View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15037_low_6 (Length: 239)
Name: NF15037_low_6
Description: NF15037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15037_low_6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 38090144 - 38090367
Alignment:
| Q |
16 |
ttcttagtattccacattctagtaccagtgtcttcttcagattctgtgatccaacataataatattaataccaataatacccttcttcagtgtctttctc |
115 |
Q |
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| T |
38090144 |
ttcttagtattccacattctagtaccagtgtcttcttcagattctttgatccaacataataatattaataccaataatacccttcttcagtgtctttctc |
38090243 |
T |
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| Q |
116 |
tctattcagaatcttctaatccaatctcagaagttacctatttcccaaacacaccttcatattcacccaccttaaactcctacatcagaaaccttagatt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38090244 |
tctattcagaatcttctaatccaatctcagaagttacctatttcccaaacacaccttcatattcacccaccttaaactcctacatcagaaaccttagatt |
38090343 |
T |
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| Q |
216 |
caactcatccactactccaaaacc |
239 |
Q |
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|||||||||||||||||||||||| |
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| T |
38090344 |
caactcatccactactccaaaacc |
38090367 |
T |
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