View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15038_high_22 (Length: 328)
Name: NF15038_high_22
Description: NF15038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15038_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 21 - 315
Target Start/End: Original strand, 40652074 - 40652367
Alignment:
| Q |
21 |
accggttccattctccgatcactttcccgaccacttccattcctccaatcccgattaactctccgatcatttttattatttccccttttggtgagttttc |
120 |
Q |
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| T |
40652074 |
accggttccattctccgatcactttcccgaccacttccattcctccaatcccgattaactctccgatcatttttattatttccccttttggtgagttt-c |
40652172 |
T |
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| Q |
121 |
atataatcttttgaatttgtttcaatcatgcatgttttcattactctaacatttgatttgtattcagctatagtactcaataacaaagttaacgcaaaat |
220 |
Q |
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| T |
40652173 |
atataatcttttgaatttgtttcaatcatgcatgttttcattactctaacatttgatttgtattcagctatagtactcaataacaaagttaacgcaaaat |
40652272 |
T |
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| Q |
221 |
gtctcgaaagagtggttcgttctcaactagccctactcgctcaaggaataagacaactgggttttcccctcctcctagaccatttcatcctatgc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40652273 |
gtctcgaaagagtggttcgttctcaactagccctactcgctcaaggaataagacaactgggttttcacctcctcctagaccatttcatcctatgc |
40652367 |
T |
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