View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15033_low_8 (Length: 284)

Name: NF15033_low_8
Description: NF15033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15033_low_8
NF15033_low_8
[»] chr3 (43 HSPs)
chr3 (40-195)||(18747839-18747997)
chr3 (63-195)||(4161589-4161722)
chr3 (63-193)||(6224444-6224575)
chr3 (13-87)||(17586370-17586444)
chr3 (63-166)||(4145455-4145557)
chr3 (36-87)||(12559656-12559707)
chr3 (147-195)||(43426905-43426954)
chr3 (133-193)||(38375062-38375124)
chr3 (37-87)||(11328401-11328451)
chr3 (133-195)||(17758061-17758125)
chr3 (133-195)||(19059381-19059445)
chr3 (38-89)||(15521724-15521775)
chr3 (36-87)||(17522305-17522356)
chr3 (147-195)||(39657403-39657453)
chr3 (17-83)||(9590179-9590245)
chr3 (12-162)||(19431619-19431768)
chr3 (113-191)||(25660887-25660968)
chr3 (113-191)||(25667292-25667373)
chr3 (113-191)||(25673697-25673778)
chr3 (133-195)||(17586272-17586335)
chr3 (147-193)||(31411033-31411081)
chr3 (38-87)||(39657305-39657354)
chr3 (39-87)||(13300886-13300934)
chr3 (39-87)||(13311542-13311590)
chr3 (47-87)||(48422342-48422382)
chr3 (12-55)||(11403337-11403380)
chr3 (36-87)||(12348729-12348780)
chr3 (37-84)||(12487218-12487265)
chr3 (147-195)||(14081355-14081405)
chr3 (36-87)||(14304823-14304874)
chr3 (36-75)||(15856713-15856752)
chr3 (36-87)||(16181367-16181418)
chr3 (36-75)||(17394105-17394144)
chr3 (12-55)||(50313948-50313991)
chr3 (37-87)||(14081257-14081307)
chr3 (37-87)||(17102113-17102163)
chr3 (113-191)||(25680122-25680203)
chr3 (113-191)||(25688426-25688507)
chr3 (37-86)||(6146195-6146244)
chr3 (113-191)||(19659149-19659229)
chr3 (39-87)||(17955441-17955489)
chr3 (37-89)||(38810425-38810477)
chr3 (39-87)||(55440288-55440336)
[»] scaffold0133 (1 HSPs)
scaffold0133 (61-193)||(26053-26184)
[»] chr6 (36 HSPs)
chr6 (61-193)||(17013048-17013179)
chr6 (24-152)||(26518979-26519106)
chr6 (63-197)||(31466932-31467067)
chr6 (38-195)||(14672175-14672333)
chr6 (47-162)||(15514671-15514785)
chr6 (37-87)||(21410489-21410539)
chr6 (17-89)||(18629022-18629094)
chr6 (133-195)||(17082517-17082581)
chr6 (133-195)||(22461487-22461551)
chr6 (130-195)||(21932024-21932091)
chr6 (133-194)||(33537706-33537769)
chr6 (147-195)||(18506725-18506775)
chr6 (144-192)||(23223583-23223633)
chr6 (33-87)||(13014140-13014194)
chr6 (37-87)||(25654895-25654945)
chr6 (37-87)||(33537804-33537854)
chr6 (133-195)||(25654979-25655043)
chr6 (133-194)||(116446-116509)
chr6 (154-195)||(29157847-29157890)
chr6 (36-87)||(18399720-18399771)
chr6 (36-87)||(18584084-18584135)
chr6 (36-87)||(23148742-23148793)
chr6 (36-87)||(25633154-25633205)
chr6 (147-195)||(32352830-32352880)
chr6 (36-87)||(32899569-32899620)
chr6 (133-188)||(15004289-15004346)
chr6 (133-192)||(17547050-17547111)
chr6 (37-87)||(35135450-35135500)
chr6 (133-195)||(22582137-22582201)
chr6 (133-195)||(22584927-22584991)
chr6 (133-195)||(22589758-22589822)
chr6 (36-89)||(25743906-25743959)
chr6 (113-194)||(14355780-14355863)
chr6 (150-195)||(15889106-15889153)
chr6 (147-192)||(22848870-22848917)
chr6 (113-192)||(31159718-31159797)
[»] scaffold0017 (1 HSPs)
scaffold0017 (40-193)||(13525-13680)
[»] chr4 (29 HSPs)
chr4 (40-192)||(54362622-54362776)
chr4 (12-162)||(9652649-9652797)
chr4 (22-89)||(41255810-41255877)
chr4 (130-195)||(15212953-15213020)
chr4 (147-195)||(13589462-13589512)
chr4 (36-87)||(23269352-23269403)
chr4 (37-87)||(15045588-15045638)
chr4 (37-87)||(15108786-15108836)
chr4 (17-87)||(40884979-40885049)
chr4 (147-197)||(41916135-41916187)
chr4 (133-195)||(47467715-47467779)
chr4 (133-193)||(7185206-7185268)
chr4 (147-195)||(10375338-10375388)
chr4 (22-89)||(15012726-15012793)
chr4 (37-83)||(34177086-34177132)
chr4 (12-57)||(15213057-15213102)
chr4 (150-195)||(49072524-49072571)
chr4 (36-87)||(13722515-13722566)
chr4 (12-55)||(19560094-19560137)
chr4 (36-87)||(44056694-44056745)
chr4 (37-87)||(13247192-13247242)
chr4 (133-195)||(15012631-15012693)
chr4 (38-87)||(14901989-14902038)
chr4 (147-197)||(30231839-30231891)
chr4 (38-87)||(47534494-47534543)
chr4 (147-197)||(50219336-50219387)
chr4 (36-84)||(16732950-16732998)
chr4 (130-195)||(18277220-18277287)
chr4 (38-78)||(18493561-18493601)
[»] scaffold0231 (1 HSPs)
scaffold0231 (40-195)||(12056-12211)
[»] chr7 (30 HSPs)
chr7 (63-195)||(4485472-4485604)
chr7 (12-162)||(12193059-12193207)
chr7 (17-87)||(38424826-38424896)
chr7 (147-195)||(9723195-9723245)
chr7 (24-87)||(31501914-31501977)
chr7 (144-196)||(45150389-45150443)
chr7 (37-89)||(9612071-9612123)
chr7 (37-89)||(9839642-9839694)
chr7 (133-194)||(45146179-45146242)
chr7 (36-87)||(11288196-11288247)
chr7 (147-195)||(33560476-33560526)
chr7 (37-87)||(13275536-13275586)
chr7 (133-192)||(21675119-21675180)
chr7 (133-195)||(9251254-9251318)
chr7 (18-87)||(34240640-34240709)
chr7 (130-195)||(16914322-16914389)
chr7 (36-87)||(3060696-3060747)
chr7 (40-87)||(12247537-12247584)
chr7 (36-87)||(13321765-13321816)
chr7 (36-87)||(14419655-14419706)
chr7 (147-194)||(13275635-13275684)
chr7 (156-194)||(18078889-18078927)
chr7 (133-195)||(9318931-9318995)
chr7 (12-53)||(17923218-17923259)
chr7 (113-195)||(17923282-17923366)
chr7 (133-195)||(20582949-20583013)
chr7 (38-87)||(26069034-26069083)
chr7 (38-87)||(26069692-26069741)
chr7 (38-87)||(26093479-26093528)
chr7 (154-195)||(31502032-31502075)
[»] chr2 (36 HSPs)
chr2 (17-87)||(24885402-24885472)
chr2 (129-195)||(6095467-6095535)
chr2 (37-87)||(723148-723198)
chr2 (81-163)||(45572825-45572907)
chr2 (81-163)||(45576492-45576574)
chr2 (81-163)||(45580159-45580241)
chr2 (81-163)||(45583826-45583908)
chr2 (81-163)||(45587493-45587575)
chr2 (81-163)||(45591160-45591242)
chr2 (81-163)||(45594827-45594909)
chr2 (81-163)||(45598494-45598576)
chr2 (81-163)||(45602161-45602243)
chr2 (81-163)||(45605828-45605910)
chr2 (81-163)||(45609495-45609577)
chr2 (81-163)||(45613162-45613244)
chr2 (81-163)||(45616829-45616911)
chr2 (148-195)||(11010515-11010563)
chr2 (39-87)||(19433246-19433294)
chr2 (37-89)||(24086867-24086919)
chr2 (36-87)||(31145594-31145645)
chr2 (148-195)||(9638237-9638286)
chr2 (17-87)||(16446488-16446558)
chr2 (37-87)||(23821221-23821271)
chr2 (37-87)||(23830300-23830350)
chr2 (133-195)||(43646705-43646767)
chr2 (37-78)||(7322290-7322331)
chr2 (130-195)||(19667389-19667456)
chr2 (47-87)||(24293949-24293989)
chr2 (131-195)||(723231-723297)
chr2 (39-191)||(20510994-20511147)
chr2 (36-87)||(42535384-42535435)
chr2 (133-192)||(25595839-25595899)
chr2 (148-194)||(24278593-24278641)
chr2 (39-87)||(19668561-19668609)
chr2 (150-195)||(24885526-24885573)
chr2 (39-87)||(25875355-25875403)
[»] scaffold0112 (1 HSPs)
scaffold0112 (62-163)||(13913-14013)
[»] scaffold0387 (1 HSPs)
scaffold0387 (13-87)||(422-496)
[»] chr8 (35 HSPs)
chr8 (13-83)||(27232535-27232605)
chr8 (12-87)||(18260912-18260987)
chr8 (130-192)||(23223338-23223402)
chr8 (17-87)||(33610467-33610537)
chr8 (17-86)||(23151262-23151331)
chr8 (113-195)||(24625617-24625701)
chr8 (133-192)||(17502976-17503036)
chr8 (148-193)||(31590819-31590866)
chr8 (147-195)||(18040926-18040976)
chr8 (36-87)||(21681761-21681812)
chr8 (147-195)||(33173029-33173079)
chr8 (17-87)||(29307180-29307250)
chr8 (37-83)||(33529189-33529235)
chr8 (37-87)||(39446182-39446232)
chr8 (165-197)||(22496612-22496644)
chr8 (133-194)||(33610369-33610432)
chr8 (12-55)||(11600932-11600975)
chr8 (38-85)||(20496265-20496312)
chr8 (36-87)||(20653450-20653501)
chr8 (36-87)||(22982049-22982100)
chr8 (147-195)||(23218683-23218732)
chr8 (148-192)||(45464501-45464547)
chr8 (17-87)||(23158919-23158989)
chr8 (17-87)||(23350912-23350982)
chr8 (133-195)||(25297006-25297071)
chr8 (133-195)||(25759026-25759091)
chr8 (144-195)||(33529284-33529337)
chr8 (113-195)||(22314878-22314962)
chr8 (38-87)||(23225582-23225631)
chr8 (133-195)||(23351017-23351081)
chr8 (38-87)||(38534433-38534482)
chr8 (146-192)||(39446084-39446132)
chr8 (130-195)||(41506244-41506308)
chr8 (130-195)||(15934036-15934103)
chr8 (147-195)||(24551967-24552014)
[»] scaffold0183 (1 HSPs)
scaffold0183 (18-166)||(11729-11875)
[»] scaffold0028 (1 HSPs)
scaffold0028 (17-87)||(80300-80370)
[»] scaffold0331 (1 HSPs)
scaffold0331 (80-160)||(5205-5284)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-87)||(89305-89373)
[»] chr5 (30 HSPs)
chr5 (17-89)||(6457340-6457412)
chr5 (37-87)||(37984127-37984177)
chr5 (147-197)||(11966137-11966189)
chr5 (133-195)||(37984212-37984276)
chr5 (32-87)||(22662125-22662180)
chr5 (37-87)||(433214-433264)
chr5 (37-87)||(3674646-3674696)
chr5 (37-87)||(5450254-5450304)
chr5 (37-87)||(7729203-7729253)
chr5 (133-191)||(10176023-10176081)
chr5 (13-75)||(19315848-19315910)
chr5 (133-192)||(19874550-19874611)
chr5 (37-87)||(28902976-28903026)
chr5 (37-87)||(28939371-28939421)
chr5 (147-197)||(3674745-3674797)
chr5 (36-87)||(19406317-19406368)
chr5 (147-191)||(23233905-23233951)
chr5 (147-195)||(23418102-23418152)
chr5 (36-87)||(23515305-23515356)
chr5 (36-87)||(24182553-24182604)
chr5 (37-75)||(19315822-19315860)
chr5 (148-195)||(21110579-21110628)
chr5 (37-83)||(23467215-23467261)
chr5 (133-195)||(6457445-6457508)
chr5 (135-197)||(16596340-16596404)
chr5 (36-89)||(21397867-21397920)
chr5 (112-157)||(24516763-24516808)
chr5 (38-78)||(16596255-16596295)
chr5 (13-85)||(20726438-20726510)
chr5 (133-190)||(21215810-21215869)
[»] scaffold0561 (1 HSPs)
scaffold0561 (144-192)||(2314-2364)
[»] scaffold0022 (2 HSPs)
scaffold0022 (133-197)||(67351-67417)
scaffold0022 (17-83)||(132548-132614)
[»] scaffold0772 (1 HSPs)
scaffold0772 (33-163)||(2141-2270)
[»] scaffold0151 (1 HSPs)
scaffold0151 (17-87)||(21829-21899)
[»] scaffold0004 (2 HSPs)
scaffold0004 (133-195)||(87173-87235)
scaffold0004 (113-191)||(370694-370774)
[»] chr1 (21 HSPs)
chr1 (37-87)||(36355706-36355756)
chr1 (17-87)||(49996722-49996792)
chr1 (150-193)||(18851787-18851831)
chr1 (135-195)||(22828760-22828822)
chr1 (133-195)||(25094677-25094740)
chr1 (37-87)||(16646695-16646745)
chr1 (37-87)||(16657423-16657473)
chr1 (113-191)||(18621227-18621305)
chr1 (17-78)||(19603870-19603931)
chr1 (147-197)||(19603971-19604023)
chr1 (113-191)||(23475187-23475267)
chr1 (133-195)||(33398137-33398201)
chr1 (133-197)||(16646780-16646846)
chr1 (36-87)||(20446426-20446477)
chr1 (36-87)||(20887266-20887317)
chr1 (133-197)||(38033016-38033082)
chr1 (38-85)||(38033119-38033166)
chr1 (37-87)||(4975079-4975129)
chr1 (17-87)||(22142778-22142848)
chr1 (37-87)||(51627108-51627158)
chr1 (147-196)||(5767561-5767612)
[»] scaffold0149 (1 HSPs)
scaffold0149 (147-197)||(32736-32788)
[»] scaffold0025 (1 HSPs)
scaffold0025 (22-87)||(86249-86314)
[»] scaffold1518 (1 HSPs)
scaffold1518 (64-155)||(875-965)
[»] scaffold0610 (1 HSPs)
scaffold0610 (36-87)||(10-61)
[»] scaffold0347 (1 HSPs)
scaffold0347 (12-163)||(5045-5195)
[»] scaffold0228 (3 HSPs)
scaffold0228 (39-195)||(6317-6474)
scaffold0228 (39-195)||(13899-14056)
scaffold0228 (39-195)||(23851-24008)
[»] scaffold0049 (1 HSPs)
scaffold0049 (133-197)||(32786-32852)
[»] scaffold0035 (2 HSPs)
scaffold0035 (36-87)||(108883-108934)
scaffold0035 (36-87)||(117384-117435)
[»] scaffold0808 (2 HSPs)
scaffold0808 (37-87)||(1730-1780)
scaffold0808 (147-190)||(1637-1681)
[»] scaffold0095 (2 HSPs)
scaffold0095 (37-87)||(33144-33194)
scaffold0095 (146-192)||(33046-33094)
[»] scaffold0669 (1 HSPs)
scaffold0669 (154-195)||(2871-2912)
[»] scaffold0589 (1 HSPs)
scaffold0589 (38-87)||(8565-8614)
[»] scaffold0406 (1 HSPs)
scaffold0406 (147-193)||(14843-14891)
[»] scaffold0092 (1 HSPs)
scaffold0092 (38-87)||(4079-4128)
[»] scaffold0205 (1 HSPs)
scaffold0205 (66-193)||(8693-8819)
[»] scaffold0068 (2 HSPs)
scaffold0068 (36-84)||(48900-48948)
scaffold0068 (36-84)||(62348-62396)
[»] scaffold0058 (1 HSPs)
scaffold0058 (113-197)||(73546-73630)
[»] scaffold1932 (1 HSPs)
scaffold1932 (133-195)||(742-805)
[»] scaffold1867 (1 HSPs)
scaffold1867 (36-87)||(920-971)
[»] scaffold0537 (1 HSPs)
scaffold0537 (36-87)||(673-724)
[»] scaffold0338 (1 HSPs)
scaffold0338 (36-87)||(9765-9816)
[»] scaffold0302 (1 HSPs)
scaffold0302 (36-87)||(12860-12911)
[»] scaffold0120 (1 HSPs)
scaffold0120 (36-87)||(22277-22328)
[»] scaffold0116 (1 HSPs)
scaffold0116 (36-87)||(30861-30912)
[»] scaffold0057 (1 HSPs)
scaffold0057 (147-195)||(6675-6725)
[»] scaffold0044 (1 HSPs)
scaffold0044 (36-87)||(39079-39130)
[»] scaffold0037 (1 HSPs)
scaffold0037 (36-87)||(97592-97643)
[»] scaffold0034 (2 HSPs)
scaffold0034 (36-87)||(41438-41489)
scaffold0034 (36-87)||(46945-46996)
[»] scaffold0021 (2 HSPs)
scaffold0021 (36-87)||(16679-16730)
scaffold0021 (36-87)||(26210-26261)
[»] scaffold0011 (1 HSPs)
scaffold0011 (36-87)||(122628-122679)
[»] scaffold0001 (3 HSPs)
scaffold0001 (36-87)||(70041-70092)
scaffold0001 (36-87)||(79306-79357)
scaffold0001 (12-75)||(151345-151408)
[»] scaffold0162 (1 HSPs)
scaffold0162 (37-87)||(6491-6541)
[»] scaffold0160 (1 HSPs)
scaffold0160 (37-87)||(765-815)
[»] scaffold0123 (1 HSPs)
scaffold0123 (17-87)||(11637-11707)
[»] scaffold0031 (1 HSPs)
scaffold0031 (33-87)||(71389-71443)
[»] scaffold0692 (1 HSPs)
scaffold0692 (36-89)||(4537-4590)
[»] scaffold0357 (1 HSPs)
scaffold0357 (133-195)||(7204-7268)
[»] scaffold0111 (1 HSPs)
scaffold0111 (113-195)||(25292-25376)
[»] scaffold0018 (1 HSPs)
scaffold0018 (113-191)||(61849-61929)
[»] scaffold0008 (1 HSPs)
scaffold0008 (36-89)||(127640-127693)
[»] scaffold0447 (1 HSPs)
scaffold0447 (36-84)||(9948-9996)
[»] scaffold0305 (1 HSPs)
scaffold0305 (113-194)||(10299-10382)
[»] scaffold0153 (1 HSPs)
scaffold0153 (133-194)||(9284-9346)
[»] scaffold0078 (1 HSPs)
scaffold0078 (39-87)||(36541-36589)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-195)||(196646-196709)


Alignment Details
Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 18747839 - 18747997
Alignment:
Q  40 aatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcac 139  Q
    |||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  18747839 aatgaccaaattacccctgaatccaaaatgactaaattacccttctaataccgaattctaataatcccaaccaaaaatacacacagaggcaattaatcac 18747938  T
Q  140 ataaaaacacatataaacacatatt--aacaatt-aaaaataattctagcgaaaatcgg 195  Q
    |||||| ||||||| ||||| ||||  ||||||| |||||||| |||| ||||||||||    
T  18747939 ataaaagcacatatcaacacgtattaaaacaattaaaaaataaatctaacgaaaatcgg 18747997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 4161722 - 4161589
Alignment:
Q  63 caaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
    ||||||||| ||| || | |||| ||| |||||| ||||||||||||| ||||||| ||||||| |||||||||||||||||| || ||| |||||||||    
T  4161722 caaaatgaccaaaataccattcttataccgaattctaataatcccaaccaaaaatatacacagaggcaattaatcacataaaagcatataaaaacacata 4161623  T
Q  163 tt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    ||  ||||||| ||||||| |||||||||||||||    
T  4161622 ttaaaacaatt-aaaataaatctagcgaaaatcgg 4161589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 6224575 - 6224444
Alignment:
Q  63 caaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
    ||||||||| ||| || |||||  ||| | |||| ||||||||||||  ||||||||||||||| |||||||||||||||||| || ||| |||||||||    
T  6224575 caaaatgaccaaaatacccttcgtataccaaattctaataatcccaatcaaaaatacacacagaggcaattaatcacataaaagcatataaaaacacata 6224476  T
Q  163 tt--aacaattaaaaataattctagcgaaaatc 193  Q
    ||  ||||||| ||||||| ||||| |||||||    
T  6224475 ttaaaacaatt-aaaataaatctagtgaaaatc 6224444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 17586444 - 17586370
Alignment:
Q  13 aaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||| ||| |||||||||  ||||||||||||| |||||||||||||||||| ||||||||    
T  17586444 aaaatactaatttacccttactcacaaaatgatcaaaatacccctgagtccaaaatgactaaattacccttctaa 17586370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 4145557 - 4145455
Alignment:
Q  63 caaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
    ||||||||| ||| || |||||  ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||| || ||| || ||||||    
T  4145557 caaaatgaccaaaatacccttcgtataccgaattctaataatcc-aaccaaaaatacacacagaggcaattaatcacataaaagcatataaaatcacata 4145459  T
Q  163 ttaa 166  Q
    ||||    
T  4145458 ttaa 4145455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 12559707 - 12559656
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  12559707 acaaaatgacaaaaatacccctgaatccaaaatgactaaattacccttctaa 12559656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 43426954 - 43426905
Alignment:
Q  147 cacatataaacacatattaa-caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43426954 cacatataaacacatattaaacaattaaaaataattctagcgaaaatcgg 43426905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 38375124 - 38375062
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatc 193  Q
    |||||||| | || ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  38375124 taatcacacacaagcacatataaacacatattaaaacaattaaaaataattctagcgaaaatc 38375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 11328451 - 11328401
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  11328451 caaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 11328401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 17758125 - 17758061
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  17758125 taatcacacacaagcacatataaacacatattaaaacaattaaaaataattctagcaaaaatcgg 17758061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 19059445 - 19059381
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  19059445 taatcacacacaagcacatataaacacatattaaaacaattaaaaataattctagcaaaaatcgg 19059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 15521724 - 15521775
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||||| ||||||||||| | |||||||||||||||||| ||||||||||    
T  15521724 aaaatgaccaaaataccccttagtccaaaatgactaaattacccttctaata 15521775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 17522356 - 17522305
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| ||||||||||||||||| || ||||||||    
T  17522356 acaaaatgaccaaaatacccctaaatccaaaatgactaaagtacccttctaa 17522305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 39657403 - 39657453
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  39657403 cacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 39657453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 9590245 - 9590179
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatcctt 83  Q
    |||||| ||||||| |||| ||||||||| |||||| |||||  |||||||||||||||||| ||||    
T  9590245 tactaatttacccttacttgcaaaatgaccaaaatatccctgcgtccaaaatgactaaattaccctt 9590179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 19431619 - 19431768
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaact 111  Q
    |||| |||||| |||||||  ||  ||||||||| ||||||||||| | | ||||||||||||| || |||||||||  | || |  | ||||||||||     
T  19431619 gaaattactaatttacccttgctcgcaaaatgaccaaaatacccctaagtacaaaatgactaaaatacccttctaatgccaaaatccactaatcccaac- 19431717  T
Q  112 aaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
     ||||||  |||| | |||| |||||||||| || ||||||||||||||||    
T  19431718 caaaatattcacataggcaaataatcacatacaagcacatataaacacata 19431768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 25660968 - 25660887
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaaca--catattaac-aattaaaaataattctagcgaaaa 191  Q
    |||||||||||||| |||||||| |||||| || ||||||||||||  |||| |||  || |||||||||||||||||||||    
T  25660968 aaaatacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaa 25660887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 25667373 - 25667292
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaaca--catattaac-aattaaaaataattctagcgaaaa 191  Q
    |||||||||||||| |||||||| |||||| || ||||||||||||  |||| |||  || |||||||||||||||||||||    
T  25667373 aaaatacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaa 25667292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 25673778 - 25673697
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaaca--catattaac-aattaaaaataattctagcgaaaa 191  Q
    |||||||||||||| |||||||| |||||| || ||||||||||||  |||| |||  || |||||||||||||||||||||    
T  25673778 aaaatacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaa 25673697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 17586335 - 17586272
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  17586335 taatcacacacaagcacata-aaacacatattaaaacaattaaaaataattctagcgaaaatcgg 17586272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 31411081 - 31411033
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatc 193  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  31411081 cacatataaacacatattaaaacaattaaaaataattctagcaaaaatc 31411033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 39657305 - 39657354
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| ||||||||||||| |||||||||||||||||| || |||||    
T  39657305 aaaatgaccaaaatacccctgagtccaaaatgactaaattacccctctaa 39657354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 13300934 - 13300886
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||||| | |||||||||||||||| ||||||||    
T  13300934 aaatgaccaaaatacccctgagttcaaaatgactaaattacccttctaa 13300886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 13311590 - 13311542
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||||| | |||||||||||||||| ||||||||    
T  13311590 aaatgaccaaaatacccctgagttcaaaatgactaaattacccttctaa 13311542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 48422342 - 48422382
Alignment:
Q  47 aaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  48422342 aaaatacccctgagtccaaaatgactaaattacccttctaa 48422382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 11403337 - 11403380
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaataccc 55  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||    
T  11403337 gaaaatactaaattacccttactcacaaaatgactaaattaccc 11403380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 12348780 - 12348729
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  12348780 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 12348729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 12487265 - 12487218
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttc 84  Q
    ||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  12487265 caaaatgaccaaaatacccttgagtccaaaatgactaaattacccttc 12487218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 14081355 - 14081405
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  14081355 cacatataaacacataataaaacaattaaaaataaatctagcgaaaatcgg 14081405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 14304823 - 14304874
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  14304823 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 14304874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 15856752 - 15856713
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaa 75  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  15856752 acaaaatgactaaaatacccctaagtccaaaatgactaaa 15856713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 16181418 - 16181367
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  16181418 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 16181367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 17394105 - 17394144
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaa 75  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  17394105 acaaaatgaccaaaatacccctgaatccaaaatgattaaa 17394144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 50313948 - 50313991
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaataccc 55  Q
    |||| |||||||||||||| |||||||||||||| |||||||||    
T  50313948 gaaattactaaattacccttacttacaaaatgaccaaaataccc 50313991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 14081257 - 14081307
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| |||||||||||   |||||||||||||||||| ||||||||    
T  14081257 caaaatgaccaaaatacccctagttccaaaatgactaaattacccttctaa 14081307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 17102113 - 17102163
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| ||| ||||||||||||| || ||||||||    
T  17102113 caaaatgaccaaaatacccctaaattcaaaatgactaaaatacccttctaa 17102163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 25680203 - 25680122
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaaca--catattaac-aattaaaaataattctagcgaaaa 191  Q
    |||||||| ||||| |||||||| |||||| || ||||||||||||  |||| |||  || |||||||||||||||||||||    
T  25680203 aaaatacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaa 25680122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 25688507 - 25688426
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaaca--catattaac-aattaaaaataattctagcgaaaa 191  Q
    |||||||| ||||| |||||||| |||||| || ||||||||||||  |||| |||  || |||||||||||||||||||||    
T  25688507 aaaatacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaa 25688426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 6146244 - 6146195
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttcta 86  Q
    ||||||||| ||||||||||| | ||||||||||||||| || |||||||    
T  6146244 caaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttcta 6146195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 19659229 - 19659149
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaa 191  Q
    |||||||||||| |  |||||||||||| |||| |||||||||||||| || |  ||| |  |||||||||||||||||||    
T  19659229 aaaatacacacatagacaattaatcacacaaaagcacatataaacacacataataaataattaaaataattctagcgaaaa 19659149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 17955489 - 17955441
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  17955489 aaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 17955441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 38810477 - 38810425
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    ||||||||  ||||||||| ||| | |||||||||||||||| ||||||||||    
T  38810477 caaaatgatcaaaatacccatgagttcaaaatgactaaattacccttctaata 38810425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 55440336 - 55440288
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||| | | |||||||||||||||||| ||||||||    
T  55440336 aaatgaccaaaatacccttaagtccaaaatgactaaattacccttctaa 55440288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 26053 - 26184
Alignment:
Q  61 tccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacaca 160  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  26053 tccaaaatgactaaattacccttctaatctcgaattctaataatccgaaccaaaaatacacacagaggcaattaatcacataaaagcacatataaacaca 26152  T
Q  161 tattaacaattaaaaataattctagcgaaaatc 193  Q
    ||||||||||||| || || |||||||||||||    
T  26153 tattaacaattaagaa-aaatctagcgaaaatc 26184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 6e-43; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 17013179 - 17013048
Alignment:
Q  61 tccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacaca 160  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  17013179 tccaaaatgactaaattacccttctaatctcgaattctaataatccgaaccaaaaatacacacagaggcaattaatcacataaaagcacatataaacaca 17013080  T
Q  161 tattaacaattaaaaataattctagcgaaaatc 193  Q
    ||||||||||||| || || |||||||||||||    
T  17013079 tattaacaattaagaa-aaatctagcgaaaatc 17013048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 26519106 - 26518979
Alignment:
Q  24 ttaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacac 123  Q
    |||||||  ||||||||||||| ||| |||||| |||||||||||||||||| ||  ||||||| | |||||| || ||||||||||| |||||||||||    
T  26519106 ttacccttgcttacaaaatgaccaaattaccccggaatccaaaatgactaaaatactcttctaacaccgaattctactaatcccaact-aaaatacacac 26519008  T
Q  124 agaagcaattaatcacataaaaacacata 152  Q
    ||| ||||||||||||||| |||||||||    
T  26519007 agaggcaattaatcacatagaaacacata 26518979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 31467067 - 31466932
Alignment:
Q  63 caaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacat-ataaacacat 161  Q
    ||||||||| ||| || | |||| ||| |||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||| || || | ||||||||    
T  31467067 caaaatgacgaaaatacctttcttataccgaattctaataattccaaccaaaa-tacacacagaagcaattaatcacataaaagcatataaaaaacacat 31466969  T
Q  162 att-aacaattaaaaataattctagcgaaaatcggac 197  Q
    ||| ||||||||||||||| |||| ||||||||||||    
T  31466968 attaaacaattaaaaataaatctaacgaaaatcggac 31466932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 14672175 - 14672333
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatc 137  Q
    |||||||| ||||||||||||| |  |||||||||||| || |||||||| | | ||||  | |||||||||| |||| |||||||||| ||||||||||    
T  14672175 aaaatgaccaaaatacccctgagtttaaaatgactaaaatagccttctaacaccaaatttcactaatcccaaccaaaa-tacacacagaggcaattaatc 14672273  T
Q  138 acataaaaacacatataaacacatattaacaatta---aaaataattctagcgaaaatcgg 195  Q
    ||||| || |||||||||| ||||| ||| |||||   ||||||| |||| ||||||||||    
T  14672274 acatacaagcacatataaatacata-taaaaattaattaaaataaatctaacgaaaatcgg 14672333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 15514785 - 15514671
Alignment:
Q  47 aaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaa 146  Q
    ||||||||||| | |  |||||||||||| || |||||||| | ||||||  | |||||||||| |||| |||||||||| ||||||||||||||| ||     
T  15514785 aaaatacccctaagtttaaaatgactaaaatacccttctaacaccgaattccactaatcccaaccaaaa-tacacacagaggcaattaatcacatacaag 15514687  T
Q  147 cacatataaacacata 162  Q
    || |||||||||||||    
T  15514686 catatataaacacata 15514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 21410539 - 21410489
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21410539 caaaatgaccaaaatacccctgagtccaaaatgactaaattatccttctaa 21410489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 18629094 - 18629022
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||| ||||||| |||  ||||||||| |||||||| |||| |||||||||||||||||| ||||||||||    
T  18629094 tactaatttacccttactcgcaaaatgaccaaaatacctctgagtccaaaatgactaaattacccttctaata 18629022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 17082581 - 17082517
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  17082581 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 17082517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 22461551 - 22461487
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaaca--attaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  22461551 taatcacacacaagcacatataaacacatattaaaacgattaaaaataattctagcgaaaatcgg 22461487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 21932024 - 21932091
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||| | || ||||||||||||||||||  ||||||||||||||| |||||| ||||||||    
T  21932024 aattaatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcaaaaatcgg 21932091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 33537769 - 33537706
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcg 194  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  33537769 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 33537706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 18506775 - 18506725
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  18506775 cacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 18506725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 23223583 - 23223633
Alignment:
Q  144 aaacacatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  23223583 aaacacatataaacacatattaaaacaattaaaaataattctaacgaaaat 23223633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 13014194 - 13014140
Alignment:
Q  33 cttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  13014194 cttacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 13014140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 25654895 - 25654945
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  25654895 caaaataaccaaaatacccctgagtccaaaatgactaaattacccttctaa 25654945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 33537854 - 33537804
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| | ||||||||||||||| |||||||||    
T  33537854 caaaatgaccaaaatacccctgagttcaaaatgactaaattgtccttctaa 33537804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 25654979 - 25655043
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| |||||| ||||||||    
T  25654979 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcaaaaatcgg 25655043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 116509 - 116446
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcg 194  Q
    |||||||| | || ||| ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  116509 taatcacacacaagcacgtataaacacgtattaaaacaattaaaaataattctagcgaaaatcg 116446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 29157890 - 29157847
Alignment:
Q  154 aaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  29157890 aaacacatattaaaacaattaaaaataattctagcgaaaatcgg 29157847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 18399720 - 18399771
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  18399720 acaaaatgacaaaaatacccctaagtccaaaatgactaaaatacccttctaa 18399771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 18584084 - 18584135
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  18584084 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 18584135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 23148742 - 23148793
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| |||| |||||||||||| || ||||||||    
T  23148742 acaaaatgaccaaaatacccctaaatctaaaatgactaaaatacccttctaa 23148793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 25633205 - 25633154
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  25633205 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 25633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 32352830 - 32352880
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  ||||||||||||| | |||||||||||||    
T  32352830 cacatataaacacatattaaaacaattaaaaataaatatagcgaaaatcgg 32352880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 32899569 - 32899620
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  32899569 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 32899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 15004346 - 15004289
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcga 188  Q
    |||||||| | || ||||||||||||||||||  ||||||||||||||| ||||||||    
T  15004346 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcga 15004289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 17547111 - 17547050
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    |||||||| | || ||||||||| ||||||||||  ||||||||||||| ||||||||||||    
T  17547111 taatcacacacaagcacatataagcacatattaaaacaattaaaaataaatctagcgaaaat 17547050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 35135500 - 35135450
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| | ||||||||||||| |||| ||||||||    
T  35135500 caaaatgaccaaaatacccctaattccaaaatgactatattacccttctaa 35135450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 22582201 - 22582137
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| || |||||| |||||||||||  || |||||| ||||| |||||||||||||||    
T  22582201 taatcacatacaagcacataaaaacacatattaaaagaattaagaataaatctagcgaaaatcgg 22582137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 22584991 - 22584927
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| || |||||| |||||||||||  || |||||| ||||| |||||||||||||||    
T  22584991 taatcacatacaagcacataaaaacacatattaaaagaattaagaataaatctagcgaaaatcgg 22584927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 22589822 - 22589758
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| || |||||| |||||||||||  || |||||| ||||| |||||||||||||||    
T  22589822 taatcacatacaagcacataaaaacacatattaaaagaattaagaataaatctagcgaaaatcgg 22589758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 25743959 - 25743906
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||||||| ||||||| | | ||||||||||||||||| || ||||||||||    
T  25743959 acaaaatgaccaaaatacacttaaatccaaaatgactaaaatacccttctaata 25743906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 14355780 - 14355863
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaatcg 194  Q
    |||||||||||||| ||||| ||||||| | || |||||||||||||| || |  ||| |  ||||||||| ||||||||||||    
T  14355780 aaaatacacacagaggcaatcaatcacacacaagcacatataaacacacataataaataattaaaataattttagcgaaaatcg 14355863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 15889153 - 15889106
Alignment:
Q  150 atataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||| |||||||||||  |||||||||||||||||| ||||||||||    
T  15889153 atatacacacatattaaaacaattaaaaataattctaacgaaaatcgg 15889106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 22848870 - 22848917
Alignment:
Q  147 cacatataaacacatatt--aacaattaaaaataattctagcgaaaat 192  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||    
T  22848870 cacatataaacacatattaaaacaattaaaaataaatctaacgaaaat 22848917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 31159797 - 31159718
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatat-aaacacatattaacaattaaaaataattctagcgaaaat 192  Q
    |||||||||||| ||||||||||||||||| || || |||| ||||||| |  ||||||| ||||||| |||| |||||||    
T  31159797 aaaatacacacataagcaattaatcacatacaagcatatataaaacacacaaaaacaatt-aaaataaatctaacgaaaat 31159718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 13525 - 13680
Alignment:
Q  40 aatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcac 139  Q
    |||||| ||||||||||||| |||||||||| ||||||| ||||||||| ||||||| ||||||||||||| |||||| |||||||| ||||||||||||    
T  13525 aatgaccaaaatacccctgagtccaaaatgattaaattacccttctaatgtcgaattctaataatcccaaccaaaaatgcacacagaggcaattaatcac 13624  T
Q  140 ataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatc 193  Q
    |||||| ||||||| ||| | ||||  ||||||||||||||| |||||| ||||||    
T  13625 ataaaagcacatatcaacgcgtattaaaacaattaaaaataaatctagcaaaaatc 13680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 192
Target Start/End: Complemental strand, 54362776 - 54362622
Alignment:
Q  40 aatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcac 139  Q
    |||||| ||||||| | ||| || ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  54362776 aatgaccaaaatactcttgattcaaaaatgactaaattacccttctaataccgaattctaataatcccaaccaaaaatacacacagaggcaattaatcac 54362677  T
Q  140 ataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaat 192  Q
    |||||| ||||||| ||||  ||||  || |||||||||||| ||||||||||||    
T  54362676 ataaaagcacatatcaacatgtattaaaataattaaaaataaatctagcgaaaat 54362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 9652649 - 9652797
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaact 111  Q
    |||| |||||| |||||||  || ||| |||||| ||||||||||| ||| |||| |||||||| || |||||||| | ||||||  ||||||| ||||     
T  9652649 gaaattactaatttacccttgctcacacaatgaccaaaatacccctaaattcaaa-tgactaaaatacccttctaacaccgaattccaataatctcaacc 9652747  T
Q  112 aaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
    |||| ||||||||||  |||||| |||||||||| ||||||||||||||||    
T  9652748 aaaa-tacacacagagacaattagtcacataaaagcacatataaacacata 9652797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 41255877 - 41255810
Alignment:
Q  22 aattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    ||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  41255877 aattacccttactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaata 41255810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 15213020 - 15212953
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||| | || ||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  15213020 aattaatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 15212953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 13589512 - 13589462
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  13589512 cacatataaacacatattaaaacaattaaaaataattctagcgaaaatcgg 13589462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 23269403 - 23269352
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  23269403 acaaaatgaccaaaatacccctaaatccaaaatgactaaattacccttctaa 23269352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 15045588 - 15045638
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  15045588 caaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 15045638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 15108836 - 15108786
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  15108836 caaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 15108786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 40885049 - 40884979
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| ||| | |||||||| ||||||||||||| |||||||||||||||||| | ||||||    
T  40885049 tactaatttacccttactcataaaatgaccaaaatacccctgagtccaaaatgactaaattacctttctaa 40884979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 41916187 - 41916135
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  41916187 cacatataaacacatattaaaacaattaaaaataattctagcaaaaatcggac 41916135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 47467779 - 47467715
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  47467779 taatcacacacaagcacataaaaacacatattaaaacaattaaaaataattctagcgaaaatcgg 47467715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 7185268 - 7185206
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatc 193  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  7185268 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatc 7185206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 10375338 - 10375388
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  10375338 cacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgg 10375388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 15012793 - 15012726
Alignment:
Q  22 aattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    ||||||||| ||  |||||||||| |||||||||| || || ||||||||||||||| ||||||||||    
T  15012793 aattacccttacccacaaaatgaccaaaatacccccgagtctaaaatgactaaattacccttctaata 15012726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 34177132 - 34177086
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatcctt 83  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  34177132 caaaatgaccaaaatacccctgagtccaaaatgactaaattaccctt 34177086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15213102 - 15213057
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccct 57  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||    
T  15213102 gaaattactaaattacccttacttacaaaatgaccaaaatacccct 15213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 49072524 - 49072571
Alignment:
Q  150 atataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||    
T  49072524 atataaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 49072571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 13722566 - 13722515
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  13722566 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 13722515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 19560094 - 19560137
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaataccc 55  Q
    |||| |||||||||||||| |||||||||||||| |||||||||    
T  19560094 gaaattactaaattacccttacttacaaaatgaccaaaataccc 19560137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 44056694 - 44056745
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  44056694 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 44056745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 13247192 - 13247242
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||||||||||| | || |||||||||||||| || ||||||||    
T  13247192 caaaatgactaaaatacccttaaaaccaaaatgactaaaatacccttctaa 13247242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 15012693 - 15012631
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| || |||||| ||||| || | ||||||||||||||| |||| ||||||||||    
T  15012693 taatcacatacaagcacataaaaacatatttaaacaattaaaaataaatctaacgaaaatcgg 15012631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 14901989 - 14902038
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| | |||||||| || |||||||||||||||||| ||||||||    
T  14901989 aaaatgaccataatacccccgagtccaaaatgactaaattacccttctaa 14902038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 30231891 - 30231839
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    |||||||||||||||| |||  ||||||||||||| ||||| |||||||||||    
T  30231891 cacatataaacacataataaaacaattaaaaataaatctagtgaaaatcggac 30231839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 47534543 - 47534494
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||  ||||||||||||  |||||||||||||||||| ||||||||    
T  47534543 aaaatgatcaaaatacccctgggtccaaaatgactaaattacccttctaa 47534494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 50219387 - 50219336
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    ||||||||||||| ||||||  ||||||||| |||||||||||||||||||||    
T  50219387 cacatataaacacgtattaaaacaattaaaa-taattctagcgaaaatcggac 50219336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 16732950 - 16732998
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttc 84  Q
    |||||||||| ||||||||||| | ||||||||||||||| || |||||    
T  16732950 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttc 16732998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 18277220 - 18277287
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||| ||  ||| ||||||||||| |||  ||||||||||||| |||||| ||||||||    
T  18277220 aattaatcacatacaagtacaaataaacacataataaaacaattaaaaataaatctagcaaaaatcgg 18277287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 18493601 - 18493561
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaatta 78  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  18493601 aaaatgaccaaaatacccttgagtccaaaatgactaaatta 18493561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 195
Target Start/End: Complemental strand, 12211 - 12056
Alignment:
Q  40 aatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcac 139  Q
    |||||| | |||||||| || ||||||||||||||| || |||||||| |||||||| |||||||| | || |||| |||||||||| ||||||||||||    
T  12211 aatgaccataatacccc-gagtccaaaatgactaaaatacccttctaacatcgaattctaataatcgccaccaaaa-tacacacagaggcaattaatcac 12114  T
Q  140 ataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    ||| || ||||||| ||||| ||||  ||||||||||||||| |||| ||||||||||    
T  12113 atataagcacatatcaacacgtattaaaacaattaaaaataaatctaacgaaaatcgg 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 4485472 - 4485604
Alignment:
Q  63 caaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
    ||||||||| | | || |||||| ||| |||||| ||||||||||||| |||| |||||||||| |||||||||||||||||| || ||| |||||||||    
T  4485472 caaaatgaccacaatacccttcttataccgaattctaataatcccaaccaaaa-tacacacagaggcaattaatcacataaaagcatataaaaacacata 4485570  T
Q  163 t-taacaattaaaaataattctagcgaaaatcgg 195  Q
    |  ||||||| |||| || |||||||||||||||    
T  4485571 taaaacaatttaaaacaaatctagcgaaaatcgg 4485604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 12193059 - 12193207
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaact 111  Q
    |||| |||||| |||||||  || ||| |||||| ||||||||||| | ||||||||||||||| || |||| ||| | |||||| |||||| || |||     
T  12193059 gaaattactaatttacccttgctcacacaatgaccaaaatacccctaactccaaaatgactaaaataccctt-taacaccgaattctaataacccgaacc 12193157  T
Q  112 aaaaatacacacagaagcaattaatcacataaaaacacatataaacacata 162  Q
    |||| |||| ||||| ||||||||||||||| |  ||||||||||||||||    
T  12193158 aaaa-tacatacagaggcaattaatcacatacatgcacatataaacacata 12193207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 38424826 - 38424896
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||| ||| ||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  38424826 tactaatttatccttactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 38424896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 9723245 - 9723195
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  9723245 cacatataaacacatattaaaacaattaaaaataattctagcgaaaatcgg 9723195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 31501914 - 31501977
Alignment:
Q  24 ttaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||| |||||||||| ||||||||||||| || ||||||||||||||| ||||||||    
T  31501914 ttacccttactcacaaaatgaccaaaatacccctgagtctaaaatgactaaattacccttctaa 31501977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 45150389 - 45150443
Alignment:
Q  144 aaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgga 196  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  45150389 aaacacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgga 45150443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 9612071 - 9612123
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    ||||||||| ||||||||||||| ||||||||||||||||||  |||||||||    
T  9612071 caaaatgaccaaaatacccctgagtccaaaatgactaaattactcttctaata 9612123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 9839642 - 9839694
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    ||||||||| ||||||||||||| ||||||||||||||||||  |||||||||    
T  9839642 caaaatgaccaaaatacccctgagtccaaaatgactaaattactcttctaata 9839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 45146179 - 45146242
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcg 194  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  45146179 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 45146242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 11288196 - 11288247
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| |||||||||||||||| ||| ||||||||    
T  11288196 acaaaatgaccaaaatacccctaaatccaaaatgactaagttacccttctaa 11288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 33560476 - 33560526
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  33560476 cacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 33560526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 13275536 - 13275586
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  13275536 caaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 13275586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 21675180 - 21675119
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    |||||||| | || |||||||||||||| |||||  ||||||||||||||||||||||||||    
T  21675180 taatcacacacaagcacatataaacacacattaaaacaattaaaaataattctagcgaaaat 21675119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 9251254 - 9251318
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| ||||| |||||||  |||||||||||||||||||||||||||||    
T  9251254 taatcacacacaagcacataaaaacatatattaaaacaattaaaaataattctagcgaaaatcgg 9251318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 34240709 - 34240640
Alignment:
Q  18 actaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||| ||||||| || | ||||||||| |||||||| |||| || ||||||||||||||| ||||||||    
T  34240709 actaatttacccttacatccaaaatgaccaaaatacctctgagtctaaaatgactaaattacccttctaa 34240640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 16914389 - 16914322
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| || || |||| ||||||||||| |||  ||||||||||||| |||||||||||||||    
T  16914389 aattaatcacgtacaagcacaaataaacacataataaaacaattaaaaataaatctagcgaaaatcgg 16914322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 3060696 - 3060747
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  3060696 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 3060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 12247584 - 12247537
Alignment:
Q  40 aatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  12247584 aatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 12247537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 13321765 - 13321816
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||||||||||||| | | ||||||||||||||| || ||||||||    
T  13321765 acaaaatgactaaaatacccttaagtccaaaatgactaaaatacccttctaa 13321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 14419706 - 14419655
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  14419706 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 14419655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 13275635 - 13275684
Alignment:
Q  147 cacatataaacacata--ttaacaattaaaaataattctagcgaaaatcg 194  Q
    ||||||||||||||||  | ||||||||||||||| ||||||||||||||    
T  13275635 cacatataaacacataaataaacaattaaaaataaatctagcgaaaatcg 13275684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 18078927 - 18078889
Alignment:
Q  156 acacatattaacaattaaaaataattctagcgaaaatcg 194  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  18078927 acacataaaaacaattaaaaataattctagcgaaaatcg 18078889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 9318995 - 9318931
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| ||||| |||||||  |||||||||||||||||||| ||||||||    
T  9318995 taatcacacacaagcacataaaaacatatattaaaacaattaaaaataattctagctaaaatcgg 9318931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 17923218 - 17923259
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatac 53  Q
    |||| |||||||||||||| |||||||||||||| |||||||    
T  17923218 gaaattactaaattacccttacttacaaaatgaccaaaatac 17923259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 17923282 - 17923366
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||| |  ||||||||||||||  | || | ||||||||| |||||  ||||||||| ||| |||||||||||||||    
T  17923282 aaaatacacacatagacaattaatcacatacgagcataaataaacacacattaaaacaattaaaattaaatctagcgaaaatcgg 17923366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 20583013 - 20582949
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| |||||||||||||  ||||||||||||| ||||||||| |||||    
T  20583013 taatcacacacaagcacataaaaacacatattaaaacaattaaaaataaatctagcgaatatcgg 20582949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 26069083 - 26069034
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  26069083 aaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 26069034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 26069741 - 26069692
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  26069741 aaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 26069692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 26093528 - 26093479
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  26093528 aaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 26093479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 31502032 - 31502075
Alignment:
Q  154 aaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||  ||||||||||||| |||||||||||||||    
T  31502032 aaacacatattaaaacaattaaaaataaatctagcgaaaatcgg 31502075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 24885402 - 24885472
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  24885402 tactaatttacccttactcacaaaatgactaaaatacccctgagtccaaaatgactaaattacccttctaa 24885472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 6095467 - 6095535
Alignment:
Q  129 caattaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||  | |||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  6095467 caattaatcacgcacaaacacatataaacacatattaaaacaatttaaaataattctagcgaaaatcgg 6095535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 723148 - 723198
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  723148 caaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 723198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45572907 - 45572825
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45572907 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45572825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45576574 - 45576492
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45576574 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45576492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45580241 - 45580159
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45580241 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45583908 - 45583826
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45583908 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45583826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45587575 - 45587493
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45587575 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45587493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45591242 - 45591160
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45591242 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45591160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45594909 - 45594827
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45594909 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45594827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45598576 - 45598494
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45598576 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45602243 - 45602161
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45602243 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45602161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45605910 - 45605828
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45605910 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45605828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45609577 - 45609495
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45609577 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45609495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45613244 - 45613162
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45613244 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45613162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 45616911 - 45616829
Alignment:
Q  81 cttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
    ||||||| | |||||| |||| ||||| || ||||||||||| ||| |||||||||||||||  | |||||||||||||||||    
T  45616911 cttctaacaccgaattctaatgatccccaccaaaaatacacatagaggcaattaatcacatacgagcacatataaacacatat 45616829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 11010515 - 11010563
Alignment:
Q  148 acatataaacacatatt-aacaattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  11010515 acatataaacacatattgaacaattaaaaataatcctagcgaaaatcgg 11010563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 19433294 - 19433246
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  19433294 aaatgacaaaaatacccctgagtccaaaatgactaaattacccttctaa 19433246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 24086919 - 24086867
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    ||||||| | ||||||||||||| |||||||||||||||||| ||||||||||    
T  24086919 caaaatgtccaaaatacccctgagtccaaaatgactaaattacccttctaata 24086867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 31145645 - 31145594
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  31145645 acaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 31145594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 9638237 - 9638286
Alignment:
Q  148 acatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  9638237 acatataaacacatattaaaacaattaaaaataattttagcgaaaatcgg 9638286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 16446488 - 16446558
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| ||| |||||||||| |||||||| || | || ||||||||||||||| ||||||||    
T  16446488 tactaatttacccttactcacaaaatgaccaaaatacctcttagtctaaaatgactaaattacccttctaa 16446558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 23821271 - 23821221
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  23821271 caaaattaccaaaatacccctgagtccaaaatgactaaattacccttctaa 23821221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 23830350 - 23830300
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  23830350 caaaattaccaaaatacccctgagtccaaaatgactaaattacccttctaa 23830300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 43646705 - 43646767
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||||||||||||   ||||||||||||||| |||||||||||||||    
T  43646705 taatcacacacaagcacatataaacacattaaaacaattaaaaataaatctagcgaaaatcgg 43646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 7322290 - 7322331
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaatta 78  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  7322290 caaaatgaccaaaatacccctgagtccaaaatgactaaatta 7322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 19667389 - 19667456
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||| | || ||||||||| ||||||||||  ||| ||||||||| |||||||||||||||    
T  19667389 aattaatcacacacaagcacatataagcacatattaaaacaagtaaaaataaatctagcgaaaatcgg 19667456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 24293989 - 24293949
Alignment:
Q  47 aaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  24293989 aaaatacccctgagtccaaaatgactaaattacccttctaa 24293949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 723231 - 723297
Alignment:
Q  131 attaatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| | || ||||||||||||| || |||  ||||||||||||| |||||||||||||||    
T  723231 attaatcacacacaagcacatataaacacgtaataaaacaattaaaaataaatctagcgaaaatcgg 723297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 191
Target Start/End: Original strand, 20510994 - 20511147
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatca 138  Q
    ||||||| |||||||||||||||| ||||||||| || || |||||  |  || ||||  | ||||| | | ||||| ||| ||| ||  ||||||||||    
T  20510994 aaatgaccaaaatacccctgaatctaaaatgacttaaatacccttcctaagtcaaattccactaatctcgaataaaa-tacgcaccgagacaattaatca 20511092  T
Q  139 cataaaaacacatataaac--acatattaacaattaaaaataattctagcgaaaa 191  Q
    |||| ||||||||||||||  ||||| |||  | | |||||||||||||||||||    
T  20511093 catacaaacacatataaacatacataataaataattaaaataattctagcgaaaa 20511147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 42535384 - 42535435
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  42535384 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 42535435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 25595839 - 25595899
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaat 192  Q
    |||||||| | ||||| |||||||||||||||  ||||||| ||||||||||||||||||||    
T  25595839 taatcacacataaacagatataaacacatattaaaacaatt-aaaataattctagcgaaaat 25595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 24278593 - 24278641
Alignment:
Q  148 acatataaacacatattaa--caattaaaaataattctagcgaaaatcg 194  Q
    ||||| |||||||||||||  |||||||||||||||| |||||||||||    
T  24278593 acataaaaacacatattaaaacaattaaaaataattcaagcgaaaatcg 24278641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 19668609 - 19668561
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||| | | |||||||||||||||| ||||||||    
T  19668609 aaatgaccaaaatacccctaagttcaaaatgactaaattacccttctaa 19668561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 24885526 - 24885573
Alignment:
Q  150 atataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  24885526 atataaacacataataaaacaattaaaaataaatctagcgaaaatcgg 24885573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 25875403 - 25875355
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  25875403 aaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 25875355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 13913 - 14013
Alignment:
Q  62 ccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacat 161  Q
    |||||||||||||| || |||| ||| | |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| || |||||||||||| ||    
T  13913 ccaaaatgactaaaatacccttttaacaccgaattctaataatcccaaccaaaa-tacacacagaggcaattaatcacatagaagcacatataaacatat 14011  T
Q  162 at 163  Q
    ||    
T  14012 at 14013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 496 - 422
Alignment:
Q  13 aaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||| | ||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  496 aaaatactaatttaccgttactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 27232605 - 27232535
Alignment:
Q  13 aaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatcctt 83  Q
    |||||||||| ||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  27232605 aaaatactaatttacccttactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattaccctt 27232535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 18260987 - 18260912
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||| |||||||||||||| ||||||||||||||  |||||||| ||| ||||||||||||||||||  |||||||    
T  18260987 gaaattactaaattacccttacttacaaaatgaccgaaatacccttgagtccaaaatgactaaattactcttctaa 18260912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 23223402 - 23223338
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaat 192  Q
    ||||||||||| |||| ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  23223402 aattaatcacacaaaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaat 23223338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 33610537 - 33610467
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||  ||||||||| ||||||||| ||| |||||||||||||||||| ||||||||    
T  33610537 tactaatttacccttactcgcaaaatgaccaaaatacccatgagtccaaaatgactaaattacccttctaa 33610467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 23151331 - 23151262
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttcta 86  Q
    |||||| |||||||  || || ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  23151331 tactaatttacccttgctcactaaatgaccaaaatacccctgagtccaaaatgactaaattacccttcta 23151262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 24625617 - 24625701
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||  ||| |||||||||| || ||||||||||||||||| |  ||| |  |||||||||||||||||||||||    
T  24625617 aaaatacacacagagacaaataatcacatacaagcacatataaacacatataataaataaataaaataattctagcgaaaatcgg 24625701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 17502976 - 17503036
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa-caattaaaaataattctagcgaaaat 192  Q
    |||||||| |||| |||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  17502976 taatcacacaaaagcacataaaaacacatattaaacaattaaaaataaatctagcgaaaat 17503036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 31590819 - 31590866
Alignment:
Q  148 acatataaacacatattaa--caattaaaaataattctagcgaaaatc 193  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  31590819 acatataaacacatattaaaacaattaaaaataattctagcgaaaatc 31590866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 18040976 - 18040926
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  18040976 cacatataaatacatattaaaacaattaaaaataattctagcgaaaatcgg 18040926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 21681761 - 21681812
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  21681761 acaaaatgacaaaaatacccctaagtccaaaatgactaaattacccttctaa 21681812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 33173029 - 33173079
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  33173029 cacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgg 33173079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 29307180 - 29307250
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||  ||||||||| ||||||||| ||| ||||||||||||||||||  |||||||    
T  29307180 tactaatttacccttactcccaaaatgaccaaaatacccttgagtccaaaatgactaaattactcttctaa 29307250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 33529189 - 33529235
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatcctt 83  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  33529189 caaaatgaccaaaatacccctgagtccaaaatgactaaattaccctt 33529235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 39446232 - 39446182
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||    
T  39446232 caaaatgaccaaaatacccctgagtccaaaatgactaaattaccctactaa 39446182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 22496644 - 22496612
Alignment:
Q  165 aacaattaaaaataattctagcgaaaatcggac 197  Q
    |||||||||||||||||||||||||||||||||    
T  22496644 aacaattaaaaataattctagcgaaaatcggac 22496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 33610432 - 33610369
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcg 194  Q
    |||||||| | || || |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  33610432 taatcacacacaagcatatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 33610369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 11600932 - 11600975
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaataccc 55  Q
    |||| |||||||||||||| |||||||||||||| |||||||||    
T  11600932 gaaattactaaattacccttacttacaaaatgacaaaaataccc 11600975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 20496312 - 20496265
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttct 85  Q
    |||||||||||||||||||| |||| |||||||||||| || ||||||    
T  20496312 aaaatgactaaaatacccctaaatctaaaatgactaaaatacccttct 20496265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 20653501 - 20653450
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  20653501 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 20653450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 22982049 - 22982100
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | |||||||||||||||||| | ||||||    
T  22982049 acaaaatgaccaaaatacccctaagtccaaaatgactaaattacctttctaa 22982100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 23218683 - 23218732
Alignment:
Q  147 cacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  23218683 cacatataaacacatattaaaacaattaaaaataa-tctagcgaaaatcgg 23218732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 45464547 - 45464501
Alignment:
Q  148 acatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  45464547 acatataaacacatattaaaacaattaaaaataaatctagcgaaaat 45464501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 23158919 - 23158989
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||  ||||||||| || |||||||| | || ||||||||||||||| ||||||||    
T  23158919 tactaatttacccttactcgcaaaatgaccaatatacccctaagtctaaaatgactaaattacccttctaa 23158989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 23350912 - 23350982
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||   |||||||| |||||| || |||||||||||||||||||| | ||||||||    
T  23350912 tactaatttacccttactcgtaaaatgaccaaaatatccttgaatccaaaatgactaaatcacccttctaa 23350982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 25297006 - 25297071
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaatt-aaaaataattctagcgaaaatcgg 195  Q
    |||||||| | ||||||||||||||||||| |  ||||||| |||||||| |||||||||||||||    
T  25297006 taatcacacacaaacacatataaacacataataaaacaattaaaaaataaatctagcgaaaatcgg 25297071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 25759026 - 25759091
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaatt-aaaaataattctagcgaaaatcgg 195  Q
    |||||||| | ||||||||||||||||||| |  ||||||| |||||||| |||||||||||||||    
T  25759026 taatcacacacaaacacatataaacacataataaaacaattaaaaaataaatctagcgaaaatcgg 25759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 33529284 - 33529337
Alignment:
Q  144 aaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||||||||||  |||||||| |||||| | |||||||||||||    
T  33529284 aaacacatataaacacatattaaaacaattataaataaatatagcgaaaatcgg 33529337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 22314878 - 22314962
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||| | |||||||||||||||  | || | ||||||||| |||  ||||||||||| ||| |||||| ||||||||    
T  22314878 aaaatacacacataggcaattaatcacatacgagcataaataaacacacattaaaacaattaaaattaaatctagcaaaaatcgg 22314962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 23225631 - 23225582
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||| || ||||||||||||| |||||||| ||||||||| ||||||||    
T  23225631 aaaataaccaaaatacccctgagtccaaaataactaaattacccttctaa 23225582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 23351017 - 23351081
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||| ||||| ||||||||||  ||||||||||||| |||||||||||||||    
T  23351017 taatcacacacaagcacttataaccacatattaaaacaattaaaaataaatctagcgaaaatcgg 23351081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 38534433 - 38534482
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| | ||||||||| ||| |||||||||||||||||| ||||||||    
T  38534433 aaaatggccaaaatacccatgagtccaaaatgactaaattacccttctaa 38534482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 39446132 - 39446084
Alignment:
Q  146 acacatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||    
T  39446132 acacatataaacacataataaaacaattaaaaataaatctagcgaaaat 39446084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 41506308 - 41506244
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||| | || |||| |||||||||||  || ||||||||||||||||| ||||||||||    
T  41506308 aattaatcacacacaagcacaaataaacacataa-aataattaaaaataattctaacgaaaatcgg 41506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 15934036 - 15934103
Alignment:
Q  130 aattaatcacataaaaacacatataaacacatattaaca--attaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||| ||||  ||||| ||||||||| ||| |  ||||||||||| |||||||||||||||    
T  15934036 aattaatcacacaaaagtacataaaaacacataataaaataattaaaaataaatctagcgaaaatcgg 15934103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 24552014 - 24551967
Alignment:
Q  147 cacatataaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||||||   ||||||||||||||| |||||||||||||||    
T  24552014 cacatataaacacattaaaacaattaaaaataa-tctagcgaaaatcgg 24551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 11729 - 11875
Alignment:
Q  18 actaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaat 117  Q
    ||||| |||||||  || |||||||||| ||||||||| ||| || |||| ||||||| || |||||||| | |||| | || |||||||||| |||| |    
T  11729 actaatttacccttgctcacaaaatgaccaaaatacccttgagtctaaaa-gactaaaatagccttctaacaccgaaatctactaatcccaaccaaaa-t 11826  T
Q  118 acacacagaagcaattaatcacataaaaacacatataaacacatattaa 166  Q
    ||||||| | ||||||||||||||  || || |||||||||||||||||    
T  11827 acacacaaaggcaattaatcacatttaagcagatataaacacatattaa 11875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 80300 - 80370
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| ||| | |||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  80300 tactaatttacccttactaaaaaaatgaccaaaatacccttgagtccaaaatgactaaattatccttctaa 80370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 5284 - 5205
Alignment:
Q  80 ccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacaca 160  Q
    |||||||||| |||||| || |||||||||| |||| |||||||||| ||||||||||||| | || ||||||||||||||    
T  5284 ccttctaataccgaattctactaatcccaaccaaaa-tacacacagaggcaattaatcacaaacaagcacatataaacaca 5205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 89373 - 89305
Alignment:
Q  19 ctaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||| ||||||  ||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  89373 ctaatttacccgtactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 89305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 6457340 - 6457412
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||| ||||||| ||| |||||||||| ||||||||||||| |  ||||||||||||||| ||||||||||    
T  6457340 tactaatttacccttactcacaaaatgaccaaaatacccctgagtaaaaaatgactaaattacccttctaata 6457412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 37984127 - 37984177
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  37984127 caaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 37984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 11966137 - 11966189
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  11966137 cacatataaacacatattaaaacaattaaaaataattctagtgaaaatcggac 11966189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 37984212 - 37984276
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  37984212 taatcacacataagcacatataaacacatatttaaacaattaaaaataaatctagcgaaaatcgg 37984276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 22662180 - 22662125
Alignment:
Q  32 acttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||| ||||||||| ||||||||||| | ||||||||||||||| |||||||||||    
T  22662180 acttccaaaatgaccaaaatacccctaagtccaaaatgactaaaatatccttctaa 22662125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 433214 - 433264
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| | ||||||    
T  433214 caaaatgaccaaaatacccctgagtccaaaatgactaaattaccattctaa 433264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 3674646 - 3674696
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||  ||| |||||||||||||||||||||||||||    
T  3674646 caaaatgaccaaaataccattgagtccaaaatgactaaattatccttctaa 3674696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 5450304 - 5450254
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||||||    
T  5450304 caaaatgaccaaaataccctttaatccaaaatgactaaattacccttctaa 5450254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 7729203 - 7729253
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||||||||    
T  7729203 caaaatgaccaaaatacctctgagtccaaaatgactaaattacccttctaa 7729253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 10176081 - 10176023
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaa 191  Q
    |||||||||| ||||||||||||||||||| |||  | | |||||||||||||||||||    
T  10176081 taatcacatacaaacacatataaacacataataaataattaaaataattctagcgaaaa 10176023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 19315910 - 19315848
Alignment:
Q  13 aaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaa 75  Q
    |||||||||| |||||||  || || ||||||| ||||||||| |||||||||||||||||||    
T  19315910 aaaatactaatttaccctttctcactaaatgaccaaaatacccttgaatccaaaatgactaaa 19315848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 19874550 - 19874611
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaat 192  Q
    |||||||| | |||||||||||||||||||||  || ||||||||||||||| |||||||||    
T  19874550 taatcacacacaaacacatataaacacatattaaaataattaaaaataattccagcgaaaat 19874611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 28902976 - 28903026
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  28902976 caaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 28903026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 28939371 - 28939421
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  28939371 caaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 28939421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 3674745 - 3674797
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||||||||||    
T  3674745 cacatataaacacataataaaacaattaaaaataaatctagcgaaaatcggac 3674797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 19406317 - 19406368
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| |||||||| || | |||||||||||||||||| ||||||||    
T  19406317 acaaaatgaccaaaatacctctaagtccaaaatgactaaattacccttctaa 19406368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 23233951 - 23233905
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaa 191  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||    
T  23233951 cacatataaacacatattaaaacaattaaaaataattctaacgaaaa 23233905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 23418102 - 23418152
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  23418102 cacatataaacacatattaaaacaattaaaaataattttagcaaaaatcgg 23418152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 23515305 - 23515356
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  23515305 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 23515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 24182604 - 24182553
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  24182604 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 24182553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 19315860 - 19315822
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaa 75  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  19315860 caaaatgactaaaatacccatgagtccaaaatgactaaa 19315822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 21110579 - 21110628
Alignment:
Q  148 acatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  21110579 acatataaacacataataaaacaattaaaaataaatctagcgaaaatcgg 21110628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 23467215 - 23467261
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatcctt 83  Q
    ||||||||| ||||||||| ||| |||||||||||||||||| ||||    
T  23467215 caaaatgaccaaaatacccatgagtccaaaatgactaaattaccctt 23467261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 6457445 - 6457508
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| |||||||||||||  |||||||||||||||||| ||||||||||    
T  6457445 taatcacacacaagcacata-aaacacatattaaaacaattaaaaataattctaacgaaaatcgg 6457508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 16596340 - 16596404
Alignment:
Q  135 atcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcggac 197  Q
    |||||| | |||||||||||||||| ||||  |||| |||||||||| |||||| ||||||||||    
T  16596340 atcacacacaaacacatataaacacgtattaaaacagttaaaaataaatctagcaaaaatcggac 16596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 21397867 - 21397920
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||||||| ||||||||||| | | ||||||||||||| || ||||||||||    
T  21397867 acaaaatgaccaaaatacccctaagttcaaaatgactaaaatacccttctaata 21397920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 24516763 - 24516808
Alignment:
Q  112 aaaaatacacacagaagcaattaatcacataaaaacacatataaac 157  Q
    |||||||||||||||  |||||||||||||| || |||||||||||    
T  24516763 aaaaatacacacagagacaattaatcacatacaagcacatataaac 24516808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 16596255 - 16596295
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaatta 78  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  16596255 aaaatgaccaaaatacccctgagtctaaaatgactaaatta 16596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 20726510 - 20726438
Alignment:
Q  13 aaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttct 85  Q
    |||| ||||| |||||||  || |||||||||| |||||||||||||  | |||||||||||| || ||||||    
T  20726510 aaaagactaatttacccttgctgacaaaatgaccaaaatacccctgagactaaaatgactaaaatacccttct 20726438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 21215869 - 21215810
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaa 190  Q
    |||||||| | || |||||| |||||||||||||  ||||||||||||| ||||||||||    
T  21215869 taatcacacacaagcacataaaaacacatattaaaacaattaaaaataaatctagcgaaa 21215810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 2364 - 2314
Alignment:
Q  144 aaacacatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  2364 aaacacatataaacacatattaaaacaattaaaaataattctagcgaaaat 2314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 67417 - 67351
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  67417 taatcacacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcggac 67351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 132548 - 132614
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatcctt 83  Q
    |||||| ||| ||| ||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||    
T  132548 tactaatttatccttactcacaaaatgaccaaaatacccatgagtccaaaatgactaaattaccctt 132614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 2270 - 2141
Alignment:
Q  33 cttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaat 132  Q
    ||||| ||||||| | |||| |||||| || ||||||||||||||| | |||||| | |||| |  | |||| ||||| |||| ||||||||||  ||||    
T  2270 cttacgaaatgaccagaataaccctgagtctaaaatgactaaattaccattctaacaccgaaatccactaatgccaacgaaaa-tacacacagagacaat 2172  T
Q  133 taatcacataaaaacacatataaacacatat 163  Q
    |||||||||| || |||||||||||| ||||    
T  2171 taatcacatataagcacatataaacatatat 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 21899 - 21829
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||  | ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  21899 tactaatttacccttactcgccaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 21829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 87173 - 87235
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | ||||||||| ||||||||   |||||||||||||||||||||||||||||||    
T  87173 taatcacacacaaacacataaaaacacattaaaacaattaaaaataattctagcgaaaatcgg 87235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 370774 - 370694
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacat---attaacaattaaaaataattctagcgaaaa 191  Q
    |||||||||||||   |||||||||||| | |||||| |||||||||||   || ||||||| |||||||||||||||||||    
T  370774 aaaatacacacagggacaattaatcacacataaacacgtataaacacatataataaacaatt-aaaataattctagcgaaaa 370694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 36355756 - 36355706
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  36355756 caaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaa 36355706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 49996792 - 49996722
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| |||| || ||| |||||||| | ||||||||||||| |||||||||||||||||| ||||||||    
T  49996792 tactaatttactcttactcacaaaatggccaaaatacccctgagtccaaaatgactaaattacccttctaa 49996722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 18851831 - 18851787
Alignment:
Q  150 atataaacacatatt-aacaattaaaaataattctagcgaaaatc 193  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  18851831 atataaacacatattgaacaattaaaaataattctagcgaaaatc 18851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 22828822 - 22828760
Alignment:
Q  135 atcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||| | ||||||||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  22828822 atcacacacaaacacatataaacacataataaaacaattaaaaataaatctagcgaaaatcgg 22828760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 25094677 - 25094740
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa-caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  25094677 taatcacacacaagcacaaataaacacatattaaacaattaaaaataattatagcgaaaatcgg 25094740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 16646695 - 16646745
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||||||    
T  16646695 caaaatgaccaaaatacccctgagttcaaaatgactaaattacccttctaa 16646745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 16657423 - 16657473
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  16657423 caaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 16657473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 18621305 - 18621227
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaa 191  Q
    ||||||||||||||  |||||||||||||| || |||||||||||||| || |  ||| | ||| ||||||||||||||    
T  18621305 aaaatacacacagagacaattaatcacatacaagcacatataaacacacataataaataataaaaaattctagcgaaaa 18621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 19603870 - 19603931
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaatta 78  Q
    |||||| ||||||| ||| | |||||||| ||||||||||||| | ||||||||||||||||    
T  19603870 tactaatttacccttactcataaaatgaccaaaatacccctgagttcaaaatgactaaatta 19603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 19603971 - 19604023
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||||||||||    
T  19603971 cacatataaacacataataaaacaattaaaaataaatctagcgaaaatcggac 19604023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 23475267 - 23475187
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataa--acacatattaacaattaaaaataattctagcgaaaa 191  Q
    ||||||||||||||  |||||||||||||| || |||||||||  ||||||| |||  | | |||||||||||||||||||    
T  23475267 aaaatacacacagagacaattaatcacatacaagcacatataatcacacataataaataattaaaataattctagcgaaaa 23475187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 33398137 - 33398201
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||||| |||||||||||  ||||||| |||||||||||||||||||||    
T  33398137 taatcacacacaagcacatatatacacatattaaaacaattaagaataattctagcgaaaatcgg 33398201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 16646780 - 16646846
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcggac 197  Q
    |||||||| | || ||||||||||||||||||  || |||||||||||| ||||| |||||||||||    
T  16646780 taatcacagacaagcacatataaacacatattaaaataattaaaaataaatctagggaaaatcggac 16646846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 20446426 - 20446477
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  20446426 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 20446477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 20887317 - 20887266
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||||||||||||||| | || |||||||||||| || ||||||||    
T  20887317 acaaaatgactaaaatacccctaagtctaaaatgactaaaatacccttctaa 20887266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 38033082 - 38033016
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    |||||||| | |||||||||||||||| || |||  ||||||||||||| | |||||||||||||||    
T  38033082 taatcacacacaaacacatataaacacgtactaaaacaattaaaaataaatttagcgaaaatcggac 38033016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 38033166 - 38033119
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttct 85  Q
    |||||||  ||||||| ||||| |||||||||||||||||||||||||    
T  38033166 aaaatgatcaaaatactcctgagtccaaaatgactaaattatccttct 38033119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 4975079 - 4975129
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||||| || |||||| ||||||||||||||||||  |||||||    
T  4975079 caaaatgactaaattatccctgagtccaaaatgactaaattacacttctaa 4975129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 22142848 - 22142778
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||  ||||||||| ||||||||||| | || |||||||| |||||| ||||||||    
T  22142848 tactaatttacccttactcgcaaaatgaccaaaatacccctaagtctaaaatgaccaaattacccttctaa 22142778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 51627158 - 51627108
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| | ||||||| ||| |||||||||||||||||| ||||||||    
T  51627158 caaaatgaccagaatacccatgagtccaaaatgactaaattacccttctaa 51627108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 5767612 - 5767561
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgga 196  Q
    ||||||||||||| ||||||  ||||| |||||||||||||| |||||||||    
T  5767612 cacatataaacacttattaaaacaatttaaaataattctagcaaaaatcgga 5767561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 32788 - 32736
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  32788 cacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcggac 32736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 86249 - 86314
Alignment:
Q  22 aattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||||    
T  86249 aattacccttactaacaaaatgaccaaaatacccctgagtctaaaaggactaaattacccttctaa 86314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1518 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 875 - 965
Alignment:
Q  64 aaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataa 155  Q
    |||||||||||| || |||||||| | |||||| |||||||||||||  |||||||||||| | ||||||| || |||| || |||||||||    
T  875 aaaatgactaaaatacccttctaacaccgaattctaataatcccaac-caaaatacacacataggcaattattcgcatacaagcacatataa 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 61 - 10
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  61 acaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 5045 - 5195
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaact 111  Q
    |||| |||||| |||||||  || ||| |||||| ||||||||||  | ||||||||||||||| || | |||||| | |||||| || ||||||||||     
T  5045 gaaattactaatttacccttgctcacacaatgacaaaaatacccccaagtccaaaatgactaaaatacctttctaacaccgaattctactaatcccaac- 5143  T
Q  112 aaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat 163  Q
     ||||||||| |||  ||||||||||| ||| ||  ||||| |||| |||||    
T  5144 caaaatacacgcagcggcaattaatcatatacaagtacataaaaactcatat 5195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 6474 - 6317
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatca 138  Q
    ||||||| ||||||||| ||| || ||||||| |||| || |||||| | | | || | || ||||||| | ||||| ||||||||||  ||| ||||||    
T  6474 aaatgacaaaaatacccttgagtctaaaatgagtaaaatacccttcttaaaccaaaatctactaatcccgaataaaa-tacacacagagacaaataatca 6376  T
Q  139 cataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaatcgg 195  Q
    |||| || |||||||||||||| || |  ||| |  |||||||||||||||||||||||    
T  6375 catacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcgg 6317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 14056 - 13899
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatca 138  Q
    ||||||| ||||||||| ||| || ||||||| |||| || |||||| | | | || | || ||||||| | ||||| ||||||||||  ||| ||||||    
T  14056 aaatgacaaaaatacccttgagtctaaaatgagtaaaatacccttcttaaaccaaaatctactaatcccgaataaaa-tacacacagagacaaataatca 13958  T
Q  139 cataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaatcgg 195  Q
    |||| || |||||||||||||| || |  ||| |  |||||||||||||||||||||||    
T  13957 catacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcgg 13899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 24008 - 23851
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatca 138  Q
    ||||||| ||||||||| ||| || ||||||| |||| || |||||| | | | || | || ||||||| | ||||| ||||||||||  ||| ||||||    
T  24008 aaatgacaaaaatacccttgagtctaaaatgagtaaaatacccttcttaaaccaaaatctactaatcccgaataaaa-tacacacagagacaaataatca 23910  T
Q  139 cataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaatcgg 195  Q
    |||| || |||||||||||||| || |  ||| |  |||||||||||||||||||||||    
T  23909 catacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcgg 23851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 32852 - 32786
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcggac 197  Q
    |||||||| | || ||||||||||||||||||||  |||||||||||||||||| ||||||| ||||    
T  32852 taatcacacacaagcacatataaacacatattaaatcaattaaaaataattctaccgaaaattggac 32786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 108934 - 108883
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  108934 acaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 108883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 117435 - 117384
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  117435 acaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaa 117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 1780 - 1730
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||||||||||||| || |||||||||||||||||| | ||||||    
T  1780 caaaatgactaaaataccccggagtccaaaatgactaaattaccgttctaa 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 1681 - 1637
Alignment:
Q  147 cacatataaacacatattaa-caattaaaaataattctagcgaaa 190  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||    
T  1681 cacatataaacacataataaacaattaaaaataaatctagcgaaa 1637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 33194 - 33144
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||    
T  33194 caaaatgaccaaaatacccctgagtccaaaatgactaaattaccctactaa 33144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 33094 - 33046
Alignment:
Q  146 acacatataaacacatattaa--caattaaaaataattctagcgaaaat 192  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||    
T  33094 acacatataaacacataataaaacaattaaaaataaatctagcgaaaat 33046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 2912 - 2871
Alignment:
Q  154 aaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  2912 aaacacatataaacaattaaaaataaatctagcgaaaatcgg 2871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 8565 - 8614
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  8565 aaaatgaccaaaatacccctaattccaaaatgactaaattacccttctaa 8614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 14843 - 14891
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatc 193  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  14843 cacatataaacacatattaaaacaattaaaaaaaattctagcgaaaatc 14891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 4079 - 4128
Alignment:
Q  38 aaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  4079 aaaatgaccaaaatacccctaattccaaaatgactaaattacccttctaa 4128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 8693 - 8819
Alignment:
Q  66 aatgactaaattatccttctaatatcgaattataataatcccaactaaaaatacacacagaagcaattaatcacataaaaacacatataaacacatat-- 163  Q
    |||||| ||| || |||||||| | |||||| ||||||||| ||| ||||    ||||||| || |||||||||||| || || | ||||||||| ||      
T  8693 aatgaccaaaatacccttctaacaccgaattctaataatccaaaccaaaat---acacagaggcgattaatcacatacaagcataaataaacacacataa 8789  T
Q  164 taacaattaaaaataattctagcgaaaatc 193  Q
    |||||| ||||||||| |||||||||||||    
T  8790 taacaaataaaaataaatctagcgaaaatc 8819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 48900 - 48948
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttc 84  Q
    |||||||||| ||||||||||| ||||||||||||||||| || |||||    
T  48900 acaaaatgaccaaaatacccctaaatccaaaatgactaaaatacccttc 48948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 62348 - 62396
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttc 84  Q
    |||||||||| ||||||||||| ||||||||||||||||| || |||||    
T  62348 acaaaatgaccaaaatacccctaaatccaaaatgactaaaatacccttc 62396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 73546 - 73630
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaattaaaaataattctagcgaaaatcggac 197  Q
    ||||||||||||||| ||| |||| ||| | || |||||||||||||| | |||  ||  ||||||||||||||||||| |||||    
T  73546 aaaatacacacagaaacaaataatgacacacaagcacatataaacacacaataaatatataaaataattctagcgaaaaacggac 73630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 805 - 742
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa-caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || ||||||||||||||||| || ||||||||||||||| || ||||||||||    
T  805 taatcacacacaagcacatataaacacatataaaacaattaaaaataattttaacgaaaatcgg 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 920 - 971
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| ||| ||||||||||||| || ||||||||    
T  920 acaaaatgaccaaaatacccctaaattcaaaatgactaaaatacccttctaa 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 673 - 724
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| |||| |||||||||||| || ||||||||    
T  673 acaaaatgaccaaaatacccctaaatctaaaatgactaaaatacccttctaa 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 9765 - 9816
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  9765 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 9816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 12860 - 12911
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| |||||| |||||| ||||||||||||||| || ||||||||    
T  12860 acaaaatgaccaaaataaccctgagtccaaaatgactaaaatacccttctaa 12911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 22277 - 22328
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  22277 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 22328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 30861 - 30912
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| |||| |||||||||||| || ||||||||    
T  30861 acaaaatgaccaaaatacccctaaatctaaaatgactaaaatacccttctaa 30912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 6675 - 6725
Alignment:
Q  147 cacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||||||||||||||||  ||||||||||||| |||| ||||||||||    
T  6675 cacatataaacacatattaaaacaattaaaaataaatctatcgaaaatcgg 6725  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 39079 - 39130
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  39079 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 39130  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 97592 - 97643
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  97592 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 97643  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 41438 - 41489
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  41438 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 41489  T

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Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 46945 - 46996
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  46945 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 46996  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 16679 - 16730
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||  |||||||||| | |||||||||||||||||| ||||||||    
T  16679 acaaaatgacctaaatacccctaagtccaaaatgactaaattacccttctaa 16730  T

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Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 26210 - 26261
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||  |||||||||| | |||||||||||||||||| ||||||||    
T  26210 acaaaatgacctaaatacccctaagtccaaaatgactaaattacccttctaa 26261  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 122679 - 122628
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  122679 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 122628  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 70092 - 70041
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  70092 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 70041  T

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Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 79357 - 79306
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  79357 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 79306  T

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Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 151408 - 151345
Alignment:
Q  12 gaaaatactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaa 75  Q
    |||| |||||| |||||||  |||| |||||||| ||||||||||||| | |||||||||||||    
T  151408 gaaattactaatttacccttgcttataaaatgacaaaaatacccctgagttcaaaatgactaaa 151345  T

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Target: scaffold0162 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 6541 - 6491
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||||| | |||||||||||||||| | ||||||    
T  6541 caaaatgaccaaaatacccctgagttcaaaatgactaaattaccgttctaa 6491  T

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Target: scaffold0160 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 765 - 815
Alignment:
Q  37 caaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  765 caaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 815  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 11637 - 11707
Alignment:
Q  17 tactaaattaccctaacttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    |||||| ||||||| |||   |||||||| ||||||||||||| |||||||  ||||||||| ||||||||    
T  11637 tactaatttacccttactcgtaaaatgaccaaaatacccctgagtccaaaactactaaattacccttctaa 11707  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 71389 - 71443
Alignment:
Q  33 cttacaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||||||||| ||||||||||| | || ||||| ||||||||| ||||||||    
T  71389 cttacaaaatgaccaaaatacccctaagtctaaaattactaaattacccttctaa 71443  T

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Target: scaffold0692 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 4590 - 4537
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||||||| ||||||||||| | ||||||||||||||| ||  |||||||||    
T  4590 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatactcttctaata 4537  T

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Target: scaffold0357 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 7204 - 7268
Alignment:
Q  133 taatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    |||||||| | || |||||| ||||||||| |||  ||||||||||||| |||||||||||||||    
T  7204 taatcacacacaagcacataaaaacacataataaaacaattaaaaataactctagcgaaaatcgg 7268  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 25292 - 25376
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatat--aaacacatattaacaattaaaaataattctagcgaaaatcgg 195  Q
    |||||||||||| |  |||||||||||||| || |||||||  ||||||||| |||  | | ||||||||||||| |||||||||    
T  25292 aaaatacacacacagacaattaatcacatacaagcacatataaaaacacataataaataattaaaataattctagtgaaaatcgg 25376  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 61849 - 61929
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaa 191  Q
    ||||||||||||||  |||||||||||||| ||||| ||||| ||||| || |  ||| |  |||||||||||||||||||    
T  61849 aaaatacacacagagacaattaatcacatataaacaaatatagacacacataataaataattaaaataattctagcgaaaa 61929  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 127693 - 127640
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttctaata 89  Q
    |||||||||| ||||||||||| | || |||||||||||| || ||||||||||    
T  127693 acaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaata 127640  T

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Target: scaffold0447 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 9948 - 9996
Alignment:
Q  36 acaaaatgactaaaatacccctgaatccaaaatgactaaattatccttc 84  Q
    |||||||||| ||||||||||| | ||||||||||||||| || |||||    
T  9948 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttc 9996  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 10299 - 10382
Alignment:
Q  113 aaaatacacacagaagcaattaatcacataaaaacacatataaacacatattaacaatta--aaaataattctagcgaaaatcg 194  Q
    |||||||||||| |  |||||||||||| | || |||||||||||||| |  ||||| ||  ||||||| ||||||||||||||    
T  10299 aaaatacacacatagacaattaatcacagacaagcacatataaacacacacaaacaaataataaaataaatctagcgaaaatcg 10382  T

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Target: scaffold0153 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 9284 - 9346
Alignment:
Q  133 taatcacataaaaacacatataaacacatatt--aacaattaaaaataattctagcgaaaatcg 194  Q
    |||||||| | || ||||||||||||||||||  ||||||| |||||||||||||||| |||||    
T  9284 taatcacaaacaagcacatataaacacatattaaaacaatt-aaaataattctagcgacaatcg 9346  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 36589 - 36541
Alignment:
Q  39 aaatgactaaaatacccctgaatccaaaatgactaaattatccttctaa 87  Q
    ||||||| ||||||||||| | ||||||||||||||| || ||||||||    
T  36589 aaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaa 36541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 196709 - 196646
Alignment:
Q  134 aatcacataaaaacacatataaacacatattaa--caattaaaaataattctagcgaaaatcgg 195  Q
    ||||||| | || |||| ||||||||||| |||  ||||||||||||| |||||||||||||||    
T  196709 aatcacacacaagcacaaataaacacataataaaacaattaaaaataaatctagcgaaaatcgg 196646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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