View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15035_low_11 (Length: 320)

Name: NF15035_low_11
Description: NF15035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15035_low_11
NF15035_low_11
[»] chr2 (20 HSPs)
chr2 (1-301)||(6190918-6191218)
chr2 (4-135)||(31994766-31994899)
chr2 (23-125)||(35954229-35954330)
chr2 (1-125)||(10077609-10077732)
chr2 (1-125)||(34904015-34904139)
chr2 (1-92)||(855602-855693)
chr2 (1-125)||(8794581-8794701)
chr2 (13-95)||(29242613-29242695)
chr2 (13-92)||(24490604-24490683)
chr2 (4-90)||(39293153-39293239)
chr2 (43-111)||(11711229-11711297)
chr2 (13-89)||(30632589-30632665)
chr2 (13-132)||(30669058-30669177)
chr2 (13-81)||(30666666-30666734)
chr2 (13-78)||(30620957-30621022)
chr2 (13-78)||(30623578-30623643)
chr2 (9-125)||(30641073-30641189)
chr2 (22-92)||(43321471-43321541)
chr2 (55-92)||(37284276-37284313)
chr2 (52-92)||(434612-434652)
[»] chr8 (23 HSPs)
chr8 (4-117)||(26938647-26938760)
chr8 (4-117)||(26938908-26939019)
chr8 (1-125)||(12596858-12596982)
chr8 (1-117)||(10467524-10467640)
chr8 (3-86)||(39344626-39344709)
chr8 (3-125)||(24916081-24916201)
chr8 (10-117)||(8026029-8026136)
chr8 (15-135)||(24292234-24292356)
chr8 (41-89)||(2414911-2414959)
chr8 (13-125)||(17153542-17153654)
chr8 (9-88)||(17157025-17157104)
chr8 (9-88)||(17219752-17219831)
chr8 (1-92)||(33038252-33038343)
chr8 (1-82)||(32796980-32797061)
chr8 (23-95)||(30743926-30743998)
chr8 (16-108)||(42024041-42024132)
chr8 (1-112)||(33695139-33695249)
chr8 (22-92)||(16483781-16483850)
chr8 (27-125)||(43651364-43651462)
chr8 (23-112)||(15966443-15966532)
chr8 (52-107)||(35865892-35865947)
chr8 (52-107)||(41828016-41828071)
chr8 (74-123)||(16483968-16484017)
[»] chr5 (15 HSPs)
chr5 (1-125)||(39058497-39058621)
chr5 (1-125)||(26724115-26724239)
chr5 (1-115)||(38948537-38948651)
chr5 (9-92)||(38607333-38607416)
chr5 (3-125)||(14820457-14820579)
chr5 (43-95)||(5459219-5459271)
chr5 (27-125)||(21114573-21114671)
chr5 (1-125)||(19343556-19343680)
chr5 (3-95)||(36235788-36235880)
chr5 (1-92)||(16089722-16089813)
chr5 (52-107)||(2160372-2160427)
chr5 (26-93)||(26188823-26188889)
chr5 (58-107)||(3137151-3137200)
chr5 (22-92)||(39125870-39125940)
chr5 (43-80)||(2299298-2299335)
[»] scaffold0233 (1 HSPs)
scaffold0233 (2-125)||(16964-17087)
[»] chr6 (19 HSPs)
chr6 (3-125)||(6197815-6197936)
chr6 (9-125)||(3807073-3807189)
chr6 (9-125)||(24672274-24672390)
chr6 (4-125)||(4405818-4405938)
chr6 (12-125)||(10311642-10311755)
chr6 (16-125)||(10516624-10516733)
chr6 (33-125)||(4409526-4409617)
chr6 (10-122)||(30465206-30465318)
chr6 (23-125)||(25042896-25042997)
chr6 (1-92)||(3336026-3336117)
chr6 (133-242)||(27775548-27775657)
chr6 (1-125)||(17957034-17957158)
chr6 (24-89)||(12611835-12611900)
chr6 (52-107)||(17141877-17141932)
chr6 (26-92)||(32003124-32003190)
chr6 (58-94)||(10313317-10313353)
chr6 (49-92)||(14896838-14896881)
chr6 (243-291)||(27775521-27775567)
chr6 (29-125)||(17158490-17158586)
[»] chr7 (18 HSPs)
chr7 (13-130)||(34471222-34471339)
chr7 (4-122)||(27567709-27567827)
chr7 (9-125)||(25067656-25067772)
chr7 (9-88)||(11297799-11297878)
chr7 (10-112)||(30851685-30851787)
chr7 (1-76)||(13009405-13009480)
chr7 (10-100)||(40751680-40751770)
chr7 (4-80)||(28098581-28098655)
chr7 (1-125)||(20132058-20132182)
chr7 (53-125)||(28555285-28555357)
chr7 (1-92)||(12925250-12925341)
chr7 (4-78)||(2316118-2316191)
chr7 (43-89)||(21367210-21367256)
chr7 (1-125)||(43617069-43617193)
chr7 (52-107)||(41232860-41232915)
chr7 (43-84)||(8894549-8894590)
chr7 (31-80)||(39596814-39596863)
chr7 (9-89)||(28565089-28565169)
[»] chr4 (16 HSPs)
chr4 (1-125)||(40390894-40391017)
chr4 (4-122)||(33609950-33610069)
chr4 (1-122)||(15025785-15025906)
chr4 (1-108)||(31050015-31050122)
chr4 (54-125)||(38377812-38377883)
chr4 (9-107)||(22593332-22593430)
chr4 (24-81)||(47472233-47472290)
chr4 (24-108)||(10573973-10574057)
chr4 (49-125)||(15882219-15882295)
chr4 (43-108)||(33894467-33894532)
chr4 (4-108)||(6449713-6449817)
chr4 (4-81)||(6156075-6156152)
chr4 (133-201)||(29291241-29291309)
chr4 (49-92)||(14806131-14806174)
chr4 (43-112)||(30801956-30802024)
chr4 (43-95)||(7117000-7117052)
[»] chr3 (20 HSPs)
chr3 (10-125)||(20336785-20336900)
chr3 (15-125)||(39340775-39340885)
chr3 (1-117)||(20314900-20315016)
chr3 (1-125)||(34359335-34359459)
chr3 (1-80)||(28769546-28769625)
chr3 (43-101)||(13899492-13899550)
chr3 (10-76)||(16876437-16876503)
chr3 (10-95)||(22853421-22853504)
chr3 (51-133)||(52423004-52423086)
chr3 (12-122)||(50334686-50334796)
chr3 (1-125)||(44446892-44447016)
chr3 (26-89)||(38673349-38673412)
chr3 (23-113)||(17268847-17268937)
chr3 (1-94)||(45743765-45743858)
chr3 (49-92)||(16607660-16607703)
chr3 (27-77)||(9766048-9766098)
chr3 (68-108)||(16876101-16876141)
chr3 (43-107)||(18085360-18085424)
chr3 (43-95)||(28997853-28997905)
chr3 (55-115)||(50358479-50358539)
[»] chr1 (15 HSPs)
chr1 (1-108)||(20985949-20986056)
chr1 (11-125)||(33753010-33753123)
chr1 (4-92)||(13392847-13392935)
chr1 (22-108)||(1444985-1445070)
chr1 (27-92)||(3891483-3891548)
chr1 (43-95)||(37471014-37471066)
chr1 (54-92)||(50919373-50919411)
chr1 (10-95)||(29102871-29102956)
chr1 (52-107)||(14941096-14941151)
chr1 (52-107)||(14951103-14951158)
chr1 (52-107)||(14955344-14955399)
chr1 (9-92)||(16545458-16545540)
chr1 (31-117)||(29307657-29307743)
chr1 (43-102)||(15800836-15800895)
chr1 (43-100)||(50773681-50773734)
[»] scaffold0020 (1 HSPs)
scaffold0020 (9-95)||(152218-152304)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-75)||(48466-48540)
[»] scaffold0720 (1 HSPs)
scaffold0720 (9-125)||(5513-5629)
[»] scaffold0478 (2 HSPs)
scaffold0478 (13-125)||(8604-8716)
scaffold0478 (51-125)||(3226-3300)
[»] scaffold1911 (1 HSPs)
scaffold1911 (13-88)||(22-97)
[»] scaffold0264 (1 HSPs)
scaffold0264 (24-90)||(19789-19855)
[»] scaffold0005 (2 HSPs)
scaffold0005 (49-92)||(33553-33596)
scaffold0005 (23-92)||(253807-253876)
[»] scaffold0002 (1 HSPs)
scaffold0002 (49-92)||(363160-363203)
[»] scaffold0536 (1 HSPs)
scaffold0536 (54-110)||(3875-3931)


Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 6191218 - 6190918
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6191218 tgtaaaaagttttcaaaatacggactattcttacaaagtacaatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacta 6191119  T
Q  101 gtgattttatagagacttaaaacatttaacccaaactaaaattagccaaccaatcaacacatttgtttctctcacgccatgtgtgattaaaagcaatatt 200  Q
     |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6191118 atgattttatagatactaaaaacatttaacccaaactaaaattagccaaccaatcaacacatttgtttctctcacgccatgtgtgattaaaagcaatatt 6191019  T
Q  201 gtcatgtaaactaacaagatcctgaatacaacagaccaagattgaatacggcagaccaagatagaggcgtgtctattaagcttacaactccctgttaccc 300  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  6191018 gtcatgtaaactaacaagatcctgaatacagcagacaaagattgaatacagcagaccaaaatagaggcgtgtctattaagcttacaactccctattaccc 6190919  T
Q  301 t 301  Q
    |    
T  6190918 t 6190918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 31994766 - 31994899
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtg 103  Q
    |||| |||||||||||  |||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||| ||||| ||||||| || | |||||    
T  31994766 aaaaagttttcaaaattgggactattcttacaaattacaatattatggagaactaaaattactattaaaattttaaagggattaaacttaaaaatttgtg 31994865  T
Q  104 attttatagagacttaaaacat--ttaacccaaa 135  Q
    ||||| ||| |||| |||||||  ||||||||||    
T  31994866 attttgtagggactaaaaacatacttaacccaaa 31994899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 35954330 - 35954229
Alignment:
Q  23 gactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaa 122  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| || |||||||| ||||||| |||| ||||    
T  35954330 gactattcttacaaactacaatattattgaggactaaaattaccattaaaatttaatagggactaaactttaaaacttgtga-tttatagggactaaaaa 35954232  T
Q  123 cat 125  Q
    |||    
T  35954231 cat 35954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 10077732 - 10077609
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| ||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |||     
T  10077732 tgtaaaaagttttcaaaatagggactattattacaaactacaatattatgaaggattaaaattaccattaaaa-tttatagggactaaacttgaaaactc 10077634  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     |||||||  | ||||| |||||||    
T  10077633 atgattttgcaaagactaaaaacat 10077609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34904139 - 34904015
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| ||| |||||||||||| ||| |||||||| || ||||||||||  |||| ||||||| ||||||||||||| || ||||    
T  34904139 tgtaaaaagttttcaaaatagggattattcttacaaactacaatattatgaagaactaaaattattattacaattttacagggactaaacttaaaaactt 34904040  T
Q  101 gtgattttatagagacttaaaacat 125  Q
    |||||||| ||| |||| |||||||    
T  34904039 gtgattttgtagggactaaaaacat 34904015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 855693 - 855602
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||| |||||||||||| ||||||||| |||||| ||| |||| |  ||||||||||||||||||||||||||||||||||||||||||    
T  855693 tgtaaaaagttttcaaaatatggactattcctacaaactacaatatcaccgaggactaaaattaccattaaaattttatagggactaaactt 855602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8794701 - 8794581
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||| |||||| ||||||||||||| || ||| ||||||||||   ||||||||||||||||||||||||| |||||||||||||| | ||    
T  8794701 tgtaaaaagtttttaaaatagggactattcttacgaattacaatattatgga---ctaaaattaccattaaaattttata-ggactaaacttgaaaattt 8794606  T
Q  101 gtgattttatagagacttaaaacat 125  Q
    |||||||| ||| |||| |||||||    
T  8794605 gtgattttgtagggactgaaaacat 8794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 29242613 - 29242695
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    |||||||| |||||||||||||||| ||  ||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  29242613 tcaaaatagggactattcttacaaactataatatcttcgaggactaaaattaccattaaaattttatagggactaaacttgaa 29242695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 24490604 - 24490683
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||| ||| |||||||||||| ||| ||||| | ||||||||||||||| ||||||||||||||| ||||||||||    
T  24490604 tcaaaatagggattattcttacaaactacaatattgtagaggactaaaattactattaaaattttatagagactaaactt 24490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 39293153 - 39293239
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaac 90  Q
    |||| ||||| |||||| | |||||| ||||||| ||| ||||| | |||||||||||||||||||||||||||||||||| |||||    
T  39293153 aaaatgtttttaaaataggaactattattacaaattacaatattttagaggactaaaattaccattaaaattttatagggattaaac 39293239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 11711229 - 11711297
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttata 111  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||||||||||||  || |||||||||||    
T  11711229 atattatggaggattaaacttacacttaaaattttatagggactaaacttgaaagctcgtgattttata 11711297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 30632589 - 30632665
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaa 89  Q
    |||||||| ||||||||  |||||| ||| |||||||  | |||||||||||||||||||||||||||| |||||||    
T  30632589 tcaaaatagggactatttgtacaaactacaatattatccaagactaaaattaccattaaaattttatagagactaaa 30632665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 30669058 - 30669177
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatag 112  Q
    |||||||| ||||||||  |||||| ||  |||||||  | |||||||||||||||||||||||||||| ||||||| || || |||| ||| ||| |||    
T  30669058 tcaaaatagggactatttgtacaaactataatattattcaagactaaaattaccattaaaattttatagagactaaaattaaaaacttctgaatttttag 30669157  T
Q  113 agacttaaaacatttaaccc 132  Q
    | ||| || | |||||||||    
T  30669158 atactaaacatatttaaccc 30669177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 30666666 - 30666734
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatag 81  Q
    |||||||| ||||||||  |||||| ||| |||||||  | ||||||||||||||||||||||||||||    
T  30666666 tcaaaatagggactatttgtacaaactacaatattattcaagactaaaattaccattaaaattttatag 30666734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 30620957 - 30621022
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaatttta 78  Q
    |||||||| ||||||||  |||||| ||| |||||||  | |||||||||||||||||||||||||    
T  30620957 tcaaaatagggactatttgtacaaactacaatattattcaagactaaaattaccattaaaatttta 30621022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 30623578 - 30623643
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaatttta 78  Q
    |||||||| ||||||||  |||||| ||| |||||||  | |||||||||||||||||||||||||    
T  30623578 tcaaaatagggactatttgtacaaactacaatattattcaagactaaaattaccattaaaatttta 30623643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 30641073 - 30641189
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||||| |||||| | ||||||| ||  |||||  |||||||||||  |||||||||||||| ||| ||||||| ||| || |||  |||| ||    
T  30641073 gttttcaaaatagggactacttttacaaactaaaatatttcggaggactaaatataccattaaaatttcatatggactaagcttaaaaactcatgatatt 30641172  T
Q  109 atagagacttaaaacat 125  Q
     ||| |||| |||||||    
T  30641173 gtagggactaaaaacat 30641189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 43321541 - 43321471
Alignment:
Q  22 ggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||||| |||||| | | ||||||||||| | ||||||||| |||| ||||| |||| ||||||||||    
T  43321541 ggactattcctacaaattgcaatattatggagaaataaaattacgattagaatttaatagagactaaactt 43321471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 37284276 - 37284313
Alignment:
Q  55 actaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||| | |||||||||||||||||||||||||||    
T  37284276 actaaaatcatcattaaaattttatagggactaaactt 37284313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 434612 - 434652
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  434612 aggactaaaatcaccattaaaattttatattgactaaactt 434652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 26938647 - 26938760
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtg 103  Q
    |||| |||||||||||| |||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||    
T  26938647 aaaaagttttcaaaatagggactattcttacaaactactaaattatggaggacaaaaattaccattaaaattttatagggactaaacttgaaaacttatg 26938746  T
Q  104 attttatagagact 117  Q
    ||||||||| ||||    
T  26938747 attttatagggact 26938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 26938908 - 26939019
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtg 103  Q
    |||| |||||||||||| ||||||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  26938908 aaaaagttttcaaaatagggactattcttacaaa--actaaattatggaggactaaaattaccattaaaattttatagggactaaacttgaaaacttatg 26939005  T
Q  104 attttatagagact 117  Q
    ||||||||| ||||    
T  26939006 attttatagggact 26939019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 12596982 - 12596858
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||||||||||  ||||| | ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  12596982 tgtaaaatgttttcaaaatagagactaattttacaaactacaatattttggaggactaaaattaccattaaaattttatagggactaaacttaaaaactt 12596883  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     ||||||| |||||||| |||||||    
T  12596882 atgattttgtagagactaaaaacat 12596858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10467524 - 10467640
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| |||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||| || | ||    
T  10467524 tgtaaaaagttttcaaaatagggactattcttacaagttacaatattatggaggattaaaattaccattaaaattttataaggaataaacttaaaaattt 10467623  T
Q  101 gtgattttatagagact 117  Q
    |||||||| ||||||||    
T  10467624 gtgattttgtagagact 10467640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 39344709 - 39344626
Alignment:
Q  3 taaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggact 86  Q
    |||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  39344709 taaaaggttttcaaaatatgaactattcttacaaactacaatattatggaggactaaagttaccattaaaattttatagggact 39344626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 24916081 - 24916201
Alignment:
Q  3 taaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgt 102  Q
    ||||| |||| ||||||| |||||||| ||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || |||  |    
T  24916081 taaaaagtttccaaaata-ggactatttttacaaactac-atattttggaggacgaaaattaccattaaaattttatagggactaaacttaaaaactcat 24916178  T
Q  103 gattttatagagacttaaaacat 125  Q
    |||||||||  |||| |||||||    
T  24916179 gattttatatggactaaaaacat 24916201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 8026136 - 8026029
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttta 109  Q
    |||| |||||| |||||||||||||||| ||| | |||||||||||||| ||| |||||||||||||||||| || ||||||| || | |||| ||||||    
T  8026136 tttttaaaatagggactattcttacaaactactaaattatggaggactacaatcaccattaaaattttatagagattaaactttaaaatttgtaatttta 8026037  T
Q  110 tagagact 117  Q
    ||| ||||    
T  8026036 tagggact 8026029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 24292234 - 24292356
Alignment:
Q  15 aaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagag 114  Q
    |||||| ||||| ||||||||||   | || ||||| |||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||| ||| |    
T  24292234 aaaatagggactgttcttacaaacatcaattttatgaaggactaaaattacaattaaaatttaatagggactaaacttgaaagcttgtgattttttaggg 24292333  T
Q  115 acttaaa--acatttaacccaaa 135  Q
    ||| |||  ||||||||||||||    
T  24292334 actaaaaacacatttaacccaaa 24292356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 2414959 - 2414911
Alignment:
Q  41 cgatattatggaggactaaaattaccattaaaattttatagggactaaa 89  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2414959 cgatattatagaggactaaaattaccattaaaattttatagggactaaa 2414911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 17153654 - 17153542
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatag 112  Q
    |||||||| |||||||| | ||||| |   ||||| |||||||||||||||||||||||||||| ||||||||||| ||| || |||  ||||||| |||    
T  17153654 tcaaaatagggactattttaacaaacttaaatattttggaggactaaaattaccattaaaatttcatagggactaagcttaaaaactcatgattttgtag 17153555  T
Q  113 agacttaaaacat 125  Q
     |||| |||||||    
T  17153554 ggactaaaaacat 17153542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 17157025 - 17157104
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaa 88  Q
    |||||||||||| || ||||| | ||||| ||  ||||| |||||||||||||||||||||||||||| |||||||||||    
T  17157025 gttttcaaaataggggctattttaacaaactaaaatattttggaggactaaaattaccattaaaatttcatagggactaa 17157104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 17219752 - 17219831
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaa 88  Q
    |||||||||||| |||||||| ||||||| ||  |||||  | ||||||||||||||||||||||||| |||||||||||    
T  17219752 gttttcaaaatagggactatttttacaaactaaaatatttagaaggactaaaattaccattaaaatttcatagggactaa 17219831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33038343 - 33038252
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||| ||||| |||||| | |||||||||||||| | | ||||||||||||| |||||||  ||||||||||| ||||| |||||||||    
T  33038343 tgtaaaaagtttttaaaataggaactattcttacaaactgcaatattatggaggattaaaattttcattaaaatttaataggaactaaactt 33038252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32797061 - 32796980
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagg 82  Q
    ||||||| ||||| |||||| |||||||||||||||| ||| ||| | | ||||||||||||||| ||||||| ||||||||    
T  32797061 tgtaaaaagtttttaaaatatggactattcttacaaactacaatactttagaggactaaaattactattaaaaatttatagg 32796980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 30743998 - 30743926
Alignment:
Q  23 gactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    ||||||| ||||||| ||| ||||||| |||||||||||||| ||||||| ||||||||| |||||| |||||    
T  30743998 gactatttttacaaactacaatattattgaggactaaaattaacattaaagttttataggtactaaatttgaa 30743926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 42024041 - 42024132
Alignment:
Q  16 aaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    ||||| |||||||| ||||||  ||| ||||| |||||||||||||||| |||||||||||||| |||||||||||  || ||| ||||||||    
T  42024041 aaatagggactattattacaac-tacaatattttggaggactaaaattagcattaaaattttatggggactaaactcaaaaactcgtgatttt 42024132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33695249 - 33695139
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    |||||||  |||||||||||  |||||||||||||| |||  ||||| | |||||||||||||| ||||||| |||||||  ||||||||||||| |||     
T  33695249 tgtaaaatcttttcaaaataaagactattcttacaa-gtataatattgtagaggactaaaattatcattaaagttttataaagactaaacttgaaaactc 33695151  T
Q  101 gtgattttatag 112  Q
     | |||||||||    
T  33695150 ataattttatag 33695139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 16483850 - 16483781
Alignment:
Q  22 ggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||| ||||||| ||| ||||| || || |||||||||||||||||||||||| |||||||||||||    
T  16483850 ggactatttttacaaactacaatattttgaag-actaaaattaccattaaaattttacagggactaaactt 16483781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 43651462 - 43651364
Alignment:
Q  27 attcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    ||||||||||| ||| ||||| ||| |||||||||||| |||||||||||| |||  ||||||||| ||   || |||||||||||| ||| |||||||    
T  43651462 attcttacaaactacaatattgtggtggactaaaattatcattaaaattttctagaaactaaacttaaaagtttctgattttatagatactaaaaacat 43651364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 15966532 - 15966443
Alignment:
Q  23 gactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatag 112  Q
    ||||||||||||||| | | ||| |||| | |||||||| |||||||||||||| ||||  | |||||||||| |||  |||||||||||    
T  15966532 gactattcttacaaaatgcaatagtatgaaagactaaaagtaccattaaaatttaatagcaaataaacttgaaaactcatgattttatag 15966443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 35865947 - 35865892
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||| ||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  35865947 aggattaaaattaccattaaaattttatatcaactaaacttaaaaacttgtgattt 35865892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 41828071 - 41828016
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||| ||||||||||||||||||||||||  |||||||||| || |||| ||||||    
T  41828071 aggattaaaattaccattaaaattttatatcgactaaacttaaaaacttatgattt 41828016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 16483968 - 16484017
Alignment:
Q  74 ttttatagggactaaacttgaatacttgtgattttatagagacttaaaac 123  Q
    ||||||| |||||||||||||| |||||| ||||||||| |||| |||||    
T  16483968 ttttataaggactaaacttgaaaacttgtaattttatagggactaaaaac 16484017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39058497 - 39058621
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||  ||||||| || ||||    
T  39058497 tgtaaaaagttttcaaaataaggactattcttacaaactacaatgttatggaggactaaaattaccattaaaattttataggggttaaacttaaaaactt 39058596  T
Q  101 gtgattttatagagacttaaaacat 125  Q
    |||||||||||| || | |||||||    
T  39058597 gtgattttatagggattaaaaacat 39058621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26724239 - 26724115
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| ||||| |||||| ||| ||| ||  |||||| |||||||||||||||||||||||||||||||||||||| ||| |||     
T  26724239 tgtaaaaagttttcaaaatagggactgttcttataaattacaattctatggacgactaaaattaccattaaaattttatagggactaaactcgaaaactc 26724140  T
Q  101 gtgattttatagagacttaaaacat 125  Q
    |||||||| ||| |||| |||||||    
T  26724139 gtgattttgtagggactaaaaacat 26724115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38948651 - 38948537
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||| |||||| | |||| ||||| ||| ||| | |||||| ||||||||||||| |||||||||||||||  ||||||| ||||| ||||    
T  38948651 tgtaaaaagtttttaaaatatgaactaatcttataaactactaaattatgaaggactaaaattatcattaaaattttatatagactaaatttgaaaactt 38948552  T
Q  101 gtgattttatagaga 115  Q
    |||||||| ||||||    
T  38948551 gtgattttgtagaga 38948537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 38607416 - 38607333
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||||||| |||||||||| | ||| ||| |||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  38607416 gttttcaaaataaggactattctaaaaaactacaatattatgaaggactaaaattacaattaaaattttatagaaactaaactt 38607333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 14820457 - 14820579
Alignment:
Q  3 taaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgt 102  Q
    ||||| ||||| |||||| ||| |||| ||||||| |||  |||||| ||||  ||||||||||| ||||||||| || |||||||||||||| |||| |    
T  14820457 taaaaagtttttaaaatatggattatttttacaaactacattattatagagggttaaaattaccactaaaattttgtaaggactaaacttgaaaacttat 14820556  T
Q  103 gattttatagagacttaaaacat 125  Q
    ||||||||||  ||| |||||||    
T  14820557 gattttataggaactaaaaacat 14820579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 5459219 - 5459271
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  5459219 atattatgaaggactaaatttaccattaaaattttatagggactaaacttgaa 5459271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 21114671 - 21114573
Alignment:
Q  27 attcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    ||||||||||| ||| ||||||||| |||||||||||| |||||||||||| |||  ||||||||| ||   || |||||||||||| ||| |||||||    
T  21114671 attcttacaaactacaatattatggtggactaaaattatcattaaaattttctagaaactaaacttaaaagtttctgattttatagatactaaaaacat 21114573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19343680 - 19343556
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||| |||||| | |||||| ||||||| ||| ||||| |  ||||||||||||| || ||||||||||||| |||||||||| || |||     
T  19343680 tgtaaaaagtttttaaaatatgaactatttttacaaactacaatattttttaggactaaaattatcactaaaattttatagagactaaacttaaaaactc 19343581  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     ||||||| |||  ||| |||||||    
T  19343580 atgattttgtaggtactaaaaacat 19343556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 36235880 - 36235788
Alignment:
Q  3 taaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    ||||| ||||| |||||  ||||| |||||||||| ||  |||||||||||| ||||||||||| ||||||||||||||| | |||| |||||    
T  36235880 taaaaagtttttaaaatggggactgttcttacaaactaaaatattatggagggctaaaattacccttaaaattttataggaattaaatttgaa 36235788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16089813 - 16089722
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||| ||||| |||| |  ||||||||||||||| ||  ||||| |  |||||||||||||| ||||||||||||| ||||||||||||    
T  16089813 tgtaaaaagttttaaaaacagagactattcttacaaactataatattttttaggactaaaattacaattaaaattttattgggactaaactt 16089722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 2160427 - 2160372
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||| ||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  2160427 aggattaaaattaccattaaaattttatatcgactaaacttaaaaacttgtgattt 2160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 26188823 - 26188889
Alignment:
Q  26 tattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttg 93  Q
    |||||||||||| ||| |||| ||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  26188823 tattcttacaaactacaatatgatggatgactaaaattactattaaaa-tttataggaactaaacttg 26188889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 3137200 - 3137151
Alignment:
Q  58 aaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||||||||||||||||||||||  |||||||||| || |||||||||||    
T  3137200 aaaattaccattaaaattttatattgactaaacttaaaaacttgtgattt 3137151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 39125870 - 39125940
Alignment:
Q  22 ggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||||||  ||| ||  |||||||| |||||||||||||| ||||||| || ||||||| |||||||    
T  39125870 ggactattcttgaaaaatataatattatgaaggactaaaattacaattaaaacttcatagggattaaactt 39125940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 2299335 - 2299298
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttata 80  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  2299335 atattgtggaagactaaaattaccattaaaattttata 2299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 16964 - 17087
Alignment:
Q  2 gtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttg 101  Q
    |||||| |||||||||||| |||||||||||||||| | | ||||| || ||||||||||||||||||||||||||||||||| ||||| |||| ||| |    
T  16964 gtaaaacgttttcaaaatagggactattcttacaaattgctatattttgtaggactaaaattaccattaaaattttatagggattaaacctgaaaactcg 17063  T
Q  102 tgattttatagagacttaaaacat 125  Q
    ||||||||||| |||| |||||||    
T  17064 tgattttatagggactaaaaacat 17087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 6197936 - 6197815
Alignment:
Q  3 taaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgt 102  Q
    ||||| ||||||||||||  ||||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||    
T  6197936 taaaaagttttcaaaatagagactattcttacaaactactaaattatggaggactaaatttaccattaaaattttatatggactaaacttgaa-aattgt 6197838  T
Q  103 gattttatagagacttaaaacat 125  Q
    |||||||||| |||| |||||||    
T  6197837 gattttatagggactaaaaacat 6197815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 3807189 - 3807073
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||||| |||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||| |||||||| | || |||| |||||||    
T  3807189 gttttcaaaatagggactattcttacaaactactaaattatggaggacgaaaattaccattaaaattttatagagactaaacataaaaacttatgatttt 3807090  T
Q  109 atagagacttaaaacat 125  Q
    |||| |||| |||||||    
T  3807089 atagggactaaaaacat 3807073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 24672390 - 24672274
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    ||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| |||    
T  24672390 gtttttaaaatagagactattattacaaattacaatattatggaggactaaaattaccattaaaattttatagggactaaacttgaaaaatcgtgaattt 24672291  T
Q  109 atagagacttaaaacat 125  Q
     |||||| | |||||||    
T  24672290 gtagagattaaaaacat 24672274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 4405818 - 4405938
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtg 103  Q
    |||| |||||| |||||| ||||||||||||||||||  |||||||||||||  |||||||||||||| |||||||||||||||||||| || |||| ||    
T  4405818 aaaaagttttccaaatacagactattcttacaaagtagaatattatggaggataaaaattaccattaatattttatagggactaaacttaaaaacttatg 4405917  T
Q  104 attttatagagacttaaaacat 125  Q
    ||||| ||| |||| |||||||    
T  4405918 attttgtag-gactaaaaacat 4405938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 10311755 - 10311642
Alignment:
Q  12 ttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttata 111  Q
    ||||||||| |||| ||||||||||| ||| ||||| | || ||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||||    
T  10311755 ttcaaaataaggaccattcttacaaattacaatattgttgatgactaaaattaccattaaaattttataggaactaaatttgaaaactcgtgattttata 10311656  T
Q  112 gagacttaaaacat 125  Q
      ||||||||||||    
T  10311655 aggacttaaaacat 10311642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 10516624 - 10516733
Alignment:
Q  16 aaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagaga 115  Q
    ||||| |||||||||||||||| ||| |||||||||||| ||||||||| ||||| |||||||||||||||||| || || |||| ||||||| ||| ||    
T  10516624 aaatagggactattcttacaaactacaatattatggagggctaaaattatcattacaattttatagggactaaatttaaaaacttatgattttgtaggga 10516723  T
Q  116 cttaaaacat 125  Q
    || |||||||    
T  10516724 ctaaaaacat 10516733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 4409526 - 4409617
Alignment:
Q  33 acaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    ||||||||  ||||||||||||||||||||||||||| | |||||||||||| ||||||| || |||||||||||| ||| |||| |||||||    
T  4409526 acaaagtagaatattatggaggactaaaattaccattgatattttatagggattaaacttaaaaacttgtgattttgtag-gactaaaaacat 4409617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 30465206 - 30465318
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttta 109  Q
    |||| |||||| |||||||||||||||| | | ||||||||||  ||||||||||||||||||||||||||||  ||||| ||||| |||  | ||||||    
T  30465206 tttttaaaatagggactattcttacaaacttcaatattatggaaaactaaaattaccattaaaattttataggatctaaagttgaaaactcttaatttta 30465305  T
Q  110 tagagacttaaaa 122  Q
    ||| |||| ||||    
T  30465306 tagggactaaaaa 30465318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 25042896 - 25042997
Alignment:
Q  23 gactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaa 122  Q
    ||||||||||||||| ||| |||| |  |||||||||||||||||||||||||||||| |||||||| ||||| |||  ||||||| ||| |||| ||||    
T  25042896 gactattcttacaaactacaatatcacagaggactaaaattaccattaaaattttata-ggactaaatttgaaaactcatgattttgtagggactaaaaa 25042994  T
Q  123 cat 125  Q
    |||    
T  25042995 cat 25042997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3336026 - 3336117
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||| ||||||| ||||   ||||||| |||||| ||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||    
T  3336026 tgtaaaaagttttcagaataacaactattcatacaaattacaatattttagaggactaaaattaccactaaaattttatagggtctaaactt 3336117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 27775657 - 27775548
Alignment:
Q  133 aaactaaaattagccaaccaatcaacacatttgtttctctcacgccatgtgtgattaaaagcaatattgtcatgtaaactaacaagatcctgaatacaac 232  Q
    ||||||||||||| ||||||||||||||||||||||||| | || |||||||| |||  | ||||||| ||||||||  |  | |||||||||||||  |    
T  27775657 aaactaaaattagtcaaccaatcaacacatttgtttctcgcgcggcatgtgtgcttagtaacaatattttcatgtaagatggcgagatcctgaatacggc 27775558  T
Q  233 agaccaagat 242  Q
     |||||||||    
T  27775557 ggaccaagat 27775548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17957158 - 17957034
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||| |  ||||||||||||||| ||  ||||| |  |||||||||||||| ||||||||||||| || ||||||||| || |||     
T  17957158 tgtaaaaagttttcaaaacagagactattcttacaaactataatattttttaggactaaaattacaattaaaattttattggaactaaacttaaaaactc 17957059  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     | ||| ||||| |||| |||||||    
T  17957058 ataattatatagggactaaaaacat 17957034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 12611900 - 12611835
Alignment:
Q  24 actattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaa 89  Q
    |||||||||| ||| ||  || ||||||||||||||||||||||||||||||||| ||||| ||||    
T  12611900 actattcttataaactataatgttatggaggactaaaattaccattaaaattttagagggattaaa 12611835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 17141877 - 17141932
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||||||||||||||||||||||||||||  |||||||||| || |||| ||||||    
T  17141877 aggactaaaattaccattaaaattttatatcgactaaacttaaaaacttatgattt 17141932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 32003124 - 32003190
Alignment:
Q  26 tattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||| || ||| ||| ||||||||||| || ||||||||||||||||||| ||| |||||||||||    
T  32003124 tattcatataaactacaatattatggagcaccaaaattaccattaaaatttaataaggactaaactt 32003190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 10313353 - 10313317
Alignment:
Q  58 aaaattaccattaaaattttatagggactaaacttga 94  Q
    |||||||| ||||||||||||||||||||||||||||    
T  10313353 aaaattactattaaaattttatagggactaaacttga 10313317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 14896881 - 14896838
Alignment:
Q  49 tggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||    
T  14896881 tggagaactaaaattatcattaaaattttataggaactaaactt 14896838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 27775567 - 27775521
Alignment:
Q  243 tgaatacggcagaccaagatagaggcgtgtctattaagcttacaactcc 291  Q
    |||||||||| ||||||||||| ||  ||||||||||||||||||||||    
T  27775567 tgaatacggcggaccaagatagggg--tgtctattaagcttacaactcc 27775521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 17158490 - 17158586
Alignment:
Q  29 tcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    ||||||||| ||  ||||| || | |||||||||||| |||||||| || |||||||| ||| |||| |||  | ||||||||| |||| |||||||    
T  17158490 tcttacaaactataatattttgaaagactaaaattactattaaaatgttgtagggactcaacgtgaaaactcataattttatagggactaaaaacat 17158586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 34471339 - 34471222
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatag 112  Q
    |||||||| || ||||| ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||    
T  34471339 tcaaaataaggtctattattacaaactacaatattttggaggactaaaattaccattaaaattttatagggactaaacttaaaagcttgtgattttgtag 34471240  T
Q  113 agacttaaaacatttaac 130  Q
     |||| ||||||||||||    
T  34471239 ggactaaaaacatttaac 34471222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 27567709 - 27567827
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtg 103  Q
    |||| |||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| || |||  ||    
T  27567709 aaaaagttttcaaaataaggactattcttacaaactacaatattatgtaggactaaaattaccattaaaattttatagggaataaactttaaaactcatg 27567808  T
Q  104 attttatagagacttaaaa 122  Q
    ||||| ||| |||| ||||    
T  27567809 attttgtagggactaaaaa 27567827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 25067772 - 25067656
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||||| |||||||| ||||||| ||  ||||||||||||| |||||||||||||||||||||||||  || |||||| || | || |||||||    
T  25067772 gttttcaaaataaggactatttttacaaactataatattatggaggattaaaattaccattaaaattttatagaaaccaaacttaaaaatttatgatttt 25067673  T
Q  109 atagagacttaaaacat 125  Q
     |||||| | |||||||    
T  25067672 gtagagattaaaaacat 25067656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 11297878 - 11297799
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaa 88  Q
    |||||||||||| |||||||| ||||||| ||  ||||| |||||||||||||||||||||||||||| ||||| |||||    
T  11297878 gttttcaaaatagggactatttttacaaactaaaatattttggaggactaaaattaccattaaaatttcataggaactaa 11297799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 30851685 - 30851787
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttta 109  Q
    |||| |||||| |||||||||||||||| | | ||||||||||  ||||||||||||||||||||||||||||  ||||| ||||| |||  | ||||||    
T  30851685 tttttaaaatagggactattcttacaaacttcaatattatggaaaactaaaattaccattaaaattttataggatctaaagttgaaaactcttaatttta 30851784  T
Q  110 tag 112  Q
    |||    
T  30851785 tag 30851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13009405 - 13009480
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattt 76  Q
    ||||||| ||| | ||||||  ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  13009405 tgtaaaaagttattaaaataacgactattcttacaaactacaatattatagaggactaaaattaccattaaaattt 13009480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 40751680 - 40751770
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    |||| |||||| ||| |||||||||||| ||  |||||||| ||||| | ||||| ||||||||||||||||| |||||||||||| ||||    
T  40751680 tttttaaaatagggattattcttacaaactaaaatattatgaaggacaataattagcattaaaattttataggaactaaacttgaaaactt 40751770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 28098655 - 28098581
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttata 80  Q
    |||| |||||||||||| ||| ||||  |||||| |||  |||||| ||||||||||||||||||||||||||||||    
T  28098655 aaaaagttttcaaaatatggattatttctacaaactac--tattatcgaggactaaaattaccattaaaattttata 28098581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20132182 - 20132058
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||| |  ||||||||||||||| ||  ||||| |  |||||||||||||| ||||||||||||| |  ||||||||| || |||     
T  20132182 tgtaaaaagttttcaaaacagagactattcttacaaattataatattttttaggactaaaattacaattaaaattttattgaaactaaacttaaaaactc 20132083  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     | ||| ||||| |||| |||||||    
T  20132082 ataattatatagggactaaaaacat 20132058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 28555357 - 28555285
Alignment:
Q  53 ggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    |||||||||||||||||||||||||||| ||||||||||| || | |   |||||| |||||||| |||||||    
T  28555357 ggactaaaattaccattaaaattttatatggactaaacttaaaaaatcacgattttgtagagactaaaaacat 28555285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12925341 - 12925250
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||||| ||||| |||||| ||| |||| ||| ||| ||  || || ||||| |||||||||| ||||||||||||||||| |||||||||    
T  12925341 tgtaaaaagttttaaaaataaggattattattaaaaattataattttttggagaactaaaattatcattaaaattttataggaactaaactt 12925250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 2316191 - 2316118
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaatttta 78  Q
    |||| ||||| |||||| | |||||||||| ||| | | |||||||||||||||||||||| |||||||||||||    
T  2316191 aaaatgtttttaaaataggaactattctta-aaattgcaatattatggaggactaaaattatcattaaaatttta 2316118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 21367256 - 21367210
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaa 89  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||    
T  21367256 atattatggaggattaaaattaccattaaaattttataaagactaaa 21367210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 43617193 - 43617069
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||| ||| || |||||| |||| ||||  || |||  ||| || ||| ||||||||||||||||||||||  |||| ||||| || ||||    
T  43617193 tgtaaaaagtttttaaagtatggactactcttgcaaacaaccataacatgaagaactgaaattaccattaaaattttataaagactgaacttcaaaactt 43617094  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     | |||||||| || ||||||||||    
T  43617093 ataattttataaaggcttaaaacat 43617069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 41232915 - 41232860
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    ||||||||||||||||||||||||| |||  |||||||||| || |||| ||||||    
T  41232915 aggactaaaattaccattaaaatttaatatcgactaaacttaaaaacttatgattt 41232860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 8894549 - 8894590
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttataggga 84  Q
    |||||| ||||||||||||||| ||||||||||| |||||||    
T  8894549 atattacggaggactaaaattatcattaaaatttaataggga 8894590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 39596814 - 39596863
Alignment:
Q  31 ttacaaagtacgatattatggaggactaaaattaccattaaaattttata 80  Q
    ||||||| ||| ||||| |||||||||||||||| |||||||| ||||||    
T  39596814 ttacaaactacaatattttggaggactaaaattatcattaaaaatttata 39596863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 28565089 - 28565169
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaa 89  Q
    ||||||||||||  ||||||| ||| ||| |||  ||||||  |||||||||||||  |||||||||||||| | ||||||    
T  28565089 gttttcaaaatagagactatttttataaactacattattataaaggactaaaattattattaaaattttataagaactaaa 28565169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 40391017 - 40390894
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| ||||| ||||||  ||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||     
T  40391017 tgtaaaatgttttaaaaatagagactattcttacaaactacaatat-atggaggactaaaattatcattaaaattttataggaactaaacttgaaaactc 40390919  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     ||||||| ||| |||| |||||||    
T  40390918 atgattttgtagggactaaaaacat 40390894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 33610069 - 33609950
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttg-t 102  Q
    |||| |||||||||||| |||||||||||| ||| ||| |||||||| |  | |||||||||||||||||||||||| | ||||||||| || ||||| |    
T  33610069 aaaaagttttcaaaataaggactattcttataaactacaatattatgaaaaattaaaattaccattaaaattttataagaactaaacttaaaaacttgat 33609970  T
Q  103 gattttatagagacttaaaa 122  Q
    |||||| || ||||| ||||    
T  33609969 gattttgtatagactaaaaa 33609950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15025906 - 15025785
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| |||||||| | ||||| ||  ||||| | ||||| |||||||||||||||||||||||| | ||||||||| |  |||     
T  15025906 tgtaaaaagttttcaaaatagggactattatcacaaactataatattttagaggattaaaattaccattaaaattttataagaactaaacttaataactc 15025807  T
Q  101 gtgattttatagagacttaaaa 122  Q
    |||||||| ||| |||| ||||    
T  15025806 gtgattttgtagggactaaaaa 15025785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31050015 - 31050122
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||||||||||||||||  ||||||  ||||||  ||| ||||||| ||| |||||| |||| |||| |||||||||||| |||||||| || || |    
T  31050015 tgtaaaaggttttcaaaataatgactatctttacaagctacaatattatcgagaactaaatttacaattataattttataggggctaaacttaaaaacat 31050114  T
Q  101 gtgatttt 108  Q
    ||||||||    
T  31050115 gtgatttt 31050122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 38377883 - 38377812
Alignment:
Q  54 gactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||||| ||  |||| |||||||    
T  38377883 gactaaaattaccattaaaattttatagggactaaacttaaaaatttgtgattttgtaaggactaaaaacat 38377812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 22593332 - 22593430
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    ||||| |||| | |||||||| ||||||| || |||||| | || ||||||||| ||||||||||||| ||||  |||||||||||| |||||||||||    
T  22593332 gtttttaaaaaagggactatttttacaaactatgatattgtagaagactaaaatcaccattaaaatttaatagaaactaaacttgaaaacttgtgattt 22593430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 47472290 - 47472233
Alignment:
Q  24 actattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatag 81  Q
    |||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  47472290 actattcttataaattacaatattatgaaggactaaaattaccattaaaattttatag 47472233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 10574057 - 10573973
Alignment:
Q  24 actattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||| ||||||| ||| ||||||||||||| ||||||| |||||| | ||||||||  |||||| ||||| ||||||||||||    
T  10574057 actatttttacaaactacaatattatggaggattaaaattgccattatatttttatagaaactaaatttgaaaacttgtgatttt 10573973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 15882219 - 15882295
Alignment:
Q  49 tggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| || |||  ||||||| ||| |||| |||||||    
T  15882219 tggaggactaaaattaccattaaaatttcatagggactaagcttaaaaactcatgattttgtagggactaaaaacat 15882295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 33894467 - 33894532
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||| ||||||||||| |||||||||||||||  || |||||||||| | ||||||||||    
T  33894467 atattatggaagactaaaattaacattaaaattttatacagattaaacttgaaaatttgtgatttt 33894532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 6449713 - 6449817
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtg 103  Q
    |||| ||||| |||||| |||||||| ||||||| |||  ||||||  |  |||||||||| |||||||||||||| || | |||||||||| ||| |||    
T  6449713 aaaaagtttttaaaatagggactatttttacaaactacattattataaaaaactaaaattatcattaaaattttatgggcattaaacttgaaaactcgtg 6449812  T
Q  104 atttt 108  Q
    |||||    
T  6449813 atttt 6449817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 6156152 - 6156075
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatag 81  Q
    |||| ||| |||||||| | |||||| ||| ||| ||| |||||||||| ||||||||  ||||||||||||||||||    
T  6156152 aaaaagttatcaaaatatgaactatttttataaactacaatattatggaagactaaaaaaaccattaaaattttatag 6156075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 29291309 - 29291241
Alignment:
Q  133 aaactaaaattagccaaccaatcaacacatttgtttctctcacgccatgtgtgattaaaagcaatattg 201  Q
    |||||||||||| |||||||||||| |||| |||||| ||||| ||||||| | |||| | ||||||||    
T  29291309 aaactaaaattaaccaaccaatcaatacatatgtttccctcacaccatgtgcgtttaacaacaatattg 29291241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 14806174 - 14806131
Alignment:
Q  49 tggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||    
T  14806174 tggagaactaaaattatcattaaaattttataggaactaaactt 14806131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 30802024 - 30801956
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatag 112  Q
    |||||||| | ||||||||| | ||||||||||||||| ||| ||||||| || |||||| |||||||||    
T  30802024 atattatgaatgactaaaataatcattaaaattttata-ggattaaacttaaaaacttgtaattttatag 30801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 7117052 - 7117000
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    ||||| ||||||||||| |||| ||||||||| |||| || ||||||||||||    
T  7117052 atattttggaggactaatattaacattaaaatgttattggaactaaacttgaa 7117000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 20336900 - 20336785
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttta 109  Q
    ||||||||||| |||||||  ||||||| | | |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||  |||||||     
T  20336900 ttttcaaaatagggactataattacaaaattcaatattatggaggactaaaattaccattaaaattttataaggactaaagttgaaaactcttgattttg 20336801  T
Q  110 tagagacttaaaacat 125  Q
    ||| |||| |||||||    
T  20336800 tagggactaaaaacat 20336785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 39340885 - 39340775
Alignment:
Q  15 aaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagag 114  Q
    |||||| |||||||| ||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||||| || ||| |||||||| ||| |    
T  39340885 aaaatagggactatttttacaaactacaatattttggatgactaaaattaccattaaaactttatagggactaaacttaaaaactagtgattttgtaggg 39340786  T
Q  115 acttaaaacat 125  Q
    ||| |||||||    
T  39340785 actcaaaacat 39340775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20315016 - 20314900
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    |||||||  |||||||||||  ||||||| ||||||| | | ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| |||     
T  20315016 tgtaaaaaattttcaaaatagagactattattacaaaattcaatattatggaggactaaaattgccattaaaattttataaggactaaagttgaaaactc 20314917  T
Q  101 gtgattttatagagact 117  Q
     ||||||| ||| ||||    
T  20314916 ttgattttgtagggact 20314900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34359459 - 34359335
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||| | |||| ||| ||||||| ||  ||||| ||||||| |||||||||||||||||||||||| ||||||||||| || |||     
T  34359459 tgtaaaaagttttcaaaacagggaccatttttacaaactataatattttggaggaataaaattaccattaaaattttatatggactaaacttaaaaactc 34359360  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     ||||||| ||  |||| |||||||    
T  34359359 atgattttgtaaggactaaaaacat 34359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28769546 - 28769625
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttata 80  Q
    ||||||| ||||| ||||||  ||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||    
T  28769546 tgtaaaaagtttttaaaataaagactattcttacaaactacaatattatggaggacaaaaatcaccattaaaattttata 28769625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 13899550 - 13899492
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttg 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  13899550 atattatggaggactaaaattaccattaaaattttataggaactaaacttcaagacttg 13899492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 16876503 - 16876437
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattt 76  Q
    |||| |||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  16876503 tttttaaaatagggactattcttacaaactacaatattatggaggactaaaattacaattaaaattt 16876437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 22853421 - 22853504
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    |||| |||||| |||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  22853421 tttttaaaataaggactatttttacaaattaaaatattatggaggactaaaattaccattaaaattt--tagagactaaacttgaa 22853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 52423086 - 52423004
Alignment:
Q  51 gaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacatttaaccca 133  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||| ||| |||| || | ||||||||||    
T  52423086 gaggactaaaattaccattgaaactttatagggactaaacttgaaaactcgtgattttgtagggactaaacatatttaaccca 52423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 50334686 - 50334796
Alignment:
Q  12 ttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttata 111  Q
    ||||||||| | |||| | ||||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||| |||| |  || |||  ||||||||||    
T  50334686 ttcaaaataggaactaattttacaaactacaatattttggaagactaaaattatcattaaaattttatagggattaaagtaaaaaactcatgattttata 50334785  T
Q  112 gagacttaaaa 122  Q
    |||||| ||||    
T  50334786 gagactaaaaa 50334796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 44446892 - 44447016
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||| |  ||||||||||||||| ||  ||||| |  |||||||||||||| ||||||||||||| |||| ||||||| || |||     
T  44446892 tgtaaaaagttttcaaaacagagactattcttacaaactataatattttttaggactaaaattacaattaaaattttattgggattaaacttaaaaactc 44446991  T
Q  101 gtgattttatagagacttaaaacat 125  Q
     | ||| ||||| |||| |||||||    
T  44446992 ataattatatagggactaaaaacat 44447016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 38673349 - 38673412
Alignment:
Q  26 tattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaa 89  Q
    |||||||||||| ||| |||||||||  || |||||||| ||||||||||||||||||||||||    
T  38673349 tattcttacaaattacaatattatggttgattaaaattatcattaaaattttatagggactaaa 38673412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 17268937 - 17268847
Alignment:
Q  23 gactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttataga 113  Q
    ||||||| ||||||| ||| ||| ||| || ||||||||||| |||||||||| |||| |||||| |||| || ||| || ||||||||||    
T  17268937 gactatttttacaaactacaataatatagaagactaaaattatcattaaaattgtatatggactatacttaaacactcgtaattttataga 17268847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 45743858 - 45743765
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttga 94  Q
    ||||||| ||||| |||||| |||| ||||||||||| |||  || |||  ||||||||| |||| |||||||||||||| | || ||||||||    
T  45743858 tgtaaaaagtttttaaaatagggaccattcttacaaactacactactataaaggactaaagttactattaaaattttataagaaccaaacttga 45743765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 16607660 - 16607703
Alignment:
Q  49 tggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||    
T  16607660 tggagaactaaaattatcattaaaattttataggaactaaactt 16607703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 9766048 - 9766098
Alignment:
Q  27 attcttacaaagtacgatattatggaggactaaaattaccattaaaatttt 77  Q
    ||||||||||| ||| ||||| | |||||||||||||| ||||||||||||    
T  9766048 attcttacaaactacaatattgtagaggactaaaattatcattaaaatttt 9766098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 16876141 - 16876101
Alignment:
Q  68 ttaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||||||||||||||||||||| | | ||||||||    
T  16876141 ttaaaattttatagggactaaacttgaaaaatcgtgatttt 16876101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 18085360 - 18085424
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||||||| | ||||||||| | ||||||||||||||||||| |||| || || |||||| ||||    
T  18085360 atattatgaatgactaaaataatcattaaaattttatagggattaaatttaaaaacttgtaattt 18085424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 28997905 - 28997853
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    ||||||||||| ||||||| ||| |||||| |||||||||| ||||| |||||    
T  28997905 atattatggagaactaaaactacaattaaagttttatagggtctaaatttgaa 28997853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 50358479 - 50358539
Alignment:
Q  55 actaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagaga 115  Q
    |||||||||| |||||||||||||||   | |||||| ||| |||||||||||| ||||||    
T  50358479 actaaaattaacattaaaattttatataaattaaactcgaagacttgtgattttgtagaga 50358539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20986056 - 20985949
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    ||||||| |||||||||||| ||||||||||| |||| ||| ||||| | || |||||||||||||||||||||||||||||||||||| || || |||     
T  20986056 tgtaaaaagttttcaaaatagggactattcttgcaaactacaatattttagaagactaaaattaccattaaaattttatagggactaaatttaaaaactc 20985957  T
Q  101 gtgatttt 108  Q
    ||||||||    
T  20985956 gtgatttt 20985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 33753010 - 33753123
Alignment:
Q  11 tttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttat 110  Q
    ||||||||||  ||| ||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||| || |||||||||||| |    
T  33753010 tttcaaaatagtgaccattcttacaaactacaatattatggagggctaaaatcaccattaaaattttatacggactaaactttaaaacttgtgattttgt 33753109  T
Q  111 agagacttaaaacat 125  Q
    || |||| |||||||    
T  33753110 ag-gactaaaaacat 33753123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 13392935 - 13392847
Alignment:
Q  4 aaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||| ||||| |||||| |||||||| ||||||| ||| ||||| |||| ||||||||||| |||||||| ||||||||||||||||||    
T  13392935 aaaaagtttttaaaatagggactatttttacaaactacaatattttggatgactaaaattaacattaaaactttatagggactaaactt 13392847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 1445070 - 1444985
Alignment:
Q  22 ggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||||| ||| ||| ||||||||||||| |||||||| | | |||||||||||| ||||||||||||| ||| ||||||||    
T  1445070 ggactattcttaaaaactacaatattatggaggattaaaatta-cttaaaaattttatagagactaaacttgaaaactcgtgatttt 1444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 3891548 - 3891483
Alignment:
Q  27 attcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||| |||| ||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  3891548 attcttgcaaattacaatattacggaggactaaaactaccaataaaattttatagggactaaactt 3891483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 37471014 - 37471066
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  37471014 atattatggaggactaaaagcaccattaaatttttatagggactaaacttgaa 37471066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 50919373 - 50919411
Alignment:
Q  54 gactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50919373 gactaaaattaccattaaaattttatagggactaaactt 50919411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 29102956 - 29102871
Alignment:
Q  10 ttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    |||| |||||| |||||||| ||  ||  ||| ||||| |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  29102956 tttttaaaatagggactatttttgaaagctacaatattttggaggactaaaattatcatttaaattgtatagggactaaacttgaa 29102871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 14941096 - 14941151
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||| ||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  14941096 aggattaaaattaccattaaaattttatatcgactaaacttaaaaacttgtgattt 14941151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 14951103 - 14951158
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||| ||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  14951103 aggattaaaattaccattaaaattttatatcgactaaacttaaaaacttgtgattt 14951158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 14955344 - 14955399
Alignment:
Q  52 aggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattt 107  Q
    |||| ||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  14955344 aggattaaaattaccattaaaattttatatcgactaaacttaaaaacttgtgattt 14955399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 16545458 - 16545540
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||||||||| |||| ||| ||| ||| ||| ||||| ||||||| |||| ||| ||||||||||||||||||| |||||||    
T  16545458 gttttcaaaatagggaccattttta-aaactacaatattttggaggagtaaatttatcattaaaattttatagggattaaactt 16545540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 29307657 - 29307743
Alignment:
Q  31 ttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagact 117  Q
    ||||||| |||  |||| || |||||||||||||| |||||||| ||||||||||||||||| || |||  ||||||| ||| ||||    
T  29307657 ttacaaactacagtattttgaaggactaaaattacaattaaaatcttatagggactaaacttaaaaactcatgattttgtagggact 29307743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 15800895 - 15800836
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgt 102  Q
    |||||||| | ||||||||| | ||||||||||||||||||| ||||||| || ||||||    
T  15800895 atattatgaatgactaaaataatcattaaaattttatagggattaaacttaaaaacttgt 15800836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 50773681 - 50773734
Alignment:
Q  43 atattatggaggactaaaattaccattaaaattttatagggactaaacttgaatactt 100  Q
    |||||||| |||||||||||||| |||||||    |||||||||||||||||| ||||    
T  50773681 atattatgaaggactaaaattacaattaaaa----atagggactaaacttgaagactt 50773734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 152218 - 152304
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 95  Q
    ||||| |||||| |||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  152218 gttttaaaaatagggactattcttacaatctacaatattatgaaggactaaaattaccattaaaattttataaagactaaacttgaa 152304  T

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Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 48466 - 48540
Alignment:
Q  1 tgtaaaaggttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaatt 75  Q
    ||||||| |||||||||| | ||||| |||||| ||| ||| || ||||||||||||||||||||||||||||||    
T  48466 tgtaaaaagttttcaaaagagggactgttcttataaactacaattttatggaggactaaaattaccattaaaatt 48540  T

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Target: scaffold0720 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 5513 - 5629
Alignment:
Q  9 gttttcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgatttt 108  Q
    |||||||||||| |||||| | ||||||| ||  ||||| ||||||||||||  |||||||||||||| |||||||| || ||| || |||  |||||||    
T  5513 gttttcaaaatagggactacttttacaaactaaaatattttggaggactaaatataccattaaaatttcatagggaccaagcttaaaaactcatgatttt 5612  T
Q  109 atagagacttaaaacat 125  Q
     ||| |||| |||||||    
T  5613 gtagggactaaaaacat 5629  T

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Target: scaffold0478 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 8716 - 8604
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatag 112  Q
    |||||||| |||||||| | ||||| |   ||||| |||||||||||||||||||||||||||| || |||||||| ||| || |||  ||||||| |||    
T  8716 tcaaaatagggactattttaacaaacttaaatattttggaggactaaaattaccattaaaatttcattgggactaagcttaaaaactcatgattttttag 8617  T
Q  113 agacttaaaacat 125  Q
     |||| |||||||    
T  8616 ggactaaaaacat 8604  T

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Target: scaffold0478; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 3300 - 3226
Alignment:
Q  51 gaggactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttatagagacttaaaacat 125  Q
    |||||||||||||||||||||||||| ||||||| ||| ||| || |||  ||||||| ||| |||| |||||||    
T  3300 gaggactaaaattaccattaaaatttcatagggattaagcttaaaaactcatgattttgtagggactaaaaacat 3226  T

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Target: scaffold1911 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1911
Description:

Target: scaffold1911; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 97 - 22
Alignment:
Q  13 tcaaaatacggactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaa 88  Q
    |||||||| |||||||| | ||||| |   ||||| |||||||||||||||||||||||||||| |||||||||||    
T  97 tcaaaatagggactattttaacaaacttaaatattttggaggactaaaattaccattaaaatttcatagggactaa 22  T

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Target: scaffold0264 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 19789 - 19855
Alignment:
Q  24 actattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaac 90  Q
    |||||| |||| || ||| ||||| | || ||||||||||||| |||||||||||||||||||||||    
T  19789 actatttttactaactacaatattttcgacgactaaaattaccgttaaaattttatagggactaaac 19855  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 33553 - 33596
Alignment:
Q  49 tggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||    
T  33553 tggagaactaaaattatcattaaaattttataggaactaaactt 33596  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 253807 - 253876
Alignment:
Q  23 gactattcttacaaagtacgatattatggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    |||||| |||||||| ||  ||||| |  |||||||||||||| |||||||||||||| | |||||||||    
T  253807 gactatccttacaaactataatattttaaaggactaaaattactattaaaattttatatgaactaaactt 253876  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 363160 - 363203
Alignment:
Q  49 tggaggactaaaattaccattaaaattttatagggactaaactt 92  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||    
T  363160 tggagaactaaaattatcattaaaattttataggaactaaactt 363203  T

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Target: scaffold0536 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 3931 - 3875
Alignment:
Q  54 gactaaaattaccattaaaattttatagggactaaacttgaatacttgtgattttat 110  Q
    ||||||||||| |||||||| |||| || |||||||||| || |||||| |||||||    
T  3931 gactaaaattatcattaaaagtttagagagactaaacttaaaaacttgtaattttat 3875  T

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