View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15031_low_1 (Length: 453)

Name: NF15031_low_1
Description: NF15031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15031_low_1
NF15031_low_1
[»] chr4 (30 HSPs)
chr4 (4-228)||(44524941-44525168)
chr4 (360-438)||(44523395-44523473)
chr4 (356-440)||(22608848-22608932)
chr4 (361-432)||(41487591-41487662)
chr4 (267-316)||(16207299-16207348)
chr4 (368-440)||(24390804-24390876)
chr4 (361-432)||(48801143-48801214)
chr4 (356-434)||(16711885-16711963)
chr4 (266-316)||(35187334-35187384)
chr4 (369-438)||(8946286-8946355)
chr4 (267-316)||(27993626-27993675)
chr4 (356-432)||(7363442-7363518)
chr4 (356-432)||(20039561-20039637)
chr4 (360-432)||(48089720-48089792)
chr4 (361-432)||(10010774-10010845)
chr4 (361-432)||(10017915-10017986)
chr4 (361-432)||(37010913-37010984)
chr4 (361-432)||(38307979-38308050)
chr4 (353-432)||(40412728-40412807)
chr4 (361-432)||(40730344-40730415)
chr4 (361-432)||(47691725-47691796)
chr4 (361-432)||(52225573-52225644)
chr4 (267-316)||(31835468-31835517)
chr4 (353-434)||(41324318-41324399)
chr4 (368-432)||(8672893-8672957)
chr4 (361-432)||(14599129-14599200)
chr4 (353-432)||(23106289-23106368)
chr4 (361-432)||(48826147-48826218)
chr4 (228-261)||(44523580-44523613)
chr4 (356-432)||(9627628-9627704)
[»] chr7 (20 HSPs)
chr7 (379-438)||(25076873-25076932)
chr7 (361-432)||(31673685-31673756)
chr7 (356-432)||(32670253-32670329)
chr7 (368-432)||(36820837-36820901)
chr7 (361-432)||(2732437-2732508)
chr7 (361-432)||(11410668-11410739)
chr7 (361-432)||(41892270-41892341)
chr7 (361-432)||(1411428-1411499)
chr7 (361-432)||(14776111-14776182)
chr7 (369-440)||(29977099-29977170)
chr7 (379-430)||(31249307-31249358)
chr7 (361-432)||(37807105-37807176)
chr7 (361-432)||(41399639-41399710)
chr7 (360-422)||(34736788-34736850)
chr7 (361-414)||(31377512-31377565)
chr7 (361-406)||(35516435-35516480)
chr7 (361-432)||(12077295-12077366)
chr7 (370-438)||(28452536-28452604)
chr7 (386-438)||(44980560-44980612)
chr7 (361-432)||(48214210-48214281)
[»] chr6 (17 HSPs)
chr6 (361-432)||(14610553-14610624)
chr6 (361-432)||(3027190-3027261)
chr6 (361-432)||(3728958-3729029)
chr6 (361-432)||(4111290-4111361)
chr6 (361-432)||(5153463-5153534)
chr6 (361-432)||(24012051-24012122)
chr6 (361-432)||(27613422-27613493)
chr6 (356-430)||(8437497-8437571)
chr6 (271-316)||(29968422-29968467)
chr6 (368-432)||(1449762-1449826)
chr6 (368-440)||(9283808-9283880)
chr6 (364-432)||(24849022-24849090)
chr6 (361-432)||(12296830-12296901)
chr6 (361-432)||(13276707-13276778)
chr6 (361-432)||(23645948-23646019)
chr6 (361-432)||(28890814-28890885)
chr6 (361-432)||(31803022-31803093)
[»] chr5 (9 HSPs)
chr5 (353-431)||(42288414-42288492)
chr5 (361-432)||(4049347-4049418)
chr5 (361-432)||(7079115-7079186)
chr5 (361-432)||(7035287-7035358)
chr5 (369-440)||(24510207-24510278)
chr5 (361-432)||(31271339-31271410)
chr5 (361-432)||(32298552-32298623)
chr5 (361-432)||(491376-491447)
chr5 (361-432)||(42062212-42062283)
[»] chr8 (13 HSPs)
chr8 (361-430)||(12939310-12939379)
chr8 (361-432)||(12615262-12615333)
chr8 (361-432)||(23950413-23950484)
chr8 (361-432)||(32415292-32415363)
chr8 (267-316)||(8643257-8643306)
chr8 (361-432)||(32551501-32551572)
chr8 (361-432)||(36054549-36054620)
chr8 (361-432)||(36684819-36684890)
chr8 (388-438)||(7681759-7681809)
chr8 (388-432)||(35737023-35737067)
chr8 (361-432)||(11989176-11989247)
chr8 (370-430)||(40050964-40051023)
chr8 (370-430)||(40051081-40051140)
[»] chr3 (30 HSPs)
chr3 (267-316)||(47278051-47278100)
chr3 (361-432)||(34422574-34422645)
chr3 (361-432)||(53002288-53002359)
chr3 (361-434)||(25536983-25537056)
chr3 (361-434)||(39171346-39171419)
chr3 (361-434)||(40488951-40489024)
chr3 (361-432)||(19421087-19421158)
chr3 (369-432)||(20647703-20647766)
chr3 (361-432)||(29076989-29077060)
chr3 (361-432)||(33370535-33370606)
chr3 (361-432)||(34636462-34636533)
chr3 (361-432)||(46068133-46068204)
chr3 (361-432)||(47844647-47844718)
chr3 (361-432)||(54650588-54650659)
chr3 (360-430)||(39391196-39391266)
chr3 (369-434)||(41873537-41873602)
chr3 (361-441)||(2222003-2222083)
chr3 (356-432)||(46116559-46116635)
chr3 (361-432)||(1782592-1782663)
chr3 (361-432)||(13596281-13596352)
chr3 (361-432)||(24540911-24540982)
chr3 (361-432)||(28793795-28793866)
chr3 (361-432)||(33069342-33069413)
chr3 (361-432)||(33249559-33249630)
chr3 (361-432)||(40000441-40000512)
chr3 (361-432)||(40000687-40000758)
chr3 (361-432)||(52174713-52174784)
chr3 (361-432)||(55008238-55008309)
chr3 (266-316)||(8541385-8541435)
chr3 (364-406)||(28125886-28125928)
[»] chr2 (13 HSPs)
chr2 (361-432)||(29557562-29557633)
chr2 (361-432)||(43616429-43616500)
chr2 (356-432)||(34726231-34726307)
chr2 (361-436)||(18075683-18075758)
chr2 (368-432)||(21198042-21198106)
chr2 (360-432)||(32084047-32084119)
chr2 (356-432)||(38213538-38213614)
chr2 (368-432)||(39133387-39133451)
chr2 (361-432)||(12033731-12033802)
chr2 (361-432)||(13029034-13029105)
chr2 (356-431)||(43999562-43999637)
chr2 (267-316)||(7497330-7497377)
chr2 (361-425)||(5936706-5936770)
[»] scaffold1625 (1 HSPs)
scaffold1625 (361-434)||(1336-1409)
[»] chr1 (18 HSPs)
chr1 (356-432)||(6889415-6889491)
chr1 (356-432)||(6891261-6891337)
chr1 (361-432)||(3831617-3831688)
chr1 (361-432)||(7109511-7109582)
chr1 (361-432)||(13253390-13253461)
chr1 (361-432)||(18353218-18353289)
chr1 (361-432)||(39860368-39860439)
chr1 (361-432)||(45372690-45372761)
chr1 (370-431)||(6888905-6888966)
chr1 (363-432)||(24038373-24038442)
chr1 (267-316)||(25160458-25160507)
chr1 (369-434)||(32239215-32239280)
chr1 (368-432)||(34084101-34084165)
chr1 (361-432)||(8417374-8417445)
chr1 (361-432)||(17805955-17806026)
chr1 (361-432)||(46846905-46846976)
chr1 (361-432)||(52222872-52222943)
chr1 (385-438)||(31502265-31502318)
[»] scaffold0259 (1 HSPs)
scaffold0259 (353-432)||(24916-24995)
[»] scaffold0217 (1 HSPs)
scaffold0217 (361-432)||(15714-15785)
[»] scaffold0129 (1 HSPs)
scaffold0129 (361-432)||(41047-41117)
[»] scaffold0037 (1 HSPs)
scaffold0037 (361-432)||(81246-81317)
[»] scaffold0648 (1 HSPs)
scaffold0648 (267-316)||(4376-4425)
[»] scaffold0274 (1 HSPs)
scaffold0274 (267-316)||(3846-3895)
[»] scaffold0065 (1 HSPs)
scaffold0065 (368-432)||(40129-40193)
[»] scaffold0005 (1 HSPs)
scaffold0005 (361-432)||(218178-218249)
[»] scaffold0067 (1 HSPs)
scaffold0067 (353-431)||(14247-14325)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 44525168 - 44524941
Alignment:
Q  4 agagaaaagaaggtggaagctggaccatttgcctttaaggccttgccagcagtcgcacatgcgtgccacttatgtagagatagtagatatcatactattg 103  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  44525168 agagaagagaaggtggaagctggaccatttgcctttaaggccttgccagcagtcgcacatgcgtgccacttatgtagggatagtagatatcatgctattg 44525069  T
Q  104 cggatacgatatctcaaccggtttgagtttaaatttaaatatatttgtgattctgaattcatatac---taaacgaataactaaatattaatctaatgac 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    ||| ||||   |||||||||||||||||||    
T  44525068 cggatacgatatctcaaccggtttgagtttaaatttaaatagattagtgattctgaattcatacacgcacaaatgaatgtgtaaatattaatctaatgac 44524969  T
Q  201 taatttatgttcttaaaaaatttaaata 228  Q
    |||||||||||||||||||| |||||||    
T  44524968 taatttatgttcttaaaaaaattaaata 44524941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 44523473 - 44523395
Alignment:
Q  360 tctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  44523473 tctgaaaacctatttggaggcctacttcatattaaagttattaaatagttcattttatctacttttaaataggttaaat 44523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 440
Target Start/End: Original strand, 22608848 - 22608932
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaattg 440  Q
    |||| |||||||||||||| || |||||||||||||| ||||| || |||||| ||||||||||||||||||||| | |||||||    
T  22608848 ctgacctgaaaacctatttacaagcctacttcatattgaagtccttaaataatccattttatctacttttaaatatgctaaattg 22608932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 41487591 - 41487662
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||||| || | |||||||||||||||||||||||||    
T  41487591 ctgaaagcctatttacaggcctacttactattaaagtcattaaacatttcattttatctacttttaaatagg 41487662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 16207348 - 16207299
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  16207348 tggcggatcttgatatcatttttcggaggtgtcaaatatttgtggaatat 16207299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 24390876 - 24390804
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaattg 440  Q
    ||||||| || |||||||  |||||||||||||| |||| || ||||| ||||||||||||||||||||||||    
T  24390876 cctatttacatgcctactatatattaaagtcattaaatatttaattttgtctacttttaaataggttaaattg 24390804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 48801214 - 48801143
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  48801214 ctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 48801143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 16711885 - 16711963
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||| |||||||||||||| |||||||||||  ||||||||||| | || | | |||||||| ||||||||||||||||    
T  16711885 ctgacctgaaaacctatttacaggcctacttactattaaagtcactaaacattccattttatatacttttaaataggtt 16711963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 35187334 - 35187384
Alignment:
Q  266 atggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  35187334 atggcggatcttgataccatttctcgggggtgccaaatatttatggaatat 35187384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 8946355 - 8946286
Alignment:
Q  369 ctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    |||||| |||||||||||||||||||||||||| | || | ||||||||||| || |||||||| |||||    
T  8946355 ctatttacaggcctacttcatattaaagtcattaattagtccattttatctatttataaataggctaaat 8946286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 27993626 - 27993675
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  27993626 tggcggatcttgatatcattttttgggggtgccaaatatttgtggaatat 27993675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 7363518 - 7363442
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  7363518 ctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 7363442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 20039637 - 20039561
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  20039637 ctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 20039561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 48089792 - 48089720
Alignment:
Q  360 tctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  48089792 tctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 48089720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 10010845 - 10010774
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  10010845 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 10010774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 10017986 - 10017915
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  10017986 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 10017915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 37010984 - 37010913
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  37010984 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 37010913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 38308050 - 38307979
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  38308050 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 38307979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 432
Target Start/End: Complemental strand, 40412807 - 40412728
Alignment:
Q  353 ggtctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||||||||||| ||||||| |||||||||||  ||||||||||| | |||| | |||||||||   |||||||||||    
T  40412807 ggtctgatctgaaagcctatttacaggcctacttactattaaagtcactaaatattccattttatcagtttttaaatagg 40412728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 40730415 - 40730344
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  40730415 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 40730344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 47691725 - 47691796
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  47691725 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 47691796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 52225644 - 52225573
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | ||||||||||||| |||||||||||    
T  52225644 ctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctatttttaaatagg 52225573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 31835468 - 31835517
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  31835468 tggcggatcttgatatcatttctcgggggtgccaaataattgtggaatat 31835517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 434
Target Start/End: Complemental strand, 41324399 - 41324318
Alignment:
Q  353 ggtctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    ||||||| |||||| ||||||| |||| ||||||  ||||||||||| | || | | ||||||||||| |||||||||||||    
T  41324399 ggtctgacctgaaagcctatttacagggctacttactattaaagtcactaaacattccattttatctatttttaaataggtt 41324318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 8672893 - 8672957
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  8672893 cctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 8672957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 14599129 - 14599200
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| ||||| || ||  ||||||||||| | || | |||||||||||||||||||||||||    
T  14599129 ctgaaagcctatttacaggcttatttactattaaagtcactaaacatttcattttatctacttttaaatagg 14599200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 432
Target Start/End: Complemental strand, 23106368 - 23106289
Alignment:
Q  353 ggtctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||| ||||||| || || |||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  23106368 ggtctgacctgaaagcctatttacaagcttacttactattaaagtcactaaacattccattttatctacttttaaatagg 23106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 48826147 - 48826218
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| |||||||  ||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  48826147 ctgaaagcctatttataggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 48826218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 44523613 - 44523580
Alignment:
Q  228 agttattgttgtgaacattattcattaggtctag 261  Q
    ||||||||||||||||||||||||||||| ||||    
T  44523613 agttattgttgtgaacattattcattaggcctag 44523580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 9627628 - 9627704
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| |||||||  |||||| |||  ||||||||||| | || | | |||||||||||||||||||||||    
T  9627628 ctgacctgaaagcctatttataggccttcttactattaaagtcactaaacattccattttatctacttttaaatagg 9627704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 438
Target Start/End: Complemental strand, 25076932 - 25076873
Alignment:
Q  379 gcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25076932 gcctaatttatattaaagtcattaaataattcattttatctacttttaaatagattaaat 25076873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 31673685 - 31673756
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||||||||||| |||||||||||  ||||||||||||| || | | |||||||||||||||| ||||||    
T  31673685 ctgaaaacctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttgaatagg 31673756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 32670329 - 32670253
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| ||||| ||||| |||||||||||| | || | || ||||||||||||||||||||||    
T  32670329 ctgacctgaaagcctatttacaggcatacttaatattaaagtcactaaacattttattttatctacttttaaatagg 32670253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 36820901 - 36820837
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  36820901 cctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaatagg 36820837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 2732437 - 2732508
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  2732437 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 2732508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 11410668 - 11410739
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  11410668 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 11410739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 41892270 - 41892341
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| |||||||||||||||||||  ||||||||||| | || | |  ||||||||||||||||||||||    
T  41892270 ctgaaagcctatttgcaggcctacttactattaaagtcactaaacattctattttatctacttttaaatagg 41892341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 1411499 - 1411428
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  1411499 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 1411428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 14776182 - 14776111
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |  ||||||||||||||||||||||    
T  14776182 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaatagg 14776111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 440
Target Start/End: Complemental strand, 29977170 - 29977099
Alignment:
Q  369 ctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaattg 440  Q
    |||||| ||||| | | ||| |||||||||||| |||| ||||||||||||| ||||||||||  |||||||    
T  29977170 ctatttacaggcatgcatcaaattaaagtcattaaatagttcattttatctatttttaaatagactaaattg 29977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 31249358 - 31249307
Alignment:
Q  379 gcctacttcatattaaagtcattcaataattcattttatctacttttaaata 430  Q
    |||||||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  31249358 gcctactttaaattaaagtcattaaatagttcattttatatacttttaaata 31249307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 37807105 - 37807176
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||| ||||||||||||||    
T  37807105 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatttacttttaaatagg 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 41399710 - 41399639
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  41399710 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 41399639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 34736788 - 34736850
Alignment:
Q  360 tctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctact 422  Q
    |||||||| |||||| ||  |||| |||||||||||| |||| |||| |||||||||||||||    
T  34736788 tctgaaaatctatttacatacctatttcatattaaagacattaaatagttcattttatctact 34736850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 31377512 - 31377565
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattt 414  Q
    |||||| ||||||| ||||||||||||||||||| |||||  |||| |||||||    
T  31377512 ctgaaagcctatttacaggcctacttcatattaaggtcatcaaatagttcattt 31377565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 35516480 - 35516435
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaata 406  Q
    |||||| ||||||| ||||||||||| |||||||||||||| ||||    
T  35516480 ctgaaagcctatttacaggcctactttatattaaagtcattaaata 35516435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 12077295 - 12077366
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattc-attttatctacttttaaatagg 432  Q
    |||||| ||||| | |||||||||||  ||||||||||| | ||| |||| ||||||||||||||||||||||    
T  12077295 ctgaaagcctatgtacaggcctacttattattaaagtcact-aatcattccattttatctacttttaaatagg 12077366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 438
Target Start/End: Original strand, 28452536 - 28452604
Alignment:
Q  370 tatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    |||||||| | ||||||||||||||| |  || |||| | ||||||||||| ||||||||| |||||||    
T  28452536 tatttgcaagtctacttcatattaaatttgttaaatagtccattttatctatttttaaataagttaaat 28452604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 44980612 - 44980560
Alignment:
Q  386 tcatattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    ||||||||||||||||  ||| | |||||||||||||| |||||||| |||||    
T  44980612 tcatattaaagtcattacatagtccattttatctacttctaaataggctaaat 44980560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 48214210 - 48214281
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattc-attttatctacttttaaatagg 432  Q
    |||||| ||||||| ||||||| |||  ||||||||||| | ||| |||| ||||||||||||||||||||||    
T  48214210 ctgaaatcctatttacaggcctgcttactattaaagtcact-aatcattccattttatctacttttaaatagg 48214281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 14610624 - 14610553
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||||||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  14610624 ctgaaaacctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 14610553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 3027261 - 3027190
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  3027261 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 3027190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 3729029 - 3728958
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| ||| |||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  3729029 ctgaaagcctatttacagacctacttactattaaagtcattaaacattccattttatctacttttaaatagg 3728958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 4111361 - 4111290
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  4111361 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 4111290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 5153463 - 5153534
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  5153463 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 5153534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 24012051 - 24012122
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  24012051 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 24012122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 27613422 - 27613493
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  27613422 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 27613493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 430
Target Start/End: Complemental strand, 8437571 - 8437497
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaata 430  Q
    |||| |||||| ||||||| |||| ||||||  ||||||||||| | || | |||||||||||||||||||||||    
T  8437571 ctgacctgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaata 8437497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 29968422 - 29968467
Alignment:
Q  271 ggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||    
T  29968422 ggatcttgatatcatttttcgggggtgtcaaatatttgtggaatat 29968467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 1449826 - 1449762
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  1449826 cctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 1449762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 9283880 - 9283808
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaattg 440  Q
    ||||||| |||||||| ||||||||||||||||| |||| |  ||||| |||| ||||||||| || ||||||    
T  9283880 cctatttacaggcctatttcatattaaagtcattaaatattcaattttgtctaattttaaatatgtcaaattg 9283808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 24849022 - 24849090
Alignment:
Q  364 aaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||||||| |||||||||||  ||||||||||| | || | |  ||||||||||||||||||||||    
T  24849022 aaaacctatttacaggcctacttactattaaagtcactaaacattcaattttatctacttttaaatagg 24849090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 12296901 - 12296830
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||| ||  ||||||||||| | || | | |||||||||||||||||||||||    
T  12296901 ctgaaagcctatttacaggcctaattactattaaagtcactaaacattccattttatctacttttaaatagg 12296830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 13276707 - 13276778
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  13276707 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 13276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 23645948 - 23646019
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| | ||||| ||||| |||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  23645948 ctgaaagcgtatttacaggcttacttactattaaagtcattaaacattccattttatctacttttaaatagg 23646019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 28890885 - 28890814
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  28890885 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 28890814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 31803093 - 31803022
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||| ||||||||||||||    
T  31803093 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatatacttttaaatagg 31803022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 42288492 - 42288414
Alignment:
Q  353 ggtctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatag 431  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||| | || | | ||||||||||||||||||||||    
T  42288492 ggtctggtctgaaaacctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatag 42288414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 4049418 - 4049347
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  4049418 ctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaatagg 4049347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 7079115 - 7079186
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  7079115 ctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 7079186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 7035287 - 7035358
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  7035287 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 7035358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 24510207 - 24510278
Alignment:
Q  369 ctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaattg 440  Q
    |||||| ||||||||||| |||||||||||||| |||| |  ||||| ||||||| |||||||| |||||||    
T  24510207 ctatttacaggcctacttgatattaaagtcattaaatattcaattttgtctacttctaaataggctaaattg 24510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 31271410 - 31271339
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  31271410 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 31271339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 32298623 - 32298552
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  32298623 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 32298552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 491376 - 491447
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||  | || | | |||||||||||||||||||||||    
T  491376 ctgaaagcctatttacaggcctacttactattaaagtcgctaaacattccattttatctacttttaaatagg 491447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 42062283 - 42062212
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||  | || | | |||||||||||||||||||||||    
T  42062283 ctgaaagcctatttacaggcctacttactattaaagtcgctaaacattccattttatctacttttaaatagg 42062212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 12939310 - 12939379
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaata 430  Q
    |||||||||||| | ||  ||||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  12939310 ctgaaaacctatatacaaacctacttcacattaaagtcattaaataattcattttatctacttctaaata 12939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 12615262 - 12615333
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  12615262 ctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaatagg 12615333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 23950413 - 23950484
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  23950413 ctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 23950484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 32415363 - 32415292
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | |||| | |||||||||||||||||||||||    
T  32415363 ctgaaagcctatttacaggcctacttactattaaagtcactaaatattccattttatctacttttaaatagg 32415292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 8643257 - 8643306
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  8643257 tggcggatcttgatatcattttttggaggtgccaaatatttgtcgaatat 8643306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 32551572 - 32551501
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  32551572 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 32551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 36054620 - 36054549
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  36054620 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 36054549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 36684819 - 36684890
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  36684819 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 36684890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 7681809 - 7681759
Alignment:
Q  388 atattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    |||||||||||||| ||||||||||||||| || ||||||||||| |||||    
T  7681809 atattaaagtcattaaataattcattttatttatttttaaataggctaaat 7681759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 35737067 - 35737023
Alignment:
Q  388 atattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||    
T  35737067 atattaaagtcattaaatagttcattttatctatttttaaatagg 35737023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 11989176 - 11989247
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||   |||||||||| | || | | |||||||||||||||||||||||    
T  11989176 ctgaaagcctatttacaggcctacttaccattaaagtcactaaacattccattttatctacttttaaatagg 11989247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 40050964 - 40051023
Alignment:
Q  370 tatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaata 430  Q
    ||||| ||| |||| |||||||| || ||||| |||| |||||||||||||||||||||||    
T  40050964 tatttacagacctatttcatatttaa-tcattaaatagttcattttatctacttttaaata 40051023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 40051081 - 40051140
Alignment:
Q  370 tatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaata 430  Q
    ||||| ||| |||| |||||||| || ||||| |||| |||||||||||||||||||||||    
T  40051081 tatttacagacctatttcatatttaa-tcattaaatagttcattttatctacttttaaata 40051140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 47278051 - 47278100
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  47278051 tggcggatcttgataccatttctcgggggtgccaaatatttgtggaatat 47278100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 34422645 - 34422574
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  34422645 ctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaatagg 34422574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 53002288 - 53002359
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| || ||||||||  ||||||||||| | |||| |||||||||||||||||||||||||    
T  53002288 ctgaaagcctatttacatgcctacttactattaaagtcactaaatatttcattttatctacttttaaatagg 53002359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 25536983 - 25537056
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||||    
T  25536983 ctgaaagcctatttacaggcctacttattattaaagtcactaaacattccattttatctacttttaaataggtt 25537056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 39171419 - 39171346
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||||    
T  39171419 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtt 39171346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 40489024 - 40488951
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||||    
T  40489024 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtt 40488951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 19421087 - 19421158
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  19421087 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 19421158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 20647766 - 20647703
Alignment:
Q  369 ctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| |||||||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  20647766 ctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaatagg 20647703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 29076989 - 29077060
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  29076989 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 29077060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 33370535 - 33370606
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| ||| |||||||  ||||||||||||| || | | |||||||||||||||||||||||    
T  33370535 ctgaaagcctatttacagacctacttactattaaagtcattaaacattccattttatctacttttaaatagg 33370606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 34636462 - 34636533
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||||  || | | |||||||||||||||||||||||    
T  34636462 ctgaaagcctatttacaggcctacttactattaaagtcatcaaacattccattttatctacttttaaatagg 34636533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 46068133 - 46068204
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  46068133 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 46068204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 47844647 - 47844718
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  47844647 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 47844718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 54650588 - 54650659
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  54650588 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 54650659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 39391196 - 39391266
Alignment:
Q  360 tctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaata 430  Q
    ||||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||    
T  39391196 tctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 39391266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 434
Target Start/End: Original strand, 41873537 - 41873602
Alignment:
Q  369 ctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||||    
T  41873537 ctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtt 41873602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 441
Target Start/End: Complemental strand, 2222083 - 2222003
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaaattga 441  Q
    |||||| |||| ||||| ||||| || |||||||||||||| |||| |  ||||||| || ||||||||||| ||||||||    
T  2222083 ctgaaagcctacttgcatgcctattttatattaaagtcattaaatactcaattttatttatttttaaataggctaaattga 2222003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 46116559 - 46116635
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| ||  |||||||  ||||||||||||| || | |||||||||||||||| ||||||||    
T  46116559 ctgacctgaaagcctatttacatacctacttattattaaagtcattaaacatttcattttatctacttctaaatagg 46116635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 1782663 - 1782592
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  1782663 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 1782592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 13596281 - 13596352
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||| | | || | | |||||||||||||||||||||||    
T  13596281 ctgaaagcctatttacaggcctacttactattaaagttactaaacattccattttatctacttttaaatagg 13596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 24540982 - 24540911
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||  |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  24540982 ctgaaagcctattcacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 24540911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 28793795 - 28793866
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| |||||||  ||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  28793795 ctgaaagcctatttataggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 28793866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 33069413 - 33069342
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| ||||||| |||  ||||||||||| | || | | |||||||||||||||||||||||    
T  33069413 ctgaaagcctatttacaggcctccttactattaaagtcactaaacattccattttatctacttttaaatagg 33069342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 33249559 - 33249630
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  33249559 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 33249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 40000512 - 40000441
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |  ||||||||||||||||||||||    
T  40000512 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaatagg 40000441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 40000758 - 40000687
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |  ||||||||||||||||||||||    
T  40000758 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaatagg 40000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 52174784 - 52174713
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  52174784 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 52174713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 55008238 - 55008309
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |  ||||||||||||||||||||||    
T  55008238 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaatagg 55008309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 8541435 - 8541385
Alignment:
Q  266 atggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    |||||||||||||||| ||||| | || ||| |||||||||||||||||||    
T  8541435 atggcggatcttgatatcatttctagggggtaccaaatatttgtggaatat 8541385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 28125886 - 28125928
Alignment:
Q  364 aaaacctatttgcaggcctacttcatattaaagtcattcaata 406  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||    
T  28125886 aaaacctatttacaggtctacttcatattaaagtcattaaata 28125928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 29557562 - 29557633
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  29557562 ctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 29557633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 43616429 - 43616500
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  43616429 ctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 43616500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 34726307 - 34726231
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  34726307 ctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 34726231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 18075758 - 18075683
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggttaa 436  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||| ||||    
T  18075758 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagcttaa 18075683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 21198106 - 21198042
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  21198106 cctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 21198042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 32084119 - 32084047
Alignment:
Q  360 tctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| ||||||| |||| ||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  32084119 tctgaaagcctatttacaggtctacttactattaaagtcactaaacattccattttatctacttttaaatagg 32084047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 38213538 - 38213614
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| |||| ||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  38213538 ctgacctgaaagcctatttacaggtctacttactattaaagtcactaaacattccattttatctacttttaaatagg 38213614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 39133387 - 39133451
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  39133387 cctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 39133451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 12033802 - 12033731
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  12033802 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 12033731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 13029105 - 13029034
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||| ||||||| | || | | |||||||||||||||||||||||    
T  13029105 ctgaaagcctatttacaggcctacttactatcaaagtcactaaacattccattttatctacttttaaatagg 13029034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 43999637 - 43999562
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatag 431  Q
    |||| |||||| ||||||| |||||||||||  ||||||| ||| | || | | ||||||||||||||||||||||    
T  43999637 ctgacctgaaagcctatttacaggcctacttgctattaaaatcactaaacattccattttatctacttttaaatag 43999562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 7497377 - 7497330
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  7497377 tggcggatcttgataccattct-cgg-ggtgccaaatatttgtggaatat 7497330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 5936770 - 5936706
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctactttt 425  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||||||||||||    
T  5936770 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 5936706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 1336 - 1409
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||||    
T  1336 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtt 1409  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 6889491 - 6889415
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  6889491 ctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 6889415  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 6891337 - 6891261
Alignment:
Q  356 ctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  6891337 ctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 6891261  T

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Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 3831617 - 3831688
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  3831617 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 3831688  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 7109582 - 7109511
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  7109582 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 7109511  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 13253390 - 13253461
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  13253390 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 13253461  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 18353218 - 18353289
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  18353218 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 18353289  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 39860439 - 39860368
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  39860439 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 39860368  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 45372761 - 45372690
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  45372761 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 45372690  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 6888966 - 6888905
Alignment:
Q  370 tatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatag 431  Q
    ||||| |||||||||||  ||||||||||| | || | ||||||||||||||||||||||||    
T  6888966 tatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatag 6888905  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 24038373 - 24038442
Alignment:
Q  363 gaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  24038373 gaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 24038442  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 25160458 - 25160507
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  25160458 tggcggatcttgatatcatttcacgggggtgccaaatatttgtggaatat 25160507  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 32239280 - 32239215
Alignment:
Q  369 ctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaataggtt 434  Q
    |||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||||    
T  32239280 ctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtt 32239215  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 34084101 - 34084165
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  34084101 cctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 34084165  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 8417374 - 8417445
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  8417374 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 8417445  T

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Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 17805955 - 17806026
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  17805955 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 17806026  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 46846905 - 46846976
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  46846905 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 46846976  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 52222872 - 52222943
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | ||||||| |||||||||||||||    
T  52222872 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaatagg 52222943  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 31502318 - 31502265
Alignment:
Q  385 ttcatattaaagtcattcaataattcattttatctacttttaaataggttaaat 438  Q
    ||||||||||||||||| |||| |  ||||||| |||||||||||||| |||||    
T  31502318 ttcatattaaagtcattaaatactcaattttatttacttttaaataggctaaat 31502265  T

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Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 432
Target Start/End: Original strand, 24916 - 24995
Alignment:
Q  353 ggtctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||| ||||||| |||||||||||  |||||||| || | || | | |||||||||||||||||||||||    
T  24916 ggtctgacctgaaagcctatttacaggcctacttactattaaagccactaaacattccattttatctacttttaaatagg 24995  T

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Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 15714 - 15785
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  15714 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 15785  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 41047 - 41117
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | |||||||||||||||||||||||||    
T  41047 ctgaaagcctatttacaggcctacttactattaaagtcactaaaca-ttcattttatctacttttaaatagg 41117  T

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Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 81317 - 81246
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  81317 ctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 81246  T

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Target: scaffold0648 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 4376 - 4425
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  4376 tggcggatcttgatatcatttctcgggggtgccaaataattgtggaatat 4425  T

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Target: scaffold0274 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 3846 - 3895
Alignment:
Q  267 tggcggatcttgataccatttttcggaggtgccaaatatttgtggaatat 316  Q
    ||||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  3846 tggcggatcttgatatcatttctcgggggtgccaaataattgtggaatat 3895  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 40129 - 40193
Alignment:
Q  368 cctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    ||||||| |||||||||||  ||||||||||| | || | | |||||||||||||||||||||||    
T  40129 cctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 40193  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 218249 - 218178
Alignment:
Q  361 ctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatagg 432  Q
    |||||| ||||||| ||||| || ||  ||||||||||| | || | |||||||||||||||||||||||||    
T  218249 ctgaaagcctatttacaggcttatttactattaaagtcactaaacatttcattttatctacttttaaatagg 218178  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 14325 - 14247
Alignment:
Q  353 ggtctgatctgaaaacctatttgcaggcctacttcatattaaagtcattcaataattcattttatctacttttaaatag 431  Q
    ||||||| |||||| |||| || |||||||||||  ||||||||||  | || | | ||||||||||||||||||||||    
T  14325 ggtctgacctgaaagcctaattacaggcctacttactattaaagtctctaaacattccattttatctacttttaaatag 14247  T

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