View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15032_low_6 (Length: 239)

Name: NF15032_low_6
Description: NF15032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15032_low_6
NF15032_low_6
[»] chr4 (14 HSPs)
chr4 (24-157)||(55620191-55620333)
chr4 (24-157)||(55627495-55627637)
chr4 (50-126)||(1113234-1113311)
chr4 (26-126)||(24039250-24039351)
chr4 (50-124)||(17254714-17254789)
chr4 (64-126)||(51399254-51399317)
chr4 (50-126)||(1113443-1113520)
chr4 (50-126)||(8607800-8607877)
chr4 (50-126)||(24039515-24039592)
chr4 (50-126)||(29430171-29430248)
chr4 (50-126)||(36215673-36215750)
chr4 (57-126)||(43099355-43099424)
chr4 (64-126)||(49905766-49905829)
chr4 (50-126)||(48018634-48018711)
[»] chr1 (23 HSPs)
chr1 (51-126)||(52285079-52285154)
chr1 (50-126)||(7714196-7714273)
chr1 (50-126)||(47422127-47422204)
chr1 (25-126)||(52285318-52285420)
chr1 (50-126)||(39277848-39277925)
chr1 (17-126)||(19920496-19920606)
chr1 (26-126)||(45823053-45823154)
chr1 (27-123)||(16959107-16959204)
chr1 (50-126)||(28990323-28990400)
chr1 (50-126)||(39277606-39277683)
chr1 (50-122)||(47421915-47421988)
chr1 (50-125)||(27334369-27334445)
chr1 (27-126)||(30050181-30050281)
chr1 (50-125)||(36077121-36077197)
chr1 (29-126)||(30049918-30050016)
chr1 (50-160)||(45822811-45822930)
chr1 (50-126)||(10394154-10394231)
chr1 (50-126)||(10394396-10394473)
chr1 (50-122)||(16958866-16958939)
chr1 (50-126)||(28990564-28990641)
chr1 (50-125)||(49186024-49186100)
chr1 (50-126)||(36076909-36076986)
chr1 (52-126)||(15158349-15158424)
[»] chr3 (13 HSPs)
chr3 (24-153)||(31071145-31071283)
chr3 (50-126)||(49220348-49220425)
chr3 (24-153)||(11047209-11047347)
chr3 (50-122)||(49220138-49220211)
chr3 (50-153)||(28253671-28253783)
chr3 (24-121)||(31070947-31071045)
chr3 (29-126)||(18733945-18734042)
chr3 (50-126)||(52857000-52857077)
chr3 (23-107)||(18734154-18734238)
chr3 (71-126)||(46453140-46453196)
chr3 (64-124)||(4953392-4953453)
chr3 (50-126)||(11046992-11047068)
chr3 (50-126)||(26988829-26988906)
[»] chr8 (12 HSPs)
chr8 (24-126)||(36194893-36194996)
chr8 (23-126)||(36194624-36194728)
chr8 (25-126)||(31933272-31933374)
chr8 (30-126)||(12654967-12655064)
chr8 (23-126)||(31933537-31933641)
chr8 (50-126)||(13557405-13557482)
chr8 (28-126)||(12654703-12654802)
chr8 (64-126)||(21015198-21015261)
chr8 (50-126)||(18847391-18847467)
chr8 (64-126)||(10134646-10134709)
chr8 (50-107)||(13557164-13557221)
chr8 (50-121)||(18847605-18847677)
[»] chr7 (16 HSPs)
chr7 (50-127)||(8462871-8462949)
chr7 (50-126)||(32871633-32871711)
chr7 (50-126)||(6000503-6000580)
chr7 (50-124)||(4133105-4133180)
chr7 (50-122)||(43392322-43392395)
chr7 (64-126)||(16962882-16962945)
chr7 (57-126)||(6000713-6000783)
chr7 (24-125)||(25731916-25732018)
chr7 (63-153)||(30284147-30284246)
chr7 (50-126)||(18417482-18417559)
chr7 (54-126)||(32389708-32389781)
chr7 (71-126)||(24846289-24846345)
chr7 (64-126)||(30283956-30284018)
chr7 (64-124)||(24485803-24485864)
chr7 (50-126)||(37691719-37691796)
chr7 (63-126)||(472635-472699)
[»] chr2 (8 HSPs)
chr2 (168-224)||(14949331-14949387)
chr2 (50-127)||(12701951-12702029)
chr2 (50-122)||(12702196-12702269)
chr2 (50-124)||(12261092-12261167)
chr2 (50-126)||(2217873-2217950)
chr2 (24-122)||(21304326-21304425)
chr2 (64-126)||(25945864-25945927)
chr2 (63-126)||(36065480-36065544)
[»] chr5 (7 HSPs)
chr5 (64-126)||(18508788-18508851)
chr5 (24-153)||(18968738-18968871)
chr5 (50-126)||(9989980-9990056)
chr5 (28-148)||(8417561-8417690)
chr5 (54-126)||(9990189-9990262)
chr5 (64-126)||(35463829-35463892)
chr5 (50-126)||(18968533-18968610)
[»] chr6 (1 HSPs)
chr6 (50-127)||(1211660-1211738)
[»] scaffold0220 (1 HSPs)
scaffold0220 (64-126)||(26001-26064)


Alignment Details
Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 55620191 - 55620333
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    |||||||||||| ||||||| |  | ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||| |||    
T  55620191 taggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagtctgtttaggtcccttaactttattaaaa 55620290  T
Q  123 gtat--------tcatttctgttaatttaattcagaaaacgtt 157  Q
    ||||        || ||||||||||||||||||| ||||||||    
T  55620291 gtatcagtttggtcctttctgttaatttaattcaaaaaacgtt 55620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 55627495 - 55627637
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    |||||||||||| ||||||| |  | ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||| |||    
T  55627495 taggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagtctgtttaggtcccttaactttattaaaa 55627594  T
Q  123 gtat--------tcatttctgttaatttaattcagaaaacgtt 157  Q
    ||||        || ||||||||||||||||||| ||||||||    
T  55627595 gtatcagtttggtcctttctgttaatttaattcaaaaaacgtt 55627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 1113234 - 1113311
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| ||||||||| |||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  1113234 taacttgatttcaagtatcgggttggtcccataagtaataaaaagtctgtttaggtcccttaactttatttaaagtat 1113311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 24039250 - 24039351
Alignment:
Q  26 ggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagt 124  Q
    |||||||||||||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| ||||  |||||||||| |||| ||||||||||||    
T  24039250 ggcttaaatgttcaattgatcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagttcgtttaggtcctttaattttatttaaagt 24039349  T
Q  125 at 126  Q
    ||    
T  24039350 at 24039351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 17254789 - 17254714
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 124  Q
    ||||||||||| |||||| |||||| |||||||| |||||| | ||| |||||||| |||||||||||||||||||    
T  17254789 taacttgatttcaagtattggtttgatctcataagtaataaaatgtccgtttaggtcccttaactttatttaaagt 17254714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 51399254 - 51399317
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||| ||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  51399254 gtatcgctttggtcccataagtaataaaaagtctgtttaggtcccttaactttatttaaagtat 51399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 1113520 - 1113443
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||| | ||||||| |||||||| ||| | |||||||||||| ||||||||| |||||||||||    
T  1113520 taacttgatttcaagtattgatttggtcccataaatattaaaaggtctgtttaggtcccttaacttcatttaaagtat 1113443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 8607800 - 8607877
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| ||||||||||||| || ||||| |||||| | ||| ||||| || |||||||||||||||||||||    
T  8607800 taacttgatttcaagtatcggtttgatcccataagtaataaaaggtccgtttaagtcccttaactttatttaaagtat 8607877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 24039592 - 24039515
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||| ||||||||||||||| |||||| | ||  |||||||| |||||||||||||| ||||||    
T  24039592 taacttgatttcaagtattggtttggtctcataagtaataaaaggttcgtttaggtcccttaactttattttaagtat 24039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 29430248 - 29430171
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||||||||||||||| ||||||||| ||||| |||||| | || ||||||| | |||||| ||||||||||||||    
T  29430248 taacttgattttaagtattggtttggtcccataagtaataaaaggtatgtttagatcccttaattttatttaaagtat 29430171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 36215673 - 36215750
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttag-gtccttaactttatttaaagtat 126  Q
    |||||| |||| |||||||||||||||| ||||| |||||| | ||| ||||||  ||||||||||||||||||||||    
T  36215673 taacttaatttcaagtatcggtttggtcccataagtaataaaaggtccgtttagattccttaactttatttaaagtat 36215750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 43099355 - 43099424
Alignment:
Q  57 attttaagtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 126  Q
    ||||||| |||||||||| |  ||||| |||||| | ||| |||||||||||||||||||||||||||||    
T  43099355 attttaaatatcggtttgattccataagtaataaaaggtccgtttaggtccttaactttatttaaagtat 43099424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 49905766 - 49905829
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||| ||||||||||||| |||||| | ||| |||||||| |||||||||||||||||||||    
T  49905766 gtatcgctttggtctcataagtaataaaaggtccgtttaggtcccttaactttatttaaagtat 49905829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 48018634 - 48018711
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| || ||||||||||||| || || |||||| |  ||||||||| | |||||| ||||||||||||||    
T  48018634 taacttgatttaaaatatcggtttggtcccaaaagtaataaaatatctgtttagatcccttaattttatttaaagtat 48018711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 52285079 - 52285154
Alignment:
Q  51 aacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 126  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  52285079 aacttaattttaagtattggtttggtctcataagtaataaaaagtccgtttaggtccttaactttatttaaagtat 52285154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 7714196 - 7714273
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||| |||||||||||||||||||||    
T  7714196 taacttgattttaagtatcggtttggtcccataagtaataaaaagtctgtctaggtcccttaactttatttaaagtat 7714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 47422204 - 47422127
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  47422204 taacttgatttcaagtatcggtttggtcccataagtaataagaggtctgtttaggtcccttaactttatttaaagtat 47422127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 52285420 - 52285318
Alignment:
Q  25 aggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaag 123  Q
    ||||||||||||||||||| |  | |||||||||||||||||||  |||||||  |||| |||||| | |||||||||||| ||||||||||||||||||    
T  52285420 aggcttaaatgttcttttggtcccttaacttgattttaagtatcaatttggtcctataagtaataaaaggtctgtttaggtcccttaactttatttaaag 52285321  T
Q  124 tat 126  Q
    |||    
T  52285320 tat 52285318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 39277925 - 39277848
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||||||||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||||||    
T  39277925 taacttgatttcaagtatcggtttggtcccataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 39277848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 19920496 - 19920606
Alignment:
Q  17 aaaaagataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaacttt 115  Q
    ||||| ||||||||||||| ||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| |  || |||||||| ||||||||||    
T  19920496 aaaaaaataggcttaaatgctcaattgatcccttaacttgatttcaagtatcggtttggtcccataagtaataaaagatccgtttaggtcccttaacttt 19920595  T
Q  116 atttaaagtat 126  Q
    |||||||||||    
T  19920596 atttaaagtat 19920606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 45823154 - 45823053
Alignment:
Q  26 ggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 124  Q
    |||||||||||||  |||||  | ||||||||||| || ||| ||||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||||    
T  45823154 ggcttaaatgttcaattgatcccttaacttgatttcaaatattggtttggtcccataagtaataaaaagtccgtttaggtcccttaactttatttaaagt 45823055  T
Q  125 at 126  Q
    ||    
T  45823054 at 45823053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 16959204 - 16959107
Alignment:
Q  27 gcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaag 123  Q
    ||||||||| |||||||||    | ||||||||| |||||||||||||||| ||||| |||||| || | ||||||||| ||||||||||||||||||    
T  16959204 gcttaaatgctcttttgatcctttgacttgatttcaagtatcggtttggtcccataagtaataaaaattatgtttaggtcccttaactttatttaaag 16959107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 28990323 - 28990400
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||| | |||||| |||||||||||||||||||||    
T  28990323 taacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgcttaggtcccttaactttatttaaagtat 28990400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 39277606 - 39277683
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| |||| ||||||| |||||||| ||||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  39277606 taacttaatttcaagtatcagtttggtcccataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 39277683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 47421915 - 47421988
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    ||||||||||| || ||||||||||||| ||||| |||||| | |||||||||||| |||||||||||||||||    
T  47421915 taacttgatttcaaatatcggtttggtcccataagtaataaaatgtctgtttaggtcccttaactttatttaaa 47421988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 27334369 - 27334445
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagta 125  Q
    ||||||||||| |||||||| ||||||||||||| |||||| |  || |||||||| ||||||||||||||||||||    
T  27334369 taacttgatttcaagtatcgatttggtctcataagtaataaaagatccgtttaggtcccttaactttatttaaagta 27334445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 30050281 - 30050181
Alignment:
Q  27 gcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtc-cttaactttatttaaagta 125  Q
    ||||||||||||||||| |    ||||||||||| |||||||||||||||| || || |||||| ||||| | ||| ||| |||||||||||||||||||    
T  30050281 gcttaaatgttcttttggtccattaacttgatttcaagtatcggtttggtcgcacaagtaataaaaagtccgattatgtctcttaactttatttaaagta 30050182  T
Q  126 t 126  Q
    |    
T  30050181 t 30050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 36077197 - 36077121
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttagg-tccttaactttatttaaagta 125  Q
    ||||||||||| ||||||||||||| || ||||| |||||| | ||||||||||| || ||||||||||||||||||    
T  36077197 taacttgatttcaagtatcggtttgctcccataagtaataaaaggtctgtttaggttcattaactttatttaaagta 36077121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 30049918 - 30050016
Alignment:
Q  29 ttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgttt-aggtccttaactttatttaaagtat 126  Q
    ||||||| ||||||| |  | |||||| |||| |||||||||||||||||||||  |||||| ||||| |||| ||  |||||||||||||||||||||    
T  30049918 ttaaatgctcttttggtcccttaactttatttcaagtatcggtttggtctcatatgtaataaaaagtccgtttgagtcccttaactttatttaaagtat 30050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 45822811 - 45822930
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat--------tcatttctgttaat 140  Q
    |||||| |||| |||||||  ||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||||||        || |||||||||||    
T  45822811 taacttaatttcaagtatcaatttggtcccataagtaataaaaagtccgtttaggttccttaactttatttaaagtatcagcttagtcctttctgttaat 45822910  T
Q  141 ttaattcagaaaacgttaag 160  Q
    |||||||| |||| ||||||    
T  45822911 ttaattcaaaaaatgttaag 45822930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 10394154 - 10394231
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||  |||||| | |||||||||||||||||||||    
T  10394154 taacttgatttcaagtatcggtttggtcccataagtaataaaaggttcgtttagatcccttaactttatttaaagtat 10394231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 10394473 - 10394396
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||| | ||||||| |||||||| ||| | ||| |||||||| |||||||||||||||||||||    
T  10394473 taacttgatttcaagtattgttttggtcccataaatattaaaaggtccgtttaggtcccttaactttatttaaagtat 10394396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 16958866 - 16958939
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    ||||||||||| |||| ||||||||||| |||||||||||| | |||  ||||||| |||||||||||||||||    
T  16958866 taacttgatttcaagtgtcggtttggtcccataaataataaaaggtccatttaggtcccttaactttatttaaa 16958939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 28990641 - 28990564
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||| ||||||||| ||||| |||||| | ||| |||||||| ||||||||| |||||||||||    
T  28990641 taacttgatttcaagtattggtttggtcccataagtaataaaaggtccgtttaggtcccttaacttcatttaaagtat 28990564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 49186024 - 49186100
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagta 125  Q
    ||||||||||| ||||||| ||||||||| |||| |||||| | ||| ||||| |||| ||||||||||||||||||    
T  49186024 taacttgatttcaagtatcagtttggtcttataagtaataaaaggtccgtttacgtcctttaactttatttaaagta 49186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 36076909 - 36076986
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| ||||||||| ||| || ||||| |||||| | ||  |||||||| |||||||||||||||||||||    
T  36076909 taacttgatttcaagtatcggcttgatcccataagtaataaaaggttcgtttaggtcccttaactttatttaaagtat 36076986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 15158349 - 15158424
Alignment:
Q  52 acttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||| |||||||||||||||| ||||| |||||| | ||  |||||||| |||||| ||||||| ||||||    
T  15158349 acttgatttcaagtatcggtttggtcccataagtaataaaaggttcgtttaggtcccttaaatttatttcaagtat 15158424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 31071283 - 31071145
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    |||||||||||| ||||||  |  | ||||||||||| ||||||||||||| || |||||||||||| | |||||||||||| |||||||||||||||||    
T  31071283 taggcttaaatgctcttttcttcccttaacttgatttcaagtatcggtttgatcccataaataataaaaggtctgtttaggtcccttaactttatttaaa 31071184  T
Q  123 gtat--------tcatttctgttaatttaattcagaaaa 153  Q
    ||||        |||||||||||||||||||||| ||||    
T  31071183 gtatcagtttggtcatttctgttaatttaattcaaaaaa 31071145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 49220425 - 49220348
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||| |||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  49220425 taacttaatttcaagtatcggtttggtcccataaataataaaaagtctgtttaggtcccttaactttatttaaagtat 49220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 11047347 - 11047209
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    |||||||||||||||  ||| |  | ||||||||||| |||||||||||||||| ||||| |||||| | ||| |||||||| |||||||||||||||||    
T  11047347 taggcttaaatgttcaattggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaactttatttaaa 11047248  T
Q  123 gtat--------tcatttctgttaatttaattcagaaaa 153  Q
    ||||        |||||||||||||||||||||| ||||    
T  11047247 gtattagtttggtcatttctgttaatttaattcaaaaaa 11047209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 49220138 - 49220211
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaa 122  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||||||    
T  49220138 taacttgattttaagtatcggtttagtcccataaataataaaaagtccgtttaggtcctttaactttatttaaa 49220211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 28253783 - 28253671
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat--------tcatttctgttaat 140  Q
    ||||||||||| ||||||||| |||||| |||||||||||| | ||||| ||| || |||||||||||||||||||||        ||||||||||||||    
T  28253783 taacttgatttcaagtatcggattggtcccataaataataaaaggtctgattaagtcccttaactttatttaaagtatcagtttgatcatttctgttaat 28253684  T
Q  141 ttaattcagaaaa 153  Q
    |||||||| ||||    
T  28253683 ttaattcaaaaaa 28253671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 31070947 - 31071045
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaa 121  Q
    |||||||||||||||||||| |  | ||||||||||||||||||| |||||||| ||||| |||||| |  || ||||| || ||||||||||||||||    
T  31070947 taggcttaaatgttcttttggtcccttaacttgattttaagtatcagtttggtcccataagtaataaaagatccgtttaagtcccttaactttatttaa 31071045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 18733945 - 18734042
Alignment:
Q  29 ttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||| ||||||||| |  | ||||||||||| ||||||| |||||||| ||| |||| ||| ||||||||||| || |||||||||||||||||||||    
T  18733945 ttaaacgttcttttggtctcttaacttgatttcaagtatcagtttggtcccat-aatagtaaaaagtctgtttaagtcccttaactttatttaaagtat 18734042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 52857000 - 52857077
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||| |||| |||||||||||||||| ||||| |||||| | ||| |||||| | |||||||||||||||||||||    
T  52857000 taacttaatttcaagtatcggtttggtcccataagtaataaaaggtccgtttagataccttaactttatttaaagtat 52857077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 18734238 - 18734154
Alignment:
Q  23 ataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc 107  Q
    |||| |||||||| |||||||||    |||||| |||||||||||||| |||||| | ||| |||||| ||||||||||||||||    
T  18734238 atagacttaaatgctcttttgatccattaactttattttaagtatcggcttggtcccttaagtaataaaaagtctgtttaggtcc 18734154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 46453196 - 46453140
Alignment:
Q  71 tttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||    
T  46453196 tttggtctcataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 46453140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 4953453 - 4953392
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 124  Q
    |||||| ||||||| ||||| |||||| ||||||||||| || |||||||||||||||||||    
T  4953453 gtatcgttttggtcccataagtaataaaaagtctgtttaagtcccttaactttatttaaagt 4953392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 11046992 - 11047068
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 126  Q
    ||||||||||| | |||||||||||||| |||||  ||||| | |||  |||||||| |||||||||||| ||||||    
T  11046992 taacttgatttcatgtatcggtttggtcccataagaaataaaaggtccctttaggtctttaactttatttcaagtat 11047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 26988829 - 26988906
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| |||| ||||||| |||| ||| ||||| |||||| | |||  ||||||||| |||||||||||||||||||    
T  26988829 taactttatttcaagtatcagttttgtcccataagtaataaaatgtccttttaggtcccttaactttatttaaagtat 26988906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 36194996 - 36194893
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaa 122  Q
    |||||||||||| ||||||  |  | |||||||||||||||||||||||||||| |||||||||| | || || |||||||||| |||||||||||||||    
T  36194996 taggcttaaatgctcttttagtcccttaacttgattttaagtatcggtttggtcccataaataatcaaaaatccgtttaggtcctttaactttatttaaa 36194897  T
Q  123 gtat 126  Q
    ||||    
T  36194896 gtat 36194893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 36194624 - 36194728
Alignment:
Q  23 ataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaa 121  Q
    ||||||||||||| ||||||  |  | ||||||||||| |||||||| ||||||| ||||| |||||| |||||||||||| | ||||||||||||||||    
T  36194624 ataggcttaaatgctcttttagtcccttaacttgatttcaagtatcgttttggtcccataagtaataaaaagtctgtttagatcccttaactttatttaa 36194723  T
Q  122 agtat 126  Q
    |||||    
T  36194724 agtat 36194728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 31933272 - 31933374
Alignment:
Q  25 aggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaag 123  Q
    ||||||||||||||||||| |  | ||| |||||||||||||| ||||||||| ||||| |||||| | |||| ||||| | ||||||||||||||||||    
T  31933272 aggcttaaatgttcttttggtcccttaatttgattttaagtattggtttggtcccataagtaataaaaggtctatttagatcccttaactttatttaaag 31933371  T
Q  124 tat 126  Q
    |||    
T  31933372 tat 31933374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 12655064 - 12654967
Alignment:
Q  30 taaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||| |||||||||  | ||||||||||| |||||||||||||||| ||||| |||||| |  || |||||||| |||||||||||||||||||||    
T  12655064 taaatgctcttttgatcccttaacttgatttcaagtatcggtttggtcccataagtaataaaagttccgtttaggtcccttaactttatttaaagtat 12654967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 31933641 - 31933537
Alignment:
Q  23 ataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaa 121  Q
    ||||||||||||| ||||||| |  | ||||||||||| |||||||||||||||| ||||| |||||| |||||  ||||| |||  |||||||||||||    
T  31933641 ataggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagtccatttagatccgctaactttatttaa 31933542  T
Q  122 agtat 126  Q
    |||||    
T  31933541 agtat 31933537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 13557482 - 13557405
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||| |||||||| ||||||||| |||||||||||    
T  13557482 taacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaacttcatttaaagtat 13557405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 12654703 - 12654802
Alignment:
Q  28 cttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttag-gtccttaactttatttaaagtat 126  Q
    |||||||| ||||||| |  | |||||| |||| |||| ||||||||||| |||||||||||| | |||  |||||  ||||||||||||||||||||||    
T  12654703 cttaaatgctcttttggtcccttaactttatttcaagtgtcggtttggtcccataaataataaaaggtccatttagtttccttaactttatttaaagtat 12654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 21015261 - 21015198
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| ||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  21015261 gtatcgctttggtcccataagtaataaaaagtctgtttgggtcccttaactttatttaaagtat 21015198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 18847391 - 18847467
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    ||||||||||| |||||||| || |||||||||| |||||| | || |||||| |||| |||||||||||||||||||    
T  18847391 taacttgatttcaagtatcgatt-ggtctcataagtaataaaaggtttgtttatgtcccttaactttatttaaagtat 18847467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 10134646 - 10134709
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| ||||||| ||||| |||||| | ||| |||||||||| |||||||||||||||||||    
T  10134646 gtatcgctttggtcccataagtaataaaaggtccgtttaggtcccttaactttatttaaagtat 10134709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 13557164 - 13557221
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc 107  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||  ||||||||||    
T  13557164 taacttgatttcaagtatcggtttggtcccataagtaataaaaggttcgtttaggtcc 13557221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 18847677 - 18847605
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaa 121  Q
    ||||||||||| ||||||| |||| ||| ||||| |||||| |||||| |||| || |||||||||| |||||    
T  18847677 taacttgatttcaagtatcagttttgtcccataagtaataaaaagtctatttaagtcccttaactttgtttaa 18847605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 8462871 - 8462949
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtatt 127  Q
    ||||||||||| || |||| |||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  8462871 taacttgatttcaaatatcagtttggtcccataaataataaaatgtctgtttaggtcctttaactttatttaaagtatt 8462949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 32871633 - 32871711
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataat-aagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||||||||||||||| ||||||||| |||||||||| || || ||||||||||| |||||||||||||||||||||    
T  32871633 taacttgattttaagtattggtttggtcccataaataataaaaaaatctgtttaggtcccttaactttatttaaagtat 32871711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 6000503 - 6000580
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||  ||||||| |||||||||||||||||||||    
T  6000503 taacttgatttcaagtatcggtttggtcccataagtaataaaaagtccatttaggtcccttaactttatttaaagtat 6000580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 4133180 - 4133105
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 124  Q
    ||||||||||| |||||| |||||| |||||||| |||||| | ||| |||||||| |||||||||||||||||||    
T  4133180 taacttgatttcaagtattggtttgatctcataagtaataaaatgtccgtttaggtcccttaactttatttaaagt 4133105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 43392322 - 43392395
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    ||||||||||| |||||| ||||||||| |||||||| ||| | ||| |||||||| |||||||||||||||||    
T  43392322 taacttgatttcaagtattggtttggtcccataaatattaaaaggtccgtttaggtcccttaactttatttaaa 43392395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 16962882 - 16962945
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| ||||||||||||| |||||| | ||| |||||||||| |||||||||||||||||||    
T  16962882 gtatcgctttggtctcataagtaataaaaggtccgtttaggtccattaactttatttaaagtat 16962945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 6000783 - 6000713
Alignment:
Q  57 attttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||| ||||||| ||||||||  |||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  6000783 atttcaagtatcagtttggtcctataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 6000713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 25731916 - 25732018
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    |||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||| ||||| |||||| | ||||| |||| | ||||||||| |||| ||    
T  25731916 taggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttagtcccataagtaataaaaggtctgcttagatcccttaacttgatttcaa 25732015  T
Q  123 gta 125  Q
    |||    
T  25732016 gta 25732018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 30284246 - 30284147
Alignment:
Q  63 agtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat--------tcatttctgttaatttaattcagaaaa 153  Q
    ||||||| ||||||||||||| |||||| | ||| |||||||| ||||||||||||| |||||||        |||||||||||||||||||||| ||||    
T  30284246 agtatcgctttggtctcataagtaataaaatgtccgtttaggtcccttaactttattgaaagtatcggtttggtcatttctgttaatttaattcaaaaaa 30284147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 18417559 - 18417482
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||| |||| ||||||||||||| ||  ||||||||||| | |||  ||||||| |||||||||||||||||||||    
T  18417559 taactttatttcaagtatcggtttgatcctataaataataaaaggtccatttaggtcccttaactttatttaaagtat 18417482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 32389781 - 32389708
Alignment:
Q  54 ttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    ||||||| ||||||| ||||||||  |||| |||||| | ||||||||| |||| |||||||||||||||||||    
T  32389781 ttgatttcaagtatcagtttggtccaataagtaataaaatgtctgtttaagtcccttaactttatttaaagtat 32389708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 24846289 - 24846345
Alignment:
Q  71 tttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||||| |||||| | ||| |||||||| |||||||||||||||||||||    
T  24846289 tttggtctcataagtaataaaaggtccgtttaggtcccttaactttatttaaagtat 24846345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 30283956 - 30284018
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 126  Q
    |||||| ||||||||||||| |||||| | ||| ||||||  ||||||||| |||||||||||    
T  30283956 gtatcgttttggtctcataagtaataaaaggtccgtttagtcccttaacttcatttaaagtat 30284018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 24485864 - 24485803
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagt 124  Q
    |||||| ||||||| ||||| |||||| ||||| ||||| |||| |||||||||||||||||    
T  24485864 gtatcgttttggtcccataagtaataaaaagtccgtttaagtcccttaactttatttaaagt 24485803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 37691719 - 37691796
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| ||||||||||||| |  ||||| |||||| ||||| | ||| || |||||| ||||||||||||||    
T  37691719 taacttgatttcaagtatcggtttgattccataagtaataaaaagtccgattaagtcccttaattttatttaaagtat 37691796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 472635 - 472699
Alignment:
Q  63 agtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||| ||||||||||||| |||||| | ||  |||||||| ||||||||||||| |||||||    
T  472635 agtatcgttttggtctcataagtaataaaaggtgcgtttaggtcccttaactttattgaaagtat 472699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 14949387 - 14949331
Alignment:
Q  168 tggtagccttgtaagaaacacggtgtagcggcaacattgcaatcaacaccataaaaa 224  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  14949387 tggtggccttgcaggaaacacggtgtagcggcaacattgcaatcaacaccataaaaa 14949331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 12701951 - 12702029
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtatt 127  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||| |||||||| ||||||||| ||||||||||||    
T  12701951 taacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaacttcatttaaagtatt 12702029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 12702269 - 12702196
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    ||||||||| | |||||||||||||||| ||||| |||||| | ||| |||||||| |||||||||||||||||    
T  12702269 taacttgatatcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaactttatttaaa 12702196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 12261167 - 12261092
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 124  Q
    ||||||||||| |||||||||||||||| |||||  ||||| | ||| |||||| | |||||||||||||||||||    
T  12261167 taacttgatttcaagtatcggtttggtcacataagcaataaaaggtccgtttagctcccttaactttatttaaagt 12261092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 2217950 - 2217873
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||  ||||||||| ||||| |||||| | ||| ||||| || |||||||||||||||||||||    
T  2217950 taacttgatttcaagtaatggtttggtcccataagtaataaaatgtccgtttatgtcccttaactttatttaaagtat 2217873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 21304326 - 21304425
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtc-cttaactttatttaaa 122  Q
    |||||||||||| ||  |||||  | ||||||||||| || ||||||||||||| ||||| |||||| | ||  |||||| || ||||||||||||||||    
T  21304326 taggcttaaatgctcaattgatcccttaacttgatttcaaatatcggtttggtcccataagtaataaaatgttcgtttagatcgcttaactttatttaaa 21304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 25945864 - 25945927
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| ||||||| ||||| |||||| |  ||||||||||||| |||||||||||||||||||    
T  25945864 gtatcgctttggtcccataagtaataaaagatctgtttaggtcccttaactttatttaaagtat 25945927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 36065544 - 36065480
Alignment:
Q  63 agtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||| ||||||||||||| |||||| | ||| |||| ||| ||||||||||||| |||||||    
T  36065544 agtatcgttttggtctcataagtaataaaaggtccgttttggtcccttaactttattgaaagtat 36065480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 18508851 - 18508788
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttagg-tccttaactttatttaaagtat 126  Q
    |||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18508851 gtatcgatttggtcccataaataataaaaagtctgtttaggttccttaactttatttaaagtat 18508788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 18968871 - 18968738
Alignment:
Q  24 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 122  Q
    |||| ||||||| ||  |||||| | ||||||||||| ||||||||||||| || |||||||||||| | || ||||| | | |||||||||||| ||||    
T  18968871 taggtttaaatgctcaattgattccttaacttgatttcaagtatcggtttgatcccataaataataaaaggtatgtttggatcccttaactttatataaa 18968772  T
Q  123 gtat---tcatttctgttaatttaattcagaaaa 153  Q
    ||||   |||||| ||||||||||||||| ||||    
T  18968771 gtatttgtcatttatgttaatttaattcaaaaaa 18968738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 9989980 - 9990056
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||||||| |||||||||||| ||||| |||||| | || ||||||||| |||||||||||||||||||||    
T  9989980 taacttgattttaagaatcggtttggtc-cataattaataaaaggtatgtttaggtcccttaactttatttaaagtat 9990056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 8417561 - 8417690
Alignment:
Q  28 cttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    |||||||| ||||||| |  | ||||||||||| ||||||||||||| ||||| || |||||| |  || |||||||| |||||||||||||||||||||    
T  8417561 cttaaatgctcttttggtcccttaacttgatttcaagtatcggtttgatctcacaagtaataaaagttccgtttaggtcccttaactttatttaaagtat 8417660  T
Q  127 --------tcatttctgttaatttaattca 148  Q
            ||||||||||||||||||||||    
T  8417661 cagtctggtcatttctgttaatttaattca 8417690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 9990262 - 9990189
Alignment:
Q  54 ttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||||||| ||||| | ||||||||||| | |  ||||||||||| |||||||||||||||||||||    
T  9990262 ttgattttaagtatcagtttgatttcataaataatgaaagatctgtttaggtcccttaactttatttaaagtat 9990189  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 35463892 - 35463829
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| ||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  35463892 gtatcgctttggtcccataagtaataaaaagtctgtttcggtcccttaactttatttaaagtat 35463829  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 18968533 - 18968610
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 126  Q
    ||||||||||| |||||| |||||||| ||||||  ||||| |  || |||||||| |||||||||||||||||||||    
T  18968533 taacttgatttcaagtattggtttggtttcataatcaataaaagatccgtttaggtcccttaactttatttaaagtat 18968610  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 1211738 - 1211660
Alignment:
Q  50 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtatt 127  Q
    ||||||||||| ||||||| |||||||||||||| |||||| |  ||||||||| | ||||||||||||||||||||||    
T  1211738 taacttgatttcaagtatctgtttggtctcataagtaataaaagatctgtttagatcccttaactttatttaaagtatt 1211660  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 26001 - 26064
Alignment:
Q  64 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 126  Q
    |||||| ||||||| ||||| |||||| |||| |||||| |||| |||||||||||||||||||    
T  26001 gtatcgctttggtcccataagtaataaaaagtttgtttaagtcccttaactttatttaaagtat 26064  T

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