View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15038_high_13 (Length: 394)

Name: NF15038_high_13
Description: NF15038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15038_high_13
NF15038_high_13
[»] chr1 (53 HSPs)
chr1 (35-258)||(42866278-42866501)
chr1 (38-258)||(28234799-28235019)
chr1 (38-258)||(44257770-44257990)
chr1 (36-258)||(3355400-3355622)
chr1 (35-236)||(24984048-24984249)
chr1 (38-259)||(46535157-46535370)
chr1 (38-258)||(12792670-12792882)
chr1 (38-259)||(48303086-48303298)
chr1 (38-183)||(9293697-9293842)
chr1 (38-258)||(1846797-1846998)
chr1 (76-258)||(50655447-50655628)
chr1 (258-394)||(36839852-36839988)
chr1 (54-206)||(4224979-4225131)
chr1 (56-258)||(32364121-32364323)
chr1 (78-206)||(5384697-5384825)
chr1 (78-258)||(37034810-37034981)
chr1 (61-259)||(3014078-3014275)
chr1 (62-257)||(7156139-7156333)
chr1 (57-258)||(16914392-16914593)
chr1 (153-258)||(33690159-33690264)
chr1 (54-258)||(44410712-44410916)
chr1 (153-258)||(962493-962598)
chr1 (153-258)||(3252226-3252331)
chr1 (189-258)||(9293642-9293711)
chr1 (153-258)||(45193197-45193302)
chr1 (158-258)||(18032287-18032387)
chr1 (156-257)||(3794153-3794247)
chr1 (153-258)||(20725983-20726088)
chr1 (54-258)||(24638702-24638903)
chr1 (177-258)||(41983794-41983875)
chr1 (155-214)||(46545424-46545483)
chr1 (156-258)||(49241642-49241744)
chr1 (157-258)||(19554196-19554297)
chr1 (155-203)||(11191410-11191458)
chr1 (52-127)||(34143554-34143629)
chr1 (161-258)||(20117850-20117947)
chr1 (175-256)||(40960232-40960313)
chr1 (158-255)||(50358969-50359066)
chr1 (158-258)||(43064706-43064806)
chr1 (76-258)||(50323330-50323512)
chr1 (35-131)||(8256022-8256117)
chr1 (153-189)||(52585217-52585253)
chr1 (1-35)||(6739818-6739852)
chr1 (1-34)||(3653480-3653513)
chr1 (1-34)||(18417427-18417460)
chr1 (169-258)||(31986099-31986188)
chr1 (1-34)||(41050991-41051024)
chr1 (1-34)||(48427162-48427195)
chr1 (2-34)||(19667483-19667515)
chr1 (2-34)||(20639660-20639692)
chr1 (2-34)||(29152155-29152187)
chr1 (153-258)||(45774760-45774861)
chr1 (155-195)||(51727119-51727159)
[»] chr8 (44 HSPs)
chr8 (35-258)||(42063462-42063685)
chr8 (38-258)||(40485436-40485656)
chr8 (38-258)||(41726241-41726461)
chr8 (38-258)||(19726596-19726816)
chr8 (38-259)||(30360454-30360675)
chr8 (38-258)||(3655857-3656077)
chr8 (38-258)||(14910095-14910315)
chr8 (38-258)||(31008418-31008638)
chr8 (38-258)||(36658515-36658727)
chr8 (38-258)||(13487033-13487252)
chr8 (38-206)||(5969886-5970054)
chr8 (61-206)||(39375166-39375311)
chr8 (78-258)||(18656555-18656727)
chr8 (78-257)||(44056425-44056604)
chr8 (95-258)||(36833904-36834067)
chr8 (78-258)||(27679187-27679359)
chr8 (78-258)||(4455278-4455450)
chr8 (153-258)||(8014919-8015024)
chr8 (89-186)||(39024465-39024562)
chr8 (106-249)||(28761632-28761775)
chr8 (155-258)||(32493185-32493288)
chr8 (35-204)||(12639248-12639407)
chr8 (153-242)||(6545699-6545788)
chr8 (134-259)||(29867727-29867852)
chr8 (153-259)||(11031029-11031135)
chr8 (153-258)||(597234-597338)
chr8 (38-258)||(1916344-1916563)
chr8 (163-258)||(40337561-40337656)
chr8 (153-258)||(20821794-20821899)
chr8 (169-258)||(26403638-26403727)
chr8 (153-214)||(31893204-31893265)
chr8 (229-260)||(16088434-16088465)
chr8 (188-259)||(43487523-43487594)
chr8 (1-35)||(33799198-33799232)
chr8 (158-220)||(39533900-39533962)
chr8 (1-34)||(14737617-14737650)
chr8 (2-35)||(26486815-26486848)
chr8 (1-34)||(35540351-35540384)
chr8 (2-34)||(21981413-21981445)
chr8 (2-34)||(21986332-21986364)
chr8 (2-34)||(22003540-22003572)
chr8 (2-34)||(23225541-23225573)
chr8 (134-258)||(36823421-36823545)
chr8 (2-34)||(41242953-41242985)
[»] chr7 (48 HSPs)
chr7 (38-258)||(36099571-36099791)
chr7 (38-258)||(36858133-36858353)
chr7 (38-258)||(11734125-11734345)
chr7 (38-258)||(29983235-29983455)
chr7 (35-258)||(44605812-44606035)
chr7 (61-258)||(16216911-16217108)
chr7 (61-257)||(10198308-10198504)
chr7 (38-258)||(47423453-47423667)
chr7 (63-258)||(24096628-24096823)
chr7 (85-256)||(33628189-33628360)
chr7 (35-258)||(20131233-20131456)
chr7 (35-258)||(16198589-16198811)
chr7 (38-137)||(14801875-14801974)
chr7 (38-137)||(15248867-15248966)
chr7 (71-258)||(46170641-46170828)
chr7 (153-258)||(9822519-9822624)
chr7 (153-258)||(10724444-10724549)
chr7 (169-258)||(14801974-14802063)
chr7 (169-258)||(15248966-15249055)
chr7 (153-258)||(45269448-45269553)
chr7 (136-258)||(1582155-1582277)
chr7 (60-258)||(34259179-34259377)
chr7 (54-258)||(34191802-34192006)
chr7 (60-259)||(31813487-31813686)
chr7 (60-258)||(10992621-10992819)
chr7 (169-256)||(5418899-5418986)
chr7 (163-258)||(30801677-30801772)
chr7 (155-212)||(25069344-25069401)
chr7 (88-220)||(8419900-8420032)
chr7 (158-258)||(33610590-33610690)
chr7 (163-258)||(31958642-31958737)
chr7 (155-206)||(45498883-45498934)
chr7 (156-258)||(17833666-17833767)
chr7 (1-35)||(40685594-40685628)
chr7 (1-34)||(749152-749185)
chr7 (1-34)||(11878369-11878402)
chr7 (225-258)||(18194988-18195021)
chr7 (161-258)||(20623149-20623246)
chr7 (1-34)||(30603653-30603686)
chr7 (1-34)||(39050167-39050200)
chr7 (1-34)||(48988760-48988793)
chr7 (2-34)||(13964822-13964854)
chr7 (2-34)||(15630779-15630811)
chr7 (2-34)||(15811437-15811469)
chr7 (1-33)||(32626699-32626731)
chr7 (2-34)||(37284512-37284544)
chr7 (2-34)||(46649090-46649122)
chr7 (1-37)||(49149204-49149240)
[»] chr6 (24 HSPs)
chr6 (38-258)||(24068080-24068300)
chr6 (35-258)||(21289551-21289773)
chr6 (38-258)||(30269593-30269803)
chr6 (38-258)||(22351135-22351347)
chr6 (35-256)||(31513254-31513474)
chr6 (61-258)||(8464281-8464477)
chr6 (78-258)||(13630203-13630375)
chr6 (54-258)||(23595691-23595895)
chr6 (35-159)||(31504628-31504751)
chr6 (169-258)||(6817290-6817379)
chr6 (106-258)||(29419720-29419863)
chr6 (121-258)||(21528807-21528944)
chr6 (158-259)||(30426317-30426418)
chr6 (204-258)||(34779971-34780025)
chr6 (153-220)||(11465359-11465426)
chr6 (1-35)||(16224482-16224516)
chr6 (2-35)||(95302-95335)
chr6 (1-34)||(33874089-33874122)
chr6 (2-34)||(14617012-14617044)
chr6 (2-34)||(19448684-19448716)
chr6 (2-34)||(19450678-19450710)
chr6 (2-34)||(19457065-19457097)
chr6 (2-34)||(19467210-19467242)
chr6 (2-34)||(30800246-30800278)
[»] chr3 (49 HSPs)
chr3 (38-258)||(30464969-30465189)
chr3 (38-258)||(23241745-23241965)
chr3 (38-258)||(39850695-39850915)
chr3 (38-258)||(33634883-33635103)
chr3 (35-258)||(29025259-29025492)
chr3 (38-258)||(2849148-2849367)
chr3 (38-258)||(26725552-26725763)
chr3 (56-261)||(55257998-55258190)
chr3 (38-258)||(37599769-37599976)
chr3 (35-257)||(44832412-44832626)
chr3 (38-258)||(10259097-10259297)
chr3 (38-202)||(11335545-11335709)
chr3 (85-258)||(33987149-33987322)
chr3 (38-156)||(11676143-11676261)
chr3 (56-258)||(51537090-51537292)
chr3 (63-265)||(29727730-29727932)
chr3 (62-258)||(45096288-45096485)
chr3 (78-258)||(52404273-52404445)
chr3 (63-203)||(45158515-45158655)
chr3 (153-258)||(53351171-53351276)
chr3 (54-258)||(42217060-42217264)
chr3 (40-258)||(42907769-42907985)
chr3 (85-256)||(5123764-5123927)
chr3 (176-257)||(11412513-11412594)
chr3 (54-258)||(15100604-15100808)
chr3 (56-258)||(11574994-11575196)
chr3 (38-258)||(41462237-41462457)
chr3 (155-258)||(35054709-35054812)
chr3 (153-258)||(11018705-11018809)
chr3 (186-259)||(11676262-11676334)
chr3 (85-258)||(27002522-27002686)
chr3 (153-256)||(6101918-6102021)
chr3 (67-219)||(50007206-50007358)
chr3 (121-258)||(51229476-51229613)
chr3 (63-147)||(44201210-44201294)
chr3 (209-258)||(33897542-33897591)
chr3 (226-258)||(44201109-44201141)
chr3 (170-258)||(45104126-45104214)
chr3 (186-258)||(53724061-53724133)
chr3 (1-36)||(28752022-28752057)
chr3 (1-34)||(21152291-21152324)
chr3 (226-259)||(21635404-21635437)
chr3 (1-34)||(23866616-23866649)
chr3 (1-34)||(28758191-28758224)
chr3 (1-34)||(29492777-29492810)
chr3 (2-34)||(9772726-9772758)
chr3 (2-34)||(10767039-10767071)
chr3 (2-34)||(12356754-12356786)
chr3 (2-34)||(54834019-54834051)
[»] chr2 (43 HSPs)
chr2 (38-258)||(17513020-17513240)
chr2 (38-258)||(24128753-24128973)
chr2 (38-258)||(7153437-7153656)
chr2 (38-258)||(39061812-39062024)
chr2 (38-258)||(37314825-37315037)
chr2 (38-259)||(39678303-39678524)
chr2 (38-258)||(29523774-29523986)
chr2 (58-258)||(23293088-23293289)
chr2 (38-257)||(31900414-31900625)
chr2 (55-258)||(35305196-35305399)
chr2 (78-256)||(14885301-14885471)
chr2 (63-258)||(16106623-16106818)
chr2 (153-258)||(19881939-19882044)
chr2 (134-258)||(3988705-3988829)
chr2 (54-259)||(39761758-39761963)
chr2 (158-258)||(32878717-32878817)
chr2 (91-258)||(21800619-21800786)
chr2 (35-267)||(27905613-27905847)
chr2 (35-259)||(29781415-29781639)
chr2 (153-258)||(23250969-23251074)
chr2 (54-258)||(6065410-6065614)
chr2 (158-258)||(10810561-10810661)
chr2 (163-258)||(18540658-18540753)
chr2 (153-258)||(22315189-22315294)
chr2 (85-258)||(37484403-37484576)
chr2 (158-258)||(16457751-16457851)
chr2 (121-258)||(7501379-7501516)
chr2 (133-258)||(12365511-12365636)
chr2 (158-258)||(37255988-37256088)
chr2 (120-198)||(20907131-20907209)
chr2 (163-258)||(30963007-30963102)
chr2 (184-258)||(21614874-21614948)
chr2 (1-34)||(4076722-4076755)
chr2 (1-34)||(11361093-11361126)
chr2 (56-133)||(16106546-16106623)
chr2 (1-34)||(28926762-28926795)
chr2 (2-35)||(35244795-35244828)
chr2 (1-34)||(36985381-36985414)
chr2 (121-258)||(37032776-37032913)
chr2 (153-258)||(37254832-37254937)
chr2 (1-34)||(42552465-42552498)
chr2 (2-34)||(33354-33386)
chr2 (2-38)||(1060957-1060993)
[»] scaffold0070 (1 HSPs)
scaffold0070 (38-258)||(12721-12941)
[»] chr5 (44 HSPs)
chr5 (38-258)||(36745750-36745970)
chr5 (38-258)||(40143904-40144124)
chr5 (38-258)||(27194655-27194875)
chr5 (35-258)||(3752454-3752677)
chr5 (38-258)||(38040623-38040843)
chr5 (35-258)||(14635345-14635578)
chr5 (38-258)||(8760987-8761197)
chr5 (38-258)||(35758035-35758245)
chr5 (35-201)||(26166090-26166256)
chr5 (53-206)||(29293358-29293511)
chr5 (71-258)||(6273128-6273315)
chr5 (91-258)||(17644142-17644309)
chr5 (63-257)||(39051843-39052036)
chr5 (92-258)||(14351875-14352041)
chr5 (153-258)||(29823257-29823362)
chr5 (153-256)||(13956932-13957035)
chr5 (91-258)||(18942249-18942416)
chr5 (91-258)||(35456507-35456674)
chr5 (60-258)||(6459707-6459905)
chr5 (57-258)||(32383790-32383991)
chr5 (61-134)||(389619-389692)
chr5 (38-87)||(6514364-6514413)
chr5 (181-258)||(17421303-17421380)
chr5 (197-259)||(389696-389758)
chr5 (156-258)||(43581683-43581785)
chr5 (155-258)||(23015033-23015136)
chr5 (157-258)||(33112208-33112309)
chr5 (185-258)||(814803-814876)
chr5 (1-34)||(5583103-5583136)
chr5 (1-34)||(15460722-15460755)
chr5 (1-34)||(18895820-18895853)
chr5 (2-35)||(20339845-20339878)
chr5 (1-34)||(30780319-30780352)
chr5 (1-34)||(37540840-37540873)
chr5 (1-34)||(37548384-37548417)
chr5 (1-34)||(40011797-40011830)
chr5 (189-258)||(41046683-41046752)
chr5 (1-34)||(43028292-43028325)
chr5 (2-34)||(19801150-19801182)
chr5 (2-34)||(20346440-20346472)
chr5 (2-34)||(22500246-22500278)
chr5 (2-34)||(22506824-22506856)
chr5 (2-34)||(25845595-25845627)
chr5 (2-34)||(25852230-25852262)
[»] chr4 (37 HSPs)
chr4 (38-258)||(23611420-23611640)
chr4 (39-258)||(55497461-55497672)
chr4 (38-258)||(11792384-11792594)
chr4 (35-205)||(7648075-7648245)
chr4 (61-258)||(1936413-1936610)
chr4 (78-258)||(25232594-25232774)
chr4 (63-259)||(12704564-12704760)
chr4 (61-258)||(55675420-55675617)
chr4 (35-259)||(8260925-8261139)
chr4 (35-259)||(8274342-8274556)
chr4 (53-258)||(28359573-28359778)
chr4 (91-258)||(4414415-4414582)
chr4 (63-259)||(44352086-44352282)
chr4 (156-259)||(24394072-24394175)
chr4 (109-258)||(24776120-24776269)
chr4 (54-261)||(8132788-8132995)
chr4 (61-258)||(54822047-54822244)
chr4 (157-258)||(19916433-19916534)
chr4 (163-258)||(32988247-32988342)
chr4 (38-258)||(29695316-29695535)
chr4 (170-261)||(2859416-2859507)
chr4 (153-258)||(6354968-6355073)
chr4 (153-258)||(43245714-43245819)
chr4 (127-258)||(2039082-2039213)
chr4 (121-258)||(26203643-26203780)
chr4 (156-258)||(38519287-38519389)
chr4 (158-220)||(38465206-38465268)
chr4 (170-257)||(5360585-5360672)
chr4 (55-258)||(7362121-7362322)
chr4 (1-36)||(52499799-52499834)
chr4 (35-69)||(9374878-9374912)
chr4 (1-34)||(390375-390408)
chr4 (1-34)||(3260790-3260823)
chr4 (229-258)||(9321015-9321044)
chr4 (169-258)||(25510487-25510576)
chr4 (2-34)||(1583159-1583191)
chr4 (161-213)||(34856052-34856104)
[»] scaffold0036 (1 HSPs)
scaffold0036 (48-258)||(51909-52119)
[»] scaffold0231 (1 HSPs)
scaffold0231 (58-258)||(10935-11136)
[»] scaffold0242 (1 HSPs)
scaffold0242 (85-258)||(17782-17955)
[»] scaffold0116 (1 HSPs)
scaffold0116 (153-258)||(7839-7944)
[»] scaffold0043 (1 HSPs)
scaffold0043 (83-259)||(64344-64520)
[»] scaffold0712 (1 HSPs)
scaffold0712 (72-259)||(4845-5031)
[»] scaffold0709 (1 HSPs)
scaffold0709 (72-259)||(4865-5051)
[»] scaffold0131 (1 HSPs)
scaffold0131 (155-214)||(7873-7932)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-35)||(9230-9264)
[»] scaffold2150 (1 HSPs)
scaffold2150 (1-34)||(859-892)
[»] scaffold0636 (1 HSPs)
scaffold0636 (189-258)||(1541-1610)
[»] scaffold0320 (1 HSPs)
scaffold0320 (2-35)||(199-232)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-34)||(31124-31157)
[»] scaffold0103 (1 HSPs)
scaffold0103 (2-35)||(24627-24660)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-35)||(18283-18316)
[»] scaffold1426 (1 HSPs)
scaffold1426 (2-34)||(643-675)
[»] scaffold0560 (1 HSPs)
scaffold0560 (2-34)||(1832-1864)
[»] scaffold0466 (1 HSPs)
scaffold0466 (2-34)||(10507-10539)
[»] scaffold0407 (1 HSPs)
scaffold0407 (2-34)||(5112-5144)
[»] scaffold0102 (1 HSPs)
scaffold0102 (2-34)||(13014-13046)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-34)||(31183-31215)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-34)||(63950-63982)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-34)||(251279-251311)


Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 42866501 - 42866278
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42866501 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 42866402  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  42866401 ccgagtcatccgagtgattccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatg 42866302  T
Q  235 accgagccgagttttaaaactatg 258  Q
    ||||||||||||||||||||||||    
T  42866301 accgagccgagttttaaaactatg 42866278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 28235019 - 28234799
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28235019 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 28234920  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  28234919 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcaatgacc 28234820  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  28234819 gagccgagttttaaaactatg 28234799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 44257990 - 44257770
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44257990 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 44257891  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  44257890 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcggtggttcgaccattgactcattgacccagtacccccgccgagtcgatgacc 44257791  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  44257790 gagccgagttttaaaactatg 44257770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 36 - 258
Target Start/End: Complemental strand, 3355622 - 3355400
Alignment:
Q  36 tcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaac 135  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  3355622 tcattattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgaattatctaac 3355523  T
Q  136 cgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatga 235  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  3355522 cgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcagtgattcgaccattgacccattgacccagtatccccgccgagtcgatga 3355423  T
Q  236 ccgagccgagttttaaaactatg 258  Q
    ||||||||| |||||||||||||    
T  3355422 ccgagccgaattttaaaactatg 3355400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 35 - 236
Target Start/End: Original strand, 24984048 - 24984249
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24984048 gtcattattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaa 24984147  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||    
T  24984148 ccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactagttcgaccattgacccattgacccagtacccccgccgagtcgatg 24984247  T
Q  235 ac 236  Q
    ||    
T  24984248 ac 24984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 46535157 - 46535370
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46535157 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggtttaataactatataaatttaatctaaggaccgagttatctaaccg 46535256  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||        ||||||||||| ||||||||| ||||||||||||    
T  46535257 agtcatccgaatggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtacccccgccgagtcgatgacc 46535348  T
Q  238 gagccgagttttaaaactatgt 259  Q
    ||||||||||||||||||||||    
T  46535349 gagccgagttttaaaactatgt 46535370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 12792882 - 12792670
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12792882 attattttagtttctaaagtgaccgagtcaccgactcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 12792783  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||||||||||        |||| ||||||||  | ||||||||||    
T  12792782 agtcatccgagtggttctgattcagtcatgcggttcgaccaatgactcggtggttcgaccattga--------cccagtacccccgtcgggtcgatgacc 12792691  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  12792690 gagccgagttttaaaactatg 12792670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 48303086 - 48303298
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48303086 attattttagtttctaaagtgaccgagtcaccgattcaattcgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 48303185  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||| ||| | |||||||||| ||||| || ||||||||||||||||||||||||| ||| |          ||||||||||||||||| |    
T  48303186 agtcatccgagtgattctgattcagtcatgcggttccactaatgactcagtggttcgaccattgatccagt---------accccgctgagtcgatgatc 48303276  T
Q  238 gagccgagttttaaaactatgt 259  Q
    ||||||||||||| ||||||||    
T  48303277 gagccgagttttagaactatgt 48303298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 9293842 - 9293697
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9293842 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 9293743  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgac 183  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  9293742 agtcatccgagtggttccgattcagtcatgcggttcgaccattgac 9293697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 1846797 - 1846998
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1846797 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 1846896  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    |||||| ||||||||| || |||||||||                   ||||||||||||||| ||||||| ||||| |||| |||| |||||||||| |    
T  1846897 agtcattcgagtggtttcgattcagtcat-------------------agtggttcgaccattaacccattaacccagtacctccgccgagtcgatgatc 1846977  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  1846978 gagccgagttttaaaactatg 1846998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 76 - 258
Target Start/End: Complemental strand, 50655628 - 50655447
Alignment:
Q  76 atccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcga 175  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||    
T  50655628 atccgatttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccaagtcatccgagtggttccgattcagtcatgccgttcga 50655529  T
Q  176 ccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
     |||||||| ||||||||||| ||||||||||| | ||||||||||  |  ||| ||||  ||||||||||||||||||||||    
T  50655528 tcaatgacttagtggttcgactattgacccattaatccaataccccacca-agttgatgttcgagccgagttttaaaactatg 50655447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 258 - 394
Target Start/End: Complemental strand, 36839988 - 36839852
Alignment:
Q  258 gtattcaatagatagtttatatctttggtatcttaacatgtgtttaaaaggcaccaatcctaaagnnnnnnnctaattcattgttgttttgtccaaagga 357  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||       ||||||||||||||||||||||||||||    
T  36839988 gtattcaatagatagtttatatctttggtatcttaaaatgtgttttaaaggcaccaatcctaaagaaaaaaactaattcattgttgttttgtccaaagga 36839889  T
Q  358 aattgaaaagaaccataggcttcacaatatttggtaa 394  Q
    |||||||||||||||||||||||||||||||||||||    
T  36839888 aattgaaaagaaccataggcttcacaatatttggtaa 36839852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 4224979 - 4225131
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    |||||| ||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||| | |    
T  4224979 aagtgaacgagtcaccgattaaattcgatttaatccggttaaatagctatataaatttaatctcaagaacgagttatctaaccgagtcatccgagttgat 4225078  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccca 206  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  4225079 ccggttcagttatgcggttcaaccaatgactcagtggttcgaccattgaccca 4225131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 56 - 258
Target Start/End: Complemental strand, 32364323 - 32364121
Alignment:
Q  56 gtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 155  Q
    ||||||||||||||| || ||| ||| |||||  |||||||||  |||| ||||||||||| | |||||||| |||||||||||| |||||  |   |||    
T  32364323 gtgaccgagtcaccggttaaattcgatttaatttggttaaatagttataaaaatttaatcttaagaccgagtcatctaaccgagttatccggtttaatcc 32364224  T
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    | |||||||||| ||||| |||| |||| |||||||||||||||| |||||  ||||||||||||| |  ||||||||||||||||||| ||||||||||    
T  32364223 gattcagtcatgcggttcaaccagtgacccagtggttcgaccattaacccagcgacccaatacccctgtcgagtcgatgaccgagccgaattttaaaact 32364124  T
Q  256 atg 258  Q
    |||    
T  32364123 atg 32364121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 78 - 206
Target Start/End: Original strand, 5384697 - 5384825
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||| ||||||||| | ||||||||||||||| |||||||||    
T  5384697 ccgatttaatccggttaaatagctatataaatttaatctcaagaccgagttatctaactgagccatccgagttgatccggttcagtcatgcggttcgacc 5384796  T
Q  178 aatgactcagtggttcgaccattgaccca 206  Q
    ||| || || | |||||||||||||||||    
T  5384797 aataacccaatagttcgaccattgaccca 5384825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 37034810 - 37034981
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| ||||| || ||||||| |||||||| |||||||| | |||||||||||||||||||||          | ||||||||||||||| |||||||||    
T  37034810 ccgatttaattcgattaaatagctatataagtttaatctcaagaccgagttatctaaccgagtt---------gatccggttcagtcatgcggttcgacc 37034900  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||| |||||||||||||||||||||| | ||||| |||||  || |||||||||| ||||||||||||||||||||||    
T  37034901 aatgacccagtggttcgaccattgacccagtaacccagtacccatgccgagtcgatgatcgagccgagttttaaaactatg 37034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 259
Target Start/End: Original strand, 3014078 - 3014275
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    |||||||| | |||||||||| |||||   |||||||| ||||| ||||||||||| | ||||| || || ||||||||| || ||  |   ||||||||    
T  3014078 cgagtcacgggttcaatccgatttaatatagttaaatacctataaaaatttaatcttaagaccgggtcatttaaccgagttattcggtttaatccggttc 3014177  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||| ||||||| |||||| || |||||||| | |||| ||||||||||||||||||    
T  3014178 agtcatgtggttcaaccaatgactcagtggttcgaccattaatccagtgacccagtacccctgccgagtcgat-aacgagacgagttttaaaactatgt 3014275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 257
Target Start/End: Original strand, 7156139 - 7156333
Alignment:
Q  62 gagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttca 161  Q
    |||||||| |||||||| || |||||||| ||||||| ||||||||||||||||| | ||||||||||||| ||||| |||| | ||| | || ||||||    
T  7156139 gagtcaccaattcaatcagatttaatccgcttaaatatctatataaatttaatctcaagaccgagttatcttaccgaatcattcaagttgatctggttca 7156238  T
Q  162 gtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||||| ||||| ||| ||||  || ||||||||||||||| |||| ||||||  |||||  | ||||| |||  |||||||| ||||||||||||    
T  7156239 gtcatgcggttcaaccgatgatccaatggttcgaccattga-ccatcgacccagcacccctcccgagtcaatggacgagccgaattttaaaactat 7156333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 258
Target Start/End: Original strand, 16914392 - 16914593
Alignment:
Q  57 tgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 156  Q
    |||||||||||||| |||||||||| |||||  | ||||||| | ||  ||||||||| |||  ||||||||||||||| ||||||||||| | | ||||    
T  16914392 tgaccgagtcaccggttcaatccgatttaatatgattaaatacccatgcaaatttaatttaaacaccgagttatctaactgagtcatccgatttgatccg 16914491  T
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
     |||||||||| ||||| |  | |||| ||||||||||||||| |||||| |||||||||  | |    |||||||||  ||||||||||||||||||||    
T  16914492 attcagtcatgcggttcaattagtgacccagtggttcgaccatcgacccagtgacccaatgtctctatcgagtcgatggtcgagccgagttttaaaacta 16914591  T
Q  257 tg 258  Q
    ||    
T  16914592 tg 16914593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 33690264 - 33690159
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| |||| ||||| ||||| ||||| |||||||||||||||||||| ||||| ||||||| |||||| || |||||||||||||||||||||||||||    
T  33690264 tccgattcaatcatgcggttcaaccaacgactcagtggttcgaccattaacccaatgacccagtacccctgccgagtcgatgaccgagccgagttttaaa 33690165  T
Q  253 actatg 258  Q
    ||||||    
T  33690164 actatg 33690159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 44410916 - 44410712
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||| ||||||||  | |||||||||| |||||| |||||| || ||||| | ||||||||| |  ||||||| ||||| |||||| || ||  |   |    
T  44410916 aagtggccgagtcattggttcaatccgatttaatcgggttaattacctataaagatttaatcttaaaaccgagtcatctagccgagttattcggtttaat 44410817  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    | | || ||||||| ||||| |||| ||||||||||||||||||||| ||||| ||||||| |||||  || |||||||||||||| |||||||||||||    
T  44410816 ctgatttagtcatgcggttcaaccagtgactcagtggttcgaccattaacccagtgacccagtacccttgccgagtcgatgaccgaaccgagttttaaaa 44410717  T
Q  254 ctatg 258  Q
    |||||    
T  44410716 ctatg 44410712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 962493 - 962598
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||  ||||||| | ||||   || |||||||||||||||||||||||||||    
T  962493 tccggttcagtcatgtggttcaaccagtgactcagtggttcgaccattaacttattgacctagtacctatgccgagtcgatgaccgagccgagttttaaa 962592  T
Q  253 actatg 258  Q
    ||||||    
T  962593 actatg 962598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 3252331 - 3252226
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||| ||||| |||| |||||||||||||| |||||| || || ||||||| |||| |  | |||||||||||||||||||||||||||    
T  3252331 tccggttcagtcatgcggttcaaccagtgactcagtggttcaaccattaactcagtgacccagtacctctaccgagtcgatgaccgagccgagttttaaa 3252232  T
Q  253 actatg 258  Q
    ||||||    
T  3252231 actatg 3252226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 9293711 - 9293642
Alignment:
Q  189 ggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||    
T  9293711 ggttcgaccattgacccattgacccagtacccccgtcgagtcgatgatcgagccgagttttaaaactatg 9293642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 45193197 - 45193302
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| ||| |||||| |||||||| ||||| ||||||||||||||| ||||||| |||||||  ||||  || |||||||||| ||||||||||||||||    
T  45193197 tccgattcggtcatgcggttcgactaatgattcagtggttcgaccaatgacccagtgacccagcacccttgccgagtcgatgatcgagccgagttttaaa 45193296  T
Q  253 actatg 258  Q
    ||||||    
T  45193297 actatg 45193302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 18032387 - 18032287
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    ||||||||||  |||| |||| ||||||||||||||||||||| || |||||| ||| |||||  || ||||||| ||||||||||||||||||||||||    
T  18032387 ttcagtcatgcagttcaaccagtgactcagtggttcgaccattaactcattgatccagtacccatgccgagtcgacgaccgagccgagttttaaaactat 18032288  T
Q  258 g 258  Q
    |    
T  18032287 g 18032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 3794247 - 3794153
Alignment:
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||| |||       ||||||||||| ||||||||||||||||||    
T  3794247 ggttcagtcatgcggttcaaccaatgactcagtggttcgaccattaacccaatgacccagtac-------gagtcgatgactgagccgagttttaaaact 3794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 20726088 - 20725983
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| ||||||||||  |||| |||| ||| ||||||||||||||||| || |||||||||| || ||  |  |||||||||||||||||||||||||||    
T  20726088 tccgattcagtcatgcagttcaaccagtgagtcagtggttcgaccattaactcattgacccagtatccatgtcgagtcgatgaccgagccgagttttaaa 20725989  T
Q  253 actatg 258  Q
    ||||||    
T  20725988 actatg 20725983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 24638903 - 24638702
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||| |||||||| || |||||||| | ||||||  ||||||||  |||| ||||||||||  | |||||||| | || ||||||| || ||  |   |    
T  24638903 aagtggccgagtcatcggttcaatcctatttaatctagttaaatacatataaaaatttaatcgtaagaccgagtcaacttaccgagttattcggtttaat 24638804  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    || ||||||||||| ||||| |||| |||| ||||   ||||||||| || || ||||||| |||||  || |||||||||||||||| |||||||||||    
T  24638803 ccagttcagtcatgcggttcaaccagtgacccagt---tcgaccattaactcactgacccactacccatgccgagtcgatgaccgagctgagttttaaaa 24638707  T
Q  254 ctatg 258  Q
    |||||    
T  24638706 ctatg 24638702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 41983794 - 41983875
Alignment:
Q  177 caatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||| ||||||||||||| || || |||| || |||||  ||||||| ||||||||||||||||||||||||||||    
T  41983794 caatgactcaatggttcgaccattaactcactgactcagtacccatgctgagttgatgaccgagccgagttttaaaactatg 41983875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 46545483 - 46545424
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgaccca 214  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  46545483 cggttcagtcatgcggttcaaccaatgactcagtggttcgaccaatgactcattgaccca 46545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 49241744 - 49241642
Alignment:
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    ||||||| |||| ||||| ||||| ||||| |||||||||||||| ||||| ||| ||| || ||| |  || |||||||||||||||| ||||||||||    
T  49241744 ggttcagccatgcggttcaaccaacgactcggtggttcgaccattaacccaatgatccagtatccctgtcgaatcgatgaccgagccgaattttaaaact 49241645  T
Q  256 atg 258  Q
    |||    
T  49241644 atg 49241642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 19554196 - 19554297
Alignment:
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    ||||||||||  |||||||||||||| |||||||||||| || |||| || ||| ||| || || | | |||||||| | ||||||||||||||||||||    
T  19554196 gttcagtcatacggttcgaccaatgattcagtggttcgatcaatgactcagtgatccagtaacctcaccgagtcgatcatcgagccgagttttaaaacta 19554295  T
Q  257 tg 258  Q
    ||    
T  19554296 tg 19554297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 11191410 - 11191458
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgac 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11191410 cggttcagtcatgtggttcaaccaatgactcagtggttcgaccaatgac 11191458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 34143629 - 34143554
Alignment:
Q  52 taaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagt 127  Q
    ||||||||  |||||||| |||||||| || |||||||| ||||||| ||||||||||||||||| | ||||||||    
T  34143629 taaagtgattgagtcaccaattcaatcagatttaatccgcttaaatatctatataaatttaatctcaagaccgagt 34143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 20117850 - 20117947
Alignment:
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||| ||||| |||||| ||||| ||||||||||||||||||| |||| || || |||  | |||| ||||||||||||   |||||||||||||    
T  20117850 agtcatgcggttcaaccaataactcaatggttcgaccattgacccaatgactcagtatccctaccgagttgatgaccgagccagtttttaaaactatg 20117947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 40960232 - 40960313
Alignment:
Q  175 accaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    |||| ||| |||||| |||||||||| || | ||||||||||| ||| ||||||||||||||||| | || |||||||||||    
T  40960232 accagtgattcagtgattcgaccattaactcgttgacccaatatccctgctgagtcgatgaccgaactgaattttaaaacta 40960313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 50358969 - 50359066
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||| || ||||| | || || | | |||||||| | ||| |||| ||||||||||    
T  50358969 ttcagtcatgcggttcgaccaatgattcagtggttcgaccaatgactcagtgacctagtaacctcaccgagtcgatcatcgaaccgaattttaaaact 50359066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 43064706 - 43064806
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||| ||||| ||| |||||| | || |||||||||||||||||||||| ||||||||||| |   | |||||||| ||||   ||||||||||||||||    
T  43064706 ttcattcatgcggtacgaccagtaacccagtggttcgaccattgacccaatgacccaatacacttaccgagtcgatcaccggttcgagttttaaaactat 43064805  T
Q  258 g 258  Q
    |    
T  43064806 g 43064806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 258
Target Start/End: Complemental strand, 50323512 - 50323330
Alignment:
Q  76 atccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcga 175  Q
    |||||| | |||||| || |||| | ||| ||||||||| ||  ||| |||| |||||||||||||| |||  |   ||||||||  ||||| |||||||    
T  50323512 atccgattcaatccgatttaataccaatacaaatttaatatagagactgagtcatctaaccgagtcaaccggtttaatccggttctatcatgcggttcga 50323413  T
Q  176 ccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||| ||||  | ||||||||||| | ||||| ||||||| || ||   | |||||||  ||||| ||||||||||||||||||    
T  50323412 ccagtgacctaatggttcgaccaataacccagtgacccagtatccttaccgagtcgacaaccgaaccgagttttaaaactatg 50323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 8256117 - 8256022
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatc 131  Q
    ||||| |||||| ||| |||| ||| ||||||| || |||||||||| ||||||| ||||| || ||||||||||| |||| |  ||||||||||||    
T  8256117 gtcataattttagtttttaaactgatcgagtcagcggttcaatccgatttaatccagttaa-tagctatataaattgaatcaatagaccgagttatc 8256022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 52585253 - 52585217
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtg 189  Q
    ||||||||||||||| |||||||||||||||||||||    
T  52585253 tccggttcagtcatgcggttcgaccaatgactcagtg 52585217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 6739852 - 6739818
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacag 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  6739852 ctatttaattgcttttgggtaacggggtgttacag 6739818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3653480 - 3653513
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  3653480 ctatttaattgcttttgggtaacggggtgttaca 3653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18417460 - 18417427
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  18417460 ctatttaattgcttttgggtaacggggtgttaca 18417427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 31986099 - 31986188
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| ||||||||| ||||||||| |||| ||| ||| |||||||  ||||   | ||||||| |||||  ||||||||||||||||||    
T  31986099 ggttcaaccaatgacccagtggttcaaccaatgaaccagtgacccagcacccttaccgagtcgacgaccggtccgagttttaaaactatg 31986188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41051024 - 41050991
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  41051024 ctatttaattgcttttgggtaacggggtgttaca 41050991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48427195 - 48427162
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  48427195 ctatttaattgcttttgggtaacggggtgttaca 48427162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 19667483 - 19667515
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  19667483 tatttaattgcttttgggtaacggggtgttaca 19667515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 20639692 - 20639660
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  20639692 tatttaattgcttttgggtaacggggtgttaca 20639660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 29152155 - 29152187
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  29152155 tatttaattgcttttgggtaacggggtgttaca 29152187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 45774861 - 45774760
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||| || || | ||||||||| ||    ||| |||| ||||| ||| ||| ||| || || |||||||||| ||| ||||||||||||    
T  45774861 tccggttcagtcatgcggctcaatcaatgactcggt----cgatcattaacccaatgatccagtacacctgccgagtcgatgatcgaaccgagttttaaa 45774766  T
Q  253 actatg 258  Q
    ||||||    
T  45774765 actatg 45774760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 51727159 - 51727119
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcga 195  Q
    ||||||||||||| ||||| |||||||||||| ||||||||    
T  51727159 cggttcagtcatgcggttcaaccaatgactcaatggttcga 51727119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 42063685 - 42063462
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42063685 gtcattattttagtttataaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 42063586  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  42063585 ccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatg 42063486  T
Q  235 accgagccgagttttaaaactatg 258  Q
    ||||||||||||||||||||||||    
T  42063485 accgagccgagttttaaaactatg 42063462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 40485436 - 40485656
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40485436 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 40485535  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  40485536 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcaatgacc 40485635  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  40485636 gagccgagttttaaaactatg 40485656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 41726241 - 41726461
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41726241 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 41726340  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  41726341 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacctccgccgagtcgatgacc 41726440  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  41726441 gagccgagttttaaaactatg 41726461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 19726596 - 19726816
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19726596 attattttagtttctaaagtgaccgagtcactgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 19726695  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  19726696 agtcatctgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 19726795  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  19726796 gagccgagttttaaaactatg 19726816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 38 - 259
Target Start/End: Complemental strand, 30360675 - 30360454
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30360675 attattttagtttctaaagtgatcaagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaacca 30360576  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||| || |||||||||    
T  30360575 agtcatccgagtggttccgattcagtcatgcggttcgaacaatgactcagtggttcgaccattgacccattgacccagtacctccgccgaatcgatgacc 30360476  T
Q  238 gagccgagttttaaaactatgt 259  Q
    ||||||||||||||||||||||    
T  30360475 gagccgagttttaaaactatgt 30360454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 3656077 - 3655857
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3656077 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaagaaccgagttatctaaccg 3655978  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| || |||||| ||||||||||||    
T  3655977 agtcatccgagtggttccgatttagtcatgcggttcgaccaatgactcagtggttcgaccattgatccattgatccagtatccccgccgagtcgatgacc 3655878  T
Q  238 gagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||    
T  3655877 gagccgaattttaaaactatg 3655857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 14910315 - 14910095
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14910315 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataacaatataaatttaatctaaggatcgagttatctaaccg 14910216  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    |||||| |||||||||||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||| ||||||||||||    
T  14910215 agtcattcgagtggttccgatttagtcatgcggttcgaccaatgactcagtggttcgatcattgacccattgatccagtactcccgccgagtcgatgacc 14910116  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  14910115 gagccgagttttaaaactatg 14910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 31008418 - 31008638
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31008418 attattttagtttctaaagtgaccgagtcaccgattcaacacgagttaatccggttaaataactatataaatttaatctaaggactgagttatctaaccg 31008517  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||    
T  31008518 agtcatccgagtggttccgattcaatcatgcggttcgaccaatgactcactggttcgaccattgacccattgactcagtacccccgccgagtcgatgacc 31008617  T
Q  238 gagccgagttttaaaactatg 258  Q
    || |||| |||||||||||||    
T  31008618 gaaccgaattttaaaactatg 31008638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 36658727 - 36658515
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36658727 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 36658628  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||        |||| ||||||| | ||||||||||||    
T  36658627 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattga--------cccagtacccccaccgagtcgatgacc 36658536  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  36658535 gagccgagttttaaaactatg 36658515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 13487033 - 13487252
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13487033 attattttagtttctaaagtgaccgaatcaccgattcaatccgagttaatccggttaaataactatataaatataatctaaggaccgagttatctaaccg 13487132  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| || |||||| || |||||||||    
T  13487133 agtcatccgcgtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgatccattgatccagta-ccccgccgattcgatgacc 13487231  T
Q  238 gagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||    
T  13487232 gagccgaattttaaaactatg 13487252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 38 - 206
Target Start/End: Original strand, 5969886 - 5970054
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5969886 attattttagtttctaaagtgaccgaatcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaaccg 5969985  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccca 206  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  5969986 agtcatccgagtggttccgattcagtcatgcggttcaaccaatgactcaatggttcgaccattgaccca 5970054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 61 - 206
Target Start/End: Complemental strand, 39375311 - 39375166
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||    
T  39375311 cgagtcaccgattaaatccgatttaatccggttaaatagctatataaatttaatctcaagaccgagttatctaaccgagtcatccgagttgatccggttc 39375212  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgaccca 206  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  39375211 agtcatgcggttcgaccaatgactcagtggttcgaccattgaccca 39375166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 18656555 - 18656727
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| |||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  18656555 ccgatttaatccggttagatagctatataaatttaatctcacgaccgagttatctaaccgagtcatccgagttgatccggttcagtcatgcggttcgacc 18656654  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||||||        ||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  18656655 aatgactcagtggttcga--------ccattgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 18656727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 78 - 257
Target Start/End: Original strand, 44056425 - 44056604
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| |||||| ||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||| | ||||||||||||||  |||||||||    
T  44056425 ccgatttaatctggttaaatagctatataaatttaatctcaagaccgagttatctaactgagtcatccgagttgatccggttcagtcatacggttcgacc 44056524  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    ||||||||||||||||||||||||||||| |||  || |||||| || |||||||||| ||||| |||||||||||||||    
T  44056525 aatgactcagtggttcgaccattgacccagtgattcagtacccctgccgagtcgatgatcgagctgagttttaaaactat 44056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 36834067 - 36833904
Alignment:
Q  95 aataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcg 194  Q
    |||| ||||||||||||||||| | || ||||||||||||| ||||||| ||||| | ||||||||||||||| ||||||| |||||| |||||||||||    
T  36834067 aatagctatataaatttaatctcaagatcgagttatctaactgagtcattcgagttgatccggttcagtcatgcggttcgatcaatgattcagtggttcg 36833968  T
Q  195 accattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  36833967 accattgacccaatgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 36833904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 27679187 - 27679359
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||||||    
T  27679187 ccgagttaatccggttaaataactatataaatttaatctaaggatcgagttatctaaccgagtcatccgagtggttccgattcagtcatgcgattcgacc 27679286  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||| | ||||||||||||        ||||||||| | ||||||||| |||||||||||||| |||| ||||||| |||||    
T  27679287 aataattcagtggttcga--------ccattgacctagtacccccgccgagtcgatgaccgaaccgatttttaaacctatg 27679359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 4455278 - 4455450
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| |||||||||||| ||| |||||| |||||||||| |  ||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||    
T  4455278 ccgatttaatccggttagatagctatatgaatttaatctcaataccgagttatctaactgagtcatccgagttgatccggttcagtcatgcggttcgacc 4455377  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||||||        ||| ||||||| |||||| || ||||||||| ||||||| |||||||||||||||    
T  4455378 aatgactcagtggttcga--------ccagtgacccagtacccctgccgagtcgatggccgagccaagttttaaaactatg 4455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 8014919 - 8015024
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| |||||| ||| |||||||||||||||||| ||||||||||||||| ||| ||||| | ||||||||| ||||| |||||||||||||||||||||    
T  8014919 tccgattcagttatgcggttcgaccaatgactcactggttcgaccattgatccagtgacctagtacccccgccgagtcaatgaccgagccgagttttaaa 8015018  T
Q  253 actatg 258  Q
    ||||||    
T  8015019 actatg 8015024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 39024562 - 39024465
Alignment:
Q  89 cggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactca 186  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||| | | ||||||||||||||| ||||||||||||||||||    
T  39024562 cggttaaatagctatataaatttaatctcaagaccgagttatctaaccaagtcatccgaattgatccggttcagtcatgcggttcgaccaatgactca 39024465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 106 - 249
Target Start/End: Original strand, 28761632 - 28761775
Alignment:
Q  106 aaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccc 205  Q
    ||||||||||| | |||||||| | |||||||||| |||||  |   |||| |||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  28761632 aaatttaatcttaagaccgagtcacctaaccgagttatccggtttaatccgattcagtcatgcggttcaaccagtgactcagtggttcgaccattgaccc 28761731  T
Q  206 attgacccaatacccccgctgagtcgatgaccgagccgagtttt 249  Q
    | | ||||| |||||| || ||||||||||||||||||| ||||    
T  28761732 aataacccagtacccctgccgagtcgatgaccgagccgaatttt 28761775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 32493185 - 32493288
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaac 254  Q
    ||||||||||||| ||||| ||||||||  |||||||||||||||| || || |||||||||||||  || |||||||||||||||||||||||||||||    
T  32493185 cggttcagtcatgcggttcaaccaatgatccagtggttcgaccattaactcactgacccaatacccatgccgagtcgatgaccgagccgagttttaaaac 32493284  T
Q  255 tatg 258  Q
    ||||    
T  32493285 tatg 32493288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 12639248 - 12639407
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    ||||| |||||| ||| |||||||||||||||||||||||||| ||          |||||||| ||||||||||||||||| |  ||||| ||||||||    
T  12639248 gtcataattttagtttttaaagtgaccgagtcaccgattcaatacg----------gttaaatacctatataaatttaatctcaaaaccgaattatctaa 12639337  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacc 204  Q
     |||||||||| | | | || |||| ||||||| ||||| |||||||||||| |||||| ||||||||||    
T  12639338 tcgagtcatccaaattgatctggttaagtcatgcggttcaaccaatgactcaatggttcaaccattgacc 12639407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 6545788 - 6545699
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagcc 242  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||| |||| ||| ||||||||    
T  6545788 tccggttcagttatgcggttcgaccaatgactcgctggttcgaccattgacccagtgacccagtacccccgccgagttgataaccgagcc 6545699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 259
Target Start/End: Complemental strand, 29867852 - 29867727
Alignment:
Q  134 accgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgat 233  Q
    |||||||||||||| |   ||||||||||||||| ||||| |||| ||||||| |||||| |||| ||||||| ||||||| || || | | | ||| ||    
T  29867852 accgagtcatccgatttaatccggttcagtcatgcggttcaaccagtgactcactggttcaaccaatgacccaatgacccagtaacctcaccgtgtcaat 29867753  T
Q  234 gaccgagccgagttttaaaactatgt 259  Q
    | ||| ||||||||||||||||||||    
T  29867752 gtccgggccgagttttaaaactatgt 29867727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 11031135 - 11031029
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||  ||||| ||||| ||||||||| |   |||||||||||||||||| ||||||| || |||| | |||| ||||||||  ||||||||||||    
T  11031135 tccggttctatcatgcggttcaaccaatgacccgacggttcgaccattgacccagtgacccagtatccccaccgagttgatgaccggtccgagttttaaa 11031036  T
Q  253 actatgt 259  Q
    |||||||    
T  11031035 actatgt 11031029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 597338 - 597234
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||| | ||||| || ||||||||||||||||||||||| || || ||| ||| | ||||  | ||||||||||| ||||||| |||||||    
T  597338 tccggttcagtcacgcggttcaac-aatgactcagtggttcgaccattaactcaatgatccagtgcccctaccgagtcgatgactgagccgaattttaaa 597240  T
Q  253 actatg 258  Q
    ||||||    
T  597239 actatg 597234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 1916563 - 1916344
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||| |  |||||||||||||||| |||||| ||| |||||| | ||||||| ||||| |||||||||||||  | | | |||||| |  |    
T  1916563 attattttagtttttggagtgaccgagtcaccggttcaattcgatttaatctgattaaatatctatacaaatttaatctaaacatcaaattatcttattg 1916464  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    |||||||||  | | ||||||||| ||||| ||||  |||||| ||    |||||||| ||| ||| || |||| || |||| | |  ||||||||||||    
T  1916463 agtcatccggtttgatccggttcaatcatgcggttaaaccaataacctgatggttcgaacatcgactcagtgactcagtacctctgtcgagtcgatgacc 1916364  T
Q  238 gagccgagttttaaaactatg 258  Q
    || ||||| ||||||||||||    
T  1916363 gaaccgag-tttaaaactatg 1916344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 40337656 - 40337561
Alignment:
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| ||| ||| || || | | ||||||||| |||   |||||||||||||||||    
T  40337656 tcatgcggttcgaccaatgacttagtggttcgaccaatgacccagtgatccactatcctcaccgagtcgatggccggttcgagttttaaaactatg 40337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 20821794 - 20821899
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| ||||| ||   ||||||||||||||||||||| ||||| |||| || || ||  || ||||||||| || |||| |||||||||    
T  20821794 tccggttcagttatgcggttcaacaggtgactcagtggttcgaccattaacccagtgactcagtatccttgccgagtcgatggccaagccaagttttaaa 20821893  T
Q  253 actatg 258  Q
    ||||||    
T  20821894 actatg 20821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 26403638 - 26403727
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| |||| |||||||||||||| |||||| || || |||| || ||||||    |||||||||||| ||||||||||||||| ||||    
T  26403638 ggttcaaccagtgactcagtggttcaaccattaactcaatgacacagtacccctatcgagtcgatgaccaagccgagttttaaaattatg 26403727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 31893204 - 31893265
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgaccca 214  Q
    ||||||||||||||| ||||| |||| ||||||||||||| ||||  |||| ||||||||||    
T  31893204 tccggttcagtcatgcggttcaaccagtgactcagtggtttgaccgatgactcattgaccca 31893265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 16088465 - 16088434
Alignment:
Q  229 tcgatgaccgagccgagttttaaaactatgta 260  Q
    ||||||||||||||||||||||||||||||||    
T  16088465 tcgatgaccgagccgagttttaaaactatgta 16088434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 43487523 - 43487594
Alignment:
Q  188 tggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    ||||||||| |||||| || |||| |||||||| | | ||||||||||| |  |||||||||||||||||||    
T  43487523 tggttcgactattgactcagtgactcaataccctcaccgagtcgatgactggtccgagttttaaaactatgt 43487594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33799198 - 33799232
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacag 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  33799198 ctatttaattgcttttgggtaacggggtgttacag 33799232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 39533962 - 39533900
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    |||| ||||| |||||  ||||||||| |||||||||||||||||| || |||| ||||||||    
T  39533962 ttcaatcatgcggttcacccaatgacttagtggttcgaccattgactcagtgactcaataccc 39533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14737617 - 14737650
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  14737617 ctatttaattgcttttgggtaacggggtgttaca 14737650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 26486815 - 26486848
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  26486815 tatttaattgcttttgggtaacggggtgttacag 26486848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35540384 - 35540351
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  35540384 ctatttaattgcttttgggtaacggggtgttaca 35540351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 21981413 - 21981445
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  21981413 tatttaattgcttttgggtaacggggtgttaca 21981445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 21986332 - 21986364
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  21986332 tatttaattgcttttgggtaacggggtgttaca 21986364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22003540 - 22003572
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  22003540 tatttaattgcttttgggtaacggggtgttaca 22003572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 23225541 - 23225573
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  23225541 tatttaattgcttttgggtaacggggtgttaca 23225573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 36823421 - 36823545
Alignment:
Q  134 accgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgat 233  Q
    |||||||||||||| |   ||||||||  ||||| ||||| |||| |||| || |||||| |||| | || || ||||||| || || | | ||||| ||    
T  36823421 accgagtcatccgatttaatccggttccatcatgcggttcaaccagtgacccaatggttcaaccaataactcagtgacccagtaacctcaccgagtcaat 36823520  T
Q  234 gaccgagccgagttttaaaactatg 258  Q
    |||||  ||||||||||||||||||    
T  36823521 gaccggtccgagttttaaaactatg 36823545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41242953 - 41242985
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  41242953 tatttaattgcttttgggtaacggggtgttaca 41242985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 36099571 - 36099791
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36099571 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 36099670  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  36099671 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcaatgacc 36099770  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  36099771 gagccgagttttaaaactatg 36099791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 36858353 - 36858133
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36858353 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactgtataaatttaatctaaggaccgagttatctaaccg 36858254  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  36858253 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtatccccgccgagtcgatgacc 36858154  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  36858153 gagccgagttttaaaactatg 36858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 11734125 - 11734345
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11734125 attattttagtttttaaaatgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 11734224  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  11734225 agttatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 11734324  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  11734325 gagccgagttttaaaactatg 11734345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 29983455 - 29983235
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29983455 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 29983356  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  29983355 agtcatctgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccaccgagtcgatgacc 29983256  T
Q  238 gagccgagttttaaaactatg 258  Q
    || ||||||||||||||||||    
T  29983255 gaaccgagttttaaaactatg 29983235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 35 - 258
Target Start/End: Original strand, 44605812 - 44606035
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44605812 gtcattattttagtttctaaagtgaccgagtcgccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatcaaa 44605911  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||    
T  44605912 ccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcagtggttcaaccattgacccattgacccagtaccccggccgagtcgatg 44606011  T
Q  235 accgagccgagttttaaaactatg 258  Q
    |||||||||| |||||||||||||    
T  44606012 accgagccgaattttaaaactatg 44606035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 16216911 - 16217108
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||| | ||||||||    
T  16216911 cgagtcacctattaaatccgatttaatccggttaaataactatataaatttaatctcaagactgagttatctaaccgagtcatccgagttgatccggttc 16217010  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16217011 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccagtgacccaatacccatgctgagtcgatgaccgagccgagttttaaaactatg 16217108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 10198504 - 10198308
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||| | ||||||||    
T  10198504 cgagtcaccgattaaatccgatttaatccagttaaatagctatataaatttaatctcaagatcgagttatctaaccgagtcatccgagttgatccggttc 10198405  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||    
T  10198404 agtcatgcggttcgaccaatgactcagtggttcgaccattgacccagtgatccaatacccctgccgagtcgatgaccgagccgagttttaaaactat 10198308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 47423667 - 47423453
Alignment:
Q  38 attattttaatttctaaagtgaccg--agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaac 135  Q
    ||||||||| |||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47423667 attattttagtttctaaagtgatcgcgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaac 47423568  T
Q  136 cgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatga 235  Q
    ||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||        |||| ||||||||| || ||||| |    
T  47423567 cgaatcatctgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattga--------cccagtacccccgccgaatcgataa 47423476  T
Q  236 ccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||||    
T  47423475 ccgagccgagttttaaaactatg 47423453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 24096628 - 24096823
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||||||||||| | || |||||||||||||||||||| |||||| | || |||||||    
T  24096628 agtcaccgattaaatccgatttaatccggttaaatagttatataaatttaatctcaagatcgagttatctaaccgagtcacccgagttgatctggttcag 24096727  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
     |||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||| || || ||||||||||| ||||||||||||||||||    
T  24096728 acatgcggttcgaccaatgactcagtggttcgaccattgatccagtgacccagtacccctgccgaatcgatgaccgaaccgagttttaaaactatg 24096823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 85 - 256
Target Start/End: Original strand, 33628189 - 33628360
Alignment:
Q  85 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgact 184  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||| | ||||||| ||||||| |||||||||||||||     
T  33628189 aatccggttaaatagctatataaatttaatctcaagaccgagttatccaaccgagtcatccgagttgatccggtttagtcatgcggttcgaccaatgacc 33628288  T
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    || |||||| |||||||||||| |||| || |||||| || ||||| ||| |||||||||||||||||||||    
T  33628289 caatggttcaaccattgacccagtgactcagtacccctgccgagtcaatgtccgagccgagttttaaaacta 33628360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 35 - 258
Target Start/End: Original strand, 20131233 - 20131456
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||| ||||  ||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | |||||| ||||||||    
T  20131233 gtcatttttttcgtttttaaagtgactgagtcaccgattcaatccgatttaatccggttaaatagctatataaatttaatcttaagaccgaattatctaa 20131332  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    | ||||||||||||| | ||||||| ||||||| || |||| ||||||| || || ||  |||||||||||| |||| ||||| ||| || || || |||    
T  20131333 ctgagtcatccgagttgatccggtttagtcatgcggatcgatcaatgacccaatgatttaaccattgacccagtgactcaataaccctgccgaatcaatg 20131432  T
Q  235 accgagccgagttttaaaactatg 258  Q
     ||||  |||||||||||||||||    
T  20131433 tccgaatcgagttttaaaactatg 20131456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 35 - 258
Target Start/End: Original strand, 16198589 - 16198811
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||| ||||||| ||| || | |||||||||||||| |||||||||| |||||  | ||||||||||||  |||||||||||||  ||||| ||||||||    
T  16198589 gtcactattttagtttttagattgaccgagtcaccggttcaatccgatttaatatgattaaataactatgcaaatttaatctaaacaccgaattatctaa 16198688  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||| | | |||| ||||| |||| ||||| |||| |||| ||||||||||| ||| |||||| |||||||||||| |  | |||||||||    
T  16198689 ccgagtcatccgatttgatccgtttcagccatgcggttcaaccagtgacccagtggttcga-catcgacccagtgacccaatacctctaccgagtcgatg 16198787  T
Q  235 accgagccgagttttaaaactatg 258  Q
     |||||||||||||||||||||||    
T  16198788 gccgagccgagttttaaaactatg 16198811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 14801875 - 14801974
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  14801875 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggataaataactatatacatttaatctaaggaccgagttatctaaccg 14801974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 15248867 - 15248966
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15248867 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggataaataactatatacatttaatctaaggaccgagttatctaaccg 15248966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 258
Target Start/End: Complemental strand, 46170828 - 46170641
Alignment:
Q  71 attcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtgg 170  Q
    |||||||||||  ||||| |||| ||||  |||| ||||||||||| | | |||||| |||||||||||| || ||  | | ||||||||| ||||| ||    
T  46170828 attcaatccgatctaatctggttcaatacatataaaaatttaatcttaaggccgagtcatctaaccgagttattcggtttgatccggttcattcatgcgg 46170729  T
Q  171 ttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||| |  ||| || ||||||||||||||||||| |||||||||||||    
T  46170728 ttcgaccattgactcagtggttcgaccattaacccaatgacccagtgtccctgccgagtcgatgaccgagccgaattttaaaactatg 46170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 9822624 - 9822519
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||||| || ||||||| ||||||||||||||||    
T  9822624 tccggttcagttatgcggttcgaccaatgactcactggttcgaccattgactcagtgacccaatacccccgccgaatcgatgatcgagccgagttttaaa 9822525  T
Q  253 actatg 258  Q
    ||||||    
T  9822524 actatg 9822519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 10724549 - 10724444
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||||| || ||||||| ||||||||||||||||    
T  10724549 tccggttcagttatgcggttcgaccaatgactcactggttcgaccattgactcagtgacccaatacccccgccgaatcgatgatcgagccgagttttaaa 10724450  T
Q  253 actatg 258  Q
    ||||||    
T  10724449 actatg 10724444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 14801974 - 14802063
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  14801974 ggttcgaccaatgactcaatggttcgaccattgacccattgacctagtacccccgccgagtcgatgaccgagccgagttttaaaactatg 14802063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 15248966 - 15249055
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  15248966 ggttcgaccaatgactcaatggttcgaccattgacccattgacctagtacccccgccgagtcgatgaccgagccgagttttaaaactatg 15249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 45269448 - 45269553
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||    
T  45269448 tccgattcagttatgcggttcgaccaatgactcactggttcgaccattgacccagtgacccagtacctccgccgagtcgatgaccgagccgagttttaaa 45269547  T
Q  253 actatg 258  Q
    ||||||    
T  45269548 actatg 45269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 1582277 - 1582155
Alignment:
Q  136 cgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatga 235  Q
    |||||||||||| |   |||| |||||||||| ||||| | ||||||||||  ||||||||||||||| |||||||||| | | || |||||||||||||    
T  1582277 cgagtcatccgatttaatccgattcagtcatgcggttcaatcaatgactcaacggttcgaccattgactcattgacccagtgcacctgctgagtcgatga 1582178  T
Q  236 ccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||||    
T  1582177 ccgagccgagttttaaaactatg 1582155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 34259179 - 34259377
Alignment:
Q  60 ccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggtt 159  Q
    |||||||| || ||| ||||||  ||||| ||||||||| ||||| ||||||||| | |  || | || || | ||||||| |||||| |   | || ||    
T  34259179 ccgagtcatcggttcgatccgatctaatctggttaaatacctataaaaatttaatattaacactgggtcatatgaccgagttatccgatttaattcgatt 34259278  T
Q  160 cagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||| ||||| |||| ||||||||||||||||||||| || |||||||| |||||||  || ||||||| |||||||||||||||||||||||||    
T  34259279 cagtcatgcggttcaaccagtgactcagtggttcgaccattaactcattgacctaatacccatgccgagtcgacgaccgagccgagttttaaaactatg 34259377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 258
Target Start/End: Original strand, 34191802 - 34192006
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||| |||||||| || |||||||||| ||||||  ||||||||  |||| ||| ||||||| |  |||| || ||||| |||||| ||  |  |   |    
T  34191802 aagtggccgagtcatcggttcaatccgatttaatctagttaaatacttataaaaaattaatcttaaaaccgggtcatctagccgagttatttggtttaat 34191901  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    ||| || ||||||| ||||| |||||||||||||||||||||||||  ||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  34191902 ccgatttagtcatgcggttcaaccaatgactcagtggttcgaccatcaacccagtgatccagtacccctgcagagtcgatcaccgagccgagttttaaaa 34192001  T
Q  254 ctatg 258  Q
    |||||    
T  34192002 ctatg 34192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 259
Target Start/End: Complemental strand, 31813686 - 31813487
Alignment:
Q  60 ccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggtt 159  Q
    ||||||||||  |||||||| | |||||  ||||||||| ||||| |||||||| || | |||||  | |||||||||||| || ||  |   | || ||    
T  31813686 ccgagtcaccagttcaatccaatttaatatggttaaatacctataaaaatttaaccttaagaccggatcatctaaccgagttattcggtttaattcgatt 31813587  T
Q  160 cagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    || |||||   ||| |||| ||||||||||||||||||||| ||||||||| ||| |||||| || ||||||||||||||| ||||||||||||||||||    
T  31813586 caatcatgcaattcaaccactgactcagtggttcgaccattaacccattgaaccagtacccctgccgagtcgatgaccgagtcgagttttaaaactatgt 31813487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 10992621 - 10992819
Alignment:
Q  60 ccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggtt 159  Q
    |||||||| || ||| ||||||  ||||| ||||||||| ||||| ||||||||| | |  |||| || || | ||||||| |||||  |   |||| ||    
T  10992621 ccgagtcatcggttcgatccgatctaatctggttaaatacctataaaaatttaatattaacaccgggtcatatgaccgagttatccggtttaatccgatt 10992720  T
Q  160 cagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||  |||| |||| ||||| ||||||||||||||| || |||||||||| |||||| || ||||||| | |||||||||||||||||||||||    
T  10992721 cagtcatgcagttcaaccagtgacttagtggttcgaccattaactcattgacccagtacccctgccgagtcgacggccgagccgagttttaaaactatg 10992819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 5418986 - 5418899
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    ||||| |||| ||||||||||||||||||||| ||||||| ||||| |||| | || |||||||||||||||||||||||||||||||    
T  5418986 ggttcaaccagtgactcagtggttcgaccattaacccattaacccagtacctctgccgagtcgatgaccgagccgagttttaaaacta 5418899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 30801772 - 30801677
Alignment:
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| |||||||||   ||||||||||||| |||| ||| ||| |||||||||||| |  | || ||||||| ||||||||||||||||||||||    
T  30801772 tcatgcggttcgacctgcgactcagtggttcaaccaatgatccaatgacccaatacctctcccgaatcgatgatcgagccgagttttaaaactatg 30801677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 25069401 - 25069344
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacc 212  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||  ||||||||    
T  25069401 cggttcagtcatgcggttcaaccaatgactcagtggttcgaccaatgattcattgacc 25069344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 8419900 - 8420032
Alignment:
Q  88 ccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcag 187  Q
    |||||| |||| | ||| ||||||||| ||   |||||||||||||||||| ||||||   |   |||||||   ||||| |||||||||| |||| ||     
T  8419900 ccggtttaataccaatacaaatttaatatagataccgagttatctaaccgaatcatccagtttaatccggtttcatcatgcggttcgaccagtgacccaa 8419999  T
Q  188 tggttcgaccattgacccattgacccaataccc 220  Q
    ||||||||||| ||||||| |||||||||||||    
T  8420000 tggttcgaccaatgacccagtgacccaataccc 8420032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 33610690 - 33610590
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||||||||| ||||| |||||||||||||||||||||||||| || || ||||  | |||||   | |||| |||||| |||| || ||||||||||||    
T  33610690 ttcagtcatgcggttcaaccaatgactcagtggttcgaccattaactcagtgacttagtacccttacagagttgatgactgagcagaattttaaaactat 33610591  T
Q  258 g 258  Q
    |    
T  33610590 g 33610590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 31958642 - 31958737
Alignment:
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||||| || ||||  |||   || |||||||| ||||| |||| |||||||||||||    
T  31958642 tcatgcggttcgaccagtgactcaatggttcgaccaatgacccagtggcccagaaccttagccgagtcgatcaccgatccgatttttaaaactatg 31958737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 45498934 - 45498883
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccca 206  Q
    ||||||||||||  ||||||| |||||||||| |||||||||||||||||||    
T  45498934 cggttcagtcattcggttcgatcaatgactcaatggttcgaccattgaccca 45498883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 17833767 - 17833666
Alignment:
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    |||||||||||| || || ||||| ||||||||||||||| |||| ||| | ||| ||| ||||||    |||||||||||||  |||| ||||||||||    
T  17833767 ggttcagtcatgcggctcaaccaacgactcagtggttcgatcattaacctaatga-ccagtacccctatcgagtcgatgaccgtaccgaattttaaaact 17833669  T
Q  256 atg 258  Q
    |||    
T  17833668 atg 17833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 40685594 - 40685628
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacag 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  40685594 ctatttaattgcttttgggtaacggggtgttacag 40685628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 749185 - 749152
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  749185 ctatttaattgcttttgggtaacggggtgttaca 749152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11878402 - 11878369
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  11878402 ctatttaattgcttttgggtaacggggtgttaca 11878369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 18194988 - 18195021
Alignment:
Q  225 tgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| ||||||||||||||||||||||||||||    
T  18194988 tgagttgatgaccgagccgagttttaaaactatg 18195021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 20623246 - 20623149
Alignment:
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||| ||||| ||||||||| ||||| ||||||||||||| || |||||| |  |||   | |||||||||||||  |||  |||||||||||||    
T  20623246 agtcatgcggttcaaccaatgacccagtgattcgaccattgactcagtgacccgacgcccttaccgagtcgatgaccggtccggtttttaaaactatg 20623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30603653 - 30603686
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  30603653 ctatttaattgcttttgggtaacggggtgttaca 30603686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39050200 - 39050167
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  39050200 ctatttaattgcttttgggtaacggggtgttaca 39050167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48988760 - 48988793
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  48988760 ctatttaattgcttttgggtaacggggtgttaca 48988793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13964822 - 13964854
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  13964822 tatttaattgcttttgggtaacggggtgttaca 13964854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 15630811 - 15630779
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  15630811 tatttaattgcttttgggtaacggggtgttaca 15630779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 15811469 - 15811437
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  15811469 tatttaattgcttttgggtaacggggtgttaca 15811437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32626731 - 32626699
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttac 33  Q
    |||||||||||||||||||||||||||| ||||    
T  32626731 ctatttaattgcttttgggtaacggggtgttac 32626699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 37284544 - 37284512
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  37284544 tatttaattgcttttgggtaacggggtgttaca 37284512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 46649122 - 46649090
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  46649122 tatttaattgcttttgggtaacggggtgttaca 46649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49149240 - 49149204
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacagtc 37  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  49149240 ctatttaattacttttgggtaacggggtgttacagtc 49149204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 24068080 - 24068300
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24068080 attattttagtttctaaagtgaccgagtcaccaattcaatccgagttaatccggttaaataactatataaatttaatctaagcaccgagttatctaaccg 24068179  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24068180 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgccgagtcgatgacc 24068279  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  24068280 gagccgagttttaaaactatg 24068300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 21289773 - 21289551
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21289773 gtcattattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaa 21289674  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||    
T  21289673 ccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcgaccattgacccattgacccagta-ccccgccgagtcgatg 21289575  T
Q  235 accgagccgagttttaaaactatg 258  Q
    |||||||||||| | |||||||||    
T  21289574 accgagccgagtatgaaaactatg 21289551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 30269803 - 30269593
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  30269803 attattttagtttctaaagtgaccgagtcaccgattcaatccg----------gttaaataactatataaatttaatctaaggaccgagttatctaaccg 30269714  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| || |||||||||| ||||||||| ||||||||||||    
T  30269713 agtcatccgagtggttccgattcagtcatgcggttcgaccaacgactcagtggttcgaccattaactcattgacccagtacccccgccgagtcgatgacc 30269614  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  30269613 gagccgagttttaaaactatg 30269593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 22351135 - 22351347
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22351135 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttattccggttaaataactatataaatttaatctaaggactgagttatctaaccg 22351234  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||        ||||||||||| || |||||| ||||||||||||    
T  22351235 agtcatccgagtggttctgattaagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtatccccgccgagtcgatgacc 22351326  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  22351327 gagccgagttttaaaactatg 22351347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 35 - 256
Target Start/End: Original strand, 31513254 - 31513474
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||  | | |||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||||| | ||||||| |||| ||    
T  31513254 gtcattattttcgtgtttaaagtgaccgagtcaccgattcaatccgatttaatc-ggttaaatagctatttaaatttaatctcaagaccgagatatccaa 31513352  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||||||||| || |||||| ||||||||||||||||| || ||||||  | ||||| |||    
T  31513353 ccgagtcatccgagttgatccggtttagtcatgcggttcgaccaatgacccaatggttcaaccattgacccattgactcagtaccccttccgagtcaatg 31513452  T
Q  235 accgagccgagttttaaaacta 256  Q
     |||||||||||||||||||||    
T  31513453 tccgagccgagttttaaaacta 31513474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 8464477 - 8464281
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||||| ||| ||| ||| |||||| ||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||| | | || |||||    
T  8464477 cgagtcaccaattaaattcgatttaatc-ggttaaatagctatataaatttaatctcaagaccgagttatctaacagagtcatccgaattgatctggttc 8464379  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||| | ||||||||||||||| || || ||||||| |||  | || |||  |||||||||||||| |||||||||||||    
T  8464378 agtcatgcggttcgaccaatgatttagtggttcgaccattaactcagtgacccagtacatctgccgagctgatgaccgagccgaattttaaaactatg 8464281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 78 - 258
Target Start/End: Complemental strand, 13630375 - 13630203
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||  ||||||||    
T  13630375 ccgagttaatccggttaaataattatataaatttaatctaaagaccgagttatctaaccgagtcattcgagtagttccggatcagtcatgcagttcgacc 13630276  T
Q  178 -aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
     ||||||| |||||||||||||||||| || |          |||||| |||||||||||||||||||||||||||| ||||    
T  13630275 aaatgactaagtggttcgaccattgactcagt---------accccgccgagtcgatgaccgagccgagttttaaaaatatg 13630203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 23595895 - 23595691
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||| |||||||| || |||||||||| ||||||  ||||||||  |||| ||| ||||||| |  |||| || ||||| |||||| ||  |  |   |    
T  23595895 aagtggccgagtcatcggttcaatccgatttaatctagttaaatacttataaaaaattaatcttaaaaccgggtcatctagccgagttatttggtttaat 23595796  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    ||| || | ||||| ||||| |||||||||||||||||||||||||  ||||| ||||||| |||||| || |||||||| |||||||||||||||||||    
T  23595795 ccgatttaatcatgcggttcaaccaatgactcagtggttcgaccatcaacccagtgacccagtacccctgccgagtcgatcaccgagccgagttttaaaa 23595696  T
Q  254 ctatg 258  Q
    |||||    
T  23595695 ctatg 23595691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 31504628 - 31504751
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||  | | |||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||||| | ||||||| |||| ||    
T  31504628 gtcattattttcgtgtttaaagtgaccgagtcaccgattcaatccgatttaatc-ggttaaatagctatttaaatttaatctcaagaccgagatatccaa 31504726  T
Q  135 ccgagtcatccgagtggttccggtt 159  Q
    |||||| |||||||| | |||||||    
T  31504727 ccgagtaatccgagttgatccggtt 31504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 6817379 - 6817290
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| |||| ||||||||||||||||||||| ||||| ||||||| |||||   | |||||||||||||||||||||||||||||||||    
T  6817379 ggttcaaccagtgactcagtggttcgaccattaacccaatgacccagtacccttaccgagtcgatgaccgagccgagttttaaaactatg 6817290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 258
Target Start/End: Original strand, 29419720 - 29419863
Alignment:
Q  106 aaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccc 205  Q
    ||||||||||| | |||||||| | |||||||||| |||||  |  | ||| |||||||||| ||||| |||| ||||||||||||| ||||||          
T  29419720 aaatttaatcttaagaccgagtcacctaaccgagttatccgtttaat-ccgattcagtcatgcggttcaaccagtgactcagtggtttgaccat------ 29419812  T
Q  206 attgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
      ||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  29419813 --tgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 29419863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 21528807 - 21528944
Alignment:
Q  121 accgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    ||||||| || |||||||||||||||| |   |||| |||||||||| |||||||||| |||| ||||| ||  |||| ||||||  ||||||| |||||    
T  21528807 accgagtcatataaccgagtcatccgattcaatccgattcagtcatgcggttcgaccagtgacccagtgattgaaccaatgaccctgtgacccagtaccc 21528906  T
Q  221 ccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
       | |||||||| ||||  ||||||||||||||||||    
T  21528907 tgaccgagtcgatcaccggtccgagttttaaaactatg 21528944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 30426418 - 30426317
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||| ||||| ||||| |||| ||||| ||||||||||||||| ||  ||||| ||| |||||   | ||||||||||||||||||| ||||||||||||    
T  30426418 ttcaatcatgcggttcaaccagtgacttagtggttcgaccattaacttattgatccagtaccctgtccgagtcgatgaccgagccgaattttaaaactat 30426319  T
Q  258 gt 259  Q
    ||    
T  30426318 gt 30426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 34779971 - 34780025
Alignment:
Q  204 ccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||    
T  34779971 ccattgacccagtacccccgccgagtcaatgacagagccgagttttaaaactatg 34780025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 11465426 - 11465359
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    |||| |||||||||| |||||||||| |||  || ||||||||||| |||| |||||||||| |||||    
T  11465426 tccgattcagtcatgcggttcgaccagtgatccaatggttcgaccaatgactcattgacccagtaccc 11465359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 16224482 - 16224516
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacag 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  16224482 ctatttaattgcttttgggtaacggggtgttacag 16224516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 95302 - 95335
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  95302 tatttaattgcttttgggtaacggggtgttacag 95335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33874122 - 33874089
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  33874122 ctatttaattgcttttgggtaacggggtgttaca 33874089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 14617012 - 14617044
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  14617012 tatttaattgcttttgggtaacggggtgttaca 14617044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19448716 - 19448684
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  19448716 tatttaattgcttttgggtaacggggtgttaca 19448684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19450710 - 19450678
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  19450710 tatttaattgcttttgggtaacggggtgttaca 19450678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19457097 - 19457065
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  19457097 tatttaattgcttttgggtaacggggtgttaca 19457065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19467242 - 19467210
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  19467242 tatttaattgcttttgggtaacggggtgttaca 19467210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 30800246 - 30800278
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  30800246 tatttaattgcttttgggtaacggggtgttaca 30800278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 30464969 - 30465189
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30464969 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 30465068  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  30465069 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 30465168  T
Q  238 gagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||    
T  30465169 gagccgaattttaaaactatg 30465189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 23241745 - 23241965
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23241745 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttattctaaggaccgagttatctaaccg 23241844  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23241845 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgattcagtggttcgaccattgacccattgacccaatacccccgccgagtcgatgacc 23241944  T
Q  238 gagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||    
T  23241945 gagccgaattttaaaactatg 23241965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 39850915 - 39850695
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39850915 attattttagtttctaaagtgactgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 39850816  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  39850815 agtcatccgagtggttccgattcaatcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacctagtacccccgccgagtcgatgacc 39850716  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  39850715 gagccgagttttaaaactatg 39850695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 33635103 - 33634883
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33635103 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatctggttaaataactatataaatttaatctaaggaccgagttatctaaccg 33635004  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    |||||||||||| |||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |    
T  33635003 agtcatccgagttgttccgattctatcatgcggttcgaccaatgactcagtggttcgaccattgacccattaacccagtacccccgccgagtcgatgatc 33634904  T
Q  238 gagccgagttttaaaactatg 258  Q
    || ||||||||||||||||||    
T  33634903 gaaccgagttttaaaactatg 33634883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 29025492 - 29025259
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccg----------gttaaataactatataaatttaatctaaggaccg 124  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||          |||| |||||||||||||||||||||||||||||    
T  29025492 gtcattattttagtttataaagtgaccgagtcaccgattcaatccgagttaatccgagttaatccggttatataactatataaatttaatctaaggaccg 29025393  T
Q  125 agttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  29025392 agttatctaaccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcaaccattgacccattgacccagtacccccgc 29025293  T
Q  225 tgagtcgatgaccgagccgagttttaaaactatg 258  Q
     |||||||||||||||| ||||||||||||||||    
T  29025292 cgagtcgatgaccgagctgagttttaaaactatg 29025259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 2849148 - 2849367
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||||||||||||||||||||  || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  2849148 attattttagtttctaaagtgaccgagtcaccgattcaataagagttaatccaattaaataactatataaatttaatctaaggaccgagttatctaaccg 2849247  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||| ||||||||||||| ||  ||| | ||||||||||||    
T  2849248 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcaatgattcgaccattaacccattgacccagta-tcccaccgagtcgatgacc 2849346  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  2849347 gagccgagttttaaaactatg 2849367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 26725763 - 26725552
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26725763 attattttagtttctaaagtgac-gaatcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 26725665  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||        ||||||||||||||  | |||||||||    
T  26725664 agtcatccgagtggttctgattcagtcatgcggttcgaccaataactcagtggttcgaccattga--------cccaatacccccgccaaatcgatgacc 26725573  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  26725572 gagccgagttttaaaactatg 26725552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 56 - 261
Target Start/End: Original strand, 55257998 - 55258190
Alignment:
Q  56 gtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 155  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||    
T  55257998 gtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccg-------------agtcatccgagtggttcc 55258084  T
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  55258085 gattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccaccgagtcgatgaccgagccgagttttaaaact 55258184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 37599769 - 37599976
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||              
T  37599769 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggactgagt---------- 37599858  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
       ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  37599859 ---catccgagtggttacgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgatccattgacccagtacccccgccaagtcgatgacc 37599955  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  37599956 gagccgagttttaaaactatg 37599976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 44832626 - 44832412
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| ||| ||||||| |||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44832626 gtcattattttagtttttaaagtggccgactcaccaatttaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 44832527  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||        |||| ||| ||||  |||||||||    
T  44832526 ccgagttatccgagtggttccggttcagtcatgcggttcgaccaatgactcggtggttcgaccattga--------cccagtactcccgtcgagtcgatg 44832435  T
Q  235 accgagccgagttttaaaactat 257  Q
    |||||||||| ||||||||||||    
T  44832434 accgagccgaattttaaaactat 44832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 10259097 - 10259297
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10259097 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgaattatctaaccg 10259196  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||                    ||||||| ||||||||||||| ||||||||| ||||||||||||    
T  10259197 agtcatccgagtggttccgattcagtcatgcggttc--------------------gaccattaacccattgacccagtacccccgccgagtcgatgacc 10259276  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  10259277 gagccgagttttaaaactatg 10259297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 11335545 - 11335709
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11335545 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataagaatataaatttaatctaaggaccgagttatctaaccg 11335644  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattga 202  Q
    | ||||||||||| ||| | |||||||||| ||||||  ||||||||||||||||||||| ||||    
T  11335645 aatcatccgagtgattctgattcagtcatgcggttcgttcaatgactcagtggttcgaccgttga 11335709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 85 - 258
Target Start/End: Original strand, 33987149 - 33987322
Alignment:
Q  85 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgact 184  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||| ||||||||||||||||    
T  33987149 aatccgattaaataactatataaatttaatctaagaaccgagttatctaaccgagtcattcgagtggtttcgattcagtcatgcggttcgaccaatgact 33987248  T
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| ||| ||||||||| |||||| ||| || |||| | ||||| |||||| || |||||||||||||||||    
T  33987249 cagtgattcaaccattgactcattgatccagtaaccccaccgagtcaatgaccaagtcgagttttaaaactatg 33987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 11676143 - 11676261
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  11676143 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatttaaggaccgagttatctaaacg 11676242  T
Q  138 agtcatccgagtggttccg 156  Q
    |||||||||||||||||||    
T  11676243 agtcatccgagtggttccg 11676261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 56 - 258
Target Start/End: Original strand, 51537090 - 51537292
Alignment:
Q  56 gtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 155  Q
    ||||||||||||||| |||||| ||| |||||| |||||||||  |||| ||||||||||| | |||||||| |||||||||||| |||||  |   |||    
T  51537090 gtgaccgagtcaccggttcaattcgatttaatctggttaaatagttataaaaatttaatcttaagaccgagtcatctaaccgagttatccggtttaatcc 51537189  T
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    | ||||| |||| ||||| |||| |||| |||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||||    
T  51537190 gattcagacatgcggttcaaccagtgacccagtggttcgaccattaacccagtgacccaatacccctgccgagtcgatgaccgagccgagttttaaaact 51537289  T
Q  256 atg 258  Q
    |||    
T  51537290 atg 51537292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 63 - 265
Target Start/End: Complemental strand, 29727932 - 29727730
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    |||||||| |||||| ||| ||||||  |||||||| ||||| ||||||||||| | |||||||| ||||||| |||| |||||  |   |||| |||||    
T  29727932 agtcaccggttcaattcgatttaatctagttaaatagctataaaaatttaatcttaagaccgagtcatctaactgagttatccggtttaatccgattcag 29727833  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgtatt 262  Q
    ||||| ||||| || | |||||||||||||| |||||| ||||| |||||||||||||| || || |||||||||||||||||||||||||||||| |||    
T  29727832 tcatgcggttcaactagtgactcagtggttcaaccattaacccaatgacccaatacccctgccgaatcgatgaccgagccgagttttaaaactatgaatt 29727733  T
Q  263 caa 265  Q
    |||    
T  29727732 caa 29727730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 258
Target Start/End: Complemental strand, 45096485 - 45096288
Alignment:
Q  62 gagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttca 161  Q
    |||||||| |||||||| || |||| ||| ||||||| ||||||||||||||||| | |||||| |||||| || ||||||||||||| | ||||||| |    
T  45096485 gagtcaccaattcaatcagatttaacccgcttaaatatctatataaatttaatctcaagaccgatttatcttactgagtcatccgagttgatccggttaa 45096386  T
Q  162 gtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaat-acccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||| ||| ||||  || |||||||||||||||||||| |||||| | |||||  | ||||| ||| |||||||||||||||||||||||    
T  45096385 gtcatgtggttcaaccgatgatccaatggttcgaccattgacccatcgacccagtaacccctcccgagtcaatggccgagccgagttttaaaactatg 45096288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 52404273 - 52404445
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| ||||| || ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||| | ||||| |||||||||    
T  52404273 ccgatttaatacgattaaatagctatataaatttaatctcaagaccgagttatctaaccgagtcatccgagttgatccggtttaatcatgcggttcgacc 52404372  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||| ||||||||||||| | |||| |||||      |||||||||| |||| |||||||||||||||||    
T  52404373 aatgactcagtggtttgaccattgacccagt-accc-atacc------gagtcgatgatcgaggcgagttttaaaactatg 52404445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 45158655 - 45158515
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    ||||| ||||| ||||||| || ||||| |||||||  |||||||||||||||| | |||||||||||||||||||| |||| |||| | ||||||||||    
T  45158655 agtcatcgattaaatccgattttatccgattaaatagttatataaatttaatctcaagaccgagttatctaaccgagccatctgagttgatccggttcag 45158556  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgac 203  Q
    ||||| ||||||||||||||||| ||||||| |||||||||    
T  45158555 tcatgcggttcgaccaatgactcggtggttcaaccattgac 45158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 53351276 - 53351171
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| |||||| ||| | ||||||| |||||| || |||||||||||||||||||||||||||    
T  53351276 tccggttcagtcatgcggttcaaccaacgactcagtggttcaaccattaacctaatgacccagtacccctgccgagtcgatgaccgagccgagttttaaa 53351177  T
Q  253 actatg 258  Q
    ||||||    
T  53351176 actatg 53351171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 258
Target Start/End: Original strand, 42217060 - 42217264
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||||||||||||  | |||||||||| |||||| |||||| || ||||| | ||| ||||| |  ||||||| ||||| |||||| || ||  |   |    
T  42217060 aagtgaccgagtcattggttcaatccgatttaatcgggttaattacctataaatattaaatcttaaaaccgagtcatctagccgagttattcggtttaat 42217159  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    ||| |||||||||| ||||| |||| ||||||||||||||||||||| || || ||||||| ||||    | ||||||||||||||||||||||||||||    
T  42217160 ccgattcagtcatgcggttcaaccagtgactcagtggttcgaccattaactcaatgacccagtacctttaccgagtcgatgaccgagccgagttttaaaa 42217259  T
Q  254 ctatg 258  Q
    |||||    
T  42217260 ctatg 42217264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 258
Target Start/End: Complemental strand, 42907985 - 42907769
Alignment:
Q  40 tattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatc-taaggaccgagttatctaaccga 138  Q
    ||||||||||| ||| |||  ||||||| || |||||||||| ||||||  ||||||||  || | ||| |||||| ||||  |||||| ||||||||||    
T  42907985 tattttaatttttaa-gtggtcgagtcatcggttcaatccgatttaatctagttaaatacttaaaaaaagttaatcctaag--ccgagtcatctaaccga 42907889  T
Q  139 gtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccg 238  Q
    || || ||  |   ||||||||||||||| ||||| |||||||||||||||||||||||||| ||| | ||||||| | |||| || |||||||  ||||    
T  42907888 gtaatacggtttaatccggttcagtcatgcggttcaaccaatgactcagtggttcgaccattaacctaatgacccagtgcccctgccgagtcgacaaccg 42907789  T
Q  239 agccgagttttaaaactatg 258  Q
    ||||||||||||||||||||    
T  42907788 agccgagttttaaaactatg 42907769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 256
Target Start/End: Complemental strand, 5123927 - 5123764
Alignment:
Q  85 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgact 184  Q
    ||||| |||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||| | ||| ||||| ||||| ||||| ||||||||||    
T  5123927 aatccagttaaatacctatataaatttaatctcaagagcgagttatctaaccgagtcatccgagttgatccagttcattcatgcggttcaaccaatgact 5123828  T
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    || ||||||        ||||| |||| || |||||| || ||||| ||| |||| ||||||||||||||||    
T  5123827 caatggttc--------acccagtgactcagtacccctgccgagtcaatggccgaaccgagttttaaaacta 5123764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 11412513 - 11412594
Alignment:
Q  176 ccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||  || ||||||||||||||||||||||||||||||||    
T  11412513 ccaatgactcagtggttcgaccaatgacccagtgacccaatacccttgccgagtcgatgaccgagccgagttttaaaactat 11412594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 15100808 - 15100604
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||||||||||||  | |||||||||| |||||| |||||| || ||||| | ||||||||| |  ||||||| || || |||||| || ||  |   |    
T  15100808 aagtgaccgagtcattggttcaatccgatttaatcgggttaattacctataaagatttaatcttaaaaccgagtcatttagccgagttattcggtttaat 15100709  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    ||| |||||||||| ||||| | || ||||||||||||||||||||| ||||| |||||||||| ||     |||||||||| |||||||||||||||||    
T  15100708 ccgattcagtcatgcggttcaatcagtgactcagtggttcgaccattaacccaatgacccaatatccttatcgagtcgatgatcgagccgagttttaaaa 15100609  T
Q  254 ctatg 258  Q
    |||||    
T  15100608 ctatg 15100604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 56 - 258
Target Start/End: Complemental strand, 11575196 - 11574994
Alignment:
Q  56 gtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttcc 155  Q
    ||||||||||||| | |||||||||| ||||||   ||||||| ||||| |||||||||||||  |||  ||||| | |||||||||||||  | | |||    
T  11575196 gtgaccgagtcactggttcaatccgatttaatctcattaaatacctatacaaatttaatctaaacacctggttattttaccgagtcatccggtttgatcc 11575097  T
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    | |||||||| | ||||| ||||||||| |  |||||||||||| ||  || ||||||| ||||   || |||||||||| |||| ||||||||||||||    
T  11575096 gattcagtcacgcggttcaaccaatgacccgatggttcgaccatcgattcaatgacccagtacctatgccgagtcgatgatcgagtcgagttttaaaact 11574997  T
Q  256 atg 258  Q
    |||    
T  11574996 atg 11574994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 41462237 - 41462457
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||| |  |||||||||||||||| |||||||||| |||||  |  ||||||  |||| ||||||||| |||  |||||||||||| ||||    
T  41462237 attattttagtttttggagtgaccgagtcaccggttcaatccgatttaatttgaataaatacttatacaaatttaatttaaacaccgagttatcttaccg 41462336  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    | |||||||  |   || | |||||||||| ||||| || | |||| |  |||||||||||| ||| || ||||||| ||||   |  ||||||||||||    
T  41462337 aatcatccggtttaatcagattcagtcatgcggttcaacaagtgacccgatggttcgaccatcgactcagtgacccagtacctatgtcgagtcgatgacc 41462436  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  41462437 gagccgagttttaaaactatg 41462457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 35054709 - 35054812
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaac 254  Q
    ||||||||||||| ||||| |||| |||| || ||||||||||||| || || ||||||| |||||  || |||||||||||||||||||||||||||||    
T  35054709 cggttcagtcatgcggttcaaccagtgacccaatggttcgaccattaactcactgacccagtacccatgccgagtcgatgaccgagccgagttttaaaac 35054808  T
Q  255 tatg 258  Q
    ||||    
T  35054809 tatg 35054812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 11018809 - 11018705
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| |||||||||||||||||| ||||| ||  ||||| ||| ||||||| ||||||  | |||||||||||||||||||||||||||    
T  11018809 tccggttcagttatgcggttcgaccaatgactcactggtttgattattgatccagtgacccagtaccccacc-gagtcgatgaccgagccgagttttaaa 11018711  T
Q  253 actatg 258  Q
    ||||||    
T  11018710 actatg 11018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 11676262 - 11676334
Alignment:
Q  186 agtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||    
T  11676262 agtggttcgaccattgacccattgacccagtacccc-gccgagtcgatgaccgagccaagttttaaaactatgt 11676334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 258
Target Start/End: Complemental strand, 27002686 - 27002522
Alignment:
Q  85 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgact 184  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||||         || |||||| | ||||||| ||||||   |||||| ||||||      
T  27002686 aatccggttaaatagctatataaatttaatctcaagaccgagttatc---------caaccgagttgatccggtttagtcatacagttcgatcaatgatc 27002596  T
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    || | |||| |||||||||||| |||| || |||||  || ||||| ||| |||||||||||||||||||||||    
T  27002595 caatagttcaaccattgacccagtgactcagtacccttgccgagtcaatgtccgagccgagttttaaaactatg 27002522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 6101918 - 6102021
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| |||||||||| |||||||||| ||||||| ||||||||||| |||| |||||||||| ||||| | | |||||||| || |  |||||| |||||    
T  6101918 tccgattcagtcatgcggttcgaccagtgactcaatggttcgaccaatgactcattgacccagtaccctcaccgagtcgatcactggtccgagtcttaaa 6102017  T
Q  253 acta 256  Q
    ||||    
T  6102018 acta 6102021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 219
Target Start/End: Original strand, 50007206 - 50007358
Alignment:
Q  67 accgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcat 166  Q
    |||| |||||||||| |||||| | |||||||  | || ||||||||| |||  |||||||||||| |||||||||||||  | | |||| |||||||||    
T  50007206 accggttcaatccgatttaatctgattaaatacttgtacaaatttaatttaaacaccgagttatcttaccgagtcatccggtttgatccgattcagtcat 50007305  T
Q  167 gtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacc 219  Q
    | ||||| |||| | || |  |||||||||||| ||| || ||||||| ||||    
T  50007306 gcggttcaaccagtaacccgatggttcgaccatcgactcagtgacccagtacc 50007358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 51229476 - 51229613
Alignment:
Q  121 accgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    ||||||| || |||||||||||||||| |   |||| |||||||||| |||||||||| |||  ||||| ||  |||| ||||||  ||||||| |||||    
T  51229476 accgagtcatataaccgagtcatccgattcaatccgattcagtcatgcggttcgaccagtgatccagtgtttgaaccaatgaccctgtgacccagtaccc 51229575  T
Q  221 ccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
       | |||||||| ||||  ||||||||||||||||||    
T  51229576 tgaccgagtcgatcaccggtccgagttttaaaactatg 51229613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 44201294 - 44201210
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccga 147  Q
    |||||||  |||||||||| |||||  | ||||||| ||||| |||||||||||||  |||  ||||||||||||||||||||||    
T  44201294 agtcaccagttcaatccgatttaatttgattaaatacctatacaaatttaatctaaacaccaggttatctaaccgagtcatccga 44201210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 33897542 - 33897591
Alignment:
Q  209 gacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||| ||||||||  |||||||||||||||||||||||||||||| ||||    
T  33897542 gacctaataccccttctgagtcgatgaccgagccgagttttaaaattatg 33897591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 44201141 - 44201109
Alignment:
Q  226 gagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||||||||||||||    
T  44201141 gagtcgatgaccgagccgagttttaaaactatg 44201109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 45104126 - 45104214
Alignment:
Q  170 gttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||| ||| |   | || ||||| ||||  ||||||||||||||||||    
T  45104126 gttcgaccagtgatccagtggttcgaccattgacccagtgacccagtactcttaccgattcgatcaccggtccgagttttaaaactatg 45104214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 53724133 - 53724061
Alignment:
Q  186 agtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||| || |||||||||| ||||   |  ||| |||||||| ||||||||||||||||||||    
T  53724133 agtggttcgaccattaactcattgacccagtaccgtggtcgaggcgatgaccaagccgagttttaaaactatg 53724061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 28752057 - 28752022
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacagt 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  28752057 ctatttaattgcttttgggtaacggggtgttacagt 28752022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21152291 - 21152324
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  21152291 ctatttaattgcttttgggtaacggggtgttaca 21152324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 21635404 - 21635437
Alignment:
Q  226 gagtcgatgaccgagccgagttttaaaactatgt 259  Q
    ||||||||||||||||||| ||||||||||||||    
T  21635404 gagtcgatgaccgagccgatttttaaaactatgt 21635437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23866616 - 23866649
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  23866616 ctatttaattgcttttgggtaacggggtgttaca 23866649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28758224 - 28758191
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  28758224 ctatttaattgcttttgggtaacggggtgttaca 28758191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29492810 - 29492777
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  29492810 ctatttaattgcttttgggtaacggggtgttaca 29492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 9772726 - 9772758
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  9772726 tatttaattgcttttgggtaacggggtgttaca 9772758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 10767071 - 10767039
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  10767071 tatttaattgcttttgggtaacggggtgttaca 10767039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12356754 - 12356786
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  12356754 tatttaattgcttttgggtaacggggtgttaca 12356786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 54834019 - 54834051
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  54834019 tatttaattgcttttgggtaacggggtgttaca 54834051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 17513240 - 17513020
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17513240 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 17513141  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  17513140 agtcatccgagtggttccgatttagtcatgcagttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 17513041  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  17513040 gagccgagttttaaaactatg 17513020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 24128973 - 24128753
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24128973 attattttagtttctaaagggaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggacctagttatctaaccg 24128874  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  24128873 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgattcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 24128774  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  24128773 gagccgagttttaaaactatg 24128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 7153656 - 7153437
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7153656 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 7153557  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |  |||||||||| ||||||||  ||||||||||||    
T  7153556 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccatt-aatcattgacccagtacccccgtcgagtcgatgacc 7153458  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  7153457 gagccgagttttaaaactatg 7153437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 39061812 - 39062024
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39061812 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 39061911  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||    
T  39061912 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccaatacccccgccgagtcgatgacc 39062003  T
Q  238 gagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||    
T  39062004 gagccgaattttaaaactatg 39062024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 37314825 - 37315037
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37314825 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 37314924  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||        ||||||||||| ||||||||| || |||||||||    
T  37314925 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtacccccgccgaatcgatgacc 37315016  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  37315017 gagccgagttttaaaactatg 37315037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 38 - 259
Target Start/End: Complemental strand, 39678524 - 39678303
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39678524 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccagttaaataactatataaatttaatctaaggaccgagttatctaaccg 39678425  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| |||| | || |||||||||||     
T  39678424 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtgattcgaccattgactcattgacccagtacctctgccgagtcgatgaca 39678325  T
Q  238 gagccgagttttaaaactatgt 259  Q
    ||  ||| ||||||||||||||    
T  39678324 gaatcgaattttaaaactatgt 39678303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 29523774 - 29523986
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29523774 attattttagtttctaaagtgaccgagtcaccgattcaatttgagttaatccgattaaataactatataaatttaatctaaggaccgagttatctaaccg 29523873  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||        ||||||||||| ||||||||| ||||||||||||    
T  29523874 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcga--------ccattgacccagtacccccgccgagtcgatgacc 29523965  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  29523966 gagccgagttttaaaactatg 29523986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 23293088 - 23293289
Alignment:
Q  58 gaccgagtca-ccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 156  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23293088 gaccgagtcatccgatttaatccgagttaatccggttaaataactatgtaaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 23293187  T
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
     |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||    
T  23293188 attcagtcatgcggttcgaccaatgactcagtggttcgaccattcacccattgacccagtaccctcgccgagtcaatgaccgagccgagttttaaaacta 23293287  T
Q  257 tg 258  Q
    ||    
T  23293288 tg 23293289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 31900625 - 31900414
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  31900625 attattttagtttctatagtgatcgagtcaccgattcaatccgagttaatccgattaaataactatataaatttaatctaaggaccaagttatctaaccg 31900526  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||        |||| ||||||||| || |||||||||    
T  31900525 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattga--------cccagtacccccgccgaatcgatgacc 31900434  T
Q  238 gagccgagttttaaaactat 257  Q
    ||||||| ||||||||||||    
T  31900433 gagccgaattttaaaactat 31900414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 55 - 258
Target Start/End: Original strand, 35305196 - 35305399
Alignment:
Q  55 agtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttc 154  Q
    ||||| || |||||||||| ||||||| ||||| |||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||    
T  35305196 agtgaacgtgtcaccgattaaatccgatttaattcggttagatagctatataaatttaatctcaagaccgagttatctaaccgagtcatccgagttgatc 35305295  T
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaac 254  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||    
T  35305296 cggttcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccagtgacccagtacccctgccgagtcgatgaccgagccgagttttaaaac 35305395  T
Q  255 tatg 258  Q
    ||||    
T  35305396 tatg 35305399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 78 - 256
Target Start/End: Complemental strand, 14885471 - 14885301
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||     
T  14885471 ccgagttaatccggttaaataactatataaatttaatctaaggactgagttatttaaccgagtcatccgagtggttccggttcagtcatgcggttcgact 14885372  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    |||||||||||||||||||||||||        ||||||| |||||| || |||||||||||| |||||||||||||||    
T  14885371 aatgactcagtggttcgaccattga--------cccaatatccccgccgaatcgatgaccgagtcgagttttaaaacta 14885301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 16106623 - 16106818
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    ||||||||| ||||| ||| ||||||  |||||||| ||||| ||||||||||| | || ||||| |||||||||||| ||| |  |   |||| |||||    
T  16106623 agtcaccgagtcaattcgatttaatctagttaaatagctataaaaatttaatcttaagatcgagtcatctaaccgagttatctggtttaatccgattcag 16106722  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| ||||| |||| ||||||||||||||||||||| ||||| ||||||||||| |  || |||||||||||||||||||||||||||||||||    
T  16106723 tcatgcggttcaaccagtgactcagtggttcgaccattaacccagtgacccaatactcttgccgagtcgatgaccgagccgagttttaaaactatg 16106818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 19882044 - 19881939
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||| ||||| |||||||||||||||||||||    
T  19882044 tccggttcagttatgcggttcgaccaatgactcactggttcgaccattgaccaagtgacccagtacccccgccgagtcaatgaccgagccgagttttaaa 19881945  T
Q  253 actatg 258  Q
    ||||||    
T  19881944 actatg 19881939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 258
Target Start/End: Complemental strand, 3988829 - 3988705
Alignment:
Q  134 accgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgat 233  Q
    |||||||||||||||| | ||||||||||||||| ||||| ||||||||| || || |||||||||||||||| ||||||| || ||| || ||||| ||    
T  3988829 accgagtcatccgagttgatccggttcagtcatgcggttcaaccaatgacccaatgattcgaccattgacccaatgacccagtatccctgccgagtcaat 3988730  T
Q  234 gaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||||||    
T  3988729 gaccgagccgagttttaaaactatg 3988705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 259
Target Start/End: Original strand, 39761758 - 39761963
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||| | | ||||||||||||||||||| |||||| | | |    
T  39761758 aagtgatcgagtcaccgattcaatccgatttaatccggttaaatagctacataaatataatctcaaggccgagttatctaaccgagttatccgaattgat 39761857  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    ||  ||  || |||   ||||||||||||||||||||||||||||||  |||| ||||| |||||  |    || || |||||||| |||| ||||||||    
T  39761858 ccaattttgtaatgcatttcgaccaatgactcagtggttcgaccattatcccaatgacctaatacgtctatcgaatcaatgaccgaaccgaattttaaaa 39761957  T
Q  254 ctatgt 259  Q
    ||||||    
T  39761958 ctatgt 39761963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 32878717 - 32878817
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||  |||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  32878717 ttcagttatgcggttcgaccaatgactcattggttcgaccattgacccagggacccagtacccccgccgagtcgacgaccgagccgagttttaaaactat 32878816  T
Q  258 g 258  Q
    |    
T  32878817 g 32878817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 21800619 - 21800786
Alignment:
Q  91 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtgg 190  Q
    |||||||| ||||| | ||||||||| | |||||||| || ||||||||| |||||| |   |||| ||||||||||  |||| |||| |||| |||||     
T  21800619 gttaaatacctataaatatttaatcttaagaccgagtcatttaaccgagttatccgatttaatccgattcagtcatgcagttcaaccagtgacccagtga 21800718  T
Q  191 ttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||| ||||||  ||||||  | |||||||||||||||||||||||||||||||||    
T  21800719 ttcgaccattgacccagtgacccggtacccctaccgagtcgatgaccgagccgagttttaaaactatg 21800786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 267
Target Start/End: Complemental strand, 27905847 - 27905613
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaata-act-atataaatttaatctaaggaccgagttatct 132  Q
    |||| ||||||| ||| || | |||||||||||||| |||||||||| ||||   | ||||||| ||| ||  |||||||||||||  ||||||||||||    
T  27905847 gtcactattttagtttttagattgaccgagtcaccggttcaatccgatttaacatgattaaatatacttatgaaaatttaatctaaacaccgagttatct 27905748  T
Q  133 aaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcga 232  Q
    ||||||||||||||| | | || | |||||||||  ||||| ||| ||||| |||||||||||||||  ||||| ||||||||| || |  | |||||||    
T  27905747 aaccgagtcatccgatttgatctgattcagtcatacggttcaaccgatgacccagtggttcgaccatctacccagtgacccaatgcctctaccgagtcga 27905648  T
Q  233 tgaccgagccgagttttaaaactatgtattcaata 267  Q
    || || ||||| ||||||||||||||  |||||||    
T  27905647 tggccaagccgtgttttaaaactatgatttcaata 27905613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 29781639 - 29781415
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| ||| |  |||||||||||||||| |||||||||| |||||| | ||||||| ||||| ||||||||| |||  ||||| |||| |||    
T  29781639 gtcattattttagtttttggagtgaccgagtcaccggttcaatccgatttaatctgattaaatacctatacaaatttaatataaacaccgaattatttaa 29781540  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
     |||||||||||  |   |||| ||||| |||| ||||| |||| |||| |  || ||||||||| ||| || | | |||||  | | || ||||||| |    
T  29781539 tcgagtcatccggtttaatccgattcagccatgcggttcaaccagtgacccgatgattcgaccatcgactcaattatccaatgtctctgccgagtcgaag 29781440  T
Q  235 accgagccgagttttaaaactatgt 259  Q
    |||||||||||||||||||||||||    
T  29781439 accgagccgagttttaaaactatgt 29781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 23251074 - 23250969
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    |||| |||||| ||| |||||||||||||||||  ||||||||||||||| ||| ||||||| ||||||||  ||||||||||| |||| ||||||||||    
T  23251074 tccgattcagttatgcggttcgaccaatgactcgctggttcgaccattgatccagtgacccagtacccccgtcgagtcgatgactgagctgagttttaaa 23250975  T
Q  253 actatg 258  Q
    ||||||    
T  23250974 actatg 23250969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 258
Target Start/End: Original strand, 6065410 - 6065614
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||| |||||||| || |||||||||| |||||| | ||||||| ||||| ||| ||| ||| | | || ||| ||| |||||||| || ||  |   |    
T  6065410 aagtggccgagtcatcggttcaatccgatttaatctgattaaatacctataaaaaattattcttaaggccaagtcatcaaaccgagttattcggtttaat 6065509  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    | | |||||||||| ||||| ||||||||| |||||||||||||||| ||||| |||| || |||||| || || ||||||||||  |||||||||||||    
T  6065510 ctgattcagtcatgcggttcaaccaatgacccagtggttcgaccattaacccagtgactcagtacccctgccgaatcgatgaccggaccgagttttaaaa 6065609  T
Q  254 ctatg 258  Q
    |||||    
T  6065610 ctatg 6065614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 10810561 - 10810661
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||||||||| ||||| ||| ||||| ||||||||||| |||| ||||||||||||| ||||   || |||||||||| |||||||||||||||||||||    
T  10810561 ttcagtcatgcggttcaaccgatgacccagtggttcgatcattaacccattgacccagtaccgttgccgagtcgatgatcgagccgagttttaaaactat 10810660  T
Q  258 g 258  Q
    |    
T  10810661 g 10810661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 18540753 - 18540658
Alignment:
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||   |||||||||||||||||| ||||||| ||| ||| ||||||  | |||||||||| ||||||||||||||||||||||    
T  18540753 tcatgtggttcgacctgcgactcagtggttcgaccagtgacccaatgatccagtaccccttccgagtcgatgatcgagccgagttttaaaactatg 18540658  T

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Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 22315189 - 22315294
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||| ||||||||||| |||| ||||| |||||||||||||||||| |  ||||| | ||| || || ||||| ||||||||| |||||||||||    
T  22315189 tccggttcaatcatgtggttcaaccagtgactgagtggttcgaccattgactcggtgacctagtacacctgccgagtcaatgaccgagacgagttttaaa 22315288  T
Q  253 actatg 258  Q
    ||||||    
T  22315289 actatg 22315294  T

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Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 258
Target Start/End: Complemental strand, 37484576 - 37484403
Alignment:
Q  85 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgact 184  Q
    ||||||||| |||| | ||| ||||||||| ||  |||||||| ||||||||||||||||||  |   ||| ||||  ||||| |||||||||| |||||    
T  37484576 aatccggtttaataccaatacaaatttaatatagagaccgagtcatctaaccgagtcatccggtttaatccagttccatcatgcggttcgaccagtgact 37484477  T
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    || |||||||| || | ||||| ||||||| || ||   | |||||||  ||||||||||||||||||||||||    
T  37484476 caatggttcgatcaataacccaatgacccagtatccttaccgagtcgacaaccgagccgagttttaaaactatg 37484403  T

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Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 16457751 - 16457851
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||||| ||| | ||| |||| ||| |||||||||| |||||| || ||||||||||||||||  || || |||||||||||||||||||||||||||||    
T  16457751 ttcagttatgcgattcaaccagtgattcagtggttccaccattaactcattgacccaatacccatgccgaatcgatgaccgagccgagttttaaaactat 16457850  T
Q  258 g 258  Q
    |    
T  16457851 g 16457851  T

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Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 258
Target Start/End: Complemental strand, 7501516 - 7501379
Alignment:
Q  121 accgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    ||||||| || |||||||||||||||| |   |||| |||||||||| |||||||||| |||  ||||| ||  |||| ||||||  ||||||| |||||    
T  7501516 accgagtcatataaccgagtcatccgattcaatccgattcagtcatgcggttcgaccagtgatccagtgtttgaaccaatgaccctgtgacccagtaccc 7501417  T
Q  221 ccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
       | |||||||| ||||  ||||||||||||||||||    
T  7501416 tgaccgagtcgatcaccggtccgagttttaaaactatg 7501379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 12365511 - 12365636
Alignment:
Q  133 aaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcga 232  Q
    ||||||||||||||  |  | |||||||||||||| ||||| |||| |||| |||||||||||||| | | ||| ||||||| |||||   | || ||||    
T  12365511 aaccgagtcatccggtttatcccggttcagtcatgcggttcaaccagtgacccagtggttcgaccaataaaccagtgacccagtaccctaaccgaatcga 12365610  T
Q  233 tgaccgagccgagttttaaaactatg 258  Q
     |||||  ||||||||||||||||||    
T  12365611 cgaccggtccgagttttaaaactatg 12365636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 37255988 - 37256088
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||| ||||| ||||| ||||| |||||| ||||||||||||||| ||||||| ||| | || |  | |||||||||||||| |||  ||||||||||||    
T  37255988 ttcaatcatgcggttcaaccaacgactcaatggttcgaccattgaaccattgatccagtgcctctaccgagtcgatgaccgaaccggtttttaaaactat 37256087  T
Q  258 g 258  Q
    |    
T  37256088 g 37256088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 20907209 - 20907131
Alignment:
Q  120 gaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgacca 198  Q
    ||||||||| |  ||||||||||||||| |  |||| || |||||||| ||||| |||||||||||| |||||||||||    
T  20907209 gaccgagttgtacaaccgagtcatccgatttattccagtccagtcatgcggttctaccaatgactcaatggttcgacca 20907131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 30963007 - 30963102
Alignment:
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| ||||| |||| ||| || ||||||||||||||||| || || | ||||||||   | |||||||| ||||  ||||||||||||||||||    
T  30963007 tcatgcggttcaaccagtgattcggtggttcgaccattgactcagtgtctcaatacccttaccgagtcgattaccggtccgagttttaaaactatg 30963102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 21614874 - 21614948
Alignment:
Q  184 tcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||| ||| ||| || | ||||| |||  |||||||||||||||| || |||||||||| ||||    
T  21614874 tcagtggttcgaccaatgatccaatgtctcaatatcccttctgagtcgatgaccgaacctagttttaaaattatg 21614948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4076755 - 4076722
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  4076755 ctatttaattgcttttgggtaacggggtgttaca 4076722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11361093 - 11361126
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  11361093 ctatttaattgcttttgggtaacggggtgttaca 11361126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 16106546 - 16106623
Alignment:
Q  56 gtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatcta 133  Q
    |||| ||||||||||| ||||| ||| ||||||  |||||||| ||||| ||||||||||| | || ||||| |||||    
T  16106546 gtgatcgagtcaccgagtcaattcgatttaatctagttaaatagctataaaaatttaatcttaagatcgagtcatcta 16106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28926795 - 28926762
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  28926795 ctatttaattgcttttgggtaacggggtgttaca 28926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 35244795 - 35244828
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  35244795 tatttaattgcttttgggtaacggggtgttacag 35244828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36985381 - 36985414
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  36985381 ctatttaattgcttttgggtaacggggtgttaca 36985414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 37032776 - 37032913
Alignment:
Q  121 accgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    |||||||||||| | |||||||||||| |   || | ||||||||||  |||| |||| ||| ||||||||||||||| ||| ||| |||||| ||  ||    
T  37032776 accgagttatcttaacgagtcatccgatttaatctgattcagtcatgcagttcaaccagtgattcagtggttcgaccaatgaaccagtgacccgatgacc 37032875  T
Q  221 ccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
       | |||||||||||||  |||  |||||||||||||    
T  37032876 ttaccgagtcgatgaccggtccggtttttaaaactatg 37032913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 37254832 - 37254937
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||  ||||| ||||| |||| |||| || |||||| |||| |||| || ||||||| || || | | ||||| |||||||  ||||||||||||    
T  37254832 tccggttctatcatgcggttcaaccagtgacccaatggttcaaccaatgactcagtgacccagtaacctcaccgagtcaatgaccggtccgagttttaaa 37254931  T
Q  253 actatg 258  Q
    ||||||    
T  37254932 actatg 37254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42552498 - 42552465
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  42552498 ctatttaattgcttttgggtaacggggtgttaca 42552465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33386 - 33354
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  33386 tatttaattgcttttgggtaacggggtgttaca 33354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 1060993 - 1060957
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacagtca 38  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  1060993 tattttattgcttttgggtaacggggtgttacagtca 1060957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 12941 - 12721
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941 attattttagtttctaaagtgaccgagtcaccgatttaatccaagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 12842  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  12841 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgacc 12742  T
Q  238 gagccgagttttaaaactatg 258  Q
    ||| |||||||||||||||||    
T  12741 gagtcgagttttaaaactatg 12721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 36745750 - 36745970
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36745750 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 36745849  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||    
T  36745850 agtcatccgagtgattccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtactcccgccgaatcgatgacc 36745949  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  36745950 gagccgagttttaaaactatg 36745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 40144124 - 40143904
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40144124 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 40144025  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |  | |||| ||||||||||||    
T  40144024 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgactcagtttctccgccgagtcgatgacc 40143925  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  40143924 gagccgagttttaaaactatg 40143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 27194655 - 27194875
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27194655 attattttagtttctaaagtgaccgagtcgccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 27194754  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||||| |||||| || ||||||||||||    
T  27194755 agtcatctgagtggttccggttcagtcatgtggttcgaccaatgacacagtggttcaactattgacccattaacccagtaccccagccgagtcgatgacc 27194854  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  27194855 gagccgagttttaaaactatg 27194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 3752677 - 3752454
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3752677 gtcattattttagtttctaaagtgaccgagtcaccgattaaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaa 3752578  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||| ||||||||| |||||||||    
T  3752577 ccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactgcttcgaccattgacccattgacccagtacccccgccgagtcgatg 3752478  T
Q  235 accgagccgagttttaaaactatg 258  Q
    |||||||||| | | |||||||||    
T  3752477 accgagccgattctgaaaactatg 3752454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 38040843 - 38040623
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| || |    
T  38040843 attattttagtttataaagtgaccgagtcaccgattcaatccgagttaatctggttaaataactatataaatttaatctaaggatcgagttatctgactg 38040744  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||||||||    
T  38040743 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacctccgccgaatcgatgacc 38040644  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  38040643 gagccgagttttaaaactatg 38040623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 14635578 - 14635345
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccg----------gttaaataactatataaatttaatctaaggaccg 124  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||          |||| |||||||||||||||||||||||||||||    
T  14635578 gtcattattttagtttctaaagtgaccgagtcaccgattaaatccgagttaatccgagttaatccggttatataactatataaatttaatctaaggaccg 14635479  T
Q  125 agttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  14635478 agttatctaaccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcgaccattgacccattgacccagtacccccgc 14635379  T
Q  225 tgagtcgatgaccgagccgagttttaaaactatg 258  Q
     ||||||||||||||||||| | | |||||||||    
T  14635378 cgagtcgatgaccgagccgattctgaaaactatg 14635345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 8760987 - 8761197
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||| |          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8760987 attattttagtttctaaagtgaccgagtcaccgagt----------taatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 8761076  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  8761077 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacctattgacccagtacccccgccgagtcgatgacc 8761176  T
Q  238 gagccgagttttaaaactatg 258  Q
    || ||||||||||||||||||    
T  8761177 gatccgagttttaaaactatg 8761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 35758245 - 35758035
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35758245 attattttagtttctaaagtgaccgtgtcactgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 35758146  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||          ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||||    
T  35758145 ag----------ggttccgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccactgacccagtacctccgccgagtcgatgacc 35758056  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  35758055 gagccgagttttaaaactatg 35758035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 26166090 - 26166256
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| ||| |||||||||||||||| | ||| | | ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  26166090 gtcattattttagtttttaaagtgaccgagtcatcaatttagtacgagttaatccgatttaataactatataaatttaatctaaggaccgagttatctaa 26166189  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattg 201  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  26166190 ccgagtcatccgagtggttctggttcagtcatgcggttcgaccaatgactcagtggttcgactattg 26166256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 53 - 206
Target Start/End: Complemental strand, 29293511 - 29293358
Alignment:
Q  53 aaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggt 152  Q
    |||||||| ||||||| |||||||||| | |||||||||||||||| ||||||||||||||||| | |||||||||||| || |||||||||||||| |     
T  29293511 aaagtgactgagtcactgattcaatccaatttaatccggttaaatatctatataaatttaatctcaagaccgagttatccaagcgagtcatccgagttga 29293412  T
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccca 206  Q
    ||| ||| ||||||| ||||||||||||||| || |||||| ||||||||||||    
T  29293411 tccagtttagtcatgcggttcgaccaatgacccaatggttcaaccattgaccca 29293358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 71 - 258
Target Start/End: Complemental strand, 6273315 - 6273128
Alignment:
Q  71 attcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtgg 170  Q
    ||||||||||| |||||| |||| ||||  |||| ||||||||||| | | |||||| |||||||||||| || ||  | | ||||||||||||||  ||    
T  6273315 attcaatccgatttaatctggttcaatacatataaaaatttaatcttaaggccgagtcatctaaccgagttattcggtttgatccggttcagtcatacgg 6273216  T
Q  171 ttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||| ||||||||||||||||||||| ||||| | ||||| | |||| || |||||||||||||||||||||||||||||||||    
T  6273215 ttcgaccattgactcagtggttcgaccattaacccaataacccagtgcccctgccgagtcgatgaccgagccgagttttaaaactatg 6273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 17644142 - 17644309
Alignment:
Q  91 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtgg 190  Q
    |||||||| ||||| | ||||||||| | |||||||| || ||||||||| |||||| |   |||| ||||||||||||||||||||| |||  ||||||    
T  17644142 gttaaatacctataaatatttaatcttaagaccgagtcatttaaccgagttatccgatttaatccgattcagtcatgtggttcgaccattgatccagtgg 17644241  T
Q  191 ttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||| |||||| |||||||  | || |||||||||||| |||||||||||||||||    
T  17644242 ttcgaccattgacccagtgacccgatacccctaccgaatcgatgaccgagtcgagttttaaaactatg 17644309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 257
Target Start/End: Original strand, 39051843 - 39052036
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||| | ||||||| ||||||||||||| || | ||| | |  |||||||    
T  39051843 agtcaccgattaaatccgatttaatccagttaaatagctatataaatttaatcttaagaccgagatatctaaccgagttattcaagttgatatggttcag 39051942  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    ||||| ||||||| |||||| ||||| ||||||||||||| ||| |||||  ||||||| |||| || ||||| | | |||| ||||||||||||    
T  39051943 tcatgcggttcgaacaatgattcagtagttcgaccattga-ccagtgaccttatacccctgctgtgttgatgatcaaaccgaattttaaaactat 39052036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 14351875 - 14352041
Alignment:
Q  92 ttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggt 191  Q
    ||||||| ||||| ||||||||||| | ||||| || || ||||||||| |||||  |   |||| |||||||||| ||||| || ||||||||||||||    
T  14351875 ttaaatacctataaaaatttaatcttaagaccgggtcatataaccgagttatccggtttaatccgattcagtcatgcggttcaactaatgactcagtggt 14351974  T
Q  192 tcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||| || || ||| ||||| ||||  | |||||||||||||||||||||||||||||||||    
T  14351975 tcgaccattaactcactgatccaatgcccctaccgagtcgatgaccgagccgagttttaaaactatg 14352041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 29823362 - 29823257
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| ||||||| |||||| ||| ||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  29823362 tccggttcagttatgcggttcgatcaatgattcactggttcgaccattgacctagtgacccagtacccccgccgagtcgatgaccgagccgaattttaaa 29823263  T
Q  253 actatg 258  Q
    ||||||    
T  29823262 actatg 29823257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 13957035 - 13956932
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||||| || |||||||||| ||||   || |||||||||||||||||||||||||||    
T  13957035 tccggttcagtcatgcggttcaaccagtgactcagtggttcgaccattaactcattgacccagtacctatgccgagtcgatgaccgagccgagttttaaa 13956936  T
Q  253 acta 256  Q
    ||||    
T  13956935 acta 13956932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 18942416 - 18942249
Alignment:
Q  91 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtgg 190  Q
    |||||||| ||||| | ||||||||| | |||||||| || |||| |||| |||||| |   |||| |||||||||| ||||| |||| | |  ||||||    
T  18942416 gttaaatacctataaatatttaatcttaagaccgagtcatttaactgagttatccgatttaatccgattcagtcatgcggttcaaccagtcatccagtgg 18942317  T
Q  191 ttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||| ||||||  ||||||  | |||||||||||||||||||||||||||||||||    
T  18942316 ttcgaccattgacccagtgacccggtacccctaccgagtcgatgaccgagccgagttttaaaactatg 18942249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 35456674 - 35456507
Alignment:
Q  91 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtgg 190  Q
    |||||||| ||||| | ||||||||| | |||| ||| || ||||||||| |||||  |   |||| |||||||||| ||||| |||| |||||||||||    
T  35456674 gttaaatacctataaatatttaatcttaagaccaagtcatttaaccgagttatccggtttaatccgattcagtcatgcggttcaaccagtgactcagtgg 35456575  T
Q  191 ttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||| ||| ||| ||| ||||||  |  ||| ||||||||||||||||||||||||||||    
T  35456574 ttcgaccattgatccaatgaaccagtacccctcccaagttgatgaccgagccgagttttaaaactatg 35456507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 258
Target Start/End: Complemental strand, 6459905 - 6459707
Alignment:
Q  60 ccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggtt 159  Q
    |||||||| || ||| ||||||  ||||| ||||||||| ||||| ||||||||| | |  |||| || || | ||||||| ||| |  |   |||| ||    
T  6459905 ccgagtcatcggttcgatccgatctaatctggttaaatacctataaaaatttaatattaacaccgggtcatatgaccgagttatctggtttaatccgatt 6459806  T
Q  160 cagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||| ||||| |||| |||| |||||||||||||||| || |||||||||| |||||  || ||||||| |||||||| ||||||||||||||||    
T  6459805 cagtcatgcggttcaaccagtgacccagtggttcgaccattaactcattgacccagtacccatgccgagtcgacgaccgagctgagttttaaaactatg 6459707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 57 - 258
Target Start/End: Original strand, 32383790 - 32383991
Alignment:
Q  57 tgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 156  Q
    ||||||||||| || ||||||| || |||||| | ||||||| ||||| |||||||||||   ||||| || |||| ||||||| || ||  |   |||     
T  32383790 tgaccgagtcatcggttcaatctgatttaatctgattaaatacctataaaaatttaatcttgagaccgggtcatcttaccgagttattcggtttaatcca 32383889  T
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
     |||||||||| ||||| ||||||||| ||||||||| | |||| ||| | ||||||| || |||    |||||||||||||||||||||||||||||||    
T  32383890 attcagtcatgcggttcaaccaatgacacagtggttcaatcattaacctagtgacccagtatccctatcgagtcgatgaccgagccgagttttaaaacta 32383989  T
Q  257 tg 258  Q
    ||    
T  32383990 tg 32383991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 389619 - 389692
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||| |||| ||||||| ||||||||||||||||||| |||||||||||||| | |||| ||||||||||    
T  389619 cgagtcacggattaaatccgatttaatccggttaaataactgtataaatttaatctcaagaccaagttatctaa 389692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 6514364 - 6514413
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaat 87  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  6514364 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaat 6514413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 17421380 - 17421303
Alignment:
Q  181 gactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||| || |||| || ||| ||||||||||    |||||||||||||||||||||||||||||||||    
T  17421380 gactcagtggttcgatcaatgactcaatgatccaatacccctctcgagtcgatgaccgagccgagttttaaaactatg 17421303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 389696 - 389758
Alignment:
Q  197 cattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    |||||||||| ||||| | |||||| || || |||||||||||||||||||||||||||||||    
T  389696 cattgacccagtgacctagtacccctgccgaatcgatgaccgagccgagttttaaaactatgt 389758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 43581683 - 43581785
Alignment:
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    |||||||||||| |||||||| ||||| |||||||||| |||| |||||||||||| || ||| |   | |||||||||||||  |||  ||||||||||    
T  43581683 ggttcagtcatgcggttcgactaatgattcagtggttcaaccaatgacccattgactcagtactcttaccgagtcgatgaccggtccggtttttaaaact 43581782  T
Q  256 atg 258  Q
    |||    
T  43581783 atg 43581785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 23015136 - 23015033
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaac 254  Q
    ||||||||||||| ||||| ||||||||| || ||||||||||| |||| || ||||||| |||     | ||||||||| |||| |||| |||||||||    
T  23015136 cggttcagtcatgcggttcaaccaatgacccaatggttcgaccaatgactcagtgacccagtactttgaccgagtcgatgtccgatccgatttttaaaac 23015037  T
Q  255 tatg 258  Q
    ||||    
T  23015036 tatg 23015033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 33112208 - 33112309
Alignment:
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    |||||||||||  |||| | |||||||||||| |||||| |||| | ||| | || || | |||| || || |||| |||||||||||||||||||||||    
T  33112208 gttcagtcatgcagttcaatcaatgactcagtagttcgatcattaatccaataactcagtgcccctgccgaatcgacgaccgagccgagttttaaaacta 33112307  T
Q  257 tg 258  Q
    ||    
T  33112308 tg 33112309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 814803 - 814876
Alignment:
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||| ||| ||| || ||   | |||||||| ||||| | ||||||||||||||||    
T  814803 cagtggttcgaccattgacccagtgatccagtatccttaccgagtcgatcaccgatctgagttttaaaactatg 814876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5583103 - 5583136
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  5583103 ctatttaattgcttttgggtaacggggtgttaca 5583136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15460755 - 15460722
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  15460755 ctatttaattgcttttgggtaacggggtgttaca 15460722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18895820 - 18895853
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  18895820 ctatttaattgcttttgggtaacggggtgttaca 18895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 20339878 - 20339845
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  20339878 tatttaattgcttttgggtaacggggtgttacag 20339845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30780352 - 30780319
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  30780352 ctatttaattgcttttgggtaacggggtgttaca 30780319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37540840 - 37540873
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  37540840 ctatttaattgcttttgggtaacggggtgttaca 37540873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37548384 - 37548417
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  37548384 ctatttaattgcttttgggtaacggggtgttaca 37548417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40011797 - 40011830
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  40011797 ctatttaattgcttttgggtaacggggtgttaca 40011830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 41046683 - 41046752
Alignment:
Q  189 ggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||| ||||| || |||| |  ||||||| | |||||||| ||||||||||||||||||| ||||    
T  41046683 ggttcgaccgttgactcagtgactcggtacccccaccgagtcgattaccgagccgagttttaaaattatg 41046752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43028325 - 43028292
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  43028325 ctatttaattgcttttgggtaacggggtgttaca 43028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 19801150 - 19801182
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  19801150 tatttaattgcttttgggtaacggggtgttaca 19801182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 20346472 - 20346440
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  20346472 tatttaattgcttttgggtaacggggtgttaca 20346440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 22500278 - 22500246
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  22500278 tatttaattgcttttgggtaacggggtgttaca 22500246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 22506856 - 22506824
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  22506856 tatttaattgcttttgggtaacggggtgttaca 22506824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25845627 - 25845595
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  25845627 tatttaattgcttttgggtaacggggtgttaca 25845595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25852262 - 25852230
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  25852262 tatttaattgcttttgggtaacggggtgttaca 25852230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 6e-93; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 23611420 - 23611640
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23611420 attattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccagttaaataactatataaatttaatctaaggaccgagttatctaaccg 23611519  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||| |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||    
T  23611520 agttatccgagtggtttcgattcagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattaacccagtatccccgccgagtcgatgacc 23611619  T
Q  238 gagccgagttttaaaactatg 258  Q
    || ||||||||||||||||||    
T  23611620 gaaccgagttttaaaactatg 23611640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 55497672 - 55497461
Alignment:
Q  39 ttattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccga 138  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55497672 ttattttagtttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccga 55497573  T
Q  139 gtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccg 238  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||        |||| ||  ||||| |||| ||||||||    
T  55497572 gtcatccgagtggttccgattcagtcatgcggttcgatcaatgactcagtggttcgaccattga--------cccagtattcccgccgagttgatgaccg 55497481  T
Q  239 agccgagttttaaaactatg 258  Q
    ||||||||||||||||||||    
T  55497480 agccgagttttaaaactatg 55497461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 11792594 - 11792384
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| |||||||||||||||| ||||||||||||||||          |||||||||||||||||||||| ||||||||||||||||||||||||    
T  11792594 attattttagtttctaaagtgaccgactcaccgattcaatccg----------gttaaataactatataaatttattctaaggaccgagttatctaaccg 11792505  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  11792504 agtcatccgagtggttccgattcagtcatgcggttcgaccaatgattcagtggttcgaccattgacccattgacccagtatccccgccgagtcgatgacc 11792405  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  11792404 gagccgagttttaaaactatg 11792384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 7648245 - 7648075
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7648245 gtcattattttagtttctaaagtgaccgagtcaccaattcaatccgagttaatccggttatataactatataaatttaatctaaggaccgagttatctaa 7648146  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgaccc 205  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7648145 ccgagtcatccgagtggttccggttcagtcatgcggttcgaccaatgactcactggttcgaccattgaccc 7648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 1936413 - 1936610
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| | ||||||||    
T  1936413 cgagtcaccgattaaatccgatttaatccggttaaatagctatataaatttaatctcaagaccgagttatctaaccgagccatccgagttgatccggttc 1936512  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||| || ||||||||||||||    
T  1936513 agtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccctgccgagtcgatgaccgagtcgggttttaaaactatg 1936610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 25232594 - 25232774
Alignment:
Q  78 ccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgacc 177  Q
    |||| |||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||    
T  25232594 ccgatttaatctggttaaatatctatataaatttaatctcaagaccgagttatctaaccgagccatccgagttgatccggttcagtcatgcggttcgacc 25232693  T
Q  178 aatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  25232694 aatgactcagtggttcgaccattgacccattgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 25232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 63 - 259
Target Start/End: Original strand, 12704564 - 12704760
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||    
T  12704564 agtcaccgattaaatccgatttaatccggttaaatagttatataaatttaatctcaagaccgagttatctaaccgagtcatccgagttgatccggttcag 12704663  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    | ||| ||||||| |||||||||||||||||||||||||||  | ||||||| |||||  ||  |||||||||||||||||||||||||||||||||    
T  12704664 taatgcggttcgatcaatgactcagtggttcgaccattgacttagtgacccagtacccatgcctagtcgatgaccgagccgagttttaaaactatgt 12704760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 55675617 - 55675420
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||| ||||| |||| || ||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||| ||| |||||   |||||||     
T  55675617 cgagtcatcgattaaatctgatttaatccagttaaatagctatataaatttaatctcaagaccgagttatctaaccgagccattcgagttaatccggttt 55675518  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||| || ||||||||||||||||||||| |||||||||||||| ||||||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  55675517 agtcttgcggttcgaccaatgactcagtgattcgaccattgacctattgacccagtacccctgtcgagtcgatgaccgagccgagttttaaaactatg 55675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 8260925 - 8261139
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||          |||||||  |||||||||||||||| | ||||||||||| |||    
T  8260925 gtcattattttcgtttttaaagtgaccgagtcaccgattcaatccga----------ttaaatagttatataaatttaatctcaagaccgagttatgtaa 8261014  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
     |||||||||||||| | ||||||| |||||||||||| |||||||||| || |||||| |||||||||||| |||| ||  |||||  | ||||| |||    
T  8261015 tcgagtcatccgagttgatccggtttagtcatgtggtttgaccaatgacccaatggttcaaccattgacccagtgactcagcacccctaccgagtcaatg 8261114  T
Q  235 accgagccgagttttaaaactatgt 259  Q
     || |||||||||||||||||||||    
T  8261115 tccaagccgagttttaaaactatgt 8261139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 8274342 - 8274556
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaa 134  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||          |||||||  |||||||||||||||| | ||||||||||| |||    
T  8274342 gtcattattttcgtttttaaagtgaccgagtcaccgattcaatccga----------ttaaatagttatataaatttaatctcaagaccgagttatgtaa 8274431  T
Q  135 ccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatg 234  Q
     |||||||||||||| | ||||||| |||||||||||| |||||||||| || |||||| |||||||||||| |||| ||  |||||  | ||||| |||    
T  8274432 tcgagtcatccgagttgatccggtttagtcatgtggtttgaccaatgacccaatggttcaaccattgacccagtgactcagcacccctaccgagtcaatg 8274531  T
Q  235 accgagccgagttttaaaactatgt 259  Q
     || |||||||||||||||||||||    
T  8274532 tccaagccgagttttaaaactatgt 8274556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 53 - 258
Target Start/End: Original strand, 28359573 - 28359778
Alignment:
Q  53 aaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggt 152  Q
    |||||||| |||||||  |||||||  || |||||| ||||||||| ||||||||||| |||||   ||||||| ||| |||||||||||||||||| |     
T  28359573 aaagtgactgagtcactaattcaatttgatttaatctggttaaatacctatataaattaaatctttagaccgagatatttaaccgagtcatccgagttga 28359672  T
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    || | |||||||||| ||||| | ||||||  || |||||||| |||||||||| |||||||||||| | || ||||| |||||||||||||||||||||    
T  28359673 tctgattcagtcatgcggttcaatcaatgatccaatggttcgatcattgacccagtgacccaatacctctgccgagtcaatgaccgagccgagttttaaa 28359772  T
Q  253 actatg 258  Q
    ||||||    
T  28359773 actatg 28359778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 4414582 - 4414415
Alignment:
Q  91 gttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtgg 190  Q
    |||||||| ||||| | ||||||||| | |||||||| || ||| ||||| |||||  |   |||| |||||||||| ||||| || | |||||||||||    
T  4414582 gttaaatacctataaatatttaatcttaagaccgagtcatttaatcgagttatccggtttaatccgattcagtcatgcggttcaacaagtgactcagtgg 4414483  T
Q  191 ttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  4414482 ttcgaccattgacccagtgacccagtacccctgccgagtcgatgaccgagccgagttttaaaactatg 4414415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 259
Target Start/End: Complemental strand, 44352282 - 44352086
Alignment:
Q  63 agtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcag 162  Q
    |||||||| || ||||||| |||||| | ||||||| ||||| |||||||||||||  |||| ||||||| |||||||||||||  | | || | |||||    
T  44352282 agtcaccggtttaatccgatttaatctgattaaatacctatacaaatttaatctaaacaccgggttatcttaccgagtcatccggtttgatctgattcag 44352183  T
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    ||||| ||||| |||| |||| || |||||||||||| ||| || ||||||| ||||   || |||||||||||||| |||||||||||||||||||    
T  44352182 tcatgcggttcaaccagtgacccaatggttcgaccatcgactcagtgacccagtacctatgccgagtcgatgaccgaaccgagttttaaaactatgt 44352086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 24394175 - 24394072
Alignment:
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    |||||||| ||||| |||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |    
T  24394175 ggttcagttatgtgattcgaccaataactcactggttcgaccattgacccagtgacccagtacccccgccgagtcgatgaccgagccgagttttaaaatt 24394076  T
Q  256 atgt 259  Q
    ||||    
T  24394075 atgt 24394072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 24776120 - 24776269
Alignment:
Q  109 tttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccatt 208  Q
    ||||||||||  |||| |||||||||||||||||||||| | | |||| ||||| ||||  |||| ||||||||  ||||||||||||||| |||||| |    
T  24776120 tttaatctaaacaccgtgttatctaaccgagtcatccgatttgatccgattcagccatgcagttcaaccaatgatccagtggttcgaccatcgacccagt 24776219  T
Q  209 gacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||| |  | ||||||||| |||||||||||||||||||||||    
T  24776220 gacccaatacctctaccgagtcgatggccgagccgagttttaaaactatg 24776269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 261
Target Start/End: Complemental strand, 8132995 - 8132788
Alignment:
Q  54 aagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggtt 153  Q
    ||||| ||||||||  | |||||| ||| |||||  || |||||| ||||| ||||||||||  |  ||||||| | ||| |||||| |||||  |   |    
T  8132995 aagtggccgagtcattggttcaattcgatttaatatggataaatatctataaaaatttaatcctattaccgagtcaactagccgagttatccggtttaat 8132896  T
Q  154 ccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaa 253  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||| || || ||||||| |||| |  | ||||||||||||||||||||||||||||    
T  8132895 ccggttcagtcatgcggttcaaccaatgactcagtggttcaaccattaactcagtgacccagtacctctaccgagtcgatgaccgagccgagttttaaaa 8132796  T
Q  254 ctatgtat 261  Q
    ||||||||    
T  8132795 ctatgtat 8132788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 54822244 - 54822047
Alignment:
Q  61 cgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttc 160  Q
    ||||||| |||||||||  || |||||   ||||||||  |||| |||||||| || | ||||||||  |||| |||||| |||||| |   || | |||    
T  54822244 cgagtcatcgattcaatatgatttaatatagttaaatacttatacaaatttaaccttaagaccgagtgttctacccgagttatccgatttaatctgtttc 54822145  T
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||| ||||| |||| |||||||||||||||| ||||||| || ||||||| ||| || || |||||||||||||||||||||||||||||||||    
T  54822144 agtcatgcggttcaaccagtgactcagtggttcgatcattgactcagtgacccagtacacctgccgagtcgatgaccgagccgagttttaaaactatg 54822047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 19916433 - 19916534
Alignment:
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
    ||||||||||| ||||| ||||| || ||||||||||||||||| | ||| ||||||| |||| | |||| |||||||||||||||||||||||||||||    
T  19916433 gttcagtcatgcggttcaaccaacgattcagtggttcgaccattaatccaatgacccagtacctctgctgtgtcgatgaccgagccgagttttaaaacta 19916532  T
Q  257 tg 258  Q
    ||    
T  19916533 tg 19916534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 32988247 - 32988342
Alignment:
Q  163 tcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| |||||||||||||||||||||||||||||| ||||| | ||||||| ||||| | | ||||||||| |||  ||||||||||||||||||    
T  32988247 tcatgcggttcgaccaatgactcagtggttcgaccaatgacctagtgacccactaccctcaccgagtcgatggccggtccgagttttaaaactatg 32988342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 29695316 - 29695535
Alignment:
Q  38 attattttaatttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccg 137  Q
    ||||||||| ||| |  ||||||| |||||||| || ||||| | |||||| | ||||||| ||||| |||||||||||||  |||| ||||||| ||||    
T  29695316 attattttagtttttgcagtgacc-agtcaccggtttaatccaatttaatctgattaaatacctatacaaatttaatctaaacaccgggttatcttaccg 29695414  T
Q  138 agtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgacc 237  Q
    |||||||||  | | || | ||| | |||| ||||| |||| |||| || |  ||||||||| ||| || ||||||| || |   |  ||||||||||||    
T  29695415 agtcatccggtttgatctgattcggccatgcggttcaaccagtgacccaataattcgaccatcgactcagtgacccagtatctatgtcgagtcgatgacc 29695514  T
Q  238 gagccgagttttaaaactatg 258  Q
    |||||||||||||||||||||    
T  29695515 gagccgagttttaaaactatg 29695535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 2859507 - 2859416
Alignment:
Q  170 gttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgtat 261  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||||||   | |||||||| ||||  | |||||||||||||||||||    
T  2859507 gttcgaccagtgacccagtggttcgaccattgacccagtgacccaatacccttaccgagtcgatcaccggtctgagttttaaaactatgtat 2859416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 6354968 - 6355073
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||| ||||| || | ||||||| ||||||||||||| ||||| |||| ||  ||| |    |||||||||||||||||||||||||||    
T  6354968 tccggttcagtcatgcggttcaactattgactcaatggttcgaccattaacccagtgactcagaacctctatcgagtcgatgaccgagccgagttttaaa 6355067  T
Q  253 actatg 258  Q
    ||||||    
T  6355068 actatg 6355073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 43245714 - 43245819
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||| ||| ||||| |||| | ||||| ||||||||||||| ||||| |||||||||||||| |  ||||||||  ||||| ||| |||||||    
T  43245714 tccggttcagttatgcggttcaaccagtaactcaatggttcgaccattaacccagtgacccaatacccctgtcgagtcgatagccgagtcgaattttaaa 43245813  T
Q  253 actatg 258  Q
    ||||||    
T  43245814 actatg 43245819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 258
Target Start/End: Complemental strand, 2039213 - 2039082
Alignment:
Q  127 ttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctg 226  Q
    ||||||||||| ||||||||| |   ||||||||||| ||| ||||| |||| ||||||||||||||||||  |||| ||||||||||||| ||   | |    
T  2039213 ttatctaaccgggtcatccgatttaatccggttcagtaatgaggttcaaccagtgactcagtggttcgaccgatgactcattgacccaataaccttaccg 2039114  T
Q  227 agtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||| | || |  |||||||||||||    
T  2039113 agtcgatgactgggcaggtttttaaaactatg 2039082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 26203643 - 26203780
Alignment:
Q  121 accgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    |||||||||| ||| |||||||||||  |   |||| ||||||||||  |||| |||||||||||  ||||||||||||  || || ||||||| | ||     
T  26203643 accgagttatttaatcgagtcatccggtttaatccgattcagtcatgcagttcaaccaatgactcgatggttcgaccatccactcagtgacccagtgcct 26203742  T
Q  221 ccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    | |  |||||||||| ||||||||||||||||||||||    
T  26203743 ctgtcgagtcgatgatcgagccgagttttaaaactatg 26203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 38519389 - 38519287
Alignment:
Q  156 ggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaact 255  Q
    |||| ||||||| ||||| |||| ||||||| ||||||||||||| ||||| ||||||||||||   |   ||||||||   ||||||||||||||||||    
T  38519389 ggttaagtcatgcggttcaaccagtgactcaatggttcgaccattaacccagtgacccaatacctttgtcaagtcgatggttgagccgagttttaaaact 38519290  T
Q  256 atg 258  Q
    |||    
T  38519289 atg 38519287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 38465268 - 38465206
Alignment:
Q  158 ttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaataccc 220  Q
    |||||||||| ||||||||||||||||||||| ||| |||| ||||||| |||| || |||||    
T  38465268 ttcagtcatgcggttcgaccaatgactcagtgattcaaccaatgacccaatgactcagtaccc 38465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 5360672 - 5360585
Alignment:
Q  170 gttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactat 257  Q
    |||||| ||||||  ||||||||||||||||||  || ||| |||||||| |  | |||||||| |||||  ||||||||||||||||    
T  5360672 gttcgatcaatgatccagtggttcgaccattgattcagtgaaccaatacctctaccgagtcgattaccgattcgagttttaaaactat 5360585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 258
Target Start/End: Complemental strand, 7362322 - 7362121
Alignment:
Q  55 agtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttc 154  Q
    |||| |||||||| || |||||||||| |||||| ||||||||| ||||  ||||||||||| | |  ||| | |||||| ||||| || ||  |   ||    
T  7362322 agtggccgagtcatcggttcaatccgatttaatctggttaaatatctattgaaatttaatcttatg-tcgaatcatctaatcgagttattcggtttaatc 7362224  T
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaac 254  Q
      ||||| ||||| ||||| |||||||| | ||||||||||||||| |  || ||| ||||||||   |  |||||||||||||| || |||||||||||    
T  7362223 tagttcaatcatgcggttcaaccaatgatttagtggttcgaccatt-aatcagtgatccaatacctttgtcgagtcgatgaccgaaccaagttttaaaac 7362125  T
Q  255 tatg 258  Q
    ||||    
T  7362124 tatg 7362121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 52499834 - 52499799
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacagt 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  52499834 ctatttaattgcttttgggtaacggggtgttacagt 52499799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 9374912 - 9374878
Alignment:
Q  35 gtcattattttaatttctaaagtgaccgagtcacc 69  Q
    |||||||||||| ||||||||||||||||||||||    
T  9374912 gtcattattttagtttctaaagtgaccgagtcacc 9374878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 390408 - 390375
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  390408 ctatttaattgcttttgggtaacggggtgttaca 390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3260790 - 3260823
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  3260790 ctatttaattgcttttgggtaacggggtgttaca 3260823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 258
Target Start/End: Complemental strand, 9321044 - 9321015
Alignment:
Q  229 tcgatgaccgagccgagttttaaaactatg 258  Q
    ||||||||||||||||||||||||||||||    
T  9321044 tcgatgaccgagccgagttttaaaactatg 9321015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 25510576 - 25510487
Alignment:
Q  169 ggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    ||||| ||||||||| ||||||||| |||| ||| ||| |||||||  ||||   | ||||||| |||||  ||||||||||||||||||    
T  25510576 ggttcaaccaatgacccagtggttcaaccaatgaaccagtgacccagcacccttaccgagtcgacgaccggtccgagttttaaaactatg 25510487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 1583191 - 1583159
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  1583191 tatttaattgcttttgggtaacggggtgttaca 1583159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 34856104 - 34856052
Alignment:
Q  161 agtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgaccc 213  Q
    ||||||| ||||| ||||||||  ||||||||||||||||||| || ||||||    
T  34856104 agtcatgcggttcaaccaatgatccagtggttcgaccattgactcagtgaccc 34856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 52119 - 51909
Alignment:
Q  48 tttctaaagtgaccgagtcaccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccga 147  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||    
T  52119 tttctaaagtgaccgagtcaccgattcaatccgagttaatccggttaaatatcaatacaaatttaatctaaggaccgaattatctaaccgagtcatccga 52020  T
Q  148 gtggttccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagtt 247  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  52019 gtggttccggttcagtcatgcggtttgaccaatgactctgtggttcgaccattgactcattgacccagtacccccgccgagtcgatgaccgagccgagtt 51920  T
Q  248 ttaaaactatg 258  Q
    |||||||||||    
T  51919 ttaaaactatg 51909  T

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Target: scaffold0231 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 10935 - 11136
Alignment:
Q  58 gaccgagtca-ccgattcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 156  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10935 gaccgagtcatccgatttaatccgagttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccg 11034  T
Q  157 gttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaacta 256  Q
     || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11035 atttagtcatgcggttcgaccaatgactcagtggttcgaccattgacccattgacccagtacccccgccgagtcgatgaccgagccgagttttaaaacta 11134  T
Q  257 tg 258  Q
    ||    
T  11135 tg 11136  T

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Target: scaffold0242 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 258
Target Start/End: Original strand, 17782 - 17955
Alignment:
Q  85 aatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatgact 184  Q
    |||||||||||||| ||||||||||| |||||   ||||||||||| ||||||| |||||||||| | || |||||||||||| ||||| ||||||||||    
T  17782 aatccggttaaatacctatataaattgaatctctagaccgagttatttaaccgaatcatccgagttgatctggttcagtcatgcggttcaaccaatgact 17881  T
Q  185 cagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    || ||||||||||||| ||||| |||| || |||||| || ||||  |||  ||||| ||||||||||||||||    
T  17882 caatggttcgaccattaacccaatgactcagtacccctgccgagtgaatggtcgagctgagttttaaaactatg 17955  T

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Target: scaffold0116 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 7944 - 7839
Alignment:
Q  153 tccggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaa 252  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||| |||| || ||||   || |||||||||||||||||||||||||||    
T  7944 tccggttcagtcatgcggttcaaccaacgactcagtggttcgaccattaacccaatgactcagtacctttgccgagtcgatgaccgagccgagttttaaa 7845  T
Q  253 actatg 258  Q
    ||||||    
T  7844 actatg 7839  T

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Target: scaffold0043 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 259
Target Start/End: Complemental strand, 64520 - 64344
Alignment:
Q  83 ttaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggttcgaccaatga 182  Q
    |||||| | ||||||| ||||| ||||||||| |||  |||| ||||||| | |||||||||||  | | |||| |||||||||| ||||| |||| |||    
T  64520 ttaatctgattaaatatctatacaaatttaatttaaacaccgggttatcttatcgagtcatccggtttgatccgattcagtcatgcggttcaaccagtga 64421  T
Q  183 ctcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    | || |||||||||||| ||| || ||||||| ||||   |  ||||||||||||||||||||||||||||||||||    
T  64420 cccaatggttcgaccatcgactcagtgacccagtacctatgtcgagtcgatgaccgagccgagttttaaaactatgt 64344  T

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Target: scaffold0712 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 259
Target Start/End: Original strand, 4845 - 5031
Alignment:
Q  72 ttcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggt 171  Q
    |||||||||| |||||| ||||||||| ||||| ||||||||||| | |||||  | ||||||| |||| ||  |  |   || | |||||||| | ||     
T  4845 ttcaatccgatttaatctggttaaatacctataaaaatttaatcttaagaccggatcatctaactgagttatttggtttaatctgattcagtcaagcggc 4944  T
Q  172 tcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    |||||||  |||||||||||||||||||| ||| | |||||||| ||||   | ||||||||||||||||||||||||||||||||||    
T  4945 tcgaccagcgactcagtggttcgaccattaaccgagtgacccaacaccctacc-gagtcgatgaccgagccgagttttaaaactatgt 5031  T

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Target: scaffold0709 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 259
Target Start/End: Original strand, 4865 - 5051
Alignment:
Q  72 ttcaatccgaattaatccggttaaataactatataaatttaatctaaggaccgagttatctaaccgagtcatccgagtggttccggttcagtcatgtggt 171  Q
    |||||||||| |||||| ||||||||| ||||| ||||||||||| | |||||  | ||||||| |||| ||  |  |   || | |||||||| | ||     
T  4865 ttcaatccgatttaatctggttaaatacctataaaaatttaatcttaagaccggatcatctaactgagttatttggtttaatctgattcagtcaagcggc 4964  T
Q  172 tcgaccaatgactcagtggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatgt 259  Q
    |||||||  |||||||||||||||||||| ||| | |||||||| ||||   | ||||||||||||||||||||||||||||||||||    
T  4965 tcgaccagcgactcagtggttcgaccattaaccgagtgacccaacaccctacc-gagtcgatgaccgagccgagttttaaaactatgt 5051  T

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Target: scaffold0131 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 7873 - 7932
Alignment:
Q  155 cggttcagtcatgtggttcgaccaatgactcagtggttcgaccattgacccattgaccca 214  Q
    ||||||||||||| | ||| |||||||||||||||||||||||| |||| ||||||||||    
T  7873 cggttcagtcatgcgattcaaccaatgactcagtggttcgaccaatgactcattgaccca 7932  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9230 - 9264
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttacag 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  9230 ctatttaattgcttttgggtaacggggtgttacag 9264  T

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Target: scaffold2150 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2150
Description:

Target: scaffold2150; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 892 - 859
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  892 ctatttaattgcttttgggtaacggggtgttaca 859  T

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Target: scaffold0636 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 1610 - 1541
Alignment:
Q  189 ggttcgaccattgacccattgacccaatacccccgctgagtcgatgaccgagccgagttttaaaactatg 258  Q
    |||||||||| ||||| | ||||||| ||| | | | |||||||||||||  ||||||||||||||||||    
T  1610 ggttcgaccaatgacctagtgacccactacactcaccgagtcgatgaccggtccgagttttaaaactatg 1541  T

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Target: scaffold0320 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 232 - 199
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  232 tatttaattgcttttgggtaacggggtgttacag 199  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31124 - 31157
Alignment:
Q  1 ctatttaattgcttttgggtaacggggttttaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  31124 ctatttaattgcttttgggtaacggggtgttaca 31157  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 24627 - 24660
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  24627 tatttaattgcttttgggtaacggggtgttacag 24660  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 18283 - 18316
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttacag 35  Q
    ||||||||||||||||||||||||||| ||||||    
T  18283 tatttaattgcttttgggtaacggggtgttacag 18316  T

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Target: scaffold1426 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 643 - 675
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  643 tatttaattgcttttgggtaacggggtgttaca 675  T

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Target: scaffold0560 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 1832 - 1864
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  1832 tatttaattgcttttgggtaacggggtgttaca 1864  T

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Target: scaffold0466 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 10539 - 10507
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  10539 tatttaattgcttttgggtaacggggtgttaca 10507  T

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Target: scaffold0407 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 5112 - 5144
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  5112 tatttaattgcttttgggtaacggggtgttaca 5144  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13014 - 13046
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  13014 tatttaattgcttttgggtaacggggtgttaca 13046  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 31215 - 31183
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  31215 tatttaattgcttttgggtaacggggtgttaca 31183  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 63982 - 63950
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  63982 tatttaattgcttttgggtaacggggtgttaca 63950  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 251311 - 251279
Alignment:
Q  2 tatttaattgcttttgggtaacggggttttaca 34  Q
    ||||||||||||||||||||||||||| |||||    
T  251311 tatttaattgcttttgggtaacggggtgttaca 251279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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