View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15036_low_17 (Length: 361)
Name: NF15036_low_17
Description: NF15036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15036_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 18 - 354
Target Start/End: Complemental strand, 45308151 - 45307815
Alignment:
| Q |
18 |
gttagcataatattaaattatttacaggccttgtggctttataggggaaaagggtgaagctgtccgttctgaaatgttgtcccttggcttggagtgtgat |
117 |
Q |
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| T |
45308151 |
gttagcataatattaaattatttacaggtcttgtggctttataggggaaaagggtgaagctgtccgttctgaaatgttgtcccttggcttggagtgtgat |
45308052 |
T |
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| Q |
118 |
tgcttccatcatgttttgtcgttgcaagatgctagcagctgcagctcttgggaaatacagaaattctcaattttagactaagaccagtgtcacctgatcg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45308051 |
tgcttccatcatgttttgtcgttgcaagatgctagcagctgcagctcttgggaaatacagaaattctcaattttagactaagaccagtgtcacctgatcg |
45307952 |
T |
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| Q |
218 |
attttttatgaaaacaatgcaattatgcgtgtacctgtggacatactttgtataattggcttaacttttataaacgaatctcaactctaatattatcaag |
317 |
Q |
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| T |
45307951 |
attttttatgaaaacaatgcaattatgcgtgtacctgtggacatactttgtataattggcttaacttttataaacgaatctcaactctaatattatcaag |
45307852 |
T |
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| Q |
318 |
gaatcaaaagctgtttttcttaattccccctatgctt |
354 |
Q |
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|||||||||||||||||||||||||||||| |||||| |
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| T |
45307851 |
gaatcaaaagctgtttttcttaattccccccatgctt |
45307815 |
T |
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