View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15036_high_42 (Length: 242)
Name: NF15036_high_42
Description: NF15036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15036_high_42 |
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Alignment Details
Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 28 - 225
Target Start/End: Complemental strand, 30516885 - 30516688
Alignment:
| Q |
28 |
gaagcacttgttagtattttcttatatttaaaataaaacgagggtatgttaagtactgattggtagtaataattagtaagatgcaaagttagaattggca |
127 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30516885 |
gaagcacttgttagtattttcttatatttaaaataaaacgagggtatgttaagtactgattggtagtaataattagtaagatgcaaagttagaattggca |
30516786 |
T |
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| Q |
128 |
acttactttccactctattcctagttcgcatattcgagtgttctcactcttttcctttaccttacgcactcatcgcctcctagatattttctcttgtc |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
30516785 |
acttactttccactctattcctagttcgcatattcgagtgttctcactcttttcctttaccttacgtactcatcgcctcctagatattttctcttgtc |
30516688 |
T |
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