View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15034_low_8 (Length: 372)
Name: NF15034_low_8
Description: NF15034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15034_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 9 - 358
Target Start/End: Original strand, 4802254 - 4802603
Alignment:
| Q |
9 |
gcttatttgtttcatggctttgtttcttttagaaatggttgatgcgatgaagaatgttgcgaaactcaacgttgaattgacggttgaagagaggaatctg |
108 |
Q |
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| T |
4802254 |
gcttatttgtttcatggctttgtttcttttagaaatggttgatgcgatgaagaatgttgcgaaactcaacgttgaattgacggttgaagagaggaatctg |
4802353 |
T |
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| Q |
109 |
ttatcagttgcttacaagaatgttgttggagcacgtagggcgtgtttgaggattctttcatcgattgagcagcgagaagaagcgaaagggagtgatgtga |
208 |
Q |
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| T |
4802354 |
ttatcagttgcttacaagaatgttgttggagcacgtagggcttcttggaggattctttcttcgattgagcagcgagaagaagcgaaagggagtgatgtga |
4802453 |
T |
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| Q |
209 |
atgtccatcggatcaaggagtatcggaaaaaagttgaatcggagttggctgatgtttgtaatgatattatgactgtgattgatgatcatcttgttccgaa |
308 |
Q |
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| T |
4802454 |
atgtcaatcggatcaaggagtatcggaaaaaagttgaatcggagttggctgatgtttgtaatgatattatgactgtgattgatgatcatcttattccgaa |
4802553 |
T |
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| Q |
309 |
ttcttccggtgaatctaatgtgttctattgcaaaatgtaggtttattttt |
358 |
Q |
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| T |
4802554 |
ttcttccggtgaatctaatgtgttctattacaaaatgtaggtttagtttt |
4802603 |
T |
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