View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15038_low_35 (Length: 287)
Name: NF15038_low_35
Description: NF15038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15038_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 29547708 - 29547441
Alignment:
| Q |
1 |
tactcaatgagcattcttgtaaaagctctttaaaattctgaacaatgtttagcatcacagaggtttcccccaattttcagtttgagacaataatattaaa |
100 |
Q |
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| T |
29547708 |
tactcaatgagcattcttgtaaaagctctttaaaattctgaacaatgtttagcatcacagaggtttcccccaattttcagtttgagacaataatattaaa |
29547609 |
T |
|
| Q |
101 |
atccccaaatactaaccagttagaattaacatatgacaaattctataaggattttattaaattgcaggtgggatcnnnnnnnnacctttctcaggatgac |
200 |
Q |
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| T |
29547608 |
atccccaaatactaaccagttagaattaacataacacaaattctataaggattttattaaattgcaggtgggatcttttttttacctttctcaggatgac |
29547509 |
T |
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| Q |
201 |
cataaattccgctaactctccaattcagagttagtactatcagttataatcatatagaatatggttta |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29547508 |
cataaattccgctaactctccaattcagagttagtactatcagttataatcatatagaatatggttta |
29547441 |
T |
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