View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15036_high_23 (Length: 319)
Name: NF15036_high_23
Description: NF15036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15036_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 47806236 - 47805928
Alignment:
| Q |
1 |
ttcaagttcagcaagagcataaaacaagtcataaatcaattatggatttaacagtatctctaagaaaaaatttggtaaatattctacaatccaagtaaat |
100 |
Q |
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| T |
47806236 |
ttcaagttcagcaagagcataaaacaagtcataaaacaattatggatttaacattatctctaagaaaaaatttggtaaatattctacaatccaagtaaat |
47806137 |
T |
|
| Q |
101 |
acactaagccctaaatcccatccaagtcatggtccaaattttgttctacaatctataccatcttcaattaaataatacacttacctcatccgaatcatgg |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
47806136 |
acactaaaccctaaatcccatccaagtcatggtccaaattttgttctacaatctataccatcttcaattaaataatacacttacctcatccgagtcatgg |
47806037 |
T |
|
| Q |
201 |
tcctggctatctgtttccccactttcttcatcagaatcattatgcattacctccataagctcgggggaaactgatggtacacgccttaacaactgtttta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47806036 |
tcctggctatctgtttccccactttcttcatcagaatcattatgcattacctccataagctcgggggaaactgatggtacacgccttaacaactgtttta |
47805937 |
T |
|
| Q |
301 |
gtttctgtg |
309 |
Q |
| |
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||||||||| |
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| T |
47805936 |
gtttctgtg |
47805928 |
T |
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