View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15036_high_27 (Length: 311)

Name: NF15036_high_27
Description: NF15036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15036_high_27
NF15036_high_27
[»] chr2 (36 HSPs)
chr2 (212-298)||(7899898-7899984)
chr2 (212-298)||(22848190-22848276)
chr2 (212-296)||(36449777-36449861)
chr2 (212-298)||(38840509-38840595)
chr2 (216-296)||(36450939-36451018)
chr2 (212-291)||(18904366-18904445)
chr2 (212-298)||(23869551-23869636)
chr2 (212-298)||(38839241-38839327)
chr2 (213-300)||(18299373-18299460)
chr2 (212-295)||(18906006-18906089)
chr2 (212-290)||(18868923-18869001)
chr2 (212-295)||(22587973-22588055)
chr2 (216-298)||(7898694-7898776)
chr2 (212-298)||(11258827-11258913)
chr2 (212-298)||(11938805-11938890)
chr2 (216-290)||(13567975-13568049)
chr2 (212-298)||(41879228-41879314)
chr2 (213-298)||(1034485-1034570)
chr2 (214-298)||(13030293-13030374)
chr2 (213-295)||(41878092-41878176)
chr2 (214-295)||(18300743-18300822)
chr2 (212-296)||(13570575-13570659)
chr2 (212-298)||(18797245-18797332)
chr2 (213-295)||(24476863-24476943)
chr2 (237-296)||(32739647-32739706)
chr2 (212-290)||(802615-802692)
chr2 (212-290)||(16446153-16446231)
chr2 (237-299)||(24475248-24475310)
chr2 (237-298)||(22587525-22587585)
chr2 (212-270)||(21837299-21837355)
chr2 (212-298)||(11257621-11257706)
chr2 (237-295)||(28617946-28618004)
chr2 (11-63)||(10928182-10928234)
chr2 (214-288)||(1033212-1033284)
chr2 (241-290)||(810805-810854)
chr2 (216-296)||(8534586-8534665)
[»] chr1 (48 HSPs)
chr1 (212-298)||(11437215-11437301)
chr1 (212-298)||(24422799-24422885)
chr1 (212-298)||(11436041-11436127)
chr1 (212-298)||(52274967-52275053)
chr1 (213-298)||(51684366-51684451)
chr1 (10-73)||(15373868-15373931)
chr1 (216-298)||(24426091-24426173)
chr1 (212-298)||(35067018-35067104)
chr1 (213-298)||(39699783-39699867)
chr1 (213-298)||(45148581-45148665)
chr1 (212-291)||(23980489-23980568)
chr1 (216-295)||(37526896-37526975)
chr1 (212-290)||(14999284-14999361)
chr1 (213-286)||(39222501-39222575)
chr1 (212-298)||(51685781-51685867)
chr1 (213-298)||(36613920-36614005)
chr1 (212-293)||(39698562-39698643)
chr1 (213-298)||(41364829-41364913)
chr1 (216-296)||(45149989-45150068)
chr1 (212-288)||(52827346-52827422)
chr1 (212-290)||(11190384-11190462)
chr1 (212-298)||(12389997-12390083)
chr1 (216-290)||(39153140-39153214)
chr1 (212-298)||(44404441-44404527)
chr1 (212-290)||(45157233-45157310)
chr1 (212-295)||(35594216-35594298)
chr1 (212-290)||(7674527-7674603)
chr1 (212-290)||(33088641-33088719)
chr1 (212-298)||(36612852-36612937)
chr1 (216-290)||(39151934-39152008)
chr1 (216-290)||(43378737-43378810)
chr1 (216-298)||(50680335-50680416)
chr1 (213-291)||(50681627-50681705)
chr1 (216-298)||(52828086-52828168)
chr1 (212-295)||(43060025-43060108)
chr1 (212-286)||(14999983-15000057)
chr1 (212-289)||(16290092-16290170)
chr1 (216-294)||(43058789-43058866)
chr1 (250-289)||(44411991-44412030)
chr1 (13-47)||(2129470-2129504)
chr1 (22-72)||(2129521-2129571)
chr1 (212-298)||(7675475-7675560)
chr1 (216-298)||(7983053-7983134)
chr1 (216-282)||(52276195-52276261)
chr1 (212-295)||(35595210-35595295)
chr1 (237-289)||(33088091-33088143)
chr1 (212-259)||(39221357-39221405)
chr1 (212-260)||(41366184-41366232)
[»] chr5 (31 HSPs)
chr5 (212-300)||(19752911-19752998)
chr5 (212-298)||(25523068-25523154)
chr5 (213-295)||(22940641-22940723)
chr5 (212-300)||(19754144-19754233)
chr5 (212-298)||(18486918-18487004)
chr5 (212-298)||(40255688-40255774)
chr5 (216-296)||(20216781-20216861)
chr5 (212-298)||(16650871-16650957)
chr5 (212-298)||(28538675-28538761)
chr5 (212-295)||(33160305-33160388)
chr5 (212-298)||(5778852-5778938)
chr5 (213-295)||(20214196-20214277)
chr5 (212-298)||(25055411-25055497)
chr5 (212-298)||(36486504-36486590)
chr5 (216-290)||(24332916-24332990)
chr5 (213-290)||(1796054-1796131)
chr5 (213-298)||(25056397-25056482)
chr5 (212-298)||(5777900-5777984)
chr5 (212-291)||(18485137-18485216)
chr5 (212-298)||(25524143-25524230)
chr5 (212-295)||(33158097-33158180)
chr5 (212-290)||(18154493-18154570)
chr5 (216-298)||(28539836-28539917)
chr5 (212-288)||(5730440-5730517)
chr5 (216-289)||(2685749-2685820)
chr5 (213-298)||(5962588-5962671)
chr5 (212-298)||(7311589-7311675)
chr5 (216-298)||(42195137-42195217)
chr5 (237-300)||(2686415-2686478)
chr5 (215-298)||(36485302-36485385)
chr5 (237-287)||(34893689-34893739)
[»] chr4 (45 HSPs)
chr4 (212-298)||(1290214-1290300)
chr4 (212-298)||(52491623-52491709)
chr4 (212-296)||(17382992-17383075)
chr4 (212-296)||(17388229-17388312)
chr4 (212-300)||(49308042-49308128)
chr4 (216-295)||(8758856-8758935)
chr4 (212-298)||(1963195-1963281)
chr4 (213-298)||(10471404-10471489)
chr4 (216-295)||(12129626-12129705)
chr4 (212-298)||(25685838-25685924)
chr4 (216-298)||(8155741-8155822)
chr4 (215-298)||(19750591-19750673)
chr4 (215-298)||(19789133-19789215)
chr4 (212-298)||(31599788-31599874)
chr4 (213-295)||(31601004-31601086)
chr4 (216-298)||(35935549-35935631)
chr4 (212-300)||(3928872-3928960)
chr4 (213-296)||(1834119-1834202)
chr4 (212-291)||(8757674-8757752)
chr4 (212-295)||(26421641-26421723)
chr4 (212-298)||(1835118-1835204)
chr4 (212-298)||(10470545-10470631)
chr4 (212-298)||(48780247-48780333)
chr4 (212-298)||(48781062-48781147)
chr4 (212-288)||(13386013-13386090)
chr4 (213-298)||(25684934-25685019)
chr4 (216-295)||(35934347-35934424)
chr4 (216-296)||(55603549-55603628)
chr4 (213-291)||(1964464-1964542)
chr4 (212-298)||(5526142-5526227)
chr4 (216-289)||(55602379-55602451)
chr4 (212-298)||(13386548-13386635)
chr4 (212-298)||(5525359-5525444)
chr4 (1-71)||(8194012-8194081)
chr4 (213-298)||(10447006-10447092)
chr4 (212-298)||(21177996-21178081)
chr4 (216-289)||(1289100-1289173)
chr4 (213-300)||(33310103-33310187)
chr4 (212-300)||(3927665-3927753)
chr4 (212-288)||(14868889-14868964)
chr4 (212-288)||(14876970-14877045)
chr4 (223-298)||(21539087-21539162)
chr4 (212-290)||(49306774-49306851)
chr4 (212-294)||(10448280-10448362)
chr4 (212-290)||(13509383-13509460)
[»] chr3 (52 HSPs)
chr3 (212-298)||(29931225-29931311)
chr3 (212-298)||(29980379-29980465)
chr3 (212-298)||(54540806-54540892)
chr3 (214-298)||(8456479-8456562)
chr3 (216-298)||(7267647-7267728)
chr3 (212-298)||(7758401-7758487)
chr3 (212-300)||(12700174-12700260)
chr3 (212-295)||(29932718-29932800)
chr3 (212-295)||(29981872-29981954)
chr3 (212-290)||(54539754-54539832)
chr3 (212-295)||(55192014-55192096)
chr3 (212-290)||(19984848-19984926)
chr3 (212-298)||(22776828-22776914)
chr3 (213-298)||(47614185-47614270)
chr3 (212-300)||(12703514-12703601)
chr3 (212-296)||(53614818-53614902)
chr3 (212-298)||(534498-534584)
chr3 (216-298)||(47610596-47610678)
chr3 (212-270)||(47615592-47615650)
chr3 (212-295)||(24516459-24516542)
chr3 (216-298)||(7268843-7268924)
chr3 (216-300)||(40426792-40426877)
chr3 (212-288)||(5001199-5001275)
chr3 (212-300)||(11671355-11671442)
chr3 (212-300)||(28262192-28262279)
chr3 (212-300)||(28263125-28263213)
chr3 (212-288)||(47609696-47609772)
chr3 (212-300)||(52276303-52276391)
chr3 (212-300)||(52281561-52281649)
chr3 (212-291)||(51038813-51038892)
chr3 (213-288)||(51469972-51470047)
chr3 (212-298)||(5029699-5029784)
chr3 (213-298)||(535798-535883)
chr3 (212-300)||(18442629-18442718)
chr3 (212-300)||(19487703-19487792)
chr3 (212-290)||(19986094-19986174)
chr3 (213-298)||(51037536-51037620)
chr3 (213-298)||(52840620-52840705)
chr3 (213-300)||(18456077-18456165)
chr3 (213-289)||(46719941-46720017)
chr3 (212-288)||(51470481-51470556)
chr3 (216-298)||(34019161-34019241)
chr3 (212-298)||(8875905-8875991)
chr3 (216-298)||(23770423-23770505)
chr3 (213-298)||(53901404-53901487)
chr3 (237-289)||(6170296-6170348)
chr3 (237-289)||(6249633-6249685)
chr3 (212-295)||(23769856-23769939)
chr3 (212-298)||(46721236-46721322)
chr3 (213-287)||(49216247-49216321)
chr3 (240-289)||(31645000-31645049)
chr3 (216-298)||(52104484-52104562)
[»] scaffold0302 (2 HSPs)
scaffold0302 (212-296)||(17469-17553)
scaffold0302 (213-295)||(18795-18877)
[»] chr8 (46 HSPs)
chr8 (218-298)||(1824094-1824174)
chr8 (218-298)||(1858539-1858619)
chr8 (214-300)||(18979134-18979220)
chr8 (212-298)||(10007779-10007865)
chr8 (212-298)||(12353377-12353461)
chr8 (213-298)||(10006344-10006429)
chr8 (212-298)||(5513981-5514066)
chr8 (212-298)||(12351920-12352006)
chr8 (216-298)||(29968353-29968434)
chr8 (216-295)||(40471166-40471244)
chr8 (212-298)||(22221380-22221466)
chr8 (212-298)||(22227722-22227808)
chr8 (222-295)||(18978029-18978101)
chr8 (213-298)||(22220388-22220473)
chr8 (212-300)||(38980058-38980146)
chr8 (212-300)||(39011155-39011243)
chr8 (213-300)||(38974795-38974882)
chr8 (213-300)||(39005893-39005980)
chr8 (212-298)||(1823551-1823637)
chr8 (212-298)||(1857996-1858082)
chr8 (216-298)||(8389705-8389787)
chr8 (216-298)||(11282011-11282093)
chr8 (216-298)||(11287779-11287861)
chr8 (212-293)||(32207346-32207425)
chr8 (212-298)||(43661839-43661925)
chr8 (222-295)||(18970920-18970992)
chr8 (212-293)||(45114537-45114618)
chr8 (212-300)||(32968455-32968543)
chr8 (212-298)||(8388463-8388547)
chr8 (212-298)||(30335638-30335724)
chr8 (251-294)||(18488282-18488325)
chr8 (213-300)||(32973950-32974037)
chr8 (212-295)||(42982676-42982759)
chr8 (215-298)||(43661267-43661350)
chr8 (212-298)||(24122882-24122967)
chr8 (213-271)||(24483143-24483201)
chr8 (237-290)||(24488703-24488756)
chr8 (213-262)||(36249552-36249601)
chr8 (1-69)||(23842722-23842790)
chr8 (213-289)||(30336526-30336602)
chr8 (213-279)||(23170034-23170098)
chr8 (212-290)||(5514294-5514371)
chr8 (212-295)||(5003116-5003198)
chr8 (213-298)||(11283225-11283310)
chr8 (212-269)||(11456637-11456694)
chr8 (212-260)||(11288914-11288962)
[»] chr7 (32 HSPs)
chr7 (212-298)||(22630468-22630554)
chr7 (213-298)||(18371424-18371509)
chr7 (212-295)||(7501871-7501954)
chr7 (212-298)||(7500454-7500539)
chr7 (212-298)||(17782569-17782655)
chr7 (213-298)||(31659622-31659708)
chr7 (212-288)||(127336-127411)
chr7 (212-288)||(3227620-3227696)
chr7 (212-288)||(31949828-31949904)
chr7 (212-291)||(11658378-11658457)
chr7 (216-298)||(42886302-42886384)
chr7 (241-298)||(18372473-18372530)
chr7 (218-298)||(14999171-14999249)
chr7 (212-295)||(21505415-21505496)
chr7 (212-298)||(22629482-22629571)
chr7 (212-298)||(31949321-31949407)
chr7 (215-288)||(17781663-17781736)
chr7 (213-298)||(47525383-47525468)
chr7 (216-296)||(11662569-11662649)
chr7 (212-287)||(34174010-34174084)
chr7 (220-287)||(47524532-47524599)
chr7 (212-285)||(20163585-20163658)
chr7 (216-298)||(128617-128699)
chr7 (214-288)||(3227109-3227182)
chr7 (212-294)||(34352806-34352888)
chr7 (213-290)||(48934927-48935004)
chr7 (18-70)||(10024277-10024329)
chr7 (236-292)||(43899469-43899525)
chr7 (212-295)||(47369780-47369863)
chr7 (10-56)||(10024334-10024380)
chr7 (212-269)||(15681594-15681651)
chr7 (213-297)||(769413-769497)
[»] chr6 (29 HSPs)
chr6 (212-295)||(7316313-7316396)
chr6 (212-290)||(16704521-16704599)
chr6 (212-298)||(8659264-8659350)
chr6 (212-298)||(8821872-8821958)
chr6 (212-298)||(14822359-14822445)
chr6 (213-298)||(16703570-16703652)
chr6 (212-298)||(27437827-27437913)
chr6 (213-298)||(7314880-7314964)
chr6 (213-298)||(8822809-8822894)
chr6 (212-296)||(10784591-10784676)
chr6 (216-298)||(1829619-1829701)
chr6 (212-298)||(27322084-27322169)
chr6 (212-289)||(6842308-6842385)
chr6 (12-69)||(22536014-22536071)
chr6 (212-280)||(3721611-3721679)
chr6 (212-298)||(14823591-14823678)
chr6 (212-298)||(8660220-8660305)
chr6 (237-298)||(26575070-26575131)
chr6 (212-288)||(3722533-3722609)
chr6 (16-66)||(10041174-10041224)
chr6 (212-288)||(27318314-27318389)
chr6 (216-298)||(34834595-34834677)
chr6 (212-284)||(26574618-26574690)
chr6 (218-294)||(29473082-29473158)
chr6 (212-290)||(6840193-6840269)
chr6 (213-295)||(30495717-30495797)
chr6 (215-261)||(26717137-26717183)
chr6 (10-55)||(2961551-2961596)
chr6 (212-289)||(3333051-3333128)
[»] scaffold0320 (1 HSPs)
scaffold0320 (212-290)||(19487-19565)
[»] scaffold0019 (2 HSPs)
scaffold0019 (214-300)||(61473-61559)
scaffold0019 (213-300)||(60090-60177)
[»] scaffold2034 (2 HSPs)
scaffold2034 (213-298)||(233-318)
scaffold2034 (236-296)||(996-1056)
[»] scaffold0294 (2 HSPs)
scaffold0294 (212-295)||(5457-5540)
scaffold0294 (212-298)||(4441-4527)
[»] scaffold0003 (1 HSPs)
scaffold0003 (212-298)||(49449-49535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (213-300)||(133-220)
[»] scaffold0093 (2 HSPs)
scaffold0093 (214-298)||(2481-2564)
scaffold0093 (214-298)||(7104-7187)
[»] scaffold1303 (1 HSPs)
scaffold1303 (212-298)||(1438-1524)
[»] scaffold0632 (1 HSPs)
scaffold0632 (212-298)||(3324-3409)
[»] scaffold0059 (1 HSPs)
scaffold0059 (214-290)||(4754-4829)
[»] scaffold0045 (1 HSPs)
scaffold0045 (213-289)||(49109-49185)
[»] scaffold0112 (1 HSPs)
scaffold0112 (213-298)||(37148-37232)
[»] scaffold0642 (1 HSPs)
scaffold0642 (1-71)||(8332-8401)
[»] scaffold0586 (1 HSPs)
scaffold0586 (216-298)||(6346-6428)
[»] scaffold0345 (1 HSPs)
scaffold0345 (1-71)||(18245-18314)
[»] scaffold0186 (2 HSPs)
scaffold0186 (213-286)||(23081-23152)
scaffold0186 (212-273)||(23931-23992)
[»] scaffold0105 (1 HSPs)
scaffold0105 (1-71)||(20668-20737)


Alignment Details
Target: chr2 (Bit Score: 67; Significance: 9e-30; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 7899984 - 7899898
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  7899984 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagcccccta 7899898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 22848190 - 22848276
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctcccta 22848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 36449777 - 36449861
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  36449777 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccc 36449861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 38840595 - 38840509
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||||||    
T  38840595 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccccta 38840509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 36451018 - 36450939
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||    
T  36451018 taaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccc 36450939  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 18904366 - 18904445
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||| ||| ||||||||||||||||||||    
T  18904366 aggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttgg 18904445  T

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Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 23869636 - 23869551
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| || |||||||| ||||| |||||||||||| |||||||||||||||||||||||||| || |||||    
T  23869636 aggctaaagtgcacttttccacccttaactttaaaaac-ttgcaattttggccccctaaatacaaaaactacaattttagctcccta 23869551  T

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Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 38839241 - 38839327
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| |||| |||| |||| |||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  38839241 aggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggcccccta 38839327  T

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Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 18299373 - 18299460
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||| ||  |||||||||||| ||| ||||||||| | ||||| || ||||||||||||||||||||||||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatg 18299460  T

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Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 18906089 - 18906006
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||||| | ||||||| |||||||||||||||||| |||||    
T  18906089 aggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccc 18906006  T

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Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 18868923 - 18869001
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||| |||||||| ||  |||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  18868923 aggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

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Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 22588055 - 22587973
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||| ||||||||   |||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttgg-cccctatgtacaaaaactacaattttggcccc 22587973  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 7898694 - 7898776
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||| | | ||||| || | ||||||||||||||||||||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggcccccta 7898776  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 11258913 - 11258827
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| ||| ||| |  |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtccccta 11258827  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 11938890 - 11938805
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||||| ||||| |||||||| || ||||||| |||||||    
T  11938890 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgccccccta 11938805  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 13567975 - 13568049
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||| ||||||||||   ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

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Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 41879314 - 41879228
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||| ||||||| |||| |||| |||||||| ||||||||||||| ||||||| |||| |||||||||||||  |||||||    
T  41879314 aggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaacccccta 41879228  T

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Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 1034570 - 1034485
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||  ||| ||||| ||||||| | |||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagccccccta 1034485  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 13030293 - 13030374
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||  |||||||||||| |||| |||||||| ||||||| |||||||| ||||||||| ||||||||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttttgcccccta 13030374  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 41878092 - 41878176
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaacct---tgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||| ||||| ||||||||||||| ||   ||||||||||| ||||||| |||| |||||||||||||||||||    
T  41878092 ggctaaagtgcactttcccccc-ttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggcccc 41878176  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 18300822 - 18300743
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||| ||||||||||||||  ||||||||| || ||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  18300822 gctaaattgcacttttccccc--taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccc 18300743  T

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Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 13570659 - 13570575
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||| |||||  ||  |||||||||||| ||||||||||| ||||| ||| ||||||||||| |||||||| ||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccc 13570575  T

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Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 18797245 - 18797332
Alignment:
Q  212 aggctaaagtgcacttttcc-cccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||||||  ||| ||| ||  ||||||||||||||| |||||||    
T  18797245 aggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgacccccta 18797332  T

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Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 24476943 - 24476863
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||| ||||||||||| ||||   |||||| |||| |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  24476943 ggctagagtgcactttttccccc--aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccc 24476863  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 32739647 - 32739706
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    |||||||||||| ||||||||||||| ||| ||  |||||||||||||||||||||||||    
T  32739647 taactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

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Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 802692 - 802615
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||| ||||||||||| | || |||||||| ||||||||||||| |||||   |||||||||||||||||||    
T  802692 aggctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttg 802615  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 16446153 - 16446231
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||| |||||  || ||||||||||||| |||||||||||   | | |||||||||||||||||||||||    
T  16446153 aggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttg 16446231  T

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Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 24475248 - 24475310
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctat 299  Q
    |||||||||||| |||| |||||| | ||||||| || |||||||||||||||||||||||||    
T  24475248 taactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctat 24475310  T

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Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 22587525 - 22587585
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||  || ||||||||||||||||  |||||||||||||||||||||||||||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggcccccta 22587585  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 21837355 - 21837299
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaa 270  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||| |||||||    
T  21837355 aggctaaagtgcactttttcccc--taactttcaaaaacttgcaattttggccccctaa 21837299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 11257621 - 11257706
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| | ||  |||||||||||| |||||||||||    |||||| || ||||||||||||||||||| ||||    
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaatttt-aaaccctaagtataaaaactacaattttggcctccta 11257706  T

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Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 28617946 - 28618004
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||| ||||||||||||| |||| || |||||||||| |||||||| ||||    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccc 28618004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 10928182 - 10928234
Alignment:
Q  11 atagcagttccttttgattattattttttctttcaattaccacatagctgttc 63  Q
    ||||||||||||||| |||||||| |||||||||| ||| |||||| ||||||    
T  10928182 atagcagttccttttcattattatattttctttcagttatcacataactgttc 10928234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 1033212 - 1033284
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||| ||||||||||| | |||||| |||| ||||||||||||| ||||||||||| |||| || |||||    
T  1033212 gctaaagtgtacttttcccccct-aacttttaaaaacttgcaattttgg-cccctaaataccaaaattataattt 1033284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 810854 - 810805
Alignment:
Q  241 tttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||| ||||||||||||| |||||   |||||||||||||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttg 810805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 8534586 - 8534665
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    |||||||| |||||||||| |||| |||||||| ||| |||||||| |||  ||| || | ||||||||||||||| ||||    
T  8534586 taaagtgctcttttccccc-ttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttggtcccc 8534665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 11437301 - 11437215
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  11437301 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggcccccta 11437215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 24422799 - 24422885
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  24422799 aggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggcccccta 24422885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 11436041 - 11436127
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |   ||| || ||||||||||||||||||||||||    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggcccccta 11436127  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 52274967 - 52275053
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggccccta 52275053  T

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Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 51684366 - 51684451
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||| |||||||| ||||  |||||||||||| ||||||  || ||||||||||||||||||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggcccccta 51684451  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 15373931 - 15373868
Alignment:
Q  10 tatagcagttccttttgattattattttttctttcaattaccacatagctgttccttttcataa 73  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  15373931 tataacagttccttttgattattattttttctttcaattaccacataaccgttccttttcataa 15373868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 24426173 - 24426091
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtccccta 24426091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 35067104 - 35067018
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| |||| ||||||||  |||| ||||||| ||||||   ||||||||||||||||||||||||||    
T  35067104 aggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggcccccta 35067018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 39699867 - 39699783
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||| | ||||||||| | ||||||||||||  ||||||| |||| ||||||||||||||||||||||    
T  39699867 ggctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggcccccta 39699783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 45148581 - 45148665
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||| ||||||| || |||||||||||||||| |||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgccccccta 45148665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 23980568 - 23980489
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    |||||||||||||||||||||||  ||||||| |||| |||||||||||||  |||||| ||||||||||| ||||||||    
T  23980568 aggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttgg 23980489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 37526975 - 37526896
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||||  ||||||||| | |||| ||||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccc 37526896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 14999284 - 14999361
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||| ||||||||||| | ||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  14999284 aggctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 39222575 - 39222501
Alignment:
Q  213 ggctaaagtgcactttt-cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaat 286  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||| || ||||||||||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaat 39222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 51685867 - 51685781
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  ||||||||||||  |||| ||||||| || |||  ||||||||||||||||||| |||||||    
T  51685867 aggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgacccccta 51685781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 36614005 - 36613920
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||| |||||| ||  ||||||| |||| |||| |||||||| ||||||| ||||||||||||||||||| |||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgacccccta 36613920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 39698562 - 39698643
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcc 293  Q
    ||||||||||||||||| ||||| |||||||| |||| ||| ||||||||| ||||||| |||| |||||| ||||||||||    
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggcc 39698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 41364829 - 41364913
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||||||| ||||| ||||||| | |||||||    
T  41364829 ggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagccccccta 41364913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 45150068 - 45149989
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||| |||||    
T  45150068 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgcccccc 45149989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 52827346 - 52827422
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| |||||||    
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 52827422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 11190384 - 11190462
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||||||| ||| |||| ||| ||||  ||||||||||||| ||||| ||||||||||| ||||||||    
T  11190384 aggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaattttg 11190462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 12390083 - 12389997
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| ||||||| | |||||||||||||  |||| |||||| |||||||  |||||||| || |||||||||||||||    
T  12390083 aggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggcccccta 12389997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 39153214 - 39153140
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||||| |||| |||| |||||||| ||||||||||||| ||| ||  |||||||||||||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 39153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 44404441 - 44404527
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||| ||||||||| |||   |||||||||||| || |||||||| | ||||||| ||||||||||| |||||||||||||||    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggcccccta 44404527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 45157310 - 45157233
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||||| ||||| | || |||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  45157310 aggctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 45157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 35594216 - 35594298
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||| | ||||||| ||  ||||||||||||||| ||||    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttt-gacccctaagtattaaaactacaattttgacccc 35594298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 7674527 - 7674603
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||| |||||||||| | |||||| |||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  7674527 aggctaaagtgcccttttcccccct-aacttttaaaaacttgcaattttgggccc-taagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 33088719 - 33088641
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||||||||| |  |||| ||||||| ||||||||||||  ||  ||| |||||||||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttg 33088641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 36612852 - 36612937
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||||||||   | ||| ||||||||||||||||||  |||||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttgg-atcttaagtacaaaaactacaattttaacccccta 36612937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 39151934 - 39152008
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||| |||| |||| |||| |||||||| |||| |||||||| ||||||  |||||||||||||||||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 43378810 - 43378737
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||| | | ||||||||||||| ||| |||||||| |||||||| |||||||| ||||||||||    
T  43378810 taaagtgcacttttctctc-ttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttg 43378737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 50680335 - 50680416
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||||||||| ||||||| || |||||||| |||||| | ||||||    
T  50680335 taaagtgcatttttccccc-ttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtccccta 50680416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 50681705 - 50681627
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    |||||||||||||||||||||  |||| |||||||| |||||||||||||  | |||| || |||||||||||| ||||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattgg 50681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 52828168 - 52828086
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||  |||||| ||| ||||| ||||||| | |||||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagccccccta 52828086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 43060108 - 43060025
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||| ||||| |||||  ||||||||||||  ||| |||||||  ||| ||| ||||||||||||||||||| ||||    
T  43060108 aggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgacccc 43060025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 15000057 - 14999983
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaat 286  Q
    |||||||||| ||||||| || |  ||||||| |||| |||||||||||| |||||||| ||||||| |||||||    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 16290092 - 16290170
Alignment:
Q  212 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||||||||| |||| |||||| |||| |||||||  |||||||||||||||| ||  || |||||||||||||||    
T  16290092 aggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaatttt 16290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 43058789 - 43058866
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 294  Q
    |||||| ||||||| |||| | |||||| |||| ||||||||||||  ||||||| |||||||||||||||||| ||||    
T  43058789 taaagtacactttttccccct-aactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccc 43058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 44412030 - 44411991
Alignment:
Q  250 cttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  44412030 cttgcaattttagtcccctaagtacaaaaactacaatttt 44411991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 2129470 - 2129504
Alignment:
Q  13 agcagttccttttgattattattttttctttcaat 47  Q
    ||||||||||||| |||||||||||||||||||||    
T  2129470 agcagttccttttcattattattttttctttcaat 2129504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 2129521 - 2129571
Alignment:
Q  22 ttttgattattattttttctttcaattaccacatagctgttccttttcata 72  Q
    |||| ||||||||||||||||||||||| |||||| | ||| |||||||||    
T  2129521 tttttattattattttttctttcaattatcacatatcagtttcttttcata 2129571  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 7675560 - 7675475
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| ||||| || || ||||||||||||| ||||||||||||  | ||||| || ||||| || ||||||| |||||||    
T  7675560 aggctaaagtgtacttt-ccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgacccccta 7675475  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 7983053 - 7983134
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||| ||| | ||||||||| | ||||||||||||| ||||||  ||  ||||| ||||||||| |||||||    
T  7983053 taaagtgcacttttctcccgt-aactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgccccccta 7983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 52276261 - 52276195
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaacta 282  Q
    ||||||||||||| ||||   ||||||||||||  ||| |||||||| ||||||| |||||||||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaacta 52276195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 35595295 - 35595210
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaacctt-gcaattttggtcccctaaatacaaaaact-acaattttggcccc 295  Q
    ||||||||||| |||||||||||  ||||||| |||| ||| |||||||||  ||||||  || ||||||| ||||||||||||||    
T  35595295 aggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccc 35595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 33088091 - 33088143
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||||||||||| |||| ||||||  || |||||||| |||||||||||||||    
T  33088091 taactttcaaaaacttgtaatttttatctcctaaatataaaaactacaatttt 33088143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  212 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattt 259  Q
    |||||||| |||||||||||||| | |||||||||||| ||||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 41366232 - 41366184
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaatttt 260  Q
    ||||||||||||||||||||||   |||||||||||| | |||||||||    
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaatttt 41366184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 19752911 - 19752998
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  19752911 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatg 19752998  T

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Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 25523068 - 25523154
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||| |||||||    
T  25523068 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgacccccta 25523154  T

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Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 22940723 - 22940641
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgacccc 22940641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 19754233 - 19754144
Alignment:
Q  212 aggctaaagtgcacttttc-ccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||| ||||  ||||  |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19754233 aggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatg 19754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 18487004 - 18486918
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||| || | |||| |||||||||||||||||    
T  18487004 aggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggcccccta 18486918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 40255774 - 40255688
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  |||| ||| |||| ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  40255774 aggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggcccccta 40255688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 20216861 - 20216781
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| |  ||||| ||||||||||||||||||||||||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccc 20216781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 16650957 - 16650871
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||  ||||||| || ||||||||||||||| ||||||||    
T  16650957 aggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagcccccta 16650871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 28538675 - 28538761
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||  ||| ||| |||||||||||||||||| ||||||||    
T  28538675 aggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagcccccta 28538761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 33160388 - 33160305
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||| | ||||||| || | |||||||||||||| ||||    
T  33160388 aggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgacccc 33160305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 5778938 - 5778852
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| | ||||||| ||| ||||| ||||||| | |||||||    
T  5778938 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagccccccta 5778852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 20214196 - 20214277
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |  | |||  ||||||||||||||||||||||||    
T  20214196 ggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccc 20214277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 25055411 - 25055497
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  ||||||| ||   |||||||||||| |||||||  || ||||||||||||||||||||||||    
T  25055411 aggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggcccccta 25055497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 36486590 - 36486504
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||| |||||||||||| ||||  ||||||| |||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtccccta 36486504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 24332916 - 24332990
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||||| |||| |||| |||||||| ||||||||||||| ||| ||  |||||||||||||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 24332990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 1796054 - 1796131
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||| |||||| ||  |||||||||||| ||||||| ||||| | ||||| |||||||||||||||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 25056482 - 25056397
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| |   |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 25056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 5777900 - 5777984
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  5777900 aggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 5777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 18485137 - 18485216
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    |||||||||||||||||| ||||  ||||||| |||| ||||||||||||| ||||||| ||  ||||| ||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgg 18485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 25524230 - 25524143
Alignment:
Q  212 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||   ||| ||| ||||  ||| |||||||| ||||||| |||||||||||||||||||||| ||||    
T  25524230 aggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcctccta 25524143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 33158097 - 33158180
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||| ||||  |||  |||||||||||| ||||||||||||   |||||| ||||||||||||||||||| ||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgacccc 33158180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 18154493 - 18154570
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||| ||||||  ||| ||||||||||||| ||| ||||||| | ||||||| |||||||||||||||||||    
T  18154493 aggctaaagtgaacttttttccccttaactttcaaaaacttacaatttt-gacccctaagtacaaaaactacaattttg 18154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 28539917 - 28539836
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||| ||||||||| | |||||| |||| ||||||||||||  || |||| |||||||||||||||||||| ||||||    
T  28539917 taaagtgcatttttcccccct-aacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtccccta 28539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 5730440 - 5730517
Alignment:
Q  212 aggctaaagtgcacttttccccca-ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||   ||||| ||| ||||| |||||||    
T  5730440 aggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 2685749 - 2685820
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||| |||||| |||||||  ||| |||||||| |||  |||||||||||||||| ||||||||||||||||||    
T  2685749 taaaatgcactattccccc--taattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 5962671 - 5962588
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| || |  | ||||||||||  ||| |||||||||||||||| ||||||||||| |||||| ||| ||||    
T  5962671 ggctaaagtgcactttttccac--tgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccaccta 5962588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 7311589 - 7311675
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||    |||||  |||||||||||| |||||||| |||| | || || |||||||||||||||||| ||||||||    
T  7311589 aggctaaagtgcacccccccccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagcccccta 7311675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 42195137 - 42195217
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| |||||||| ||||  |||| ||||||| ||||||  ||||||| |||||||||||| ||||||    
T  42195137 taaagtgcacttttccccc-ttaactttaaaaag-ttgcgattttggccccctatgtacaaaatctacaattttggtccccta 42195217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 2686478 - 2686415
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||| |||| |||||||||||| || | ||| ||||||||||| |||||||| ||||||||    
T  2686478 taacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatg 2686415  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 36485302 - 36485385
Alignment:
Q  215 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||| |||||| ||  ||||||| |||| ||| ||||||||  | | ||| ||||||||||| |||||||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggcccccta 36485385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 287  Q
    |||||||||||| |||||||||||||  |||||  ||||||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 1290300 - 1290214
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||| |||||||||||||||||| ||||||||    
T  1290300 aggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagcccccta 1290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 52491709 - 52491623
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| |||||||| || ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  52491709 aggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggcccccta 52491623  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 17382992 - 17383075
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||| ||| | ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17382992 aggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccc 17383075  T

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Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 17388312 - 17388229
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  17388312 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccc 17388229  T

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Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 49308128 - 49308042
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  49308128 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatg 49308042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 8758935 - 8758856
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggcccc 8758856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 1963195 - 1963281
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||| | ||||  |||||||||||||||||| ||||||||    
T  1963195 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagcccccta 1963281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 10471489 - 10471404
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 10471404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 12129626 - 12129705
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgacccc 12129705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 25685924 - 25685838
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  25685924 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagacccccta 25685838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 8155741 - 8155822
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttgg-tcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||  |||||||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggcccccta 8155822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 19750673 - 19750591
Alignment:
Q  215 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  19750673 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttaccccccta 19750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 19789133 - 19789215
Alignment:
Q  215 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  19789133 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttaccccccta 19789215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 31599788 - 31599874
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||| |||||||||||| ||||  ||||||| |||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtccccta 31599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 31601086 - 31601004
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||| ||||  ||||||| |||| ||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgacccc 31601004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 35935631 - 35935549
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| ||||| |||||||| ||||  |||||||||| | ||||||| |||| ||||||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggcccccta 35935549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 3928960 - 3928872
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| ||||||  ||  ||||| ||||||||||||| |||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatg 3928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 1834119 - 1834202
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||||||  ||||||| |||| ||| ||||||||  ||||||  || ||||||||||||||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggccccc 1834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 8757674 - 8757752
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    |||||||||||||||||| |||| ||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||||    
T  8757674 aggctaaagtgcactttttcccc-ttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttgg 8757752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 26421723 - 26421641
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||||||||  | ||||||||||| ||||||||||||  | ||||| ||||||||||||||||||| ||||    
T  26421723 aggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgacccc 26421641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 1835204 - 1835118
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||  |  |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  1835204 aggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 1835118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 10470545 - 10470631
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  || |||| ||| ||||  ||||||| | |||||||    
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagccccccta 10470631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 48780247 - 48780333
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  ||||||| |||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  48780247 aggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 48780333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 48781147 - 48781062
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  ||||||||||||  ||||||||||||| |||||| ||| ||||| ||||||| | |||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggt-ccctaagtactaaaaccacaatttagccccccta 48781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 13386013 - 13386090
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttc-aaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||||||  |||||||| |||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  13386013 aggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 25684934 - 25685019
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||  || |||| ||| ||||| ||||||| | |||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagccccccta 25685019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 35934347 - 35934424
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||  |||||||||||| |||| |||||||||||||||| || | ||| || ||||||||||||    
T  35934347 taaagtgcacttttccccc--taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggcccc 35934424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 55603628 - 55603549
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||  ||||||   |||||||||||| ||||||||||||    
T  55603628 taaagtgcactttttcccc-ttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc 55603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 1964542 - 1964464
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    ||||||||||||||||||| || |||||||| ||||  || ||||||||| ||||||   |||||||||||||||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttgg 1964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 5526227 - 5526142
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  | ||||||||||| ||||||||||||| ||||||| ||  ||||| ||||||| | |||||||    
T  5526227 aggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagccccccta 5526142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 55602379 - 55602451
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||||| |||| ||| ||| |||||||||||||||    
T  55602379 taaagtgcatttttcccct-ttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttt 55602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 13386635 - 13386548
Alignment:
Q  212 aggctaaagtgcactttt-cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| |||||  |||||||||||| ||||||||||||  ||| ||| ||| ||||| ||||||| | |||||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagccccccta 13386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 5525359 - 5525444
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||| || ||||||||| | ||||||||||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  5525359 aggctaaagtacatttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 5525444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8194081 - 8194012
Alignment:
Q  1 ttttttatatatagcagttccttttgattattattttttctttcaattaccacatagctgttccttttcat 71  Q
    |||||| | |||||||||||||||| |||||||| |||||||| |||||||||||| | |||| |||||||    
T  8194081 ttttttttttatagcagttccttttcattattat-ttttcttttaattaccacataacggttctttttcat 8194012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 10447006 - 10447092
Alignment:
Q  213 ggctaaagtgcacttttccccc-attaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  |||| ||||||||  |||||||||| | ||||||  ||||||||| ||||||||  |||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttaccccccta 10447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 21177996 - 21178081
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| ||||| ||||| | |||||||| ||  ||||||||||| |||||||   |||||||||||||||||| |||||||    
T  21177996 aggctaaagtgtactttccccccct-aactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgacccccta 21178081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 1289100 - 1289173
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||| ||||||||||| ||||||||||||   ||| ||||||| ||| |||| || |||||||||||||||    
T  1289100 taaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaatttt 1289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 33310187 - 33310103
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||  ||   ||||||| |||| |||| |||||| |  |||||||||||||||||| ||||||||||| |||||    
T  33310187 ggctaaagtgcacttttttcc---taacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatg 33310103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 3927665 - 3927753
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||| ||||  |||| ||||||| |||| |  ||  |||||||||||||||| || |||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatg 3927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| || |||| ||  ||||| |||||||    
T  14868889 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| || |||| ||  ||||| |||||||    
T  14877045 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 21539162 - 21539087
Alignment:
Q  223 cacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||| || |||| ||| |||| ||||||||||||| | ||||| |  |||||||||||||||| |||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgacccccta 21539087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 49306774 - 49306851
Alignment:
Q  212 aggctaaagtgcactttt--cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||||||  ||||||   |||||||||| ||||||||||||| |   ||| |||||||||||||||||||    
T  49306774 aggctaaagtgcacttttttccccca---actttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 10448362 - 10448280
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 294  Q
    ||||||||||||||||  || ||  ||| ||||||||  |||| ||||| | ||||||  |||||||||||||||||||||||    
T  10448362 aggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccc 10448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 13509460 - 13509383
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||| ||||||||||| | |||||| ||||  |||||||||||| |||| || ||  |||||||||||||||    
T  13509460 aggctaaagtgtacttttcccccct-aacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttg 13509383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 29931225 - 29931311
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  29931225 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggcccccta 29931311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 29980379 - 29980465
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  29980379 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggcccccta 29980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 54540892 - 54540806
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||| ||| |||||||||||||||||||||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggcccccta 54540806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 8456479 - 8456562
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||| |||| | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 8456562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 7267647 - 7267728
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  7267647 taaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggcccccta 7267728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 7758401 - 7758487
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||| ||||||||    
T  7758401 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgcccccta 7758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 12700174 - 12700260
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  12700174 aggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatg 12700260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 29932800 - 29932718
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgacccc 29932718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 29981954 - 29981872
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgacccc 29981872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 54539754 - 54539832
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||   |||||||||||||||||||||||||||    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttg 54539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 55192096 - 55192014
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||| | ||||||||| ||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||||    
T  55192096 aggctaaagtgta-ttttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccc 55192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 19984848 - 19984926
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  19984848 aggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 19984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 22776914 - 22776828
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  ||||||||| ||  |||||||||||| ||||||  |||||||||||||||||||||||||||    
T  22776914 aggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggcccccta 22776828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 47614185 - 47614270
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| |||||||||||||||||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccccta 47614270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 12703601 - 12703514
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||| |||  | |||||||||||  ||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  12703601 aggctaaagtgcactttttccctct-aactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatg 12703514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 53614818 - 53614902
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||| |||||| || ||||||||||||| ||| ||||||| |||| ||| ||| ||||||||||||||||||||||    
T  53614818 aggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccccc 53614902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 534498 - 534584
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| ||||  ||||| |||||| ||||||||||||  | ||||  |||||||||||||||||||||||||||    
T  534498 aggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggcccccta 534584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 47610678 - 47610596
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 47610596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 47615650 - 47615592
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaa 270  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  47615650 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaa 47615592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 24516459 - 24516542
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||| ||||||||||||| ||||  ||||||| |||| |||||||||||||  |||||| || |||||||||||||||||||||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggcccc 24516542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 7268924 - 7268843
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| | ||||| || | ||||||||||||||||| ||||    
T  7268924 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctccta 7268843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 40426877 - 40426792
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaa-atacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||| |||||||| ||||  |||||| ||| | ||||| | ||||||||| ||||||||||||||||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatg 40426792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 5001199 - 5001275
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||| ||  || ||||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  5001199 aggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 11671442 - 11671355
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||| || | | ||||||||||| ||||||||||| | |||||||||| ||||||||||  |||| |||||||||    
T  11671442 aggctaaagtgcactttttccgcct-aactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatg 11671355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 28262192 - 28262279
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  28262192 aggctaaagtgcacttttccccc-ctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 28262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 28263213 - 28263125
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||| ||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  28263213 aggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 28263125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 47609696 - 47609772
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||| ||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| |||||||    
T  47609696 aggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 47609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 52276303 - 52276391
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  52276303 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccccctatg 52276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 52281649 - 52281561
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  52281649 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 52281561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 51038892 - 51038813
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    |||||||||||||||||||| || |||||||| ||||  |||||||||||  ||||||   |||||||||||||||||||    
T  51038892 aggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttgg 51038813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 51469972 - 51470047
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||| |  ||| |||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 51470047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 5029784 - 5029699
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| | | ||||||||| ||||||||||||| | ||||| ||| ||||| ||||||||  |||||||    
T  5029784 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttccccccta 5029699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 535883 - 535798
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||| |||||||| ||  |||||||||||| ||||||||||||||||| ||| ||  ||||||| ||||||  |||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcacccccta 535798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 18442629 - 18442718
Alignment:
Q  212 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||| |||||   ||||||||||||| |||| ||||||| |||| |  ||  |||||||||||||||||||||||||    
T  18442629 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatg 18442718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 19487703 - 19487792
Alignment:
Q  212 aggctaaagtgcacttttcccccat-taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||| |||||   ||||||||||||| |||| ||||||| |||| |  ||  |||||||||||||||||||||||||    
T  19487703 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatg 19487792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 19986174 - 19986094
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcc--cctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||  ||||  || ||||||||||||||||    
T  19986174 aggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttg 19986094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 51037536 - 51037620
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| ||| |||||||||||||  |||||||||||  || |||   ||||||||||||||||| ||||||||    
T  51037536 ggctaaagtgcacttttctccc-ttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagcccccta 51037620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 52840705 - 52840620
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| ||||||| ||  |||||||||||| |||||||||||||  |||||| ||  ||||| ||||||||| |||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtcccccta 52840620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 18456165 - 18456077
Alignment:
Q  213 ggctaaagtgcacttttc-ccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||| ||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 18456077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 46719941 - 46720017
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||||||||||| ||||||||| |||||||| ||||  |||| ||||||| ||||||  || |||||||||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaatttt 46720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 51470556 - 51470481
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||||||||| ||||||| | ||||||||||| |||||||||| | |||||||| ||| ||||| |||||||    
T  51470556 aggctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt 51470481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 34019241 - 34019161
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||| || ||||||||  ||||||||||||| ||||||||||||  ||||||  |||||| ||||||||||||| ||||||    
T  34019241 taaagtacatttttcccc--ttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtccccta 34019161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 8875905 - 8875991
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| ||| |||| ||  ||||   ||||||||| | ||| ||  |||||||||||||||||||||||||||    
T  8875905 aggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggcccccta 8875991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 23770505 - 23770423
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||| ||||| ||| |||| ||| ||||  || ||||||||||||| ||  |||||||||||||||||| ||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagcccccta 23770423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 53901487 - 53901404
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  ||| ||| ||||  |||||||||||   || ||| ||||||||||||||| |||||||||||    
T  53901487 ggctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggcccccta 53901404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 6170296 - 6170348
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||||||||||| |||||||||||| |||| ||| |||||||| |||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 6249633 - 6249685
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||||||||||| |||||||||||  |||| ||| ||||||||||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttt 6249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 23769856 - 23769939
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||| |||||||||||||| || ||||||||||| |  ||||||||||  ||| |||  | ||||||||||||||||| ||||    
T  23769856 aggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaattttgacccc 23769939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 46721322 - 46721236
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| |||  ||||||| ||||  |||| |||||   ||||||  |||||||||||||||||| | ||||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtccccta 46721236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 287  Q
    ||||||||||||||||||| |   ||| ||||||||  |||||||||||  ||||||  ||||||||||||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 31645000 - 31645049
Alignment:
Q  240 ctttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||||| ||| ||||||||| ||||||| | ||||||||||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaatttt 31645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 52104484 - 52104562
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||| ||||||||||||||  ||||||||||||  ||| |||||||||||  ||  ||||||||||| |||||||||| ||||    
T  52104484 taaaatgcacttttccccc--taactttcaaaaagttgtaattttggtcc--tatgtacaaaaactataattttggccaccta 52104562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 17469 - 17553
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    |||||||||||||||||| |||| |||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17469 aggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccc 17553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 18877 - 18795
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||| |||   ||||||| ||||  |||||||||||||||||||  ||||||||||| ||||||||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggcccc 18795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 1824174 - 1824094
Alignment:
Q  218 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||| |||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggcccccta 1824094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 1858619 - 1858539
Alignment:
Q  218 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||| |||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggcccccta 1858539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 18979220 - 18979134
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||  |||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatg 18979134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 10007865 - 10007779
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| || | |||| |||||||||| ||||||    
T  10007865 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtccccta 10007779  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 12353461 - 12353377
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  12353461 aggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggcccccta 12353377  T

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Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 10006344 - 10006429
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| |||||||||||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccccta 10006429  T

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Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 5513981 - 5514066
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||| |||| | ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| |||||||    
T  5513981 aggctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgccccccta 5514066  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 12351920 - 12352006
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| ||| ||||| |||||||||||||  |||||||||||  ||||||| ||||||||||||||||||| |||||||    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgacccccta 12352006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 29968434 - 29968353
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  29968434 taaagtgcacttttccccc-ttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtccccta 29968353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 40471244 - 40471166
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||||| |||||||| |||| ||| |||||||||| || |||||||||||||||||||||| |||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggt-ccataaatacaaaaactacaattttagcccc 40471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 22221466 - 22221380
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 22221380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 22227808 - 22227722
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||  ||||||| ||  ||||||||||||||| |||||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgacccccta 22227722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 18978029 - 18978101
Alignment:
Q  222 gcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||| | ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  18978029 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggcccc 18978101  T

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Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 22220388 - 22220473
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  ||||||| |||  ||||||||||||  ||||||  || ||||||||||||||||||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggcccccta 22220473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 38980146 - 38980058
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 38980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 39011243 - 39011155
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 39011155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 38974795 - 38974882
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 38974882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 39005893 - 39005980
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 39005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 1823551 - 1823637
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| |||||| |||| |||||||| |||| ||||||||||||  || |||| ||||||||||||||||| || ||||||    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtccccta 1823637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 1857996 - 1858082
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| |||||| |||| |||||||| |||| ||||||||||||  || |||| ||||||||||||||||| || ||||||    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtccccta 1858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 8389787 - 8389705
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||  |||| ||||||||  |||||||||||||||| ||  |||||||||||||||||| | ||||||    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtccccta 8389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 11282011 - 11282093
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||| |||| |||||||| ||||  |||||||||||| |||||| |||||||||  ||||||||| |||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgacccccta 11282093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 11287779 - 11287861
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||| | ||  ||||||| |||| ||||||||||||| || |||| |||| ||||||||||||||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggcccccta 11287861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 32207425 - 32207346
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcc 293  Q
    ||||||||||||||||| |||||  |||| ||||||| ||||||||||||   |||||| ||||||||||||||||||||||    
T  32207425 aggctaaagtgcactttcccccc--taaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcc 32207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 43661925 - 43661839
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||| |||||||||||||| || |||||||||||||  ||||||||||  ||| |||  ||||||||||| |||||||||||||||    
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggcccccta 43661839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 18970920 - 18970992
Alignment:
Q  222 gcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||| | ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| ||||    
T  18970920 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccc 18970992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 45114618 - 45114537
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcc 293  Q
    ||||| |||||||||||||| ||  |||||||||||| |||||||||||||| | |||  |||| |||||||||||||||||    
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcc 45114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 32968455 - 32968543
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| ||||||||||||| |||||    
T  32968455 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatg 32968543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 8388463 - 8388547
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| |||||  ||||||| ||||  |||||||||| | ||||||  ||||||||||| |||||||||||||||    
T  8388463 aggctaaagtgcactttcccccc--taacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggcccccta 8388547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 30335638 - 30335724
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| |||||| || |||||||| |||| |||||||||||||  | |||| |||||||| |||||||||  |||||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaacccccta 30335724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 18488325 - 18488282
Alignment:
Q  251 ttgcaattttggtcccctaaatacaaaaactacaattttggccc 294  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  18488325 ttgcaattttagtcccctatatacaaaaactacaattttggccc 18488282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 32974037 - 32973950
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||| ||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| ||||||||||||| |||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatg 32973950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 42982759 - 42982676
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||| || |||| ||| ||||  ||| |||||||| |||||  | |||||||||||||||||| ||||    
T  42982759 aggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgacccc 42982676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 43661267 - 43661350
Alignment:
Q  215 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||  || |||| ||| ||||  || ||||||||||||| ||  ||||||||||| |||||||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggcccccta 43661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 24122882 - 24122967
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| ||||||||| | |||||| ||||  |||||||||||  ||||||| ||||||||||| |||||| | ||||||    
T  24122882 aggctaaagtgcatttttcccccct-aactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtccccta 24122967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 24483143 - 24483201
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaa 271  Q
    |||||||||||||||||||||   ||| |||||||| ||||||||||||| ||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaaa 24483201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 24488756 - 24488703
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||| ||||||||||||| ||||||||||  ||||| |||||||||    
T  24488756 taactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg 24488703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 36249552 - 36249601
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttgg 262  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttgg 36249601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23842722 - 23842790
Alignment:
Q  1 ttttttatatatagcagttccttttgattattattttttctttcaattaccacatagctgttccttttc 69  Q
    |||||| | |||| ||||||||||| ||||| || |||||||| |||||||||||| | ||||||||||    
T  23842722 ttttttttctatatcagttcctttttattatgatattttcttttaattaccacataacggttccttttc 23842790  T

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Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 30336602 - 30336526
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||||||||||| | ||||  |||||||||||| |||  |||||| | | ||||| ||||||||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaatttt 30336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaa 279  Q
    |||||||||||| ||| |||||  ||| |||||||| |||||||||||| |||||||| ||||||||    
T  23170098 ggctaaagtgcattttcccccc--taattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 5514371 - 5514294
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||||||  ||| | || ||| |||| ||||||||||| | |  ||||||||||||||||||||||||    
T  5514371 aggctaaagtgcacttttatcccct-aattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 5003198 - 5003116
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatac-aaaaactacaattttggcccc 295  Q
    ||||||||| ||||||| |||||  |||||||||||| |||||||||||   ||||||| ||| |||||| ||||||||| ||||    
T  5003198 aggctaaagcgcactttcccccc--taactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccc 5003116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 11283310 - 11283225
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||| ||| ||||| |||||||||||||  ||| |||||| | ||||||  || |||||  |||||||||| ||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtccccta 11283225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 11456637 - 11456694
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtccccta 269  Q
    ||||||||||||||||||| |||  ||| ||||||||  |||||||||||| ||||||    
T  11456637 aggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 11288962 - 11288914
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaatttt 260  Q
    |||||||||||||||||| | ||  |||||||||||| |||||||||||    
T  11288962 aggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 22630554 - 22630468
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  22630554 aggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagcccccta 22630468  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 18371424 - 18371509
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||   |||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggcccccta 18371509  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 7501954 - 7501871
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| ||||||||||||||    
T  7501954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccc 7501871  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 7500454 - 7500539
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||| || | |||| |||||||||||||||||    
T  7500454 aggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggcccccta 7500539  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 17782655 - 17782569
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  17782655 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 17782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 31659622 - 31659708
Alignment:
Q  213 ggctaaagtgcactttt-cccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| |||||  |||||||||||| ||| ||||||||  ||||||| |||||||||||||||||||||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggcccccta 31659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 127336 - 127411
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||| ||||| |||||||    
T  127336 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaattt 127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 3227696 - 3227620
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  3227696 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 31949904 - 31949828
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||||||||| |||||||  |||||||||||| ||||||||||||| ||||||||||| ||||| |||||||    
T  31949904 aggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 31949828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 11658378 - 11658457
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttgg 291  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||| | ||||||  ||||||||||||||||||||    
T  11658378 aggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttgg 11658457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 42886384 - 42886302
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||| ||   ||||||||||||  |||||||||||  |||||||||||||||||||||||||| ||||||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagcccccta 42886302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 18372530 - 18372473
Alignment:
Q  241 tttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  18372530 tttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggcccccta 18372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 14999249 - 14999171
Alignment:
Q  218 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| | || ||||||||| |||||||||||  ||||||||||||||||||||||||||||| |||||    
T  14999249 aagtgcacttttcccccct-aattttcaaaac-ttgcaattttgaccccctaaatacaaaaactacaattttggcgcccta 14999171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 21505415 - 21505496
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||||  ||||||||||||  |||| ||||||| |||| | |||||||||||||||||||| ||||    
T  21505415 aggctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgacccc 21505496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 22629482 - 22629571
Alignment:
Q  212 aggctaaagtgcacttttccccca---ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||| |||||||||    |||| |||||||| |||| |||||||| | ||||| |||||||||||||||||||||||||||    
T  22629482 aggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggcccccta 22629571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 31949321 - 31949407
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||| |  ||| |||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  31949321 aggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 31949407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 17781663 - 17781736
Alignment:
Q  215 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| ||||| |||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 17781736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 47525468 - 47525383
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||| | ||||||| ||  ||||| ||||||| | |||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagccccccta 47525383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 11662649 - 11662569
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| |  | |||  ||||||||||| |||||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccc 11662569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 34174084 - 34174010
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 287  Q
    ||||||||||||||||||||||| | | ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||    
T  34174084 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  220 gtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatt 287  Q
    |||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaa 285  Q
    |||||||||||||||| ||| ||  |||||||||||| |||||||||||||  |||||  ||||||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 128699 - 128617
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| |  ||||||||||||  |||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 3227109 - 3227182
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||||||||| ||||| | || |||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 34352888 - 34352806
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 294  Q
    |||||||||||||||||| | ||  ||| |||||||| ||| | ||||||||||| ||| |||| |||||| |||||||||||    
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccc 34352806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 48935004 - 48934927
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||| |||||| ||  |||||||||||| |||| |||||||  || |||| ||||||||||| |||||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttg 48934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 10024329 - 10024277
Alignment:
Q  18 ttccttttgattattattttttctttcaattaccacatagctgttccttttca 70  Q
    |||||||| ||||||||||||||||||  |||| ||||||| |||||||||||    
T  10024329 ttcctttttattattattttttctttcggttacgacatagcagttccttttca 10024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 43899469 - 43899525
Alignment:
Q  236 ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggc 292  Q
    ||||||||||||| |||||||||||| ||  ||||||| ||||| ||||||||||||    
T  43899469 ttaactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttggc 43899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 47369780 - 47369863
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||| |||||||||   ||  |||||||||||| ||||||||||| | | | ||| ||||||||||| ||||||||||||    
T  47369780 aggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggcccc 47369863  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 10024380 - 10024334
Alignment:
Q  10 tatagcagttccttttgattattattttttctttcaattaccacata 56  Q
    ||||||||||| |||| |||||||||| |||||||||||| ||||||    
T  10024380 tatagcagttcattttcattattatttattctttcaattatcacata 10024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 15681594 - 15681651
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtccccta 269  Q
    ||||||||||| ||||||| |||||||| ||| ||||  |||| ||||||||||||||    
T  15681594 aggctaaagtgaacttttcacccattaagttttaaaaagttgcgattttggtccccta 15681651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 769413 - 769497
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccct 297  Q
    |||||||||||| |||||| ||  ||| |||||||| ||||||||||||    ||||| |||||||| || ||||||||| ||||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctccct 769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 7316396 - 7316313
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||   |||| ||||||||||||||    
T  7316396 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggcccc 7316313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 16704599 - 16704521
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  16704599 aggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 16704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 8659264 - 8659350
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  8659264 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 8659350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 8821872 - 8821958
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||| | |||||||    
T  8821872 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagccccccta 8821958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 14822359 - 14822445
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||| |||||||||||| ||| |||| |||||||| ||||||||||||| ||| ||| || | ||||||||||||||||||||||    
T  14822359 aggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggcccccta 14822445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 16703570 - 16703652
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  || ||||||||| |||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  16703570 ggctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatcca-taaatacaaaaactacaattttagcccccta 16703652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 27437827 - 27437913
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| ||| |||||||| ||||  |||||||||||| |||||| | | |||||||||||||||| |||||||    
T  27437827 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgacccccta 27437913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 7314880 - 7314964
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||  ||||| ||||||||| |||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtatcaaaacaacaattttgacccccta 7314964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 8822894 - 8822809
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||  ||||||| ||| ||||| ||||||| | |||||||    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagccccccta 8822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 10784591 - 10784676
Alignment:
Q  212 aggctaaagtgcacttttccc-ccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    ||||||||||||||||||||| || |||||||| |||| |||||||||||   ||||||| || ||||||||||||||||||||||    
T  10784591 aggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggccccc 10784676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 1829701 - 1829619
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||  |||  ||||||| |||| ||||||||||||  ||||||| || ||||||||||||||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggcccccta 1829619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 27322169 - 27322084
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| | | ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||  |||||||    
T  27322169 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccccta 27322084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 6842385 - 6842308
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||||||||||||||||||||||  ||| ||||||||  |||||||||||| ||||||  | ||||||||||||||||    
T  6842385 aggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 22536014 - 22536071
Alignment:
Q  12 tagcagttccttttgattattattttttctttcaattaccacatagctgttccttttc 69  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||    
T  22536014 tagcagttccttttcattattattttttctttcagttaccacatagcacttccttttc 22536071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 3721611 - 3721679
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaac 280  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||| ||| |||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaac 3721679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 14823678 - 14823591
Alignment:
Q  212 aggctaaagtgcacttttc-ccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||  |||| |||| ||| |||| ||||||||||| | ||| ||| |||| ||||||||||||||||||||||    
T  14823678 aggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggcccccta 14823591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 8660305 - 8660220
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||||| | ||||||| ||| ||||| ||||||| | |||||||    
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaatttt-gacccctaagtaccaaaaccacaatttagccccccta 8660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 26575131 - 26575070
Alignment:
Q  237 taactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||| |||||||||||   ||| ||| |||||||||||||||||||||||||||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggcccccta 26575070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 3722609 - 3722533
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||  || |||| ||| ||||| |||||||    
T  3722609 aggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 10041224 - 10041174
Alignment:
Q  16 agttccttttgattattattttttctttcaattaccacatagctgttcctt 66  Q
    |||||||||| ||||||||||||||||||||| |||||||| | |||||||    
T  10041224 agttccttttcattattattttttctttcaataaccacataacagttcctt 10041174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 27318314 - 27318389
Alignment:
Q  212 aggctaaagtgcac-ttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattt 288  Q
    |||||||||||||| |||||||||  || ||||||||| ||||||||||||| ||||||| ||| ||||| |||||||    
T  27318314 aggctaaagtgcaccttttccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 34834677 - 34834595
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||| |  |||||||||||| |||||||||||| || ||||| ||  ||||| ||||||| | |||||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagccccccta 34834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 26574618 - 26574690
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactaca 284  Q
    ||||||||||||| ||| || ||  |||||||||||| ||||||||||||  || |||| |||||||||||||    
T  26574618 aggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca 26574690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 29473082 - 29473158
Alignment:
Q  218 aagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccc 294  Q
    ||||||||||||||||| |||| ||| ||||  ||||||||||||| |||||   |||||||  |||||||||||||    
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccc 29473158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 6840193 - 6840269
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||| ||||||||||| ||||  |||| ||||||||  |||| ||||||| ||| ||||||||||||||| |||||||    
T  6840193 aggctgaagtgcactttccccc--ttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttg 6840269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 30495797 - 30495717
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    ||||||||||||||||| ||||  ||||||||||||  |||| |||||  |||||||  ||||||||  ||||||||||||||    
T  30495797 ggctaaagtgcactttttcccc--taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccc 30495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 26717183 - 26717137
Alignment:
Q  215 ctaaagtgcacttttcccccattaactttcaaaaccttgcaattttg 261  Q
    |||||||||||||||||||| |||| ||||| || ||||||||||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttg 26717137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 2961551 - 2961596
Alignment:
Q  10 tatagcagttccttttgattattattttttctttcaattaccacat 55  Q
    |||| |||||||||||  ||||||||||||| ||||||||||||||    
T  2961551 tataacagttccttttcgttattattttttcattcaattaccacat 2961596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 3333128 - 3333051
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    |||||||| |||||||||||||   ||| ||| ||||  |||| ||||||| ||||||  ||||||||||||||||||    
T  3333128 aggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaatttt 3333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 19487 - 19565
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  19487 aggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttg 19565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 61559 - 61473
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    |||||||||||||||||| || |||| |||||||| ||||||||||| | ||||||| ||||||||||| |||||||||||||||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatg 61473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 60090 - 60177
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||| ||  ||||||| |||| ||||||||||||  ||||||  || |||||||||||||||| |||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatg 60177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 233 - 318
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||| ||||| |||||||||||||  |||||||||||||||||||  ||||||||||| |||||||| ||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtccccta 318  T

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Target: scaffold2034; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 1056 - 996
Alignment:
Q  236 ttaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccc 296  Q
    |||||||| ||||  |||||||||||||||| ||  ||||||||||| |||||||||||||    
T  1056 ttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccc 996  T

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Target: scaffold0294 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 5540 - 5457
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccc 295  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||||  ||| ||| ||||||||||||||||||| ||||    
T  5540 aggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgccccc 5457  T

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Target: scaffold0294; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 4441 - 4527
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||| ||| ||||  ||| |||||||| ||| ||||||| | ||| ||| |||||||| |||||||||  |||||||    
T  4441 aggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttaccccccta 4527  T

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Target: scaffold0003 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 49535 - 49449
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||| ||| |||||||| ||||  |||||||||||| |||||| | | |||||||||||||||| |||||||    
T  49535 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgacccccta 49449  T

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Target: scaffold0227 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 220 - 133
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggccccctatg 300  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||| |  ||  ||||| |||||||||||||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatg 133  T

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Target: scaffold0093 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 2564 - 2481
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaac-cttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||  ||||||| ||||||||| || ||||||||||||||    
T  2564 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggcccccta 2481  T

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Target: scaffold0093; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 7187 - 7104
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaac-cttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||  ||||||| ||||||||| || ||||||||||||||    
T  7187 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggcccccta 7104  T

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Target: scaffold1303 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 1438 - 1524
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||| |||||||||||  ||||||| |||| ||||||||||||  ||||||  || |||||||| ||||||| |||||||    
T  1438 aggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgacccccta 1524  T

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Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 3409 - 3324
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| ||||||||  ||| ||  ||||||||||| |||||||| ||||||    
T  3409 aggctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtccccta 3324  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 4829 - 4754
Alignment:
Q  214 gctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttg 290  Q
    ||||||||||||||| || || | |||||| |||| | ||||||||||| |||||||||||| ||||||||||||||    
T  4829 gctaaagtgcactttccctccct-aacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttg 4754  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaatttt 289  Q
    ||||||| ||||||||||| || |||||||| |||| ||||||||||||| | ||||| ||  ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 37148 - 37232
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaacctt-gcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    ||||||||||||||||||||||  || |||| ||||  || |||||||||  ||||||| ||||||||| |||||||||||||||||    
T  37148 ggctaaagtgcacttttccccc--tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggcccccta 37232  T

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Target: scaffold0642 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8332 - 8401
Alignment:
Q  1 ttttttatatatagcagttccttttgattattattttttctttcaattaccacatagctgttccttttcat 71  Q
    |||||| | |||||||||||||||| ||||||| ||||||||| |||||||||||| | |||| |||||||    
T  8332 ttttttttttatagcagttccttttcattatta-tttttcttttaattaccacataacggttctttttcat 8401  T

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Target: scaffold0586 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 6346 - 6428
Alignment:
Q  216 taaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaattttggcccccta 298  Q
    |||||||||||||||| || |||| ||||||||  || | ||||| | ||||||  ||||||||||||||||||| |||||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgacccccta 6428  T

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Target: scaffold0345 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18245 - 18314
Alignment:
Q  1 ttttttatatatagcagttccttttgattattattttttctttcaattaccacatagctgttccttttcat 71  Q
    |||||| | |||||||||||||||| ||||||| ||||||||| |||||||||||| | |||| |||||||    
T  18245 ttttttttttatagcagttccttttcattatta-tttttcttttaattaccacataacggttctttttcat 18314  T

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Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 23081 - 23152
Alignment:
Q  213 ggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaatacaaaaactacaat 286  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||  || |||| ||| ||||| |||||    
T  23081 ggctaaagtgcacttttccccc--taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaat 23152  T

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Target: scaffold0186; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 23992 - 23931
Alignment:
Q  212 aggctaaagtgcacttttcccccattaactttcaaaaccttgcaattttggtcccctaaata 273  Q
    ||||||||||||||||||  | |  |||||||||||| |||||||||||||  |||||||||    
T  23992 aggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaata 23931  T

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Target: scaffold0105 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20737 - 20668
Alignment:
Q  1 ttttttatatatagcagttccttttgattattattttttctttcaattaccacatagctgttccttttcat 71  Q
    |||||| | |||||||||||||||| |||||||| |||||||| |||||||||||| | |||| |||||||    
T  20737 ttttttttttatagcagttccttttcattattat-ttttcttttaattaccacataacggttctttttcat 20668  T

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