 - 31831344
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggt-gggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||    
T  31831247 acagcctcttgtgtaaaatagggtaaggctgcatacaatacaccaaatggtccggaccctgcatatgcgggtgctctagtgcaccgggttgcccttta 31831344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 31592897 - 31593004
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  31592897 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcgggagctctagtgcaccgggt 31592996  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  31592997 tgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 54032664 - 54032571
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  54032664 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccgaatggtgggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 54032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 1217138 - 1217245
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |            |||||||||||||||||||||||||||||||||||     
T  1217138 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 1217237  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  1217238 tgcccttt 1217245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 15797271 - 15797377
Alignment:
Q  109 cagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggct 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||| |||||||||||||||||||| |    
T  15797271 cagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggtt 15797370  T
Q  197 gcccttt 203  Q
    |||||||    
T  15797371 gcccttt 15797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 34771461 - 34771364
Alignment:
Q  118 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||    
T  34771461 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 34771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 39203564 - 39203672
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc------------tgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||            |||||||||||||||| ||||||||||||     
T  39203564 acagcctcttgtgtaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggt 39203663  T
Q  196 tgcccttta 204  Q
    |||||||||    
T  39203664 tgcccttta 39203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 22123024 - 22122967
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22123024 acagtctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 22122967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 43956543 - 43956472
Alignment:
Q  132 aaggctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||| || |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  43956543 aaggctacgcacaatacaccaaatggtgggacccagcgtatgcgggagctttagtgcaccgggctgcccttt 43956472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 22609814 - 22609872
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22609814 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 22609872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 47624090 - 47624148
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47624090 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 47624148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 7696994 - 7696901
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgg-------tgggaccctgcatatgcgggagctctagtgcaccggg 194  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||| ||||||||||||||||||||    
T  7696994 acagtctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggccccttcccggacactgcatatgtgggagctctagtgcaccggg 7696901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 6411930 - 6411872
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  6411930 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccc 6411872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 16735489 - 16735547
Alignment:
Q  108 acagcctcttgt-gtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  16735489 acagcctcttgtagaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 16735547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 26869755 - 26869813
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26869755 acagcctctggtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 26869813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 40272917 - 40272862
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  40272917 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 40272862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 9276313 - 9276366
Alignment:
Q  109 cagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgg 160  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  9276313 cagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgg 9276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 54484738 - 54484798
Alignment:
Q  108 acagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||    
T  54484738 acagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccc 54484798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 8247872 - 8247827
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  8247872 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 8247827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 7697067 - 7697023
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  7697067 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 7697023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 12914144 - 12914085
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||||| |||||    
T  12914144 acagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaatggtgagaccc 12914085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 16735416 - 16735460
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  16735416 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 16735460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 26573175 - 26573234
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  26573175 acagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgggaccc 26573234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 40272994 - 40272950
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 40272950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 10795534 - 10795473
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||    
T  10795534 acagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 10795473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 10870132 - 10870089
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 10870089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 13628901 - 13628840
Alignment:
Q  108 acagcctcttgtgtaa--aacagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||    
T  13628901 acagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 13628840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 13730785 - 13730742
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 13730742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 14987005 - 14987066
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  14987005 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 14987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 30452909 - 30452952
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  30452909 ggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 30452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 45620938 - 45620881
Alignment:
Q  108 acagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||    
T  45620938 acagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaattggtggga 45620881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 45786325 - 45786264
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||    
T  45786325 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 45786264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 46421146 - 46421085
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  46421146 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 46421085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 46421218 - 46421175
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 46421175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 49013584 - 49013523
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  49013584 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 49013523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 52428585 - 52428527
Alignment:
Q  109 cagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||    
T  52428585 cagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatagtggaaccc 52428527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 52926391 - 52926348
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 52926348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 33926133 - 33926190
Alignment:
Q  110 agcctcttgtgtaaaa-cagggtaaggctgcgtacaatacacca-aatggtgggaccc 165  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  33926133 agcctcttgtgtaaaaacagggtaaggctgtgtacaatacaccataatggtgggaccc 33926190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 34420753 - 34420693
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||    
T  34420753 acagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaatggtgggaccc 34420693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 6412002 - 6411962
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 6411962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 9607178 - 9607222
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  9607178 tgaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgac 9607222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 12914221 - 12914173
Alignment:
Q  61 ttgatgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  12914221 ttgaagaggggtaaccttggcgcaactggtaaagttgttgtaatgtgac 12914173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 21874999 - 21875039
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgac 21875039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 26292382 - 26292487
Alignment:
Q  110 agcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggga------------ccctgcatatgcgggagctctagtgcaccgggctg 197  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||| |||||            |||||||||||||||| ||||||||||||||| ||    
T  26292382 agcctcttgtgtaaaacagggtaagaccgcgtacgatacaccaaatgatgggatcccttcccgaaccctgcatatgcgggaactctagtgcaccgggttg 26292481  T
Q  198 cccttt 203  Q
     |||||    
T  26292482 tccttt 26292487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 4495845 - 4495802
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgac 4495802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 6242328 - 6242285
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  6242328 ggaccctgcatatgcaggagctctagtgcaccgggttgcccttt 6242285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 13730713 - 13730652
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||  |||||||||||||    
T  13730713 acagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccc 13730652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 29366831 - 29366770
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||  |||||||||||||    
T  29366831 acagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 29366770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 31904950 - 31904907
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||| | ||||||||||||||||||||||||||||||    
T  31904950 aaaacagggtatgactgcgtacaatacaccaaatggtgggaccc 31904907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 353444 - 353399
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||||||||||||||||||||||  |||||||||||||    
T  353444 aaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 353399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 1217064 - 1217106
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  1217064 atgaggggtaaccttggcgcaactggtaaagttgtagtcatgt 1217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 22122960 - 22122918
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgccctt 202  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  22122960 ggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 25517353 - 25517311
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgac 25517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 29366902 - 29366860
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgac 29366860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 8247798 - 8247739
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggac 163  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||  |||||||||||    
T  8247798 acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggac 8247739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 9276248 - 9276289
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatg 105  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  9276248 atgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 52926304 - 52926271
Alignment:
Q  130 gtaaggctgcgtacaatacaccaaatggtgggac 163  Q
    ||||||||||||||||||||||||||||||||||    
T  52926304 gtaaggctgcgtacaatacaccaaatggtgggac 52926271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 53996671 - 53996615
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    ||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  53996671 cctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaaaatggtgggaccc 53996615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 7943054 - 7943094
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  7943054 aaaacagggtaagactgcgtacaatacatcaaatggtggga 7943094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 22609742 - 22609785
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  22609742 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgac 22609785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 33235581 - 33235639
Alignment:
Q  110 agcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||   ||||||||| ||| ||||||||||| ||||||||||||||    
T  33235581 agcctcttgtgtaaaaaaacagggtaagactgtgtacaatacactaaatggtgggaccc 33235639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 39203491 - 39203535
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgac 39203535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 43114979 - 43114917
Alignment:
Q  108 acagcctcttgtgtaaaa---cagggtaagg-ctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||||   |||||||||| || | ||||||||||||||||||||||||||    
T  43114979 acagcctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaaatggtgggaccct 43114917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 45948943 - 45948888
Alignment:
Q  112 cctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| |  |||||||||||| ||||||||||||| |||||||||||    
T  45948943 cctcttgtgtaaaaaatagggtaaggctgcatacaatacaccaattggtgggaccc 45948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 10484659 - 10484616
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  10484659 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10484616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 19731052 - 19731110
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||  || ||||||| ||||||||||||||| | ||||||||||||    
T  19731052 agcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacctattggtgggaccct 19731110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 19751628 - 19751686
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||  || ||||||| ||||||||||||||| | ||||||||||||    
T  19751628 agcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacctattggtgggaccct 19751686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 24851340 - 24851301
Alignment:
Q  164 cctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  24851340 cctgcatatgcgggagctttagtgcaccgggttgcccttt 24851301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 45139583 - 45139526
Alignment:
Q  112 cctcttgtgtaaaaca--gggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||  |||||||||||| |||||||||||  ||||||||||||||    
T  45139583 cctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggaccc 45139526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 47624213 - 47624256
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  47624213 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 47624256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 54484805 - 54484848
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  54484805 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 54484848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 516527 - 516569
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  516527 gaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 516569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 8410960 - 8410918
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    ||||||||||||||||||  |||||||||||| ||||||||||    
T  8410960 aaaacagggtaaggctgctcacaatacaccaactggtgggacc 8410918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 13628976 - 13628930
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggt-aaagttgttgtcatgtgac 109  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||    
T  13628976 atgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgac 13628930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 24577950 - 24577992
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||| ||||||||||||||||||||  ||||||||    
T  24577950 gaccctgcatatacgggagctctagtgcaccggattgcccttt 24577992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 24578040 - 24578082
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  24578040 gaccctacatatgcgggaactctagtgcaccgggttgcccttt 24578082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 353392 - 353351
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgccct 201  Q
    |||||| ||||||||||||||| |||||||||||| ||||||    
T  353392 ggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 516457 - 516505
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||||||||||  ||||||||||||||| |||||| ||||||    
T  516457 acagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaa 516505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 5173903 - 5173858
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggt-aaagttgttgtcatgtgac 109  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||    
T  5173903 tgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgac 5173858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 12525385 - 12525418
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgt 98  Q
    ||||||||||||||| ||||||||||||||||||    
T  12525385 tgaggggtaaccttggcgcaactggtaaagttgt 12525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 23871418 - 23871455
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgt 23871455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 40390357 - 40390398
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||| |||||||||||| |||||||||||| ||||||||    
T  40390357 accctgcgtatgcgggagctttagtgcaccgggttgcccttt 40390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 54374451 - 54374395
Alignment:
Q  112 cctcttgtgtaaaaca--gggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||| |  ||||||||||||||||||| |||| ||||||||||||||    
T  54374451 cctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccc 54374395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 55401224 - 55401284
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    ||||||||||||||||||  |||| |||| ||||||| |||||||| ||||||||||||||    
T  55401224 acagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtgggaccc 55401284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 9607251 - 9607298
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 153  Q
    ||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  9607251 acagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaa 9607298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 13730638 - 13730602
Alignment:
Q  167 gcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  13730638 gcatatgcgggagctttagtgcaccgggttgcccttt 13730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 26869698 - 26869726
Alignment:
Q  81 cgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||||||||||||||||    
T  26869698 cgcaactggtaaagttgttgtcatgtgac 26869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 48741 - 48634
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  48741 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 48642  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  48641 tgcccttt 48634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 21172116 - 21172009
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  21172116 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 21172017  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  21172016 tgcccttt 21172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 32758287 - 32758394
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  32758287 acagcctcttgtgtaaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 32758386  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  32758387 tgcccttt 32758394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 42391207 - 42391100
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  42391207 acagcttcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 42391108  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  42391107 tgcccttt 42391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 10693180 - 10693072
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||| |||     
T  10693180 acagcctcttgtgtaaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggt 10693081  T
Q  196 tgcccttta 204  Q
    |||||||||    
T  10693080 tgcccttta 10693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 48735225 - 48735121
Alignment:
Q  112 cctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctgcc 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||| ||||    
T  48735225 cctcttgtgtaaaacacggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 48735126  T
Q  200 cttta 204  Q
    |||||    
T  48735125 cttta 48735121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 2663042 - 2662984
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2663042 acagcctcttgtgtaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccct 2662984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 35787416 - 35787319
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||  ||||| ||||||||||||||| ||  |||||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  35787416 gggtaaccttggtgcaaccggtaaagttgttgtcctggaacagcctcttgtgtaaaaacatggtaaggttgcgtacaatacaccaaatggcgggaccc 35787319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 42476899 - 42477005
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc------------tgcatatgcgggagctctagtgcaccgggc 195  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||| ||     
T  42476899 acagtctcttgtgtaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcctaggctctgcatatgcgggagctctagtgcaccaggt 42476998  T
Q  196 tgccctt 202  Q
    |||||||    
T  42476999 tgccctt 42477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 31591212 - 31591109
Alignment:
Q  112 cctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc------------tgcatatgcgggagctctagtgcaccgggctgcc 199  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||            ||||||||||||||||||||||||||||| ||||    
T  31591212 cctcttgtgtaaaacagagtaaggctgcgtacaatacaataaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgcc 31591113  T
Q  200 cttt 203  Q
    ||||    
T  31591112 cttt 31591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 38604553 - 38604611
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  38604553 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagaccc 38604611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 2541128 - 2541069
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  2541128 acagcctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaaatggtgggaccc 2541069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 23419783 - 23419724
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  23419783 acagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccc 23419724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 11741821 - 11741875
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  11741821 acagcttctagtgtaaaatagggtaaggctgcgtacaatacaccaaatggtggga 11741875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 19265841 - 19265899
Alignment:
Q  108 acagcctcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  19265841 acagccgcttgtgtaaaaagagggtaaggctgcgtacaatacaccaaatggtgggaccc 19265899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 33872014 - 33871960
Alignment:
Q  112 cctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  33872014 cctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccc 33871960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 19426998 - 19426938
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||||||    
T  19426998 acagcctcttgtgtaaaaaatagggtaagactgcgtacaatacaccaaatggtgggaccct 19426938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 42798695 - 42798755
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||| |||||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  42798695 acagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccct 42798755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 48735304 - 48735259
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  48735304 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 48735259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 2541202 - 2541158
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  2541202 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 2541158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 11617693 - 11617638
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  11617693 cctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccc 11617638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 27629660 - 27629719
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||    
T  27629660 acagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaatggtgggaccc 27629719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 32758214 - 32758258
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  32758214 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 32758258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 7879680 - 7879723
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  7879680 aaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccc 7879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 13805130 - 13805185
Alignment:
Q  110 agcctcttgtgtaaaacaggg-taaggctgcgtacaatacaccaaatggtgggacc 164  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13805130 agcctctggtgtaaaacaggggtaaggctgtgtacaatacaccaaatggtgggacc 13805185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 22699151 - 22699108
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgac 22699108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 34626316 - 34626261
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  34626316 acagcctcctgtgtaaaaacagggtaaggctgcgttcaatacaccaaatggtggga 34626261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 42798623 - 42798666
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 42798666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 43557426 - 43557469
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgac 43557469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 47078034 - 47077991
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 47077991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 47716485 - 47716546
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  47716485 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 47716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 5180337 - 5180295
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgac 5180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 18326989 - 18327031
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 18327031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 40463903 - 40463961
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  40463903 acagtctcttgtgtaaaaactgggtaaggctgcgtataatacaccaaatggtgggaccc 40463961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 46354148 - 46354190
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 46354190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 28362251 - 28362195
Alignment:
Q  111 gcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||    
T  28362251 gcctcttgtgtaaaaaacttggtaaggctgcgtacaatacaccaaatggtgggaccc 28362195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 35334997 - 35334952
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  35334997 atgagggataaccttggcgcaactggtaaagttgttgtcatgtgac 35334952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 42496018 - 42495973
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  42496018 atgaggggtaaccttggcgcaactggtaaagttgttgtcatatgac 42495973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 42805476 - 42805521
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  42805476 atgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgac 42805521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 18512555 - 18512503
Alignment:
Q  114 tcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  18512555 tcttgtgtaaaaatagggtaaggctgcgtacaatacaccgaatggtgggaccc 18512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 19266492 - 19266532
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  19266492 aaaacagggtaaggctgcgtacaatacaccaaattgtggga 19266532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 21172188 - 21172148
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 21172148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 34626390 - 34626346
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  34626390 atgaggggtaaccttagcgcaactggtaaagttgttgtcatgtga 34626346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 48123593 - 48123534
Alignment:
Q  108 acagcctcttgtgtaaa--acagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||  |||||||||  |||| |||||||||||||||||||||||||    
T  48123593 acagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaatggtgggaccc 48123534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 8149038 - 8148995
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  8149038 aaaatagggtaaggttgcgtacaatacaccaaatggtgggaccc 8148995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 14099099 - 14099056
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  14099099 aaaacaggttaagactgcgtacaatacaccaaatggtgggaccc 14099056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 14409116 - 14409073
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  14409116 aaaacaggttaagactgcgtacaatacaccaaatggtgggaccc 14409073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 14732999 - 14732960
Alignment:
Q  70 ggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgac 14732960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 42805550 - 42805611
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||  |||||||||||||    
T  42805550 acagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccc 42805611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 43557498 - 43557559
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||  |||||||||||||    
T  43557498 acagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccc 43557559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 46354224 - 46354281
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  46354224 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 46354281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 1408485 - 1408542
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||  || |||||||||| |||||||||| |||||||||||||||    
T  1408485 agcctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagcaaatggtgggaccc 1408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 18747512 - 18747621
Alignment:
Q  108 acagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtgggaccc------------tgcatatgcgggagctctagtgcaccg 192  Q
    ||||||| ||||||||||   ||||||||||||||||| |||||||||| |||||||||||            ||| |||||||||||| ||||||||||    
T  18747512 acagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaattggtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccg 18747611  T
Q  193 ggctgccctt 202  Q
    ||||||||||    
T  18747612 ggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 16341304 - 16341352
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  16341304 acagcctcttgtgtaaaaaacagggtaaggctacgtacaatacaccaaa 16341352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 27889399 - 27889366
Alignment:
Q  132 aaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||    
T  27889399 aaggctgcgtacaatacaccaaatggtgggaccc 27889366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 47077962 - 47077905
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||||| || |||| | |||||||||||||| ||||||||||||||    
T  47077962 acagtctcttgtgtaaaatagagtaaagttgcgtacaatacacaaaatggtgggaccc 47077905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 42476826 - 42476870
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgtgac 42476870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 2663112 - 2663069
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgac 2663069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 7193039 - 7193082
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| || |||| |||||||||||||||||||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgac 7193082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 22699063 - 22699017
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccct 166  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||    
T  22699063 aaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccct 22699017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 28078225 - 28078182
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| ||| | |||||||||||||||||||||||    
T  28078225 aaaacagggtaaggttgcatgcaatacaccaaatggtgggaccc 28078182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 32233239 - 32233188
Alignment:
Q  112 cctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||||||| ||||||||||| ||||| | |||||||||||||||||    
T  32233239 cctcttgtgtaaaaacagggtaaggcagcgtatattacaccaaatggtggga 32233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 35334909 - 35334866
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  35334909 aaaacagggtaagactgtgtacaatacaccgaatggtgggaccc 35334866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 42798761 - 42798804
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||    
T  42798761 ggaccctgcatatgcgggagctatagtgcatcgggttgcccttt 42798804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 8149126 - 8149084
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| | |||||||||| ||||||||||||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgac 8149084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 12473256 - 12473298
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||||||| ||||| |||||| |||||||||||||||||||    
T  12473256 atgaggggtagccttggcgcaaccggtaaagttgttgtcatgt 12473298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 21566530 - 21566564
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggct 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  21566530 accctgcatatgcgggagctttagtgcaccgggct 21566564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 36602540 - 36602582
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  36602540 gaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 36602582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 11741890 - 11741927
Alignment:
Q  165 ctgcatatgcgggagctctagtgcaccgggctgccctt 202  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  11741890 ctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 12473334 - 12473378
Alignment:
Q  112 cctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||    
T  12473334 cctcttgtgtcaaaaacagggtaaggatgcgtacaatacaccaaa 12473378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 29140538 - 29140501
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgt 29140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 29907445 - 29907505
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||||||| |  | |||||||||||| ||||||||| ||||||||||||||    
T  29907445 acagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtgggaccc 29907505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 32233176 - 32233135
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||| |||||||  ||||||||||||||||||||    
T  32233176 accctgcatatgagggagcttcagtgcaccgggctgcccttt 32233135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 40463837 - 40463874
Alignment:
Q  72 taaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgac 40463874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 10693245 - 10693209
Alignment:
Q  73 aaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgac 10693209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 11617754 - 11617726
Alignment:
Q  81 cgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||||||||||||||||    
T  11617754 cgcaactggtaaagttgttgtcatgtgac 11617726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 19427055 - 19427027
Alignment:
Q  81 cgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||||||||||||||||    
T  19427055 cgcaactggtaaagttgttgtcatgtgac 19427027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 21447544 - 21447584
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||||||||||| |||||||| |||| ||||||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgt 21447584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 25198679 - 25198719
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| || ||||||||||||||||||||| ||||    
T  25198679 gggtaaccttggcgtaactggtaaagttgttgtcatatgac 25198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 28078313 - 28078269
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| || ||||||| || ||||||||||||||||||    
T  28078313 tgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgac 28078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 36267900 - 36267868
Alignment:
Q  133 aggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||||||||||| ||||||    
T  36267900 aggctgcgtacaatacaccaaatggttggaccc 36267868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 42805625 - 42805661
Alignment:
Q  167 gcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  42805625 gcatatgcgggagctttagtgcaccgggttgcccttt 42805661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 1354864 - 1354757
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  1354864 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 1354765  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  1354764 tgcccttt 1354757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 1346990 - 1347097
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  1346990 acagccacttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 1347089  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  1347090 tgcccttt 1347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 25557751 - 25557858
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |            |||||||||||||||||||||||||||||||||||     
T  25557751 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 25557850  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  25557851 tgcccttt 25557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 26097186 - 26097293
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |            |||||||||||||||||||||||||||||||||||     
T  26097186 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 26097285  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  26097286 tgcccttt 26097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 28007656 - 28007711
Alignment:
Q  110 agcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  28007656 agcctcttgtgtaaaacagggtcaggctgcgtacaatacaccaaatgctgggaccc 28007711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 23240931 - 23240874
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||    
T  23240931 acagcctcttgtgtaaaacagggtaagtttgcgtacaatataccaattggtgggaccc 23240874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 1941885 - 1941940
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  1941885 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccgaatggtgggaccc 1941940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 1346918 - 1346961
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 1346961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 1354936 - 1354893
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 1354893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 12222026 - 12221965
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  12222026 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 12221965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 29355966 - 29355905
Alignment:
Q  108 acagcctcttgtgtaa--aacagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||    
T  29355966 acagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 29355905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 3815256 - 3815215
Alignment:
Q  68 ggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 3815215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 8409195 - 8409240
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||    
T  8409195 atgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgac 8409240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 33138875 - 33138919
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
T  33138875 aaaacagagtaaggccgcgtacaatacaccaaatggtgggaccct 33138919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 9161075 - 9161120
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||    
T  9161075 atgaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgac 9161120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 9161149 - 9161209
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||||||||| ||| |||||||||||||||||||| ||  |||||||||||||    
T  9161149 acagcctcttgtgtaaaaacagagtaaggctgcgtacaatacatcaataatggtgggaccc 9161209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 14975263 - 14975218
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||    
T  14975263 atgagggataaccttggcgcaaccggtaaagttgttgtcatgtgac 14975218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 10734948 - 10734904
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||    
T  10734948 ggaccctgcgtatgcgggagctttagtccaccgggctgcccttta 10734904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 18277302 - 18277243
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||| || |||||  |||||||||||||||||||    
T  18277302 acagcctcttgtgtaaaaatcagggtaaggttgagtacagaacaccaaatggtgggaccc 18277243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 1941809 - 1941852
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgac 1941852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 12892101 - 12892144
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||    
T  12892101 ggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 12892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 13905084 - 13905034
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgg 160  Q
    ||||||||||||||  |||||||||||||| |||||| |||||||||||||    
T  13905084 cctcttgtgtaaaaaacagggtaaggctgcatacaattcaccaaatggtgg 13905034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 24734591 - 24734630
Alignment:
Q  70 ggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgac 24734630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 203
Target Start/End: Original strand, 25997749 - 25997784
Alignment:
Q  168 catatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25997749 catatgcgggagctctagtgcaccgggttgcccttt 25997784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 33923009 - 33922966
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgac 33922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 3815156 - 3815126
Alignment:
Q  136 ctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||||||||||||||||||||||||||    
T  3815156 ctgcgtacaatacaccaaatggtgggaccct 3815126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 6024187 - 6024229
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||  ||| ||||||||||||||||||||||||||||    
T  6024187 gaggggtaattttgacgcaactggtaaagttgttgtcatgtga 6024229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 15866218 - 15866176
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||||||| | |||||||||||||||||| |||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtga 15866176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 7947477 - 7947433
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    |||| |||||||||  |||||||||||||||||||||||||||||    
T  7947477 cctcctgtgtaaaaaccagggtaaggctgcgtacaatacaccaaa 7947433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 12222088 - 12222055
Alignment:
Q  76 cttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| |||||||||||||||||||||||||||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgac 12222055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 151
Target Start/End: Complemental strand, 14341163 - 14341134
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc 151  Q
    ||||||||||||||||||||||||||||||    
T  14341163 aaaacagggtaaggctgcgtacaatacacc 14341134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 6024259 - 6024306
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 153  Q
    ||||||||||||||||||  || |||||| ||||||||||||||||||    
T  6024259 acagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaa 6024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 8409272 - 8409311
Alignment:
Q  111 gcctcttgtgtaaaa--cagggtaaggctgcgtacaatac 148  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  8409272 gcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 15865948 - 15865907
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||| ||||||||  |||||||||||||||||||||    
T  15865948 aaaacagggtaaagctgcgta--atacaccaaatggtgggaccc 15865907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 15866130 - 15866089
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||| ||||||||  |||||||||||||||||||||    
T  15866130 aaaacagggtaaagctgcgta--atacaccaaatggtgggaccc 15866089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 32579474 - 32579510
Alignment:
Q  129 ggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  32579474 ggtaagcctgcgtacaataccccaaatggtgggaccc 32579510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 32703450 - 32703557
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  32703450 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 32703549  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  32703550 tgcccttt 32703557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 35710339 - 35710446
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc------------tgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||            |||||||||||||||||||||||||||||     
T  35710339 acagcctcttgtgtaaaatagggtaaggctgcgttcaatacaccaaatggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggt 35710438  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  35710439 tgcccttt 35710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 7368424 - 7368481
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7368424 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaattggtgggaccc 7368481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 8170091 - 8170034
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8170091 acagccttttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 8170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 41014345 - 41014403
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41014345 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 41014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 2838805 - 2838860
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2838805 acagcatcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtggga 2838860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 16880756 - 16880698
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  16880756 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgtgacc 16880698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 7097868 - 7097810
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  7097868 acagcctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgagaccc 7097810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 19143047 - 19142993
Alignment:
Q  112 cctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  19143047 cctcttgtgtaaaaacagggtaaggctgcgtacagtacaccaaatggtgggaccc 19142993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 34154908 - 34154813
Alignment:
Q  121 taaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||| ||||||||||||||||||||||||||||||||||||            ||||||||||||||| ||||||||||||||||| |||||||||    
T  34154908 taaatcagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttta 34154813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 41014271 - 41014316
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  41014271 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 41014316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 24448916 - 24448975
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  24448916 acagccttttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccc 24448975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 38879534 - 38879578
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  38879534 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 38879578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 1565385 - 1565428
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 1565428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 16028667 - 16028624
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  16028667 ggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 16028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 24448844 - 24448887
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 24448887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 43574648 - 43574691
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  43574648 aaaacagggtaaggctgcgtacaatataccaaatggtgggaccc 43574691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 13801877 - 13801817
Alignment:
Q  109 cagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  13801877 cagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 13801817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 22907973 - 22907915
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||    
T  22907973 acagcctcttgtgtaaaaacagagtaaggttgcatacaatacaccaaatggtgggaccc 22907915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 4619213 - 4619154
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  4619213 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 4619154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 29334421 - 29334481
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca-aatggtgggaccc 165  Q
    ||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||    
T  29334421 acagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggaccc 29334481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 37024663 - 37024626
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaa 145  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37024663 acagcctcttgtgtaaaacagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 4619284 - 4619244
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 4619244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 30877607 - 30877563
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||||||||||||| |||||||||||||||||||| |||||||||    
T  30877607 ggaccctgcatatgtgggagctctagtgcaccgggttgcccttta 30877563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 35710267 - 35710307
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 106  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 35710307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 37024736 - 37024692
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  37024736 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 37024692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 43334159 - 43334199
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 43334199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 8170163 - 8170120
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgtgac 8170120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 19438703 - 19438746
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgac 19438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 20135630 - 20135691
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||  |||||||||||||    
T  20135630 acagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccc 20135691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 27328778 - 27328839
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  27328778 acagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 27328839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 38879607 - 38879668
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||  |||||||||||||    
T  38879607 acagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 38879668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 41425990 - 41426033
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  41425990 aaaacagggtaaggctgcatacaatacaccaattggtgggaccc 41426033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 2838733 - 2838775
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 2838775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 19438758 - 19438800
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgccctt 202  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  19438758 ggaccctgcatatgcgggagctctagtgcaccaggttgccctt 19438800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 43334245 - 43334290
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  43334245 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 43334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 22600499 - 22600536
Alignment:
Q  125 acagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22600499 acagggtaaggctgtgtacaatacaccaaatggtggga 22600536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 7368488 - 7368528
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgccc 200  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  7368488 ggaccctgcatatgtgggagctctagtgcaccgggttgccc 7368528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 11462922 - 11462958
Alignment:
Q  165 ctgcatatgcgggagctctagtgcaccgggctgccct 201  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11462922 ctgcatatgcgggagctctagtgcaccgggttgccct 11462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 22600407 - 22600451
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| || |||||||||||||||| |||||||||    
T  22600407 tgaggggtaaccttgacgtaactggtaaagttgttatcatgtgac 22600451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 23974734 - 23974777
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  23974734 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgac 23974777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 27328709 - 27328749
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  27328709 gggtaaccttgacgcaattggtaaagttgttgtcatgtgac 27328749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 41956884 - 41956924
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcat 104  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  41956884 atgaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 209032 - 208977
Alignment:
Q  112 cctcttgtgtaaaa-cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||    
T  209032 cctcttgtgtaaaaacagggtaaggctgcattcaatacaccaaaatggtgggaccc 208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 3771381 - 3771424
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||| | |||||||||||| |||||||||||    
T  3771381 aaaacagggtaaggctgtgaacaatacaccaattggtgggaccc 3771424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 10943887 - 10943845
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  10943887 ggaccctgca-atgcgggagctttagtgcaccgggctgcccttt 10943845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 16957406 - 16957449
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  16957406 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 16957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 38879675 - 38879718
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  38879675 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38879718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 192
Target Start/End: Complemental strand, 22861710 - 22861680
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccg 192  Q
    |||||||||||||||||||||||||||||||    
T  22861710 accctgcatatgcgggagctctagtgcaccg 22861680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 31299591 - 31299629
Alignment:
Q  71 gtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgac 31299629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 1405244 - 1405273
Alignment:
Q  137 tgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||||||||||||||||    
T  1405244 tgcgtacaatacaccaaatggtgggaccct 1405273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 1405281 - 1405322
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||| ||||||  ||||||||    
T  1405281 accctgcatatgcgggagctctagtacaccggattgcccttt 1405322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 1850670 - 1850723
Alignment:
Q  112 cctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||||    
T  1850670 cctcttgtgtaaaaacagaataagggtgcgtacaatacatcaaatggtgggacc 1850723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 13774957 - 13774998
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgccct 201  Q
    ||||||||| |||||||||||| |||||||||||||| ||||    
T  13774957 ggaccctgcgtatgcgggagctttagtgcaccgggctaccct 13774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 30006369 - 30006410
Alignment:
Q  124 aacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  30006369 aacagggtaaggctgtgtacattacactaaatggtgggaccc 30006410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 1565524 - 1565567
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||    
T  1565524 ggaccctgcatatgtgggagct-tagtgcaccgggttgcccttta 1565567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 5873430 - 5873374
Alignment:
Q  108 acagcctcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggtgggac 163  Q
    ||||||||||||||||||  |||||||||||  ||||| |||||||| |||||||||    
T  5873430 acagcctcttgtgtaaaaatagggtaaggctaagtacactacaccaattggtgggac 5873374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 9794471 - 9794431
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    ||||||||||||| |||| ||||||||||||||| ||||||    
T  9794471 aaaacagggtaagactgcatacaatacaccaaatagtggga 9794431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 12575703 - 12575659
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| ||||| |||||| | ||||||||||||||||||||    
T  12575703 ggaccctgcgtatgcaggagctttggtgcaccgggctgcccttta 12575659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 22187238 - 22187282
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  22187238 tgaggggtaactttggcgcaactagtaaagttgttgtcatttgac 22187282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 22861844 - 22861804
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  22861844 gggtaaccttggcacaactgataaagttgttgtcatgtgac 22861804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 41014417 - 41014453
Alignment:
Q  167 gcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  41014417 gcatatgcgggagctttagtgcaccgggttgcccttt 41014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 42924927 - 42924895
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaa 154  Q
    |||||||||||||| ||||||||||||||||||    
T  42924927 aaaacagggtaaggttgcgtacaatacaccaaa 42924895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 38478389 - 38478282
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  38478389 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggt 38478290  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  38478289 tgcccttt 38478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 34725205 - 34725098
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||            |||||||||||||||||||||||||||||||||     
T  34725205 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacactaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 34725106  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  34725105 tgcccttt 34725098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 35253294 - 35253187
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||      
T  35253294 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggat 35253195  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  35253194 tgcccttt 35253187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 19414490 - 19414595
Alignment:
Q  110 agcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctg 197  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||| ||    
T  19414490 agcctcttatgtaaaacaggttaaggctgcgtacaatacaccaaatggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttg 19414589  T
Q  198 cccttt 203  Q
    ||||||    
T  19414590 cccttt 19414595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 32632665 - 32632607
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32632665 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 32632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 12126944 - 12126887
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12126944 acagcttcttgtgtaaaacagggtaaggctgcgtacaatacaccaaattgtgggaccc 12126887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 23768429 - 23768372
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggac 163  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  23768429 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 23768372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 31382322 - 31382264
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  31382322 acagcctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccc 31382264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 45812644 - 45812541
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||            |||||||||||||||||||||||||||||||||     
T  45812644 acagtctcttgtgtaaaagagggtaaggctgcatacaatacaccaaatggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccgggt 45812545  T
Q  196 tgcc 199  Q
    ||||    
T  45812544 tgcc 45812541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 10378828 - 10378738
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctgccc 200  Q
    ||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||| ||||||||||||||||||    
T  10378828 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 47214560 - 47214617
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  47214560 acagtctcttgtttaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccc 47214617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 46248062 - 46248003
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  46248062 acagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccc 46248003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 4349703 - 4349746
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4349703 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 4349746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 11596566 - 11596620
Alignment:
Q  112 cctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  11596566 cctcttgtgtaaaaacagggtaaggctgcgtataatacaccaaatggtgggaccc 11596620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 24564397 - 24564492
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatgg--tgggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||  |||||||||| |||||||||| ||||||||||  | ||||||||| ||||| |||||  |||||||||||| ||||||||    
T  24564397 cctcttgtgtaaaaaacagggtaagggtgcgtacaattcaccaaatggtcttggaccctgcctatgcaggagcgttagtgcaccgggttgcccttt 24564492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 34725278 - 34725234
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 34725234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 41319915 - 41319856
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  41319915 acagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccc 41319856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 18944620 - 18944663
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 18944663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 18944692 - 18944753
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  18944692 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccc 18944753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 22930248 - 22930205
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 22930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 30395837 - 30395776
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  30395837 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 30395776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 34714599 - 34714642
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34714599 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 34714642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 10668197 - 10668239
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 14617013 - 14617058
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  14617013 atgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 14617058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 14617087 - 14617196
Alignment:
Q  108 acagcctcttgtgtaaa--acagggtaaggctgcgtacaatacaccaaatggtggga------------ccctgcatatgcgggagctctagtgcaccgg 193  Q
    |||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||            ||||||||||||||||||| |||||||||||    
T  14617087 acagcctcttgtgtaaataacaaggtaaggttgcgtacaatacaccaaatggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgg 14617186  T
Q  194 gctgcccttt 203  Q
    | | ||||||    
T  14617187 gttacccttt 14617196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 17470455 - 17470407
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  17470455 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 17470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 19932935 - 19932890
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||    
T  19932935 atgaggggttaccttggcgcaactggtaaagttgttgtcatgtgac 19932890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 40424721 - 40424762
Alignment:
Q  68 ggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 40424762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 15505632 - 15505672
Alignment:
Q  125 acagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  15505632 acagggtaagactgcgtacaatacaccaaatggtgggaccc 15505672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 18724654 - 18724595
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||  ||||||||    
T  18724654 acagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaaatcttgggaccc 18724595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 41319988 - 41319944
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| | |||||||||||||||||||||||||||    
T  41319988 tgaggggtaaccttgacacaactggtaaagttgttgtcatgtgac 41319944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 46991857 - 46991912
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||    
T  46991857 cctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccgaatggtgggaccc 46991912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 4430119 - 4430080
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggg 161  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  4430119 aaaacagggtaagactgcgtacaatacaccaaatggtggg 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 6983904 - 6983861
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  6983904 aaaacagggtaagtatgcgtacaatacaccaaatggtgggaccc 6983861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 20004273 - 20004230
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 20004230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 21910742 - 21910699
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  21910742 aaaatagggtaaggttgcgtacaatacaccaaatggtgggaccc 21910699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 22324942 - 22324989
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaa 154  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22324942 acagcctcttgtgtaaaaacagggtaaggctgcatacaatacaccaaa 22324989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 25468368 - 25468314
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||| |||||    
T  25468368 cctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatggttggacc 25468314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 27201696 - 27201757
Alignment:
Q  108 acagcctcttgtgtaa--aacagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||  ||||||||||||||    
T  27201696 acagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 27201757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 32632737 - 32632694
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgac 32632694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 33223033 - 33223092
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||||    
T  33223033 acagcctcttgtgtaaaaacagggaaaggttgcgtacaatacaccaaaatggtgggaccc 33223092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 35005172 - 35005233
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||  ||||||||||||||    
T  35005172 acagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccc 35005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 45812716 - 45812673
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgac 45812673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 46248134 - 46248091
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgac 46248091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 46991781 - 46991824
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 46991824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 47214488 - 47214531
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgac 47214531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 50606518 - 50606561
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  50606518 ggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 50606561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 50760335 - 50760240
Alignment:
Q  108 acagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||||      | ||||||| |||||||||||| || ||||||||||||||||||    
T  50760335 acagcctcttgtgtataaaactgggtaaggctgcgtataatacaccaatccc--gaaccctgcgtatgcgggagctttaatgcaccgggctgcccttt 50760240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 6925151 - 6925208
Alignment:
Q  110 agcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||| |  ||||||||||||| |||||||||| |||||||||||||    
T  6925151 agcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaatggtgggaccc 6925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 18742052 - 18742007
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  18742052 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 18742007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 18742137 - 18742099
Alignment:
Q  71 gtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgac 18742099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 19932848 - 19932803
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  19932848 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 19932803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 23796581 - 23796623
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  23796581 gaccctgcatatgctggagctttagtgcaccgggctgcccttt 23796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 43768205 - 43768247
Alignment:
Q  123 aaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  43768205 aaacagggtaaggctgcctacaatacaccaattggtgggaccc 43768247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 30395903 - 30395866
Alignment:
Q  72 taaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||| |||||||||||||||||||||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgac 30395866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 44485211 - 44485159
Alignment:
Q  115 cttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||  || |||||||||||||||||||||||||||||| ||||||    
T  44485211 cttgtgtaaaagacatggtaaggctgcgtacaatacaccaaatggttggaccc 44485159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 45402077 - 45402114
Alignment:
Q  71 gtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga 45402114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 4349753 - 4349797
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  4349753 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 4349797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 8197019 - 8197063
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||    
T  8197019 tgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgac 8197063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 23768498 - 23768458
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  23768498 gggtaacctcgacgcaactggtaaagttgttgtcatgtgac 23768458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 25290143 - 25290183
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgac 25290183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 27474257 - 27474301
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  | |||||||||||||||||||||||||||    
T  27474257 tgaggggtaaccttagctcaactggtaaagttgttgtcatgtgac 27474301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 31442483 - 31442439
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  31442483 aaaacagggtaaggatgcgtacaatacaccaaaatggtgggaccc 31442439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 1517404 - 1517361
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| | ||||||||||||||||||||||| |||||||||||    
T  1517404 aaaacatgataaggctgcgtacaatacaccaattggtgggaccc 1517361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 10668274 - 10668335
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||  || ||||||| ||||||||||||||||  |||||||||||||    
T  10668274 acagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggaccc 10668335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 20004201 - 20004140
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||| ||||||||  || ||||||||||||||||||||||||  |||||||||||||    
T  20004201 acagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccc 20004140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 21723733 - 21723784
Alignment:
Q  108 acagcctcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggt 158  Q
    |||||||||||| |||||  |||||||||||| |||||||||||||||||||    
T  21723733 acagcctcttgtataaaaatagggtaaggctgagtacaatacaccaaatggt 21723784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 35117875 - 35117829
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||    
T  35117875 agcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaa 35117829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 38478461 - 38478418
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgac 38478418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 20004132 - 20004090
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||    
T  20004132 gaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20004090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 21723642 - 21723684
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||  | |||||||||||||||||||||||||||    
T  21723642 aggggtaaccttcgcacaactggtaaagttgttgtcatgtgac 21723684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 22930176 - 22930119
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||| |||||||||| |||||||||| || | ||||||||||||||||||||||||    
T  22930176 acagccttttgtgtaaaaacagggtaaggttgtg-acaatacaccaaatggtgggaccc 22930119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 23796514 - 23796567
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtg 159  Q
    ||||||||||||||||||  ||  |||||| |||||||||||||||||||||||    
T  23796514 acagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaaatggtg 23796567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 27474330 - 27474388
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||  |||||||||||||    
T  27474330 acagtctcttgtgtaaaaacagggcaaagctgcgtacaatacactgaatggtgggaccc 27474388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 44745892 - 44745854
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaat 146  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  44745892 acagcctcttgtgtaaaacaaggtaaagctgcgtacaat 44745854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 45402143 - 45402204
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggt--aagg-ctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||  |||  ||||||||||||||||||||||||||||||    
T  45402143 acagcctcttgtgtaaaaacagggttcaagttctgcgtacaatacaccaaatggtgggaccc 45402204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 46859131 - 46859173
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggac 163  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  46859131 aaaacagggtaagactgcgtacaatacaccaaaatggtgggac 46859173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 191
Target Start/End: Original strand, 47214625 - 47214655
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcacc 191  Q
    |||||||||||||||||||||||||||||||    
T  47214625 gaccctgcatatgcgggagctctagtgcacc 47214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 2435885 - 2435836
Alignment:
Q  117 tgtgtaaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||| |||| |||||||| |||||||||||||||| ||||||||||||||    
T  2435885 tgtgaaaaatagggtaagcctgcgtacaatacaccaaaatggtgggaccc 2435836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 8197095 - 8197151
Alignment:
Q  111 gcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||  || ||||||||| |||||| ||||||||||||| ||||||    
T  8197095 gcctcttgtgtaaaaaacatggtaaggctacgtacagtacaccaaatggtaggaccc 8197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 10163736 - 10163777
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtg 107  Q
    |||||||||| ||| |||||||| ||||||||||||||||||    
T  10163736 gaggggtaacattggcgcaactgataaagttgttgtcatgtg 10163777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 20999891 - 20999850
Alignment:
Q  162 accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||| || ||||||||| |||||||||||||||||||||    
T  20999891 accctgcgtacgcgggagctttagtgcaccgggctgcccttt 20999850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 27136757 - 27136701
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    ||||||||||||||  || ||||||| ||||||||||||||| ||||||||||||||    
T  27136757 cctcttgtgtaaaaaacatggtaaggttgcgtacaatacaccaaaatggtgggaccc 27136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 10668345 - 10668385
Alignment:
Q  163 ccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||| |||||||||||| |||||||||||| ||||||||    
T  10668345 ccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10668385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 16120834 - 16120874
Alignment:
Q  163 ccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  16120834 ccctgcatatgcgggagctttaatgcaccaggctgcccttt 16120874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 22325009 - 22325049
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgccct 201  Q
    |||||||| |||||||||||| ||||||||| |||||||||    
T  22325009 gaccctgcgtatgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 27201623 - 27201667
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  || || |||||||||||||||||||||||    
T  27201623 tgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgac 27201667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 34149069 - 34149010
Alignment:
Q  108 acagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||  ||| ||||||||| ||||||||| | ||||||||||| |||||    
T  34149069 acagcctcttgtgtagaaaatagggtaaggttgcgtacaaaagaccaaatggtgagaccc 34149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 50812005 - 50812037
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaa 154  Q
    |||||||||||||| ||||||||||||||||||    
T  50812005 aaaacagggtaaggttgcgtacaatacaccaaa 50812037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 21779369 - 21779261
Alignment:
Q  107 gacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccggg 194  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||    
T  21779369 gacagcctcttgtgtaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggg 21779270  T
Q  195 ctgcccttt 203  Q
     ||||||||    
T  21779269 ttgcccttt 21779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 9671207 - 9671264
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9671207 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 9671264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 23397792 - 23397900
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||            ||||||| |||||||||||||||||||||||||||     
T  23397792 acagcctcttgtgtaaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggt 23397891  T
Q  196 tgcccttta 204  Q
    |||||||||    
T  23397892 tgcccttta 23397900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 12024027 - 12023969
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12024027 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 12023969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 36871519 - 36871577
Alignment:
Q  108 acagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36871519 acagcctcttgtgtgaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 36871577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 8455425 - 8455366
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  8455425 acagcctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaaatggtgggaccc 8455366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 10546205 - 10546248
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10546205 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 10546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 22371096 - 22371139
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22371096 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 22371139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 25249846 - 25249791
Alignment:
Q  108 acagcctcttgtgta-aaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25249846 acagtctcttgtgtacaaacagggtaaggctgcgtacaatacaccaaatggtggga 25249791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 14444755 - 14444813
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  14444755 acagcctcttgtgtaaaaacagggtaaggctgtgtacgatacaccaaatggtgggaccc 14444813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 11514462 - 11514522
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||    
T  11514462 acagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaaatggtgggaccct 11514522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 27573647 - 27573700
Alignment:
Q  108 acagcctcttgtgta-aaacagggtaaggctgcgtacaatacaccaaatggtgg 160  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  27573647 acagcctcttgtgtataaacatggtaaggctgcgtacaatacaccaaatggtgg 27573700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 40762343 - 40762283
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||||    
T  40762343 acagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaatggtgggaccct 40762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 14530271 - 14530315
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  14530271 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 14530315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 17623594 - 17623649
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  17623594 cctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccc 17623649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 17668032 - 17668087
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  17668032 cctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccc 17668087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 25079900 - 25079856
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  25079900 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 25079856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 32781393 - 32781338
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  32781393 cctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccc 32781338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 39189603 - 39189559
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  39189603 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 39189559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 8455497 - 8455454
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 8455454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 12024099 - 12024056
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 12024056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 30826063 - 30826122
Alignment:
Q  108 acagcctcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||    
T  30826063 acagcctcttgtgtaaaaatagggtaaggttgcgtacaatacaccaaatggtggaaccct 30826122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 99372 - 99315
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||  |||||| || ||||||||||||||||||||||||||||| ||||    
T  99372 acagcctcttgtaaaaaacatggcaaggctgcgtacaatacaccaaatggtggaaccc 99315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 11514392 - 11514433
Alignment:
Q  68 ggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 11514433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 17896215 - 17896256
Alignment:
Q  68 ggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgac 17896256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 22371009 - 22371054
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  22371009 atgaggggtaaccttggcccaactggtaaagttgttgtcatgtgac 22371054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 23145807 - 23145747
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||| |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||    
T  23145807 acagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaattggtgggaccct 23145747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 23397718 - 23397763
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  23397718 atgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 23397763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 23557597 - 23557537
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||| |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||    
T  23557597 acagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaattggtgggaccct 23557537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 24200734 - 24200686
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  24200734 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 24200686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 4516460 - 4516401
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||||| |||||||||||    
T  4516460 acagcctcttgtgtaaaaaacagggcaacgctgcgtacaatacaccaattggtgggaccc 4516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 10543727 - 10543785
Alignment:
Q  111 gcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    |||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||    
T  10543727 gcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 10543785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 21377178 - 21377123
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||    
T  21377178 cctcttgtgtaaaaaacagggtaaggctgggtacaatgcaccaaatggtgggaccc 21377123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 21779441 - 21779397
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  21779441 tgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgac 21779397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 25632551 - 25632591
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  25632551 aaaacaggataaggctgcgtacaatacaccaaatggtggga 25632591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 5450328 - 5450371
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  5450328 aaaacatggtaaggctgcgtacaatacaccaaagggtgggaccc 5450371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 9671134 - 9671177
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 9671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 17705449 - 17705492
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 17705492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 17896302 - 17896345
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  17896302 aaaatagggtaaggctgcgtacaatataccaaatggtgggaccc 17896345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 10543653 - 10543695
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgac 10543695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 14544018 - 14544060
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgac 14544060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 24200805 - 24200763
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgac 24200763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 25249920 - 25249875
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||    
T  25249920 atgatgggtaaccttggcgcaattggtaaagttgttgtcatgtgac 25249875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 27573581 - 27573618
Alignment:
Q  72 taaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgac 27573618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 14530412 - 14530456
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  14530412 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 14530456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 40416914 - 40416870
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||    
T  40416914 ggaccctgcatatgcgagagctttagtgcaccgggttgcccttta 40416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 7214488 - 7214531
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| ||| | |||||||||||||||||||||||||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgac 7214531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 9671271 - 9671314
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  9671271 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 9671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 10543792 - 10543835
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  10543792 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 10546255 - 10546298
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  10546255 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10546298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 14530344 - 14530405
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||| |||||  |||||||||||| ||||||||||||||  |||||||||||||    
T  14530344 acagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccc 14530405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 22371204 - 22371247
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  22371204 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 22371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 24890453 - 24890496
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||    
T  24890453 aaaacaaggtaaggctgcatacaatacaccaattggtgggaccc 24890496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 25079810 - 25079767
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||    
T  25079810 aaaacaaggtaaggatgcgtacaatacaccgaatggtgggaccc 25079767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 25641543 - 25641586
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||| | ||||||||||||||||||| |||||||||    
T  25641543 aaaacagggtaaagttgcgtacaatacaccaaattgtgggaccc 25641586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 27466311 - 27466268
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||    
T  27466311 gaggcgtaacattggcgcaactggtaaagttgttgtcatgtgac 27466268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 30864525 - 30864474
Alignment:
Q  108 acagcctcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggt 158  Q
    ||||||||||||||||||  ||||||||| ||||||||||| ||||||||||    
T  30864525 acagcctcttgtgtaaaaatagggtaagggtgcgtacaatataccaaatggt 30864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 34080193 - 34080236
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||||||| | |||||||||||| ||||||||    
T  34080193 ggaccctgcatatgcgggagttttagtgcaccgggttgcccttt 34080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 39189547 - 39189508
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcc 199  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  39189547 ggaccccgcatatgcgggagctctagtgcaccgggttgcc 39189508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 39914398 - 39914355
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| || |||||||||||| |||||||||||||    
T  39914398 aaaacagggtaaggatgtgtacaatacaccgaatggtgggaccc 39914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 44643565 - 44643608
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||| |||||||||||||||||  |||||||||||||||||    
T  44643565 aaaacagagtaaggctgcgtacaatgtaccaaatggtgggaccc 44643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 26684803 - 26684761
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||| ||  ||||||||||||||||||||||||||||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgtga 26684761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 44643616 - 44643658
Alignment:
Q  161 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||| |||||||||||  |||||||||||||||||||||    
T  44643616 gaccctgcgtatgcgggagccttagtgcaccgggctgcccttt 44643658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 2003629 - 2003592
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtg 159  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  2003629 aaaacagggtaaggatgcgtacaatacaacaaatggtg 2003592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 7214560 - 7214604
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacac 150  Q
    |||| |||||||||||||  |||||||||||||||||||||||||    
T  7214560 acagtctcttgtgtaaaatacagggtaaggctgcgtacaatacac 7214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 15296516 - 15296468
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 154  Q
    ||||||| ||||||||||  |||||||||||||||||||||| ||||||    
T  15296516 acagcctgttgtgtaaaatacagggtaaggctgcgtacaatataccaaa 15296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 19977823 - 19977767
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||| ||||||| |  || ||||| ||||||||||||||||||||||||||    
T  19977823 acagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaatggtggga 19977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 19977893 - 19977852
Alignment:
Q  68 ggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| || ||||||| ||||||||||||||||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgac 19977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 41409954 - 41409995
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgccct 201  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  41409954 ggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 13245181 - 13245145
Alignment:
Q  129 ggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  13245181 ggtaaggctgcgtacattacactaaatggtgggaccc 13245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 39499323 - 39499283
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||| ||||||| ||||||||||||||| ||||||||||||    
T  39499323 aaaatagggtaaagctgcgtacaatacatcaaatggtggga 39499283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 40416964 - 40416920
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||| ||||||| |||||||||||||| || |||||||||    
T  40416964 aaaacagggaaaggctgtgtacaatacaccaattgatgggaccct 40416920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 44449477 - 44449445
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaa 154  Q
    |||||||| ||||||||||||||||||||||||    
T  44449477 aaaacaggataaggctgcgtacaatacaccaaa 44449445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 30605 - 30712
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  30605 acagcctcttgtgtaaaacagggtagggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 30704  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  30705 tgcccttt 30712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 30533 - 30576
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 30576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 20225014 - 20225117
Alignment:
Q  112 cctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggctgcc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||| ||||    
T  20225014 cctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 20225113  T
Q  200 cttt 203  Q
    ||||    
T  20225114 cttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 48598932 - 48598825
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc------------tgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||| |||||||||||||||||||     
T  48598932 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggt 48598833  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  48598832 tgcccttt 48598825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 9832420 - 9832363
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9832420 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 9832363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 29208002 - 29207900
Alignment:
Q  111 gcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctgc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||| |||    
T  29208002 gcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgc 29207903  T
Q  199 cct 201  Q
    |||    
T  29207902 cct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 47528637 - 47528580
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47528637 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 47528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 5648285 - 5648343
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5648285 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 5648343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 11054255 - 11054148
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||| |            |||||||||||||||||||||||||||||||||||     
T  11054255 acagtctcttgtgtaaaacagggtaagactgcgtacaatacaccaaatggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 11054156  T
Q  196 tgcccttt 203  Q
    ||||||||    
T  11054155 tgcccttt 11054148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 39077903 - 39077800
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||            |||||||||||||||||||||||||||||||||||     
T  39077903 acagcctcttgtgtaaaacagggtaaggttgcgtacaatataccaaatggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccgggt 39077804  T
Q  196 tgcc 199  Q
    ||||    
T  39077803 tgcc 39077800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 6430734 - 6430677
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6430734 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 6430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 17043503 - 17043444
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  17043503 acagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggtgggaccc 17043444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 5306772 - 5306714
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  5306772 acagcctcttgtgtaaaatcagggtaaggttgcgtacaatacaccaaatggtgggaccc 5306714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 49796824 - 49796882
Alignment:
Q  108 acagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  49796824 acagcctcttgtgttaaaacatggtaaggctgcgtacaatacaccaaatggtgggaccc 49796882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 54175090 - 54175200
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacacc-aaatggtg-------------ggaccctgcatatgcgggagctctagtgcaccg 192  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||             |||||||||||||||||||||| ||||||||||    
T  54175090 acagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccg 54175189  T
Q  193 ggctgcccttt 203  Q
    |||||||||||    
T  54175190 ggctgcccttt 54175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 8473729 - 8473672
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  8473729 acagcctcttgtgtttaacagggtaaggctgcatacaatacaccaaatggtgggaccc 8473672  T

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Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 47443983 - 47444042
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  47443983 acagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 47444042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 30639406 - 30639514
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccggg 194  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||            |||||||||||||||||||||| |||||||| |||    
T  30639406 acagactcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactggg 30639505  T
Q  195 ctgcccttt 203  Q
     ||||||||    
T  30639506 ttgcccttt 30639514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 40915855 - 40915910
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtggga 162  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  40915855 acagcctcttgtgtaaaaacaaggtaaggctgcgtacaatacaccaaatggtggga 40915910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 7909389 - 7909331
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  7909389 acagtctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccc 7909331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 48599007 - 48598961
Alignment:
Q  63 gatgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  48599007 gatgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 48598961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 20639768 - 20639708
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  20639768 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccc 20639708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 5648212 - 5648256
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  5648212 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 5648256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 6430807 - 6430763
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  6430807 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 6430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 20224937 - 20224981
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  20224937 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 20224981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 51865147 - 51865092
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtggg 161  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  51865147 acagcctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaaatggtggg 51865092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 10277864 - 10277813
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg 159  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  10277864 acagcctcttgtataaaataggataaggctgcgtacaatacaccaaatggtg 10277813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 10660358 - 10660401
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 10660401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 10874503 - 10874546
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 10874546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 19027890 - 19027933
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19027890 aaaacagggtaaggctgcgtacaatacaccaattggtgggaccc 19027933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 20405047 - 20405090
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgac 20405090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 23501747 - 23501790
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 23501790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 38786701 - 38786744
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  38786701 ggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 38786744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 55766647 - 55766604
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgac 55766604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 55830902 - 55830860
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtga 55830860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 5306846 - 5306801
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||    
T  5306846 atgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgac 5306801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 9987939 - 9987884
Alignment:
Q  112 cctcttgtgtaaa--acagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||  | ||||||||||||| |||||||||||||||||||||||||    
T  9987939 cctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaatggtgggaccc 9987884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 14590790 - 14590834
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgac 14590834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 16911519 - 16911559
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 16911559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 18969698 - 18969738
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 18969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 23501813 - 23501924
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtg------------ggaccctgcatatgcgggagctctagtgcacc 191  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||  |||||||            |||||||||||||||||||||| |||||||||    
T  23501813 acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcacc 23501912  T
Q  192 gggctgcccttt 203  Q
    ||| ||||||||    
T  23501913 gggttgcccttt 23501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 25629075 - 25629134
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  25629075 acagtctcttgtgtaaaaaatagggtaaggctgtgtacaatacaccaaatggtgggaccc 25629134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 30639333 - 30639377
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgac 30639377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 35567196 - 35567255
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||| |||||||||||  ||||||||||||| |||||| |||||||||||||||||||    
T  35567196 acagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaatggtgggaccc 35567255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 11054327 - 11054284
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgac 11054284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 13256578 - 13256535
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 13256535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 16911588 - 16911649
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||  |||||||||||||    
T  16911588 acagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccc 16911649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 21646918 - 21646961
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgac 21646961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 28494247 - 28494282
Alignment:
Q  164 cctgcatatgcgggagctctagtgcaccgggctgcc 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  28494247 cctgcatatgcgggagctctagtgcaccgggctgcc 28494282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 30496429 - 30496374
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggac 163  Q
    |||||||||||||||||   |||||||||||| ||||||||||||||||| |||||    
T  30496429 acagcctcttgtgtaaacacgggtaaggctgcatacaatacaccaaatggggggac 30496374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 30690269 - 30690226
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  30690269 aaaacagggtaaggctgcatacaatacaccaattggtgggaccc 30690226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 32484325 - 32484368
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  32484325 ggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 32484368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 47528709 - 47528666
Alignment:
Q  66 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 47528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 13256508 - 13256463
Alignment:
Q  110 agcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 153  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  13256508 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 13256463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 14590880 - 14590922
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  14590880 aaaacagggtaaggctgcatacaatacatcaaatggtgggacc 14590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 41018898 - 41018844
Alignment:
Q  112 cctcttgtgtaaaac-agggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||    
T  41018898 cctcttgtgtaaaattagggtaaggctacgtacaatacaccaaatagtgggaccc 41018844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 17079745 - 17079700
Alignment:
Q  121 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||    
T  17079745 taaaacagggtaaggctgcatacaatacgctaaatggtgggaccct 17079700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 5313177 - 5313133
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 108  Q
    |||| ||||||||||| || |||||||||||||||||||||||||    
T  5313177 atgacgggtaaccttggcgtaactggtaaagttgttgtcatgtga 5313133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 11394944 - 11394988
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  11394944 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 11394988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 11404671 - 11404715
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  11404671 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 11404715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 14983860 - 14983919
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| |  |||||||| ||| |||||||||| ||||||||||||||    
T  14983860 acagcctcttgtgtaaaaaatagggtaaggttgcctacaatacactaaatggtgggaccc 14983919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 16408712 - 16408665
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 153  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  16408712 acagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaa 16408665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 16408777 - 16408741
Alignment:
Q  73 aaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgac 16408741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 17315476 - 17315436
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 17315436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 20225168 - 20225212
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    |||||| ||||||||||||||| |||||||||||| |||||||||    
T  20225168 ggaccccgcatatgcgggagctttagtgcaccgggttgcccttta 20225212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 25343229 - 25343261
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaa 154  Q
    |||||||||||||||||||||||||||||||||    
T  25343229 aaaacagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 37494881 - 37494936
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  |||||||||| ||| ||||||| |||||||||||||||||    
T  37494881 cctcttgtgtaaaaaacagggtaaggttgcatacaatataccaaatggtgggaccc 37494936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 38755951 - 38755907
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  38755951 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 38755907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 39029170 - 39029111
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacac-caaatggtgggacc 164  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||  |||||||||||||    
T  39029170 acagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacacgaaaatggtgggacc 39029111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 40553980 - 40553936
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  40553980 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 40553936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 44363173 - 44363129
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttta 204  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  44363173 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 44363129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 47441639 - 47441580
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| ||||| |||||||  ||||||||||||| ||||||||||||||||||| ||||||    
T  47441639 acagtctcttttgtaaaaatcagggtaaggctgtgtacaatacaccaaatggttggaccc 47441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 8473660 - 8473621
Alignment:
Q  163 ccctgcatatgcgggagctctagtgcaccgggctgccctt 202  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  8473660 ccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 12711542 - 12711499
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||| |||||||| |||||||||||||||||||||| |||||||    
T  12711542 aaaatagggtaagactgcgtacaatacaccaaatggcgggaccc 12711499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 16408644 - 16408601
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||    
T  16408644 ggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 16408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 20225119 - 20225161
Alignment:
Q  125 acagggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccc 20225161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 21646990 - 21647051
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacacca--aatggtgggaccc 165  Q
    |||||||||||||||||| |  |||||||||||||||||||| ||||  |||||||||||||    
T  21646990 acagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggaccc 21647051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 35532084 - 35532127
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  35532084 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 35532127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 30352767 - 30352729
Alignment:
Q  71 gtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgac 30352729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 55766558 - 55766516
Alignment:
Q  123 aaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||||||||||  |||||||| ||||    
T  55766558 aaacagggtaaggctgcgtacaatacactgaatggtggaaccc 55766516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 7385585 - 7385525
Alignment:
Q  108 acagcctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||| ||||||||| |  |||||||| || || ||||||||||||||||||||||||    
T  7385585 acagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaatggtgggaccct 7385525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 19028013 - 19028046
Alignment:
Q  170 tatgcgggagctctagtgcaccgggctgcccttt 203  Q
    |||||||||||| |||||||||||||||||||||    
T  19028013 tatgcgggagctttagtgcaccgggctgcccttt 19028046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 20908723 - 20908686
Alignment:
Q  129 ggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  20908723 ggtaaggctgcgtacaatacaccaaaatggtgggaccc 20908686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 29879680 - 29879635
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| |||  ||||||| ||||||||||||||||||||    
T  29879680 atgaggggtaacattggtgcaactgataaagttgttgtcatgtgac 29879635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 16494258 - 16494305
Alignment:
Q  121 taaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccct 166  Q
    ||||||||||||| ||||| |||||||||||  |||||||||||||||    
T  16494258 taaaacagggtaaagctgcatacaatacaccaaaaatggtgggaccct 16494305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 25463152 - 25463207
Alignment:
Q  112 cctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| |  ||| |||| ||||||||| |||||||||||||||||||    
T  25463152 cctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaaatggtgggaccc 25463207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 30581559 - 30581515
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccc 165  Q
    |||||||||||||| || |||||||||||| ||||||||||||||    
T  30581559 aaaacagggtaagggtgtgtacaatacaccaaaatggtgggaccc 30581515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 54967051 - 54967105
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  |||||||||| ||| ||||||| |||||||||||||||||    
T  54967051 cctcttgtgtaaaaaacagggtaaggttgc-tacaatataccaaatggtgggaccc 54967105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 43685 - 43742
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43685 acagcgtcttgtgtaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccc 43742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 24881 - 24822
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  24881 acagcctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaaatggtgggaccc 24822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 24950 - 24905
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  24950 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 24905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 46861 - 46916
Alignment:
Q  112 cctcttgtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||| |  |||||||| |||||||||||||||||||||||||||||    
T  46861 cctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccc 46916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 43750 - 43793
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||| | | ||||||||    
T  43750 ggaccctgcatatgcgggagctctagtgcactgagttgcccttt 43793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 46923 - 46966
Alignment:
Q  160 ggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  46923 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 46966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 11157 - 11265
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg------------ggaccctgcatatgcgggagctctagtgcaccgggc 195  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||||            |||||||||||||||||||||||||||||||| ||     
T  11157 acagcctcttgtgtaaaacaaagtaaggctgcttacaatacaccaaatggtgggacaccttcccggaccctgcatatgcgggagctctagtgcaccaggt 11256  T
Q  196 tgcccttta 204  Q
    |||||||||    
T  11257 tgcccttta 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 10157 - 10100
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  10157 acagcctcttgtgtaaaacagagtaagactgcgtacaatacaccaaatagtgggaccc 10100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 20485 - 20428
Alignment:
Q  108 acagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  20485 acagcctcttgtgtaaaacagagtaagactgcgtacaatacaccaaatagtgggaccc 20428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 10226 - 10186
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgac 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 20554 - 20514
Alignment:
Q  69 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgac 20514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 8898 - 8942
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||    
T  8898 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgac 8942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 19226 - 19270
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||    
T  19226 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgac 19270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 35110 - 35066
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35110 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 35066  T

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Target: scaffold1176 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 1690 - 1637
Alignment:
Q  112 cctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  1690 cctcttgtgtaaaacaggataaggctgcatacaatacaccaaatgatgggaccc 1637  T

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Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 13132 - 13074
Alignment:
Q  108 acagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||| |||||| || ||||||||||||||||||||||| |||||||||||||    
T  13132 acagcctcttgcgtaaaaacaaggtaaggctgcgtacaatacaccgaatggtgggaccc 13074  T

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Target: scaffold0258; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 13202 - 13161
Alignment:
Q  68 ggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 13161  T

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Target: scaffold0258; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 17549 - 17505
Alignment:
Q  67 aggggtaaccttgtcgcaactggtaaagttgttgtcatgtgacag 111  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||    
T  17549 aggggtaaccttaacgcaactgctaaagttgttgtcatgtgacag 17505  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 24220 - 24133
Alignment:
Q  128 gggtaaggctgcgtacaatacaccaaatggtggg------------accctgcatatgcgggagctctagtgcaccgggctgcccttt 203  Q
    ||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||  ||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgcccttt 24133  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 83827 - 83872
Alignment:
Q  64 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  83827 atgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgac 83872  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 10840 - 10895
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  10840 cctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaatggtgggaccc 10895  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 226588 - 226544
Alignment:
Q  65 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 109  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgac 226544  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 226498 - 226456
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 164  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  226498 aaaacagggtaaggctgcatacaatacatcaaatggtgggacc 226456  T

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Target: scaffold0867 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 3770 - 3718
Alignment:
Q  115 cttgtgtaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccct 166  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||||||||||    
T  3770 cttgtgtaaatacaaggtaacgttgcgtacaatacaccaaatggtgggaccct 3718  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 59003 - 59064
Alignment:
Q  108 acagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccc 165  Q
    |||||||||||| |||||  ||||||||| ||||||||||||||||  ||||||||||||||    
T  59003 acagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccc 59064  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 73034 - 73001
Alignment:
Q  74 accttgtcgcaactggtaaagttgttgtcatgtg 107  Q
    |||||| |||||||||||||||||||||||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtg 73001  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 72960 - 72924
Alignment:
Q  122 aaaacagggtaaggctgcgtacaatacaccaaatggt 158  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  72960 aaaacacggtaaggctgcctacaatacaccaaatggt 72924  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 23629 - 23684
Alignment:
Q  112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccc 165  Q
    ||||||||||||||  |||||| ||||||||||||||  | |||||||||||||||    
T  23629 cctcttgtgtaaaaaacagggtgaggctgcgtacaatgtagcaaatggtgggaccc 23684  T

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