View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15034_low_2 (Length: 741)
Name: NF15034_low_2
Description: NF15034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15034_low_2 |
 |  |
|
| [»] scaffold0024 (5 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 121 - 317
Target Start/End: Original strand, 2986761 - 2986957
Alignment:
| Q |
121 |
tgagtttaatgtaacgtgatttatgatttaataccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttttga |
220 |
Q |
| |
|
||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
| T |
2986761 |
tgagtttaatgtaacatgatttatgttttgataccttaattgaaaagtgatttatcattattcaagttgtttggataatttaaatcaaaattatttttga |
2986860 |
T |
 |
| Q |
221 |
gtgtgaattaatacaaattagtttaaatgattgaaaaagaagaggaacatcgacaaaataagagagtgcaacacttgagtaaatggtaaattgatta |
317 |
Q |
| |
|
|||||||| | || |||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2986861 |
atgtgaattgacgaaatttagtttatataattgaaaaagaagaggaacatcgataaaataagagagtgcaacacttgagtaaatggtaaatttatta |
2986957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 323 - 523
Target Start/End: Original strand, 2987015 - 2987228
Alignment:
| Q |
323 |
tccaaccttgaatcgattttcgaacaacaatcacttaaaattatttagagtttccac-gacaagttgatttagtacataactcacgtttgatcttgtgaa |
421 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2987015 |
tccaaccttgaatcgaatttggaacaacaatcacttaaaattattaacagtttccattgacaagttgatttagtacataactcacgtttgatcttgtgaa |
2987114 |
T |
 |
| Q |
422 |
cttacgtcgcatgtcttccaac-------tcacaaccaaaaaagcaccacattaatta-----tttttatcatatatccctacatttatgctctcactct |
509 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||| || |
|
|
| T |
2987115 |
cttacgtcaagtgtcttccaactcacaagtcacaaccaaaaaagcacgacattaattattatttttttaccatatatccttacatttatgctctcaccct |
2987214 |
T |
 |
| Q |
510 |
ccattttacttaaa |
523 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2987215 |
ccattttacttaaa |
2987228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 121 - 317
Target Start/End: Original strand, 2928127 - 2928318
Alignment:
| Q |
121 |
tgagtttaatgtaacgtgatttatgatttaataccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttttga |
220 |
Q |
| |
|
||||||||| ||| |||| ||||| ||| ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
2928127 |
tgagtttaagttaaggtgacttatgttttgataccttgattgaaaagtgatttttcataattcaagttgtttagataatttagatcaaaattacttttga |
2928226 |
T |
 |
| Q |
221 |
gtgtgaattaatacaaattagtttaaatgattgaaaaagaagaggaacatcgacaaaataagagagtgcaacacttgagtaaatggtaaattgatta |
317 |
Q |
| |
|
||||||||| | ||| | |||| ||||||| |||||||||||| || | | |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2928227 |
gtgtgaatttaccaaaactggtttgaatgattaaaaaagaagaggcacgttaataaaataagagagtg-----cttgagtaaatggtaaattgatta |
2928318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 152 - 317
Target Start/End: Original strand, 2935663 - 2935828
Alignment:
| Q |
152 |
taccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttttgagtgtgaattaatacaaattagtttaaatgat |
251 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| |||||||| || ||| |||| |||||| |
|
|
| T |
2935663 |
taccttgattgaaaagtgatttttcataattcatgttgtttggataatttagatcaaaattgtttttgaatgtgaatttatcaaaacgcgtttgaatgat |
2935762 |
T |
 |
| Q |
252 |
tgaaaaagaagaggaacatcgacaaaataagagagtgcaacacttgagtaaatggtaaattgatta |
317 |
Q |
| |
|
| ||||||||||||||| || | ||||||||| | || ||||||||| |||||||||||||||||| |
|
|
| T |
2935763 |
taaaaaagaagaggaacgtcaataaaataagacaatgaaacacttgactaaatggtaaattgatta |
2935828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 125 - 282
Target Start/End: Original strand, 2952983 - 2953140
Alignment:
| Q |
125 |
tttaatgtaacgtgatttatgatttaataccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttttgagtgt |
224 |
Q |
| |
|
||||||||| | ||||||||| || ||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| || || |
|
|
| T |
2952983 |
tttaatgtatcatgatttatgtttggatatcttgattgaaaagtgatttttcataattcaagttgtttggagaatttagatcaaaattacttttaagagt |
2953082 |
T |
 |
| Q |
225 |
gaattaatacaaattagtttaaatgattgaaaaagaagaggaacatcgacaaaataag |
282 |
Q |
| |
|
||||| || ||| |||||| ||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
2953083 |
gaatttatcaaaactagtttgaatgattaaaaaagaagaggaacatccataaaataag |
2953140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 323 - 523
Target Start/End: Original strand, 2985959 - 2986155
Alignment:
| Q |
323 |
tccaaccttgaatcgattttcgaacaacaatcacttaaaattatttagagtttccacgacaagttgatttagtacataactcacgtttgatcttgtgaac |
422 |
Q |
| |
|
||||||||| |||| | ||| ||||||||||||| |||||||| ||||||| ||| |||| ||||||||| ||||||||| ||||||| | | ||||| |
|
|
| T |
2985959 |
tccaaccttaaatccagtttggaacaacaatcacataaaattagttagagtccccaa-acaatttgatttagaacataactctcgtttgaccctatgaac |
2986057 |
T |
 |
| Q |
423 |
ttacgtcgcatgtcttccaactcacaaccaaaaaagcaccacattaattatttttatcatatatccctacatttatgctctcactc-tccattttactta |
521 |
Q |
| |
|
||||||| || ||||||||||||||||||| |||||| || || ||||| ||||||| |||||||||||| |||||||| ||||||||||||| |
|
|
| T |
2986058 |
ttacgtcaagtgccttccaactcacaaccaaacaagcacgac----atcttttttttcatatacccctacatttatagtctcactcttccattttactta |
2986153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 3002960 - 3002848
Alignment:
| Q |
19 |
atgggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaat------------gtgtgtttggttccacggtgataataatt |
106 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| |||| |
|
|
| T |
3002960 |
atgggtctgatagtgtggttggcaaaatctaggggtgcaggtagaaacttcaaactaatgtcgtgtctcgcgtgcgtttggttccacggtgataacaatt |
3002861 |
T |
 |
| Q |
107 |
gtttttgaatgaa |
119 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3002860 |
gtttttgaatgaa |
3002848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 2954967 - 2955027
Alignment:
| Q |
19 |
atgggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
2954967 |
atgggtctgatagtgtggttggcaaaatctagggttgcaggtagaaactcctaactaatgt |
2955027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 2986612 - 2986672
Alignment:
| Q |
19 |
atgggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
2986612 |
atgggtctgatagtgtggttggcaaaatctaggggtgcaactagaaactcctaactaatgt |
2986672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 2952838 - 2952895
Alignment:
| Q |
22 |
ggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
2952838 |
ggtctgatagtgttgttggcaaaatctaggggtgcaggtagaaattcctaactaatgt |
2952895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 2974890 - 2974944
Alignment:
| Q |
25 |
ctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
|||||||||| | ||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2974890 |
ctgatagtgttgttggaaaaatctaggggtgcaggtagaaactcctaactaatgt |
2974944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 2955324 - 2955373
Alignment:
| Q |
180 |
attcaagttgtttggataatttagatccaaattacttttgagtgtgaatt |
229 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
2955324 |
attcaagttgtttggataatttagatcaaaattacttctgaatgtgaatt |
2955373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 2955220 - 2955292
Alignment:
| Q |
125 |
tttaatgtaacgtgatttatgatttaataccttaattgaaaagtgatttttcattattcaagttgtttggata |
197 |
Q |
| |
|
||||||||||| | ||||||| | |||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
2955220 |
tttaatgtaacataatttatgttaggataccttaattgaaaagtgatttttcataattcaagtgttttggata |
2955292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 2935508 - 2935549
Alignment:
| Q |
38 |
tggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2935508 |
tggcaaaatctaggggtgcaggtagaaactcataactaatgt |
2935549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 2965404 - 2965457
Alignment:
| Q |
22 |
ggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaacta |
75 |
Q |
| |
|
||||||||||||| | ||||||||||||||| | |||||||||||||| ||||| |
|
|
| T |
2965404 |
ggtctgatagtgttgttggcaaaatctagggtttcaggtagaaactcctaacta |
2965457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 3002820 - 3002775
Alignment:
| Q |
118 |
aaatgagtttaatgtaacgtgatttatgatttaataccttaattga |
163 |
Q |
| |
|
||||||||||| |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
3002820 |
aaatgagtttagtgtaacatgatttatgttttaataccttaattga |
3002775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 2927989 - 2928051
Alignment:
| Q |
19 |
atgggtctgatagtgtggatggcaaaa--tctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
||||||||||||| |||| |||||||| ||| |||||||||||||||||||| |||||||| |
|
|
| T |
2927989 |
atgggtctgatagcgtggttggcaaaaaatcttggggtgcaggtagaaactcctgactaatgt |
2928051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 2985775 - 2985878
Alignment:
| Q |
185 |
agttgtttggataatttagatccaaattacttttgagtgtgaattaatacaaattagtttaaatgattgaaaa-agaagaggaacatcgacaaaataaga |
283 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||| ||||||||| ||| | ||| |||||| ||||||| |||| ||||||||| |||| | |||||||| |
|
|
| T |
2985775 |
agttgtttgggtaatttaaatcgaaattactcttgagtgtgcatttaccaaaactagtttgaatgattaaaaaaagaagaggagcatcaatcaaataaga |
2985874 |
T |
 |
| Q |
284 |
gagt |
287 |
Q |
| |
|
|||| |
|
|
| T |
2985875 |
gagt |
2985878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 2983761 - 2983798
Alignment:
| Q |
40 |
gcaaaatctaggggtgcaggtagaaactccaaactaat |
77 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
2983761 |
gcaaaatctaggggtgcaggtaaaaactcctaactaat |
2983798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 106; Significance: 1e-52; HSPs: 5)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 118 - 315
Target Start/End: Complemental strand, 43401 - 43204
Alignment:
| Q |
118 |
aaatgagtttaatgtaacgtgatttatgatttaataccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttt |
217 |
Q |
| |
|
|||||| |||||| ||| ||||||||| || |||| ||| |||||||| ||||||||||| |||||||||||||||||||||| |||| |||| ||||| |
|
|
| T |
43401 |
aaatgactttaatataatatgatttatgtttgaatatcttgattgaaaaatgatttttcataattcaagttgtttggataattttgatcgaaatgacttt |
43302 |
T |
 |
| Q |
218 |
tgagtgtgaattaatacaaattagtttaaatgattgaaaaagaagaggaacatcgacaaaataagagagtgcaacacttgagtaaatggtaaattgat |
315 |
Q |
| |
|
| |||||||||| || ||| |||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
43301 |
taagtgtgaatttatcaaaactagtttgaatgattgaaaaagaagaggaacatcaataaaataagagactgcaacacttgagtaaatggtgaattgat |
43204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 34092 - 33991
Alignment:
| Q |
125 |
tttaatgtaacgtgatttatgatttaataccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttttgagtgt |
224 |
Q |
| |
|
||||||||||| |||||||| || ||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34092 |
tttaatgtaacatgatttatatttggatagcttgattgaaaagtgatttttcataattcaagttatttggataatttagatcaaaattacttttgagtgt |
33993 |
T |
 |
| Q |
225 |
ga |
226 |
Q |
| |
|
|| |
|
|
| T |
33992 |
ga |
33991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 34237 - 34180
Alignment:
| Q |
22 |
ggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
||||||||||||| | |||||||||||| ||||||| ||||||||||| || |||||| |
|
|
| T |
34237 |
ggtctgatagtgttgttggcaaaatctacgggtgcaagtagaaactcctaagtaatgt |
34180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 323 - 410
Target Start/End: Complemental strand, 33829 - 33739
Alignment:
| Q |
323 |
tccaaccttgaatcgattttcgaacaacaatcacttaaaattatttagagtttccacgacaagttgattt----agtacataactcacgttt |
410 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||| |||||| || |||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
33829 |
tccaaccttaaatcgattttggaacaacaatcacgtaaaatgataaagagcatcca-aacaagttgatttattaagtacataactcacgttt |
33739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 43131 - 43082
Alignment:
| Q |
323 |
tccaaccttgaatcgattttcgaacaacaatcacttaaaattatttagag |
372 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||| |||||||||| |||| |
|
|
| T |
43131 |
tccaaccttaaattgattttggaacaacaatcacataaaattattaagag |
43082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 84; Significance: 2e-39; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 151 - 317
Target Start/End: Original strand, 3340056 - 3340223
Alignment:
| Q |
151 |
ataccttaattgaaaagtgatttttcattattcaagttgtttggataatttagatccaaattacttttgagtgtgaattaatacaaattagtttaaatga |
250 |
Q |
| |
|
||||||| |||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| || ||| | |||| ||||| |
|
|
| T |
3340056 |
ataccttgattgaaaagtaaattttcataattcaagttgtttggataatttagattaaaattacttttgagtgtgaatttatcaaaactggttttaatga |
3340155 |
T |
 |
| Q |
251 |
tt-gaaaaagaagaggaacatcgacaaaataagagagtgcaacacttgagtaaatggtaaattgatta |
317 |
Q |
| |
|
|| |||||||| |||||| || | |||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
3340156 |
ttaaaaaaagaaaaggaacgtcaataaaataagagagtgcaacacttgactaaatgataaattgatta |
3340223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 3339881 - 3339941
Alignment:
| Q |
19 |
atgggtctgatagtgtggatggcaaaatctaggggtgcaggtagaaactccaaactaatgt |
79 |
Q |
| |
|
|||||||||||| | ||| |||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
3339881 |
atgggtctgataatatggttggcaaaatctaggggtgcatgtagaaactcctaactaatgt |
3339941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 423
Target Start/End: Original strand, 3340362 - 3340396
Alignment:
| Q |
389 |
atttagtacataactcacgtttgatcttgtgaact |
423 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |
|
|
| T |
3340362 |
atttagtacataactcacgtttgatcatgtgaact |
3340396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 314
Target Start/End: Original strand, 7473110 - 7473140
Alignment:
| Q |
284 |
gagtgcaacacttgagtaaatggtaaattga |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
7473110 |
gagtgcaacacttgagtaaatggtaaattga |
7473140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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