View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15035_high_7 (Length: 334)

Name: NF15035_high_7
Description: NF15035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15035_high_7
NF15035_high_7
[»] chr5 (16 HSPs)
chr5 (46-150)||(2230425-2230529)
chr5 (203-323)||(32473378-32473498)
chr5 (209-323)||(17208076-17208190)
chr5 (209-323)||(30622703-30622816)
chr5 (209-306)||(38470581-38470678)
chr5 (207-306)||(5256995-5257094)
chr5 (209-306)||(2614650-2614747)
chr5 (209-306)||(7617135-7617232)
chr5 (209-306)||(22512307-22512404)
chr5 (209-306)||(41334664-41334761)
chr5 (209-306)||(18033984-18034081)
chr5 (209-306)||(33801471-33801568)
chr5 (164-206)||(2230366-2230408)
chr5 (215-292)||(39122448-39122524)
chr5 (209-279)||(33855071-33855141)
chr5 (204-253)||(25915041-25915090)
[»] chr1 (22 HSPs)
chr1 (209-323)||(45639716-45639830)
chr1 (209-323)||(48119630-48119744)
chr1 (204-323)||(35003291-35003410)
chr1 (209-323)||(38335920-38336034)
chr1 (209-323)||(46168385-46168499)
chr1 (197-323)||(38113179-38113305)
chr1 (209-323)||(26585464-26585578)
chr1 (209-323)||(44112679-44112793)
chr1 (209-323)||(45705827-45705941)
chr1 (209-323)||(45427729-45427843)
chr1 (209-316)||(41065155-41065262)
chr1 (209-323)||(35000097-35000211)
chr1 (209-306)||(37814780-37814877)
chr1 (204-306)||(43571087-43571189)
chr1 (209-306)||(5489778-5489875)
chr1 (207-301)||(2497568-2497662)
chr1 (204-306)||(7447823-7447924)
chr1 (209-264)||(14427349-14427404)
chr1 (209-306)||(23989524-23989622)
chr1 (209-306)||(48498963-48499060)
chr1 (209-306)||(750306-750403)
chr1 (245-306)||(4401366-4401427)
[»] chr4 (36 HSPs)
chr4 (209-323)||(17619136-17619250)
chr4 (209-323)||(711962-712076)
chr4 (209-323)||(32728359-32728473)
chr4 (209-323)||(55272360-55272474)
chr4 (204-323)||(38851510-38851629)
chr4 (207-312)||(3756242-3756346)
chr4 (207-323)||(35037005-35037121)
chr4 (213-323)||(48435563-48435673)
chr4 (209-323)||(960854-960968)
chr4 (209-323)||(46827690-46827804)
chr4 (244-323)||(19879991-19880070)
chr4 (209-306)||(33703143-33703240)
chr4 (207-306)||(27893843-27893942)
chr4 (209-287)||(49229684-49229762)
chr4 (209-306)||(28988475-28988572)
chr4 (209-301)||(27864566-27864658)
chr4 (209-292)||(55966361-55966444)
chr4 (209-301)||(48463456-48463548)
chr4 (261-323)||(36004100-36004162)
chr4 (209-306)||(25051695-25051792)
chr4 (209-306)||(35017735-35017831)
chr4 (209-306)||(41878408-41878505)
chr4 (209-292)||(1771281-1771364)
chr4 (209-292)||(28982837-28982920)
chr4 (204-306)||(41327544-41327646)
chr4 (209-306)||(27316714-27316811)
chr4 (201-306)||(31680896-31681001)
chr4 (207-292)||(43514701-43514786)
chr4 (206-306)||(43949802-43949903)
chr4 (209-306)||(45490314-45490411)
chr4 (206-306)||(43735741-43735841)
chr4 (204-306)||(39631097-39631200)
chr4 (204-306)||(12496953-12497055)
chr4 (209-306)||(23035982-23036079)
chr4 (209-306)||(41847973-41848070)
chr4 (210-306)||(23204779-23204875)
[»] chr2 (29 HSPs)
chr2 (207-323)||(11825638-11825754)
chr2 (209-323)||(43114559-43114673)
chr2 (207-323)||(4299404-4299520)
chr2 (209-323)||(966818-966932)
chr2 (209-323)||(12415444-12415558)
chr2 (209-323)||(12427504-12427618)
chr2 (205-323)||(41281958-41282076)
chr2 (209-323)||(18491707-18491821)
chr2 (213-323)||(34895725-34895835)
chr2 (231-323)||(4451934-4452026)
chr2 (209-313)||(16803970-16804074)
chr2 (209-313)||(16843252-16843356)
chr2 (209-323)||(14285678-14285792)
chr2 (209-306)||(30838634-30838731)
chr2 (225-323)||(12531647-12531744)
chr2 (207-292)||(6518484-6518568)
chr2 (209-306)||(34817777-34817874)
chr2 (197-306)||(43490402-43490511)
chr2 (207-303)||(8896587-8896683)
chr2 (209-306)||(19047159-19047256)
chr2 (209-306)||(1750416-1750513)
chr2 (209-306)||(4764727-4764824)
chr2 (209-306)||(13780736-13780833)
chr2 (209-306)||(12302254-12302351)
chr2 (209-306)||(16096749-16096846)
chr2 (200-292)||(7070409-7070501)
chr2 (207-301)||(33229301-33229396)
chr2 (209-292)||(42026769-42026854)
chr2 (209-292)||(43335778-43335861)
[»] chr7 (26 HSPs)
chr7 (204-323)||(31513284-31513403)
chr7 (209-323)||(31408617-31408731)
chr7 (209-323)||(40236921-40237035)
chr7 (209-323)||(33384872-33384987)
chr7 (209-319)||(27535219-27535329)
chr7 (206-306)||(10573748-10573848)
chr7 (204-306)||(42538432-42538534)
chr7 (209-306)||(5194232-5194329)
chr7 (209-306)||(24001013-24001110)
chr7 (209-306)||(24280597-24280694)
chr7 (213-306)||(45326026-45326119)
chr7 (207-306)||(4638200-4638299)
chr7 (209-292)||(9216304-9216386)
chr7 (207-301)||(44326178-44326272)
chr7 (209-306)||(43317445-43317542)
chr7 (204-306)||(44416935-44417037)
chr7 (209-306)||(35069723-35069820)
chr7 (209-274)||(39998410-39998475)
chr7 (210-301)||(26898408-26898499)
chr7 (207-306)||(43343625-43343724)
chr7 (223-306)||(27393261-27393344)
chr7 (204-306)||(5810925-5811027)
chr7 (209-306)||(5015397-5015494)
chr7 (245-306)||(32029818-32029879)
chr7 (207-306)||(16180358-16180456)
chr7 (209-292)||(42972854-42972937)
[»] scaffold0003 (1 HSPs)
scaffold0003 (205-323)||(45703-45821)
[»] chr6 (18 HSPs)
chr6 (205-323)||(27441540-27441658)
chr6 (209-323)||(33242405-33242519)
chr6 (209-323)||(33253915-33254030)
chr6 (209-306)||(3213402-3213499)
chr6 (209-321)||(31109208-31109320)
chr6 (209-306)||(7273336-7273433)
chr6 (209-306)||(13743222-13743319)
chr6 (209-306)||(13748722-13748819)
chr6 (206-301)||(24203993-24204088)
chr6 (209-306)||(9698334-9698431)
chr6 (209-306)||(21293678-21293775)
chr6 (209-306)||(26670010-26670107)
chr6 (209-306)||(30014345-30014442)
chr6 (209-306)||(21279931-21280028)
chr6 (209-306)||(26466801-26466898)
chr6 (207-306)||(30735982-30736081)
chr6 (209-306)||(7292749-7292846)
chr6 (209-301)||(7367551-7367643)
[»] chr3 (24 HSPs)
chr3 (209-323)||(10457876-10457990)
chr3 (209-323)||(52627961-52628075)
chr3 (209-323)||(25996270-25996384)
chr3 (209-323)||(9434126-9434240)
chr3 (209-323)||(4190249-4190363)
chr3 (209-323)||(34791831-34791945)
chr3 (209-323)||(51757595-51757709)
chr3 (209-306)||(46941055-46941152)
chr3 (209-301)||(45126934-45127026)
chr3 (209-306)||(54237098-54237195)
chr3 (209-292)||(42100690-42100773)
chr3 (209-306)||(42394420-42394517)
chr3 (256-306)||(51249357-51249407)
chr3 (209-306)||(40808867-40808964)
chr3 (211-295)||(29558246-29558330)
chr3 (207-306)||(27748563-27748662)
chr3 (209-306)||(24688403-24688500)
chr3 (209-306)||(25413683-25413780)
chr3 (209-306)||(36150132-36150229)
chr3 (209-306)||(40480751-40480848)
chr3 (209-306)||(47191027-47191123)
chr3 (209-306)||(54246149-54246246)
chr3 (207-306)||(53581859-53581958)
chr3 (245-307)||(53273684-53273746)
[»] scaffold0100 (1 HSPs)
scaffold0100 (204-323)||(35440-35559)
[»] chr8 (24 HSPs)
chr8 (209-323)||(35181518-35181632)
chr8 (209-323)||(16603610-16603724)
chr8 (209-323)||(34304790-34304904)
chr8 (209-319)||(18066706-18066816)
chr8 (209-323)||(16358817-16358932)
chr8 (207-323)||(33629977-33630093)
chr8 (209-323)||(19386549-19386668)
chr8 (261-323)||(10678136-10678198)
chr8 (207-306)||(29800951-29801050)
chr8 (207-306)||(42295195-42295294)
chr8 (209-306)||(11582768-11582865)
chr8 (209-306)||(36743484-36743581)
chr8 (206-306)||(26125634-26125734)
chr8 (207-301)||(20148760-20148854)
chr8 (215-306)||(31384672-31384763)
chr8 (209-306)||(5754905-5755002)
chr8 (209-306)||(29705364-29705461)
chr8 (209-306)||(30660743-30660840)
chr8 (207-292)||(30912577-30912662)
chr8 (209-292)||(1375544-1375627)
chr8 (198-301)||(42699248-42699351)
chr8 (209-306)||(42197436-42197533)
chr8 (209-292)||(45397318-45397401)
chr8 (209-306)||(2165964-2166061)
[»] scaffold0119 (1 HSPs)
scaffold0119 (209-306)||(687-784)
[»] scaffold0038 (1 HSPs)
scaffold0038 (209-306)||(112657-112754)
[»] scaffold0385 (1 HSPs)
scaffold0385 (209-306)||(11253-11350)
[»] scaffold0157 (1 HSPs)
scaffold0157 (204-306)||(23422-23524)
[»] scaffold0187 (2 HSPs)
scaffold0187 (209-306)||(14189-14286)
scaffold0187 (209-306)||(24517-24614)


Alignment Details
Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 2230529 - 2230425
Alignment:
Q  46 agatatatgcagagtggaaagtgaagggaattttcgggctagaggatggcatcgatgagtttgtacgagaaccgagtgaagaaggaccaaaaatatggag 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2230529 agatatatgcagagtggaaagtgaagggaattttcgggctagaggatggcatcgatgaatttgtacgagaaccgagtgaagaaggaccaaaaatatggag 2230430  T
Q  146 atcaa 150  Q
    |||||    
T  2230429 atcaa 2230425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 203 - 323
Target Start/End: Complemental strand, 32473498 - 32473378
Alignment:
Q  203 atttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttc 302  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||||  ||||||||| |||||||||||||| |||||||||||| |||||||||    
T  32473498 atttggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttc 32473399  T
Q  303 tctttcatctcctctcccttt 323  Q
    |||||||||||||||||||||    
T  32473398 tctttcatctcctctcccttt 32473378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 17208076 - 17208190
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||| |||||||||||||||||||||   |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  17208076 aaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctttc 17208175  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  17208176 atctcctctcccttt 17208190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 30622816 - 30622703
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||| |||||||||||||| | |||||||  | |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  30622816 aaaatgttacatgaacatcctttaatcatacaccctattgtaagc-ccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 30622718  T
Q  309 atctcctctcccttt 323  Q
    |||||||||| ||||    
T  30622717 atctcctctctcttt 30622703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 38470581 - 38470678
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  38470581 aaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatctt 38470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 5256995 - 5257094
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  5256995 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 5257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 2614747 - 2614650
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  2614747 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 7617135 - 7617232
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |||||||    ||| ||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  7617135 aaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 22512307 - 22512404
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||    ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  22512307 aaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 41334761 - 41334664
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| ||||||| |  ||| ||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  41334761 aaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 18033984 - 18034081
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||    ||||||||| | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  18033984 aaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 18034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 33801471 - 33801568
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||| |||||| |  |||| |  ||||||||| ||||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  33801471 aaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 2230408 - 2230366
Alignment:
Q  164 aaaatagagaaatcaagtgtgcttttgaacctatttttaattt 206  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  2230408 aaaatagagaaatcaagtgtacttttgagcctatttttaattt 2230366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 39122524 - 39122448
Alignment:
Q  215 ttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    ||||||||||||| |||| |||||||||  |||  |||| ||||| |||| | |||||||||||||||||||||||||    
T  39122524 ttacatgaacaccttttattcatacatctaattagacac-ccatgtattaggaatattttggtaaattcatctcacaa 39122448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 33855141 - 33855071
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaa 279  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| ||||| |||| | | ||||||||||    
T  33855141 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 25915090 - 25915041
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacac 253  Q
    ||||||||||||||||||||||||||||| || |||| |  |||||||||    
T  25915090 tttgaaaaatgttacatgaacaccctttattcctacacctcattgtacac 25915041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 8e-49; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 45639830 - 45639716
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45639830 aaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctttc 45639731  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  45639730 atctcctctcccttt 45639716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 48119630 - 48119744
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48119630 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 48119729  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  48119730 atctcctctcccttt 48119744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 35003291 - 35003410
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  35003291 tttggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttct 35003390  T
Q  304 ctttcatctcctctcccttt 323  Q
    ||||||||||||||||||||    
T  35003391 ctttcatctcctctcccttt 35003410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 38335920 - 38336034
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38335920 aaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 38336019  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  38336020 atctcctctcccttt 38336034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 46168385 - 46168499
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46168385 aaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 46168484  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  46168485 atctcctctcccttt 46168499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 38113305 - 38113179
Alignment:
Q  197 tttttaatttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcat 296  Q
    ||||||||| | ||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||| || ||||||||||||||||||||||| |||    
T  38113305 tttttaattaggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccat 38113206  T
Q  297 actttctctttcatctcctctcccttt 323  Q
    |||| ||||||||||||||||||||||    
T  38113205 acttactctttcatctcctctcccttt 38113179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 26585464 - 26585578
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||| |||||||  |||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  26585464 aaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctttc 26585563  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  26585564 atctcctctcccttt 26585578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 44112679 - 44112793
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  44112679 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 44112778  T
Q  309 atctcctctcccttt 323  Q
    |||||||||| ||||    
T  44112779 atctcctctcacttt 44112793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 45705827 - 45705941
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||| |||||||||||||||||||||||  |||||||||| |||||||||| ||| |||||| |||||||||||||||| |||||||||||||||    
T  45705827 aaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttc 45705926  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  45705927 atctcctctcccttt 45705941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 45427843 - 45427729
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||| ||| |||||||||||| | |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  45427843 aaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 45427744  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  45427743 atctcctctcccttt 45427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 41065155 - 41065262
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | | |||||||| |||||||||| ||  |||||||||| |||||||||||| |||||||||||||||    
T  41065155 aaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctttc 41065254  T
Q  309 atctcctc 316  Q
     |||||||    
T  41065255 ctctcctc 41065262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 35000211 - 35000097
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||| ||||||||||||   ||||||| ||  |||| |||| ||| |||||| |||||| ||||||||| |||||||||||||||    
T  35000211 aaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctttc 35000112  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  35000111 atctcctctcccttt 35000097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 37814780 - 37814877
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||| ||||| ||||||||||||||||||||||||| |||||| || ||||| ||||    
T  37814780 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 43571189 - 43571087
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| |||||||||||||||||||||||| || |||| |  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| |    
T  43571189 tttggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 43571090  T
Q  304 ctt 306  Q
    |||    
T  43571089 ctt 43571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 5489778 - 5489875
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  5489778 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 2497662 - 2497568
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||||| |||||| |||| ||||||||   ||||||||| ||||  ||||||||||||||||||| |||||||||||| || |||||    
T  2497662 gaaaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacacttt 2497568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 7447823 - 7447924
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||||||||||||||||||||| |||||| || ||||||  ||||||||| ||||| ||||  ||||||||| ||| |||||||||||| || ||||| |    
T  7447823 tttgaaaaatgttacatgaacatcctttattcctacatcccattgtacac-ccatgtattacagatattttgataagttcatctcacaaccacactttat 7447921  T
Q  304 ctt 306  Q
    |||    
T  7447922 ctt 7447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 14427349 - 14427404
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcatta 264  Q
    |||||||||||||||||||||||||||||||| | ||||||||||  |||||||||    
T  14427349 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 23989622 - 23989524
Alignment:
Q  209 aaaatgttacatgaacaccctttaat-cataca-tcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||||||| || |||||| ||| |||||| || | ||| |||| ||||||||||||||||| ||||||||| || ||||| ||||    
T  23989622 aaaatgttacatgaacacccttttattcatacactca-attgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatctt 23989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 48499060 - 48498963
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||| ||||| |  ||||    |||||||||  |||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  48499060 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 750403 - 750306
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||| |||||||||||   || |||| |  ||||||||| ||||| || | |||||||||| ||||||||||||| || || ||||| ||||    
T  750403 aaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 4401366 - 4401427
Alignment:
Q  245 attgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||| ||||| ||||  ||||||||||||| |||||||||||| || ||||| ||||    
T  4401366 attgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatctt 4401427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 17619250 - 17619136
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17619250 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 17619151  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  17619150 atctcctctcccttt 17619136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 711962 - 712076
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  711962 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctttc 712061  T
Q  309 atctcctctcccttt 323  Q
    ||||||||| |||||    
T  712062 atctcctcttccttt 712076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 32728359 - 32728473
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  32728359 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctttc 32728458  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  32728459 atctcctctcccttt 32728473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 55272474 - 55272360
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||| ||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55272474 aaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 55272375  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  55272374 atctcctctcccttt 55272360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 38851510 - 38851629
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||| ||| |||||| |||||||||||||||| ||||||||||    
T  38851510 tttgaaaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttct 38851609  T
Q  304 ctttcatctcctctcccttt 323  Q
    ||||||||||||||||||||    
T  38851610 ctttcatctcctctcccttt 38851629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 3756346 - 3756242
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  3756346 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctt 3756248  T
Q  307 tcatct 312  Q
    ||||||    
T  3756247 tcatct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 35037005 - 35037121
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||| |||||||||| ||||||   |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  35037005 gaaaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctt 35037104  T
Q  307 tcatctcctctcccttt 323  Q
    || ||||||||||||||    
T  35037105 tcttctcctctcccttt 35037121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 48435673 - 48435563
Alignment:
Q  213 tgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttcatct 312  Q
    ||||||||||||||| |||||||| ||| | |||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||    
T  48435673 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 48435574  T
Q  313 cctctcccttt 323  Q
    |||||||||||    
T  48435573 cctctcccttt 48435563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 960968 - 960854
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||||||||||||||||   |||||||||| | || ||||| ||| |||||||||||||||||| | |||| |||||||||||||    
T  960968 aaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtactttctctttc 960869  T
Q  309 atctcctctcccttt 323  Q
    ||||||| |||||||    
T  960868 atctcctatcccttt 960854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 46827804 - 46827690
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||||||||||||||||   |||||||||| | |||||||||| |  |||||||||||| ||||||||| |||| ||||||||||    
T  46827804 aaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctttc 46827705  T
Q  309 atctcctctcccttt 323  Q
    |||||| ||||||||    
T  46827704 atctcccctcccttt 46827690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 323
Target Start/End: Original strand, 19879991 - 19880070
Alignment:
Q  244 tattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttcatctcctctcccttt 323  Q
    |||||||||| ||||  |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19879991 tattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctcctttcccttt 19880070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 33703143 - 33703240
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||||| |||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  33703143 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 27893942 - 27893843
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  27893942 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 27893843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 49229762 - 49229684
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatct 287  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||  ||||||||||||||||| ||||||||||||||    
T  49229762 aaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 28988475 - 28988572
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| ||||||| |  ||||||||| ||||||| || ||| |||||| ||||||||||||| || || ||||||||||    
T  28988475 aaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 27864566 - 27864658
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||| |||||| |||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || |||||    
T  27864566 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 27864658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 55966444 - 55966361
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||  ||||| |||| |||||||||||||| ||||||||||||    
T  55966444 aaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaa 55966361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 48463548 - 48463456
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||| |||||| |||| ||||||||   ||||||||  ||||| |||| |||||||||||||| |||||||||||| ||||||||    
T  48463548 aaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatacttt 48463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 36004162 - 36004100
Alignment:
Q  261 attaaggatattttggtaaattcatctcacaatcatactttctctttcatctcctctcccttt 323  Q
    |||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  36004162 attagggacattttgataaatttatctcacaaccatactttctctttcatctcctctcccttt 36004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 25051695 - 25051792
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||| |||||||||| ||||| || |||| |  ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  25051695 aaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatctt 25051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 35017735 - 35017831
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || || |||  ||||||||| ||||| | || |||||||||||||| |||||||||||| || ||||| ||||    
T  35017735 aaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcacaaccacactttatctt 35017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 41878408 - 41878505
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||| ||||| ||||||| |  ||||||||| | || ||||| |||||||||| ||| |||||||||||| || || |||||||    
T  41878408 aaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctctt 41878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 1771364 - 1771281
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  1771364 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaa 1771281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 28982920 - 28982837
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||||||||||||||| |  |||| | |||||||||  ||||  |||| |||||||||||||| ||||||||||||    
T  28982920 aaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaa 28982837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 41327646 - 41327544
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||||||||||||||||  |||||||||| ||| ||| |  |||||||||   ||||| || ||| ||||||||||||||||||||||  || |||||||    
T  41327646 tttgaaaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttct 41327547  T
Q  304 ctt 306  Q
    |||    
T  41327546 ctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 27316811 - 27316714
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||| | |||||||||||| || |||| |  ||| ||||| ||||| ||||||||||||||||||| ||||||||| || || ||||| ||||    
T  27316811 aaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 31680896 - 31681001
Alignment:
Q  201 taatttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactt 300  Q
    ||||| |||||||||||| | |||||| |||| ||||||||   ||||||||| || |  |||| |||||||||||||| |||||||||||| || ||||    
T  31680896 taattagaaaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactt 31680995  T
Q  301 tctctt 306  Q
    | ||||    
T  31680996 tatctt 31681001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 43514786 - 43514701
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||||||||||||||||| || ||||    |||||||||  |||| |||| || ||||||||||| ||||||||||||    
T  43514786 gaaaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaa 43514701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 43949903 - 43949802
Alignment:
Q  206 tgaaaaatgttacatgaacaccctttaat-catacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctc 304  Q
    ||||||||| |||||||||||||||| || | | || |  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||    
T  43949903 tgaaaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 43949804  T
Q  305 tt 306  Q
    ||    
T  43949803 tt 43949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 45490411 - 45490314
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||  |||| | |||||||  |||||||||  |||| |||| ||||| ||| ||||||||||||||||| || ||||| ||||    
T  45490411 aaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatctt 45490314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 43735741 - 43735841
Alignment:
Q  206 tgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctct 305  Q
    |||||||| ||||||||||| |||||| || ||||||  ||| ||||  ||||| ||||  ||||||||| ||| ||||||||||||||| ||||| |||    
T  43735741 tgaaaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatct 43735840  T
Q  306 t 306  Q
    |    
T  43735841 t 43735841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 39631097 - 39631200
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaat-catacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttc 302  Q
    ||||||||||| ||||||||| |||||| || | |||| |  |||||||||  |||| |||| |||||||||||||| |||||||||||| || |||||     
T  39631097 tttgaaaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacacttta 39631196  T
Q  303 tctt 306  Q
    ||||    
T  39631197 tctt 39631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 12496953 - 12497055
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| ||||||||| |||||||||||||| || ||||    ||||||||  ||||| ||||  ||||||||||||| ||||||| ||||||| ||||| |    
T  12496953 tttggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttat 12497052  T
Q  304 ctt 306  Q
    |||    
T  12497053 ctt 12497055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 23035982 - 23036079
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||  |||||| || |||| | |||||||||| | ||  |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  23035982 aaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 41847973 - 41848070
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||| ||||| |||||  ||| ||| |  ||||||||| ||||||||||  || ||||||| ||||||||| ||||| || ||||||||||    
T  41847973 aaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 306
Target Start/End: Complemental strand, 23204875 - 23204779
Alignment:
Q  210 aaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||| ||||| || ||||||  ||||||||  | ||| |||| ||||||||| |||| ||||| |||||| || ||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatctt 23204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 11825754 - 11825638
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  11825754 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctt 11825655  T
Q  307 tcatctcctctcccttt 323  Q
    |||||||||||||||||    
T  11825654 tcatctcctctcccttt 11825638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 43114559 - 43114673
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  43114559 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 43114658  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  43114659 atctcctctcccttt 43114673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 4299520 - 4299404
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||    
T  4299520 gaaaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatacttactctt 4299421  T
Q  307 tcatctcctctcccttt 323  Q
    | |||||||||||||||    
T  4299420 taatctcctctcccttt 4299404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 966932 - 966818
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| |  |||||||||||||||||||||| |||||||||||||||    
T  966932 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctttc 966833  T
Q  309 atctcctctcccttt 323  Q
    |||||| ||||||||    
T  966832 atctcccctcccttt 966818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 12415558 - 12415444
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||| || ||||||||| |||||||||||||||    
T  12415558 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12415459  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  12415458 atctcctctcccttt 12415444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 12427618 - 12427504
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||| || ||||||||| |||||||||||||||    
T  12427618 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12427519  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  12427518 atctcctctcccttt 12427504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 205 - 323
Target Start/End: Complemental strand, 41282076 - 41281958
Alignment:
Q  205 ttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctc 304  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||| ||| |||||||||||| |||||||||||    
T  41282076 ttgaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctc 41281977  T
Q  305 tttcatctcctctcccttt 323  Q
    |||||||||||||| ||||    
T  41281976 tttcatctcctctcacttt 41281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 18491707 - 18491821
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||| | ||||||||||||||||||||||| ||||||| |||||||    
T  18491707 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctttc 18491806  T
Q  309 atctcctctcccttt 323  Q
    ||||||| |||||||    
T  18491807 atctcctatcccttt 18491821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 34895835 - 34895725
Alignment:
Q  213 tgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttcatct 312  Q
    ||||||||||||||| |||||||| ||| | |||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||    
T  34895835 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 34895736  T
Q  313 cctctcccttt 323  Q
    |||||||||||    
T  34895735 cctctcccttt 34895725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 4452026 - 4451934
Alignment:
Q  231 taatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttcatctcctctcccttt 323  Q
    |||||||||||| ||||||||||   |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4452026 taatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctcctctcccttt 4451934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 16803970 - 16804074
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||  |||||||||| ||| |||||| ||| |||||||||||| |||||||||||||||    
T  16803970 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16804069  T
Q  309 atctc 313  Q
    |||||    
T  16804070 atctc 16804074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 16843252 - 16843356
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||  |||||||||| ||| |||||| ||| |||||||||||| |||||||||||||||    
T  16843252 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16843351  T
Q  309 atctc 313  Q
    |||||    
T  16843352 atctc 16843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 14285678 - 14285792
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||| |||||  ||||||||||||||||||| | |||||||||| | ||  ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  14285678 aaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctcagagtcatactttctctttc 14285777  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  14285778 atctcctctcccttt 14285792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 30838634 - 30838731
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||||| |||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  30838634 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 12531744 - 12531647
Alignment:
Q  225 accctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttcatctcctctcccttt 323  Q
    |||||||||||||||| |  |||||||||  || |||||| ||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12531744 accctttaatcatacacccaattgtacacctcaagcattatgggc-ttttggtaaattcatctcacaaccatactttctctttcatctcctctcccttt 12531647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 6518568 - 6518484
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||| |||||||||| ||| |||||||||| ||||||||||||    
T  6518568 gaaaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 34817874 - 34817777
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| ||| ||| |  ||||||||| ||||||| || | | ||||||||||||||||||||||| || ||||||||||    
T  34817874 aaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 43490511 - 43490402
Alignment:
Q  197 tttttaatttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcat 296  Q
    ||||||| | |||||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| ||||||||| || ||     
T  43490511 tttttaaatagaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccac 43490412  T
Q  297 actttctctt 306  Q
    ||||| ||||    
T  43490411 actttatctt 43490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 8896683 - 8896587
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||||||||||||||||||||||||| ||| ||||   ||||||||| | || || || | |||||||||||||||||||||||||||| |||||||    
T  8896683 gaaaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacactttct 8896587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 19047159 - 19047256
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||||   ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  19047159 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 19047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 1750416 - 1750513
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  1750416 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 4764824 - 4764727
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| |||||| |||| || |||| | |||||||||| ||||| ||||   ||||||||||||||||||||||||| || ||||| ||||    
T  4764824 aaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 13780833 - 13780736
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| |||||  |||| ||| ||| |  ||||||||| |||| ||||| |||||||||| |||||||||||||||| || ||||||||||    
T  13780833 aaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 12302351 - 12302254
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||| |  ||||||||| | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  12302351 aaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 16096749 - 16096846
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  ||| ||||| ||||| |||| |||||||||||| | || ||||||||| || ||||| ||||    
T  16096749 aaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 7070409 - 7070501
Alignment:
Q  200 ttaatttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    ||||| ||||||||||||||||||||||||||| |||||||||  ||||||  | ||||  |||  ||| |||||| ||||||||||| ||||    
T  7070409 ttaatatgaaaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaa 7070501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 33229301 - 33229396
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaat-catacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||| |||||||||||||||| || | |||| |  ||||||||| ||||| |||| |||||||||||||| ||||||  ||||||| |||||    
T  33229301 gaaaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 42026769 - 42026854
Alignment:
Q  209 aaaatgttacatgaacaccc--tttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    ||||||||||||||||||||  |||| ||||||||   ||||||||  ||  |||||| ||||||||||| |||||||||||||||    
T  42026769 aaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaa 42026854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 43335861 - 43335778
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    ||||||||| ||||||| | |||| || |||| |  ||||||||  ||||| |||| |||||||||||||| ||||||||||||    
T  43335861 aaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaa 43335778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 31513284 - 31513403
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| |||||||||||||||||| ||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31513284 tttggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttct 31513383  T
Q  304 ctttcatctcctctcccttt 323  Q
    ||||||||||||||||||||    
T  31513384 ctttcatctcctctcccttt 31513403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 31408731 - 31408617
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||||||||||||||||   |||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  31408731 aaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctttc 31408632  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  31408631 atctcctctcccttt 31408617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 40236921 - 40237035
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||| ||||||||||    
T  40236921 aaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctttc 40237020  T
Q  309 atctcctctcccttt 323  Q
    |||||||||| ||||    
T  40237021 atctcctctcacttt 40237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 33384872 - 33384987
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatca-tattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctcttt 307  Q
    ||||||||||||||||| | |||||||||||| |  ||||||| || |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  33384872 aaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctcttt 33384971  T
Q  308 catctcctctcccttt 323  Q
    ||||||||||||||||    
T  33384972 catctcctctcccttt 33384987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 27535329 - 27535219
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||||||||||||||||   |||||||||| |||||  |||| || |||||||||| ||||||||||||  ||||||||||||||    
T  27535329 aaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctttc 27535230  T
Q  309 atctcctctcc 319  Q
    |||||||||||    
T  27535229 atctcctctcc 27535219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 10573748 - 10573848
Alignment:
Q  206 tgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctct 305  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||| | ||||||||||||||||||||||||| || ||||| |||    
T  10573748 tgaaaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatct 10573847  T
Q  306 t 306  Q
    |    
T  10573848 t 10573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 42538534 - 42538432
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| |    
T  42538534 tttggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 42538435  T
Q  304 ctt 306  Q
    |||    
T  42538434 ctt 42538432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 5194329 - 5194232
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| |||| ||||||| |  ||||||||| | |||  |||||||||||||| ||||||||||||||||||| |||| |||||    
T  5194329 aaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactctt 5194232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 24001110 - 24001013
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  24001110 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 24280694 - 24280597
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||| ||||||||||||| ||||||| | |||| ||||  ||||||| ||   |||||||||||||||||||||||||||| ||||||||||    
T  24280694 aaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 45326026 - 45326119
Alignment:
Q  213 tgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||| |||||| |||| |||||||||| ||||||||| ||||  |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  45326026 tgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 4638299 - 4638200
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcataca-tcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctct 305  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||||| ||||  |||| |||||||||||||| |||||||||||| |||||||| |||    
T  4638299 gaaaaatgttacatgaacaccttttattcatacactca-attgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatct 4638201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 9216304 - 9216386
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||||||||||||||| || || ||| |||||||||| ||||||||||  ||||||||||||| ||||||||||||    
T  9216304 aaaatgttacatgaacaccctttattcctatatcctattgtacac-ccatgcattagagatattttggtaagttcatctcacaa 9216386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 44326178 - 44326272
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||||  |||  |||| |||||||||||||| |||||||||||| || |||||    
T  44326178 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttt 44326272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 43317445 - 43317542
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| |||| ||||||| |  ||||||||  | |||| ||| |||||||||| ||||||||||||||||||| |||| |||||    
T  43317445 aaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactctt 43317542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 44417037 - 44416935
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||||||||||||||||||||| | |||| |  |||| | |||||||||| ||||| |||| |||||||||| ||| |||||||||||| || ||||| |    
T  44417037 tttgaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttat 44416938  T
Q  304 ctt 306  Q
    |||    
T  44416937 ctt 44416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 35069723 - 35069820
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||| ||||| || |||| |  |||||||||  |||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  35069723 aaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 39998410 - 39998475
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatatttt 274  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| ||||| |||| |||||||||    
T  39998410 aaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 26898499 - 26898408
Alignment:
Q  210 aaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||||||||| |||| ||||||| |  ||||||||  ||||| |||| |||||||||||||| ||||||| |||| || |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacacttt 26898408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 43343724 - 43343625
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| | |||| |  |||| | |||||||||| ||||| |||| |||||||||| ||| |||||||||||| || ||||| ||||    
T  43343724 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 43343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 27393344 - 27393261
Alignment:
Q  223 acaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||| || |||||| |||||||||| | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 27393261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 5811027 - 5810925
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| |||||||||||||| ||||||||| || |||| |  ||||||||| | ||  |||| |||||||||| ||| |||||||||||| || ||||| |    
T  5811027 tttggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttat 5810928  T
Q  304 ctt 306  Q
    |||    
T  5810927 ctt 5810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 5015397 - 5015494
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||| ||||| |  ||||    |||||||||  |||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  5015397 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 32029879 - 32029818
Alignment:
Q  245 attgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||| ||||| |||| |||||||||||||||||||||| |||| || ||||| ||||    
T  32029879 attgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatctt 32029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 16180456 - 16180358
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||| |||||| |||| || |||| |  ||||||||| ||| | ||||   ||||||||||||||||||||||||| || ||||| ||||    
T  16180456 gaaaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatctt 16180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 42972854 - 42972937
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||| |||||| |||||| || ||||    |||||||||  |||| |||| |||||||||||||| ||||||||||||    
T  42972854 aaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaa 42972937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 205 - 323
Target Start/End: Complemental strand, 45821 - 45703
Alignment:
Q  205 ttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctc 304  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  | ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  45821 ttgaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctc 45722  T
Q  305 tttcatctcctctcccttt 323  Q
    |||||||||||||||||||    
T  45721 tttcatctcctctcccttt 45703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 27441540 - 27441658
Alignment:
Q  205 ttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctc 304  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  | ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  27441540 ttgaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctc 27441639  T
Q  305 tttcatctcctctcccttt 323  Q
    |||||||||||||||||||    
T  27441640 tttcatctcctctcccttt 27441658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 33242405 - 33242519
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  33242405 aaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctttc 33242504  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  33242505 atctcctctcccttt 33242519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 33253915 - 33254030
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctc-ttt 307  Q
    ||||||||||||||||||| |||||||| ||| | |||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||| || |||    
T  33253915 aaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttt 33254014  T
Q  308 catctcctctcccttt 323  Q
    ||||||||||||||||    
T  33254015 catctcctctcccttt 33254030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 3213402 - 3213499
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| ||||    
T  3213402 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 31109320 - 31109208
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||| ||||||| || |||||||||| |||||||| || || | || | ||||||||||    
T  31109320 aaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctttc 31109221  T
Q  309 atctcctctccct 321  Q
    |||||||||||||    
T  31109220 atctcctctccct 31109208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 7273433 - 7273336
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| | |||||||||| ||||| ||||  ||||||||||||| ||||||||||||||| ||||| ||||    
T  7273433 aaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatctt 7273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 13743319 - 13743222
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  13743319 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 13748819 - 13748722
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  13748819 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 206 - 301
Target Start/End: Complemental strand, 24204088 - 24203993
Alignment:
Q  206 tgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||||||||||||| |||| || |||| | |||||||||| ||||| |||| |||||||||||||| |||||||||||| || |||||    
T  24204088 tgaaaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacacttt 24203993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 9698431 - 9698334
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  9698431 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 21293775 - 21293678
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| ||||||||||| ||||||||   | ||||||| ||||| ||||||||||||||||||||||||| |||||| || ||||| ||||    
T  21293775 aaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 26670107 - 26670010
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  |||||||||  |||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  26670107 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 30014345 - 30014442
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||| ||||  ||||| |||| | |||||||||||| |||||||||||| |||||||| ||||    
T  30014345 aaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 21279931 - 21280028
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||||   |||| |||  ||||| |||| ||||||||||||||||||||||||||| || ||||| ||||    
T  21279931 aaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 26466801 - 26466898
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| ||||||||||| || |||| |  ||||||||| ||||| |||| || ||||||||||| |||||||||||| || ||||| ||||    
T  26466801 aaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 30735982 - 30736081
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||||  |||| || |||| |  |||||||||  |||| ||||  ||||||||||||| ||||||||||||||| ||||| ||||    
T  30735982 gaaaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatctt 30736081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 7292749 - 7292846
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||| ||||||| |||| ||||||| |  ||| ||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  7292749 aaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 7367551 - 7367643
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    ||||||||| ||||||| | |||| ||||||| |  ||||||||  ||||| |||| |||||||||||||| |||||||||||| || |||||    
T  7367551 aaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacacttt 7367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 5e-44; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 10457990 - 10457876
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10457990 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 10457891  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  10457890 atctcctctcccttt 10457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 52628075 - 52627961
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52628075 aaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctttc 52627976  T
Q  309 atctcctctcccttt 323  Q
    |||| ||||||||||    
T  52627975 atcttctctcccttt 52627961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 25996270 - 25996384
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  25996270 aaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaaccatattttctctttc 25996369  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  25996370 atctcctctcccttt 25996384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 9434126 - 9434240
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||||||||||||||||||   |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  9434126 aaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 9434225  T
Q  309 atctcctctcccttt 323  Q
    |||||||||| ||||    
T  9434226 atctcctctcacttt 9434240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 4190363 - 4190249
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | ||||||||||   ||| ||||  |||||||||||||||||||||||||| |||||||||||||||    
T  4190363 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctttc 4190264  T
Q  309 atctcctctcccttt 323  Q
    ||||||| |||||||    
T  4190263 atctcctttcccttt 4190249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 34791831 - 34791945
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||| ||| |||||  ||| |||||||||||| |||||||||||||||    
T  34791831 aaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctttc 34791930  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  34791931 atctcctctcccttt 34791945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 51757595 - 51757709
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||| |||||| ||||||||||||||||||| | ||||||||||  ||||||||| ||| ||||| |||| |||||||||||| |||||||||||||||    
T  51757595 aaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctttc 51757694  T
Q  309 atctcctctcccttt 323  Q
    ||||||||| |||||    
T  51757695 atctcctcttccttt 51757709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 46941055 - 46941152
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  46941055 aaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 45127026 - 45126934
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || |||||    
T  45127026 aaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 45126934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 54237098 - 54237195
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  54237098 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 54237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 42100690 - 42100773
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| ||||| |||| |||||||||||||| ||||||||||||    
T  42100690 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaa 42100773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 42394517 - 42394420
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||||   ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  42394517 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 51249357 - 51249407
Alignment:
Q  256 catgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  51249357 catgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 40808867 - 40808964
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||| |||||| |||| || |||| |  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  40808867 aaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40808964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 29558330 - 29558246
Alignment:
Q  211 aatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatca 295  Q
    ||||||| |||||||||||||| |||||||||  ||||||||| | ||  |||| | |||| |||||||||||||||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaatca 29558246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 27748563 - 27748662
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||||| |||| ||||||| |  ||| |||||   ||| |||| |||||||||||||| ||||||||||||  ||||||| ||||    
T  27748563 gaaaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatctt 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 24688500 - 24688403
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  ||||    ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  24688500 aaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 25413683 - 25413780
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  |||||||||   ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  25413683 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 36150132 - 36150229
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||| |||||||| ||||||| |  ||| ||||| | ||| || | |||||||||||||| |||||||||||| || ||||| ||||    
T  36150132 aaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 40480751 - 40480848
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |||||   |  ||||||||  | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  40480751 aaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 47191123 - 47191027
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| ||||| ||||  ||||||||| ||| |||||||||||| || ||||| ||||    
T  47191123 aaaatgttacatgaacaccctttattcctacacctcattgtacac-ccatgtattagagatattttgataagttcatctcacaaccacactttatctt 47191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 54246246 - 54246149
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| | ||| ||||  |||||||| |||| |||||||||||| || ||||| ||||    
T  54246246 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 53581958 - 53581859
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||| ||||| |||||||    ||||||||  | ||| |||| |||||||||| ||| |||||||||||| || ||||| ||||    
T  53581958 gaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatctt 53581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 53273746 - 53273684
Alignment:
Q  245 attgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctcttt 307  Q
    ||||||||  ||||| |||| |||||||||||||| |||||||||||| |||||||| |||||    
T  53273746 attgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 35559 - 35440
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| |||||||||||| |||||| |||||||||||| |||||||||||| |||||||||| ||| || |||||||||||||||||||| ||||||||||    
T  35559 tttggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttct 35460  T
Q  304 ctttcatctcctctcccttt 323  Q
    ||||||||||||||||||||    
T  35459 ctttcatctcctctcccttt 35440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 35181518 - 35181632
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  35181518 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 35181617  T
Q  309 atctcctctcccttt 323  Q
    |||||||||| ||||    
T  35181618 atctcctctcacttt 35181632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 16603724 - 16603610
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||| |||||||||||||||||| | |||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||||| |||||||    
T  16603724 aaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctttc 16603625  T
Q  309 atctcctctcccttt 323  Q
    |||||||||||||||    
T  16603624 atctcctctcccttt 16603610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 34304790 - 34304904
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    ||||||||||||||||| |||||||||||||| | |||||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  34304790 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 34304889  T
Q  309 atctcctctcccttt 323  Q
    |||||||||| ||||    
T  34304890 atctcctctcacttt 34304904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 18066816 - 18066706
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctttc 308  Q
    |||||||||||||||||||||||||||||||||  |||||||||  ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||||    
T  18066816 aaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctttc 18066717  T
Q  309 atctcctctcc 319  Q
    |||||||||||    
T  18066716 atctcctctcc 18066706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 16358932 - 16358817
Alignment:
Q  209 aaaatgttacat-gaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctcttt 307  Q
    |||||||||||| ||| |||||||||||||||| | |||||||||  |||||||||||| |||||||| |||||||||||||||| |||||||||| |||    
T  16358932 aaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttcttttt 16358833  T
Q  308 catctcctctcccttt 323  Q
    ||||||||||||||||    
T  16358832 catctcctctcccttt 16358817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 33630093 - 33629977
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||| |||||||||||||||||||| |  ||||||||| | |||||||| ||| ||||| |||| ||||||||||||  ||||||||||||    
T  33630093 gaaaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T
Q  307 tcatctcctctcccttt 323  Q
    |||||||||||||||||    
T  33629993 tcatctcctctcccttt 33629977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 19386668 - 19386549
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgc-----catgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||||||||||||||||||||||||||||||| | |||| |||   |     ||||||||||| || ||||| ||||||||||||||||  |||||||||    
T  19386668 aaaatgttacatgaacaccctttaatcatacaccctattatactttctctttcatgcattaagaatgttttgataaattcatctcacaactatactttct 19386569  T
Q  304 ctttcatctcctctcccttt 323  Q
    ||||||||||||||||||||    
T  19386568 ctttcatctcctctcccttt 19386549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 10678198 - 10678136
Alignment:
Q  261 attaaggatattttggtaaattcatctcacaatcatactttctctttcatctcctctcccttt 323  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10678198 attaaggacattttggtaaattcatctcacaaccatactttctctttcatctcctctcccttt 10678136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 29801050 - 29800951
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  29801050 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 29800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 42295195 - 42295294
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||||| || |||| |  ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  42295195 gaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 11582768 - 11582865
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  11582768 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 36743581 - 36743484
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  36743581 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 26125634 - 26125734
Alignment:
Q  206 tgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctct 305  Q
    ||||||||||||||| ||||||||||| ||||||||   ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| |||    
T  26125634 tgaaaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 26125733  T
Q  306 t 306  Q
    |    
T  26125734 t 26125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 20148760 - 20148854
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatacttt 301  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||||  |||  |||| |||||||||||||| |||||||||||| || |||||    
T  20148760 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttt 20148854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 31384672 - 31384763
Alignment:
Q  215 ttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||| || |||||  |||||||||| ||||| |||| | |||||||||||| |||||||||||| || ||||| ||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatctt 31384763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 5754905 - 5755002
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| |||| || ||||||  ||||||||  ||||  |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  5754905 aaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 29705364 - 29705461
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||| |  ||||||||| ||||| |||| |||||||||| ||| |||||||||||| || ||||| ||||    
T  29705364 aaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 30660840 - 30660743
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  ||||||  ||||||||| | ||| |||| |||||||||||||| ||||||| |||| || ||||| ||||    
T  30660840 aaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T

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Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 30912662 - 30912577
Alignment:
Q  207 gaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||||||||||||||||||| || |||| |  |||||||||  |||| |||| || ||||||||||| ||||||||||||    
T  30912662 gaaaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaa 30912577  T

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Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 1375544 - 1375627
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    ||||| ||||||||||||| |||| ||||||| |  ||||||||| ||||  |||| ||||||||||||||||| |||||||||    
T  1375544 aaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaa 1375627  T

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Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 42699248 - 42699351
Alignment:
Q  198 ttttaatttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcata 297  Q
    |||||||  |||||||||||||||||||||||||| || |||| |  |||||||||   ||| |||| ||||||||| |||| |||||||||||| || |    
T  42699248 ttttaataagaaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccaca 42699347  T
Q  298 cttt 301  Q
    ||||    
T  42699348 cttt 42699351  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 42197533 - 42197436
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||||||||||||||| |||| || |||| |  |||| |||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  42197533 aaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T

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Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 45397318 - 45397401
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaa 292  Q
    |||||||||| ||||||||||||| || |||| |  ||| ||||| | ||| |||| ||||||||| |||| ||||||||||||    
T  45397318 aaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaa 45397401  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 2166061 - 2165964
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||| ||||||||||||| |||| || |||| |  |||||| || ||||| ||||  ||||||||||||| ||||||||| || || ||||| ||||    
T  2166061 aaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T

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Target: scaffold0119 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 687 - 784
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||| |  |||||||||  |||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  687 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T

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Target: scaffold0038 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 112657 - 112754
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| || |||||   ||||||||| | ||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  112657 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 112754  T

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Target: scaffold0385 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 11253 - 11350
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    ||||||| |||||||||| ||||| ||||||| |  ||||||||| ||||  |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  11253 aaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T

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Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 23524 - 23422
Alignment:
Q  204 tttgaaaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttct 303  Q
    |||| ||||||||| |||||||||||||| || ||||    ||||||||  ||||| ||||  ||||||||||||| ||||||| ||||||| ||||| |    
T  23524 tttggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttat 23425  T
Q  304 ctt 306  Q
    |||    
T  23424 ctt 23422  T

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Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 14286 - 14189
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||| |  ||||||||  | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  14286 aaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T

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Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 24614 - 24517
Alignment:
Q  209 aaaatgttacatgaacaccctttaatcatacatcatattgtacacgccatgcattaaggatattttggtaaattcatctcacaatcatactttctctt 306  Q
    |||||||||||||||||||||||| |  |||| |  ||||||||  | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  24614 aaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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